Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40225.t1 | XP_003603670.1 | 100 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 3.10E-263 | 917.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40225.t1 | P46259 | 98.9 | 452 | 4 | 1 | 1 | 451 | 1 | 452 | 6.5e-262 | 904.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40225.t1 | G7J421 | 100.0 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 2.2e-263 | 917.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40225.t1 | MTR_3g110720 | 100.000 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 0.0 | 939 |
MS.gene40225.t1 | MTR_4g097830 | 97.118 | 451 | 13 | 0 | 1 | 451 | 1 | 451 | 0.0 | 914 |
MS.gene40225.t1 | MTR_1g106005 | 97.550 | 449 | 11 | 0 | 1 | 449 | 1 | 449 | 0.0 | 914 |
MS.gene40225.t1 | MTR_8g085980 | 92.874 | 435 | 31 | 0 | 1 | 435 | 1 | 435 | 0.0 | 834 |
MS.gene40225.t1 | MTR_7g085800 | 91.403 | 442 | 38 | 0 | 1 | 442 | 1 | 442 | 0.0 | 829 |
MS.gene40225.t1 | MTR_6g029190 | 83.628 | 452 | 69 | 3 | 1 | 451 | 1 | 448 | 0.0 | 774 |
MS.gene40225.t1 | MTR_2g041670 | 73.942 | 449 | 112 | 2 | 1 | 449 | 1 | 444 | 0.0 | 662 |
MS.gene40225.t1 | MTR_2g041400 | 75.291 | 429 | 101 | 2 | 1 | 429 | 1 | 424 | 0.0 | 646 |
MS.gene40225.t1 | MTR_4g094535 | 42.166 | 434 | 241 | 2 | 1 | 434 | 1 | 424 | 1.08e-125 | 372 |
MS.gene40225.t1 | MTR_8g107250 | 41.372 | 452 | 254 | 3 | 1 | 450 | 1 | 443 | 1.12e-125 | 372 |
MS.gene40225.t1 | MTR_4g017630 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 4.11e-125 | 371 |
MS.gene40225.t1 | MTR_4g019110 | 42.396 | 434 | 240 | 2 | 1 | 434 | 1 | 424 | 1.78e-124 | 369 |
MS.gene40225.t1 | MTR_4g019090 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 2.46e-124 | 369 |
MS.gene40225.t1 | MTR_1g101130 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 6.06e-124 | 368 |
MS.gene40225.t1 | MTR_2g031310 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 6.55e-124 | 367 |
MS.gene40225.t1 | MTR_7g089120 | 41.876 | 437 | 238 | 4 | 1 | 434 | 1 | 424 | 1.43e-123 | 367 |
MS.gene40225.t1 | MTR_3g113970 | 40.503 | 437 | 246 | 3 | 1 | 434 | 1 | 426 | 5.85e-123 | 365 |
MS.gene40225.t1 | MTR_8g098360 | 39.545 | 440 | 256 | 2 | 1 | 440 | 1 | 430 | 4.22e-122 | 363 |
MS.gene40225.t1 | MTR_3g063410 | 97.403 | 154 | 4 | 0 | 252 | 405 | 24 | 177 | 5.14e-110 | 323 |
MS.gene40225.t1 | MTR_3g063410 | 97.101 | 138 | 4 | 0 | 268 | 405 | 1 | 138 | 3.76e-96 | 286 |
MS.gene40225.t1 | MTR_7g117050 | 31.614 | 446 | 282 | 9 | 2 | 433 | 3 | 439 | 1.29e-76 | 247 |
MS.gene40225.t1 | MTR_6g075280 | 42.553 | 94 | 35 | 1 | 355 | 448 | 608 | 682 | 1.30e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40225.t1 | AT4G14960 | 97.105 | 449 | 13 | 0 | 1 | 449 | 1 | 449 | 0.0 | 913 |
MS.gene40225.t1 | AT1G04820 | 96.882 | 449 | 14 | 0 | 1 | 449 | 1 | 449 | 0.0 | 911 |
MS.gene40225.t1 | AT1G50010 | 96.882 | 449 | 14 | 0 | 1 | 449 | 1 | 449 | 0.0 | 911 |
MS.gene40225.t1 | AT5G19780 | 93.793 | 435 | 27 | 0 | 1 | 435 | 1 | 435 | 0.0 | 839 |
MS.gene40225.t1 | AT5G19770 | 93.793 | 435 | 27 | 0 | 1 | 435 | 1 | 435 | 0.0 | 839 |
MS.gene40225.t1 | AT1G64740 | 90.345 | 435 | 42 | 0 | 1 | 435 | 1 | 435 | 0.0 | 813 |
MS.gene40225.t1 | AT4G14960 | 94.103 | 407 | 17 | 1 | 1 | 407 | 1 | 400 | 0.0 | 800 |
MS.gene40225.t1 | AT1G75780 | 41.475 | 434 | 245 | 2 | 1 | 434 | 1 | 425 | 1.56e-126 | 374 |
MS.gene40225.t1 | AT5G62700 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 3.78e-125 | 371 |
MS.gene40225.t1 | AT5G62690 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 3.78e-125 | 371 |
MS.gene40225.t1 | AT1G20010 | 41.475 | 434 | 245 | 2 | 1 | 434 | 1 | 425 | 1.13e-124 | 370 |
MS.gene40225.t1 | AT2G29550 | 41.270 | 441 | 249 | 2 | 1 | 441 | 1 | 431 | 1.82e-124 | 369 |
MS.gene40225.t1 | AT5G12250 | 41.876 | 437 | 238 | 4 | 1 | 434 | 1 | 424 | 2.34e-124 | 369 |
MS.gene40225.t1 | AT4G20890 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 5.35e-124 | 368 |
MS.gene40225.t1 | AT5G23860 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 7.55e-124 | 368 |
MS.gene40225.t1 | AT5G23860 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 7.55e-124 | 368 |
MS.gene40225.t1 | AT5G44340 | 41.705 | 434 | 243 | 3 | 1 | 434 | 1 | 424 | 4.99e-122 | 363 |
MS.gene40225.t1 | AT5G05620 | 32.287 | 446 | 279 | 9 | 2 | 433 | 3 | 439 | 5.54e-78 | 250 |
MS.gene40225.t1 | AT3G61650 | 31.839 | 446 | 281 | 9 | 2 | 433 | 3 | 439 | 1.12e-76 | 247 |
Find 151 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGCGTTTATCTGTTGATTA+TGG | 0.257743 | 3.2:-88720178 | MS.gene40225:CDS |
TACCGGTCTGCAAGGTTTCT+TGG | 0.265637 | 3.2:-88720254 | MS.gene40225:CDS |
ACTGCCTCTTTGAGGTTTGA+TGG | 0.279194 | 3.2:-88719766 | MS.gene40225:CDS |
AATGGTCCTCTTGGTCTTGA+TGG | 0.297222 | 3.2:+88719480 | None:intergenic |
GGCGCGTGGAACATGCTTTC+CGG | 0.314398 | 3.2:+88720571 | None:intergenic |
CATCCCTCACTGCCTCTTTG+AGG | 0.314555 | 3.2:-88719774 | MS.gene40225:CDS |
CAGCCTCCAACTGTTGTTCC+TGG | 0.314809 | 3.2:-88719409 | MS.gene40225:CDS |
TGGTGGAACCGGATCTGGTT+TGG | 0.315781 | 3.2:-88720215 | MS.gene40225:CDS |
GGTGGAACCGGATCTGGTTT+GGG | 0.317975 | 3.2:-88720214 | MS.gene40225:CDS |
TTTGTTGATTGGTGTCCAAC+TGG | 0.322748 | 3.2:-88719454 | MS.gene40225:CDS |
TTGCCGCTGATGAGTTGTTC+AGG | 0.339225 | 3.2:+88720479 | None:intergenic |
TACAGTTATCTGCTAGCTTT+CGG | 0.351362 | 3.2:+88720275 | None:intergenic |
AACACGTTCTTCAGCGAAAC+CGG | 0.356725 | 3.2:-88720596 | MS.gene40225:CDS |
CCTCAATCGCCTTGTCTCTC+AGG | 0.383066 | 3.2:-88719963 | MS.gene40225:intron |
CTGCCTTGAACACGGCATTC+AGG | 0.391474 | 3.2:-88720793 | MS.gene40225:intron |
CGGTCTTGTCTCCAGGCATC+TGG | 0.396008 | 3.2:+88720642 | None:intergenic |
TCTCCAGGCATCTGGCCATC+AGG | 0.405017 | 3.2:+88720650 | None:intergenic |
TGGTTTGGGTTCTCTTCTGT+TGG | 0.405165 | 3.2:-88720200 | MS.gene40225:CDS |
GCCTTCTCAGCAGAGATAAC+AGG | 0.413340 | 3.2:+88719661 | None:intergenic |
CAGCCTGATGGCCAGATGCC+TGG | 0.419485 | 3.2:-88720653 | MS.gene40225:CDS |
CCTCCAACGGTCTTGTCTCC+AGG | 0.420149 | 3.2:+88720635 | None:intergenic |
GTGGGTGGTGGAACCGGATC+TGG | 0.423776 | 3.2:-88720220 | MS.gene40225:CDS |
TTACCTGAATGCCGTGTTCA+AGG | 0.426104 | 3.2:+88720790 | None:intergenic |
GAGGAGGTTGGTGCTGAGTC+TGG | 0.430544 | 3.2:-88719184 | MS.gene40225:CDS |
GGACCATTCAGTTTGTTGAT+TGG | 0.433267 | 3.2:-88719465 | MS.gene40225:CDS |
TTCTTGGTGTTCAATGCTGT+GGG | 0.434584 | 3.2:-88720238 | MS.gene40225:CDS |
CGGCAACAGAAAGCTGTTCA+TGG | 0.435869 | 3.2:+88719635 | None:intergenic |
TGGAACATGCTTTCCGGCAC+CGG | 0.438085 | 3.2:+88720577 | None:intergenic |
AGATCATGCACACAGCCCTT+TGG | 0.440237 | 3.2:+88719368 | None:intergenic |
GTGTTCAATGCTGTGGGTGG+TGG | 0.440766 | 3.2:-88720232 | MS.gene40225:CDS |
CAGTGTGCTCAAGGAGGGAA+TGG | 0.443924 | 3.2:+88720068 | None:intergenic |
TTGGTATGTTGGTGAGGGTA+TGG | 0.447387 | 3.2:-88719263 | MS.gene40225:CDS |
GCGATTGAGGTTGGTGTAAG+TGG | 0.449517 | 3.2:+88719976 | None:intergenic |
AATGCTGTGGGTGGTGGAAC+CGG | 0.451993 | 3.2:-88720226 | MS.gene40225:CDS |
ATCAAACTTATGATCAATCC+TGG | 0.453188 | 3.2:+88719315 | None:intergenic |
GGTTGAAAGGACACTGTTGT+AGG | 0.458409 | 3.2:+88720090 | None:intergenic |
ACGCGCCGTCTTCGTAGATC+TGG | 0.458537 | 3.2:-88720555 | MS.gene40225:CDS |
AACAAACTGAATGGTCCTCT+TGG | 0.460464 | 3.2:+88719471 | None:intergenic |
TCCAGGTCGGAAATGCCTGC+TGG | 0.462149 | 3.2:-88720824 | MS.gene40225:CDS |
TTCGCTGAAGAACGTGTTGA+AGG | 0.462873 | 3.2:+88720601 | None:intergenic |
TGCCGCTGATGAGTTGTTCA+GGG | 0.465671 | 3.2:+88720480 | None:intergenic |
GGCATTTCCGACCTGGATAC+CGG | 0.466918 | 3.2:+88720830 | None:intergenic |
AAAAGCACTGTTGGTGATCT+CGG | 0.470781 | 3.2:+88719615 | None:intergenic |
CCCAGCAGGCATTTCCGACC+TGG | 0.472516 | 3.2:+88720823 | None:intergenic |
GAAAGCATGAAATGGATCCT+AGG | 0.478017 | 3.2:+88719694 | None:intergenic |
CCTGAGAGACAAGGCGATTG+AGG | 0.482372 | 3.2:+88719963 | None:intergenic |
ATGACCACGGGCGAAGTTGT+TGG | 0.484462 | 3.2:+88720445 | None:intergenic |
GCACACAGCCCTTTGGACCT+TGG | 0.485066 | 3.2:+88719375 | None:intergenic |
CATTGGTCAAGCCGGTATCC+AGG | 0.488348 | 3.2:-88720841 | MS.gene40225:CDS |
AGGGTCACACTTGGCCATCA+TGG | 0.489886 | 3.2:+88719582 | None:intergenic |
CGTACGAGGAAAGCATGAAA+TGG | 0.493705 | 3.2:+88719686 | None:intergenic |
GGTGATGGAGATGATGTTGA+TGG | 0.495196 | 3.2:-88719163 | MS.gene40225:CDS |
GTCATTGACGAAGTCAGAAC+CGG | 0.497007 | 3.2:-88720524 | MS.gene40225:CDS |
GAGGTAGAAACCTGGGGAGA+TGG | 0.498412 | 3.2:+88720124 | None:intergenic |
GTGCATTGGTATGTTGGTGA+GGG | 0.501347 | 3.2:-88719268 | MS.gene40225:CDS |
TTTCTTGGTGTTCAATGCTG+TGG | 0.502010 | 3.2:-88720239 | MS.gene40225:CDS |
CTGACTTCGTCAATGACGGT+TGG | 0.504857 | 3.2:+88720530 | None:intergenic |
TACCGTTTATCCATCTCCCC+AGG | 0.505210 | 3.2:-88720134 | MS.gene40225:CDS |
AAGAGAACCCAAACCAGATC+CGG | 0.505914 | 3.2:+88720207 | None:intergenic |
TGCTCTCGAGAAGGATTATG+AGG | 0.507547 | 3.2:-88719203 | MS.gene40225:CDS |
TTCTTCAGCGAAACCGGTGC+CGG | 0.513072 | 3.2:-88720590 | MS.gene40225:CDS |
CCCTCGCCATGGAAAATACA+TGG | 0.514501 | 3.2:-88719563 | MS.gene40225:CDS |
CCAATGCACAAAAGCACGCT+TGG | 0.520245 | 3.2:+88719282 | None:intergenic |
AAGCTATCTATGACATATGC+AGG | 0.524385 | 3.2:-88720021 | MS.gene40225:CDS |
GGTTCTGACTTCGTCAATGA+CGG | 0.528328 | 3.2:+88720526 | None:intergenic |
AACCTGGGGAGATGGATAAA+CGG | 0.532949 | 3.2:+88720132 | None:intergenic |
AACAGAGTTTCAAACCAACT+TGG | 0.533094 | 3.2:-88719725 | MS.gene40225:CDS |
AGAAGGTTCAAAAGCACTGT+TGG | 0.538677 | 3.2:+88719606 | None:intergenic |
CCGCGGTGATGTTGTGCCTA+AGG | 0.540342 | 3.2:-88719524 | MS.gene40225:CDS |
GTGATCTTGCCAAGGTCCAA+AGG | 0.540632 | 3.2:-88719384 | MS.gene40225:CDS |
ATGAAATGGATCCTAGGGTA+AGG | 0.544980 | 3.2:+88719700 | None:intergenic |
CCAGGTCGGAAATGCCTGCT+GGG | 0.545543 | 3.2:-88720823 | MS.gene40225:CDS |
GTTCAGGGTGGAAGAGTTGA+CGG | 0.545624 | 3.2:+88720495 | None:intergenic |
GTTGGTGAGGGTATGGAAGA+AGG | 0.547203 | 3.2:-88719256 | MS.gene40225:CDS |
TCCTGGTGGTGATCTTGCCA+AGG | 0.548720 | 3.2:-88719392 | MS.gene40225:CDS |
TCCATGGCGAGGGTCACACT+TGG | 0.548836 | 3.2:+88719573 | None:intergenic |
TTGTTGATTGGTGTCCAACT+GGG | 0.551076 | 3.2:-88719453 | MS.gene40225:CDS |
TCAATCCACATTGGTCAAGC+CGG | 0.555162 | 3.2:-88720849 | MS.gene40225:CDS |
ATAAACGGTAAAACCCAACT+TGG | 0.555240 | 3.2:+88720147 | None:intergenic |
GTTGGTGCTGAGTCTGGTGA+TGG | 0.556011 | 3.2:-88719178 | MS.gene40225:CDS |
CCACCAGGAACAACAGTTGG+AGG | 0.556528 | 3.2:+88719406 | None:intergenic |
CAGGAACAACAGTTGGAGGC+TGG | 0.557000 | 3.2:+88719410 | None:intergenic |
CCTGGAGACAAGACCGTTGG+AGG | 0.557403 | 3.2:-88720635 | MS.gene40225:CDS |
TGTGCATTGGTATGTTGGTG+AGG | 0.557980 | 3.2:-88719269 | MS.gene40225:CDS |
CACTTGGCCATCATGGAAGA+AGG | 0.558669 | 3.2:+88719589 | None:intergenic |
TCACCACCAGGAACAACAGT+TGG | 0.562091 | 3.2:+88719403 | None:intergenic |
GGAGACAAGACCGTTGGAGG+AGG | 0.562701 | 3.2:-88720632 | MS.gene40225:CDS |
CAGCAACATCAGTGTGCTCA+AGG | 0.564079 | 3.2:+88720059 | None:intergenic |
CAAGGAGGGAATGGGTTGAA+AGG | 0.564699 | 3.2:+88720077 | None:intergenic |
CACCAAGAAACCTTGCAGAC+CGG | 0.566087 | 3.2:+88720252 | None:intergenic |
TAACTCTACCAGTGTTGCTG+AGG | 0.566930 | 3.2:-88719344 | MS.gene40225:CDS |
GGCATCATCTCCTCCTCCAA+CGG | 0.567140 | 3.2:+88720622 | None:intergenic |
TTTGTGTCCTTCAGTTGGGA+AGG | 0.568538 | 3.2:-88720326 | MS.gene40225:intron |
AAAGCATGAAATGGATCCTA+GGG | 0.569228 | 3.2:+88719695 | None:intergenic |
ACACCAATCAACAAACTGAA+TGG | 0.571183 | 3.2:+88719462 | None:intergenic |
ATACCGCACTTGAACCCAGT+TGG | 0.571477 | 3.2:+88719439 | None:intergenic |
GTTGAAAGGACACTGTTGTA+GGG | 0.573119 | 3.2:+88720091 | None:intergenic |
GGAAAACACCTCAGCAACAC+TGG | 0.575051 | 3.2:+88719336 | None:intergenic |
AGAGACAAGGCGATTGAGGT+TGG | 0.575918 | 3.2:+88719967 | None:intergenic |
ACCTGTTATCTCTGCTGAGA+AGG | 0.577342 | 3.2:-88719662 | MS.gene40225:CDS |
AAACCTCAAAGAGGCAGTGA+GGG | 0.578416 | 3.2:+88719771 | None:intergenic |
TGAGTTCTCTGAGGCTCGTG+AGG | 0.578430 | 3.2:-88719233 | MS.gene40225:CDS |
AACCACAGAGGTAGAAACCT+GGG | 0.579213 | 3.2:+88720117 | None:intergenic |
ATGCCTGGAGACAAGACCGT+TGG | 0.583327 | 3.2:-88720638 | MS.gene40225:CDS |
ACCACGGGCGAAGTTGTTGG+CGG | 0.584023 | 3.2:+88720448 | None:intergenic |
GAGAAGGATTATGAGGAGGT+TGG | 0.588091 | 3.2:-88719196 | MS.gene40225:CDS |
GAACTTTACTGCCTTGAACA+CGG | 0.589043 | 3.2:-88720801 | MS.gene40225:CDS |
TGATCTTGCCAAGGTCCAAA+GGG | 0.589383 | 3.2:-88719383 | MS.gene40225:CDS |
AACATCAGTGTGCTCAAGGA+GGG | 0.590528 | 3.2:+88720063 | None:intergenic |
AGTGTGCTCAAGGAGGGAAT+GGG | 0.591430 | 3.2:+88720069 | None:intergenic |
TCCCCAGGTTTCTACCTCTG+TGG | 0.593813 | 3.2:-88720119 | MS.gene40225:CDS |
CGATTGAGGTTGGTGTAAGT+GGG | 0.594949 | 3.2:+88719977 | None:intergenic |
CCAACTTGGTTCCTTACCCT+AGG | 0.596446 | 3.2:-88719711 | MS.gene40225:CDS |
GAAGAGTTGACGGTAAGCAC+CGG | 0.597156 | 3.2:+88720505 | None:intergenic |
CAACCACAGAGGTAGAAACC+TGG | 0.597626 | 3.2:+88720116 | None:intergenic |
AGATCTACGAAGACGGCGCG+TGG | 0.600243 | 3.2:+88720557 | None:intergenic |
AAGGCAGTAAAGTTCCCAGC+AGG | 0.601634 | 3.2:+88720809 | None:intergenic |
TTGTTGATCTATGCCTCGAT+AGG | 0.603776 | 3.2:-88720300 | MS.gene40225:CDS |
AAGCTAGCAGATAACTGTAC+CGG | 0.604721 | 3.2:-88720271 | MS.gene40225:CDS |
GCCAAGTGTGACCCTCGCCA+TGG | 0.604889 | 3.2:-88719574 | MS.gene40225:CDS |
CCTCCAACTGTTGTTCCTGG+TGG | 0.605513 | 3.2:-88719406 | MS.gene40225:CDS |
TTGGTGTTCAATGCTGTGGG+TGG | 0.611760 | 3.2:-88720235 | MS.gene40225:CDS |
GCCGCCAACAACTTCGCCCG+TGG | 0.616675 | 3.2:-88720449 | MS.gene40225:CDS |
GATAACTGTACCGGTCTGCA+AGG | 0.617527 | 3.2:-88720262 | MS.gene40225:CDS |
AGATGATGTTGATGGAGATG+AGG | 0.621023 | 3.2:-88719155 | MS.gene40225:CDS |
GGATCTTGCTGCTCTCGAGA+AGG | 0.621052 | 3.2:-88719212 | MS.gene40225:CDS |
AGAGATAACAGGTGCGTACG+AGG | 0.631288 | 3.2:+88719672 | None:intergenic |
ACTGCAGCATTCACGTCCTT+AGG | 0.632837 | 3.2:+88719508 | None:intergenic |
CCTAGGGTAAGGAACCAAGT+TGG | 0.636144 | 3.2:+88719711 | None:intergenic |
CTAGCTTTCGGATCCTATCG+AGG | 0.641945 | 3.2:+88720287 | None:intergenic |
TGCTCCATCAAACCTCAAAG+AGG | 0.642331 | 3.2:+88719762 | None:intergenic |
CGTACTGGTATAATGACCAC+GGG | 0.644337 | 3.2:+88720433 | None:intergenic |
GGTCAAGCCGGTATCCAGGT+CGG | 0.648566 | 3.2:-88720837 | MS.gene40225:CDS |
CACCCTGAACAACTCATCAG+CGG | 0.650288 | 3.2:-88720482 | MS.gene40225:CDS |
TGTCCAACTGGGTTCAAGTG+CGG | 0.653024 | 3.2:-88719442 | MS.gene40225:CDS |
CAACATCAGTGTGCTCAAGG+AGG | 0.655233 | 3.2:+88720062 | None:intergenic |
TTGCAACCATCAAGACCAAG+AGG | 0.655579 | 3.2:-88719486 | MS.gene40225:CDS |
TGGTTCCAGATCTACGAAGA+CGG | 0.658526 | 3.2:+88720550 | None:intergenic |
CGCTGATGAGTTGTTCAGGG+TGG | 0.660350 | 3.2:+88720483 | None:intergenic |
CAAACCTCAAAGAGGCAGTG+AGG | 0.663855 | 3.2:+88719770 | None:intergenic |
ACGTACTGGTATAATGACCA+CGG | 0.670676 | 3.2:+88720432 | None:intergenic |
ACCTTGGCAAGATCACCACC+AGG | 0.672683 | 3.2:+88719391 | None:intergenic |
GGATACCGGCTTGACCAATG+TGG | 0.673011 | 3.2:+88720844 | None:intergenic |
GAGTGCATTTCAATCCACAT+TGG | 0.673256 | 3.2:-88720858 | MS.gene40225:CDS |
AAGTATATACCTGAGAGACA+AGG | 0.681840 | 3.2:+88719954 | None:intergenic |
TCTCGAGAAGGATTATGAGG+AGG | 0.693923 | 3.2:-88719200 | MS.gene40225:CDS |
ACCACAGAGGTAGAAACCTG+GGG | 0.712460 | 3.2:+88720118 | None:intergenic |
GCTTGTTGTTTGATGTACCG+CGG | 0.713100 | 3.2:-88719541 | MS.gene40225:CDS |
GGAAGAAGGTGAGTTCTCTG+AGG | 0.713464 | 3.2:-88719242 | MS.gene40225:CDS |
GTTGTAGGGTTCAACCACAG+AGG | 0.742914 | 3.2:+88720105 | None:intergenic |
CCTTAGGCACAACATCACCG+CGG | 0.844586 | 3.2:+88719524 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTCTAGATCTCAAATTTA+GGG | - | chr3.2:88719275-88719294 | MS.gene40225:CDS | 20.0% |
!! | TAATTCTAGATCTCAAATTT+AGG | - | chr3.2:88719274-88719293 | MS.gene40225:CDS | 20.0% |
!!! | AGATCTAGAATTAAAAAAAG+TGG | + | chr3.2:88719267-88719286 | None:intergenic | 20.0% |
! | GAATTATGTAGCAAATATTG+AGG | - | chr3.2:88720128-88720147 | MS.gene40225:CDS | 25.0% |
! | TAACAACCAAATATAGAGAA+TGG | - | chr3.2:88720079-88720098 | MS.gene40225:CDS | 25.0% |
! | TATGGTAAAAAATCCAAGTT+GGG | - | chr3.2:88719851-88719870 | MS.gene40225:intron | 25.0% |
! | TTATGGTAAAAAATCCAAGT+TGG | - | chr3.2:88719850-88719869 | MS.gene40225:intron | 25.0% |
! | TTTCAATTGATTAATCGATG+CGG | - | chr3.2:88719325-88719344 | MS.gene40225:CDS | 25.0% |
ATCAAACTTATGATCAATCC+TGG | + | chr3.2:88720699-88720718 | None:intergenic | 30.0% | |
CAAGATCCATTCTCTATATT+TGG | + | chr3.2:88720088-88720107 | None:intergenic | 30.0% | |
GATCTTGAAATATTTGCGTT+TGG | - | chr3.2:88720101-88720120 | MS.gene40225:CDS | 30.0% | |
GGCATTCAGGTAATTAATTA+GGG | - | chr3.2:88719231-88719250 | MS.gene40225:CDS | 30.0% | |
! | TTTGTTTGATGTGCTTTTAC+AGG | - | chr3.2:88720208-88720227 | MS.gene40225:CDS | 30.0% |
AAAGCATGAAATGGATCCTA+GGG | + | chr3.2:88720319-88720338 | None:intergenic | 35.0% | |
AACAGAGTTTCAAACCAACT+TGG | - | chr3.2:88720286-88720305 | MS.gene40225:CDS | 35.0% | |
AAGCTATCTATGACATATGC+AGG | - | chr3.2:88719990-88720009 | MS.gene40225:CDS | 35.0% | |
AAGTATATACCTGAGAGACA+AGG | + | chr3.2:88720060-88720079 | None:intergenic | 35.0% | |
ACACCAATCAACAAACTGAA+TGG | + | chr3.2:88720552-88720571 | None:intergenic | 35.0% | |
ATAAACGGTAAAACCCAACT+TGG | + | chr3.2:88719867-88719886 | None:intergenic | 35.0% | |
ATTGAATGACGAAAACGTAC+TGG | + | chr3.2:88719596-88719615 | None:intergenic | 35.0% | |
CGGCATTCAGGTAATTAATT+AGG | - | chr3.2:88719230-88719249 | MS.gene40225:CDS | 35.0% | |
! | AACAAGCCATGTATTTTCCA+TGG | + | chr3.2:88720457-88720476 | None:intergenic | 35.0% |
! | ATGATTTGTGTCCTTCAGTT+GGG | - | chr3.2:88719681-88719700 | MS.gene40225:CDS | 35.0% |
! | GAGCGTTTATCTGTTGATTA+TGG | - | chr3.2:88719833-88719852 | MS.gene40225:intron | 35.0% |
! | TATGATTTGTGTCCTTCAGT+TGG | - | chr3.2:88719680-88719699 | MS.gene40225:CDS | 35.0% |
! | TTTTGAACCTTCTTCCATGA+TGG | - | chr3.2:88720415-88720434 | MS.gene40225:intron | 35.0% |
!! | TACAGTTATCTGCTAGCTTT+CGG | + | chr3.2:88719739-88719758 | None:intergenic | 35.0% |
AACAAACTGAATGGTCCTCT+TGG | + | chr3.2:88720543-88720562 | None:intergenic | 40.0% | |
AAGCTAGCAGATAACTGTAC+CGG | - | chr3.2:88719740-88719759 | MS.gene40225:CDS | 40.0% | |
ATGAAATGGATCCTAGGGTA+AGG | + | chr3.2:88720314-88720333 | None:intergenic | 40.0% | |
GAACTTTACTGCCTTGAACA+CGG | - | chr3.2:88719210-88719229 | MS.gene40225:CDS | 40.0% | |
GAGTGCATTTCAATCCACAT+TGG | - | chr3.2:88719153-88719172 | MS.gene40225:CDS | 40.0% | |
GTTGAAAGGACACTGTTGTA+GGG | + | chr3.2:88719923-88719942 | None:intergenic | 40.0% | |
TTGTTGATCTATGCCTCGAT+AGG | - | chr3.2:88719711-88719730 | MS.gene40225:CDS | 40.0% | |
! | ACGTACTGGTATAATGACCA+CGG | + | chr3.2:88719582-88719601 | None:intergenic | 40.0% |
! | AGATGATGTTGATGGAGATG+AGG | - | chr3.2:88720856-88720875 | MS.gene40225:CDS | 40.0% |
! | GAAAGCATGAAATGGATCCT+AGG | + | chr3.2:88720320-88720339 | None:intergenic | 40.0% |
! | TTGTTGATTGGTGTCCAACT+GGG | - | chr3.2:88720558-88720577 | MS.gene40225:CDS | 40.0% |
! | TTTGTTGATTGGTGTCCAAC+TGG | - | chr3.2:88720557-88720576 | MS.gene40225:CDS | 40.0% |
!! | AAAAGCACTGTTGGTGATCT+CGG | + | chr3.2:88720399-88720418 | None:intergenic | 40.0% |
!! | AGAAGGTTCAAAAGCACTGT+TGG | + | chr3.2:88720408-88720427 | None:intergenic | 40.0% |
!! | GCTTTTGTGCATTGGTATGT+TGG | - | chr3.2:88720737-88720756 | MS.gene40225:intron | 40.0% |
!! | GGACCATTCAGTTTGTTGAT+TGG | - | chr3.2:88720546-88720565 | MS.gene40225:CDS | 40.0% |
!! | TTCTTGGTGTTCAATGCTGT+GGG | - | chr3.2:88719773-88719792 | MS.gene40225:CDS | 40.0% |
!! | TTTCTTGGTGTTCAATGCTG+TGG | - | chr3.2:88719772-88719791 | MS.gene40225:CDS | 40.0% |
AAACCTCAAAGAGGCAGTGA+GGG | + | chr3.2:88720243-88720262 | None:intergenic | 45.0% | |
AACACGTTCTTCAGCGAAAC+CGG | - | chr3.2:88719415-88719434 | MS.gene40225:CDS | 45.0% | |
AACATCAGTGTGCTCAAGGA+GGG | + | chr3.2:88719951-88719970 | None:intergenic | 45.0% | |
AACCACAGAGGTAGAAACCT+GGG | + | chr3.2:88719897-88719916 | None:intergenic | 45.0% | |
AACCTGGGGAGATGGATAAA+CGG | + | chr3.2:88719882-88719901 | None:intergenic | 45.0% | |
AAGAGAACCCAAACCAGATC+CGG | + | chr3.2:88719807-88719826 | None:intergenic | 45.0% | |
ACAATCTCCTTCCCAACTGA+AGG | + | chr3.2:88719695-88719714 | None:intergenic | 45.0% | |
ACCTGTTATCTCTGCTGAGA+AGG | - | chr3.2:88720349-88720368 | MS.gene40225:intron | 45.0% | |
GAGAAGGATTATGAGGAGGT+TGG | - | chr3.2:88720815-88720834 | MS.gene40225:CDS | 45.0% | |
GGTTGAAAGGACACTGTTGT+AGG | + | chr3.2:88719924-88719943 | None:intergenic | 45.0% | |
GTCATTGACGAAGTCAGAAC+CGG | - | chr3.2:88719487-88719506 | MS.gene40225:CDS | 45.0% | |
TCAATCCACATTGGTCAAGC+CGG | - | chr3.2:88719162-88719181 | MS.gene40225:CDS | 45.0% | |
TCTCGAGAAGGATTATGAGG+AGG | - | chr3.2:88720811-88720830 | MS.gene40225:CDS | 45.0% | |
TGATCTTGCCAAGGTCCAAA+GGG | - | chr3.2:88720628-88720647 | MS.gene40225:CDS | 45.0% | |
TGCTCCATCAAACCTCAAAG+AGG | + | chr3.2:88720252-88720271 | None:intergenic | 45.0% | |
TGCTCTCGAGAAGGATTATG+AGG | - | chr3.2:88720808-88720827 | MS.gene40225:CDS | 45.0% | |
TGGTTCCAGATCTACGAAGA+CGG | + | chr3.2:88719464-88719483 | None:intergenic | 45.0% | |
TTACCTGAATGCCGTGTTCA+AGG | + | chr3.2:88719224-88719243 | None:intergenic | 45.0% | |
TTCGCTGAAGAACGTGTTGA+AGG | + | chr3.2:88719413-88719432 | None:intergenic | 45.0% | |
TTGCAACCATCAAGACCAAG+AGG | - | chr3.2:88720525-88720544 | MS.gene40225:CDS | 45.0% | |
TTTGTGTCCTTCAGTTGGGA+AGG | - | chr3.2:88719685-88719704 | MS.gene40225:CDS | 45.0% | |
! | CCATGTATTTTCCATGGCGA+GGG | + | chr3.2:88720451-88720470 | None:intergenic | 45.0% |
! | CGTACGAGGAAAGCATGAAA+TGG | + | chr3.2:88720328-88720347 | None:intergenic | 45.0% |
! | CGTACTGGTATAATGACCAC+GGG | + | chr3.2:88719581-88719600 | None:intergenic | 45.0% |
! | GGTTCTGACTTCGTCAATGA+CGG | + | chr3.2:88719488-88719507 | None:intergenic | 45.0% |
! | GTGCATTGGTATGTTGGTGA+GGG | - | chr3.2:88720743-88720762 | MS.gene40225:intron | 45.0% |
! | TAACTCTACCAGTGTTGCTG+AGG | - | chr3.2:88720667-88720686 | MS.gene40225:intron | 45.0% |
! | TGGTTTGGGTTCTCTTCTGT+TGG | - | chr3.2:88719811-88719830 | MS.gene40225:intron | 45.0% |
! | TGTGCATTGGTATGTTGGTG+AGG | - | chr3.2:88720742-88720761 | MS.gene40225:intron | 45.0% |
! | TTGGTATGTTGGTGAGGGTA+TGG | - | chr3.2:88720748-88720767 | MS.gene40225:intron | 45.0% |
!! | AATGGTCCTCTTGGTCTTGA+TGG | + | chr3.2:88720534-88720553 | None:intergenic | 45.0% |
!! | ACTGCCTCTTTGAGGTTTGA+TGG | - | chr3.2:88720245-88720264 | MS.gene40225:CDS | 45.0% |
!! | CGATTGAGGTTGGTGTAAGT+GGG | + | chr3.2:88720037-88720056 | None:intergenic | 45.0% |
!! | GCTTGTTGTTTGATGTACCG+CGG | - | chr3.2:88720470-88720489 | MS.gene40225:CDS | 45.0% |
!! | GGTGATGGAGATGATGTTGA+TGG | - | chr3.2:88720848-88720867 | MS.gene40225:CDS | 45.0% |
!!! | GGTGTTGTTTTTCAGCCTGA+TGG | - | chr3.2:88719346-88719365 | MS.gene40225:CDS | 45.0% |
AAGGCAGTAAAGTTCCCAGC+AGG | + | chr3.2:88719205-88719224 | None:intergenic | 50.0% | |
ACCACAGAGGTAGAAACCTG+GGG | + | chr3.2:88719896-88719915 | None:intergenic | 50.0% | |
ACTGCAGCATTCACGTCCTT+AGG | + | chr3.2:88720506-88720525 | None:intergenic | 50.0% | |
AGAGACAAGGCGATTGAGGT+TGG | + | chr3.2:88720047-88720066 | None:intergenic | 50.0% | |
AGAGATAACAGGTGCGTACG+AGG | + | chr3.2:88720342-88720361 | None:intergenic | 50.0% | |
AGATCATGCACACAGCCCTT+TGG | + | chr3.2:88720646-88720665 | None:intergenic | 50.0% | |
AGTGTGCTCAAGGAGGGAAT+GGG | + | chr3.2:88719945-88719964 | None:intergenic | 50.0% | |
ATACCGCACTTGAACCCAGT+TGG | + | chr3.2:88720575-88720594 | None:intergenic | 50.0% | |
CAAACCTCAAAGAGGCAGTG+AGG | + | chr3.2:88720244-88720263 | None:intergenic | 50.0% | |
CAACATCAGTGTGCTCAAGG+AGG | + | chr3.2:88719952-88719971 | None:intergenic | 50.0% | |
CAACCACAGAGGTAGAAACC+TGG | + | chr3.2:88719898-88719917 | None:intergenic | 50.0% | |
CACCAAGAAACCTTGCAGAC+CGG | + | chr3.2:88719762-88719781 | None:intergenic | 50.0% | |
CACCCTGAACAACTCATCAG+CGG | - | chr3.2:88719529-88719548 | MS.gene40225:CDS | 50.0% | |
CACTTGGCCATCATGGAAGA+AGG | + | chr3.2:88720425-88720444 | None:intergenic | 50.0% | |
CAGCAACATCAGTGTGCTCA+AGG | + | chr3.2:88719955-88719974 | None:intergenic | 50.0% | |
CCAACTTGGTTCCTTACCCT+AGG | - | chr3.2:88720300-88720319 | MS.gene40225:CDS | 50.0% | |
CCCTCGCCATGGAAAATACA+TGG | - | chr3.2:88720448-88720467 | MS.gene40225:CDS | 50.0% | |
CCTAGGGTAAGGAACCAAGT+TGG | + | chr3.2:88720303-88720322 | None:intergenic | 50.0% | |
CGGCAACAGAAAGCTGTTCA+TGG | + | chr3.2:88720379-88720398 | None:intergenic | 50.0% | |
CTGACTTCGTCAATGACGGT+TGG | + | chr3.2:88719484-88719503 | None:intergenic | 50.0% | |
GAAGAGTTGACGGTAAGCAC+CGG | + | chr3.2:88719509-88719528 | None:intergenic | 50.0% | |
GCCTTCTCAGCAGAGATAAC+AGG | + | chr3.2:88720353-88720372 | None:intergenic | 50.0% | |
GGAAAACACCTCAGCAACAC+TGG | + | chr3.2:88720678-88720697 | None:intergenic | 50.0% | |
GGAAGAAGGTGAGTTCTCTG+AGG | - | chr3.2:88720769-88720788 | MS.gene40225:intron | 50.0% | |
GTGATCTTGCCAAGGTCCAA+AGG | - | chr3.2:88720627-88720646 | MS.gene40225:CDS | 50.0% | |
GTTCAGGGTGGAAGAGTTGA+CGG | + | chr3.2:88719519-88719538 | None:intergenic | 50.0% | |
GTTGTAGGGTTCAACCACAG+AGG | + | chr3.2:88719909-88719928 | None:intergenic | 50.0% | |
TACCGGTCTGCAAGGTTTCT+TGG | - | chr3.2:88719757-88719776 | MS.gene40225:CDS | 50.0% | |
TACCGTTTATCCATCTCCCC+AGG | - | chr3.2:88719877-88719896 | MS.gene40225:intron | 50.0% | |
TCACCACCAGGAACAACAGT+TGG | + | chr3.2:88720611-88720630 | None:intergenic | 50.0% | |
TGCCGCTGATGAGTTGTTCA+GGG | + | chr3.2:88719534-88719553 | None:intergenic | 50.0% | |
TGTCCAACTGGGTTCAAGTG+CGG | - | chr3.2:88720569-88720588 | MS.gene40225:CDS | 50.0% | |
TTGCCGCTGATGAGTTGTTC+AGG | + | chr3.2:88719535-88719554 | None:intergenic | 50.0% | |
! | CCAAGCGTGCTTTTGTGCAT+TGG | - | chr3.2:88720729-88720748 | MS.gene40225:intron | 50.0% |
! | CCAATGCACAAAAGCACGCT+TGG | + | chr3.2:88720732-88720751 | None:intergenic | 50.0% |
! | CTAGCTTTCGGATCCTATCG+AGG | + | chr3.2:88719727-88719746 | None:intergenic | 50.0% |
! | GATAACTGTACCGGTCTGCA+AGG | - | chr3.2:88719749-88719768 | MS.gene40225:CDS | 50.0% |
! | GCCATGTATTTTCCATGGCG+AGG | + | chr3.2:88720452-88720471 | None:intergenic | 50.0% |
! | GTTGGTGAGGGTATGGAAGA+AGG | - | chr3.2:88720755-88720774 | MS.gene40225:intron | 50.0% |
! | TTGGTGTTCAATGCTGTGGG+TGG | - | chr3.2:88719776-88719795 | MS.gene40225:CDS | 50.0% |
!! | CAAGGAGGGAATGGGTTGAA+AGG | + | chr3.2:88719937-88719956 | None:intergenic | 50.0% |
!! | GCGATTGAGGTTGGTGTAAG+TGG | + | chr3.2:88720038-88720057 | None:intergenic | 50.0% |
!! | GTGTTGCTGAGGTGTTTTCC+AGG | - | chr3.2:88720678-88720697 | MS.gene40225:intron | 50.0% |
ACCTTGGCAAGATCACCACC+AGG | + | chr3.2:88720623-88720642 | None:intergenic | 55.0% | |
AGGGTCACACTTGGCCATCA+TGG | + | chr3.2:88720432-88720451 | None:intergenic | 55.0% | |
ATGACCACGGGCGAAGTTGT+TGG | + | chr3.2:88719569-88719588 | None:intergenic | 55.0% | |
ATGCCTGGAGACAAGACCGT+TGG | - | chr3.2:88719373-88719392 | MS.gene40225:CDS | 55.0% | |
CAGCCTCCAACTGTTGTTCC+TGG | - | chr3.2:88720602-88720621 | MS.gene40225:CDS | 55.0% | |
CAGGAACAACAGTTGGAGGC+TGG | + | chr3.2:88720604-88720623 | None:intergenic | 55.0% | |
CAGTGTGCTCAAGGAGGGAA+TGG | + | chr3.2:88719946-88719965 | None:intergenic | 55.0% | |
CATCCCTCACTGCCTCTTTG+AGG | - | chr3.2:88720237-88720256 | MS.gene40225:CDS | 55.0% | |
CATTGGTCAAGCCGGTATCC+AGG | - | chr3.2:88719170-88719189 | MS.gene40225:CDS | 55.0% | |
CCACCAGGAACAACAGTTGG+AGG | + | chr3.2:88720608-88720627 | None:intergenic | 55.0% | |
CCTCAATCGCCTTGTCTCTC+AGG | - | chr3.2:88720048-88720067 | MS.gene40225:CDS | 55.0% | |
CCTCCAACTGTTGTTCCTGG+TGG | - | chr3.2:88720605-88720624 | MS.gene40225:CDS | 55.0% | |
CCTGAGAGACAAGGCGATTG+AGG | + | chr3.2:88720051-88720070 | None:intergenic | 55.0% | |
CCTTAGGCACAACATCACCG+CGG | + | chr3.2:88720490-88720509 | None:intergenic | 55.0% | |
CGCTGATGAGTTGTTCAGGG+TGG | + | chr3.2:88719531-88719550 | None:intergenic | 55.0% | |
CTGCCTTGAACACGGCATTC+AGG | - | chr3.2:88719218-88719237 | MS.gene40225:CDS | 55.0% | |
GAGGTAGAAACCTGGGGAGA+TGG | + | chr3.2:88719890-88719909 | None:intergenic | 55.0% | |
GGATCTTGCTGCTCTCGAGA+AGG | - | chr3.2:88720799-88720818 | MS.gene40225:CDS | 55.0% | |
GGCATCATCTCCTCCTCCAA+CGG | + | chr3.2:88719392-88719411 | None:intergenic | 55.0% | |
GGCATTTCCGACCTGGATAC+CGG | + | chr3.2:88719184-88719203 | None:intergenic | 55.0% | |
GTGTTCAATGCTGTGGGTGG+TGG | - | chr3.2:88719779-88719798 | MS.gene40225:CDS | 55.0% | |
TCCCCAGGTTTCTACCTCTG+TGG | - | chr3.2:88719892-88719911 | MS.gene40225:intron | 55.0% | |
TGGAACATGCTTTCCGGCAC+CGG | + | chr3.2:88719437-88719456 | None:intergenic | 55.0% | |
TGGTGGAACCGGATCTGGTT+TGG | - | chr3.2:88719796-88719815 | MS.gene40225:intron | 55.0% | |
TTCTTCAGCGAAACCGGTGC+CGG | - | chr3.2:88719421-88719440 | MS.gene40225:CDS | 55.0% | |
! | GGTGGAACCGGATCTGGTTT+GGG | - | chr3.2:88719797-88719816 | MS.gene40225:intron | 55.0% |
! | TCCTGGTGGTGATCTTGCCA+AGG | - | chr3.2:88720619-88720638 | MS.gene40225:CDS | 55.0% |
!! | AATGCTGTGGGTGGTGGAAC+CGG | - | chr3.2:88719785-88719804 | MS.gene40225:intron | 55.0% |
!! | GGATACCGGCTTGACCAATG+TGG | + | chr3.2:88719170-88719189 | None:intergenic | 55.0% |
!! | GTTGGTGCTGAGTCTGGTGA+TGG | - | chr3.2:88720833-88720852 | MS.gene40225:CDS | 55.0% |
!! | TGAGTTCTCTGAGGCTCGTG+AGG | - | chr3.2:88720778-88720797 | MS.gene40225:intron | 55.0% |
ACCACGGGCGAAGTTGTTGG+CGG | + | chr3.2:88719566-88719585 | None:intergenic | 60.0% | |
ACGCGCCGTCTTCGTAGATC+TGG | - | chr3.2:88719456-88719475 | MS.gene40225:CDS | 60.0% | |
AGATCTACGAAGACGGCGCG+TGG | + | chr3.2:88719457-88719476 | None:intergenic | 60.0% | |
CCAGGTCGGAAATGCCTGCT+GGG | - | chr3.2:88719188-88719207 | MS.gene40225:CDS | 60.0% | |
CCGCGGTGATGTTGTGCCTA+AGG | - | chr3.2:88720487-88720506 | MS.gene40225:CDS | 60.0% | |
CCTGGAGACAAGACCGTTGG+AGG | - | chr3.2:88719376-88719395 | MS.gene40225:CDS | 60.0% | |
GCACACAGCCCTTTGGACCT+TGG | + | chr3.2:88720639-88720658 | None:intergenic | 60.0% | |
GGAGACAAGACCGTTGGAGG+AGG | - | chr3.2:88719379-88719398 | MS.gene40225:CDS | 60.0% | |
GGCGCGTGGAACATGCTTTC+CGG | + | chr3.2:88719443-88719462 | None:intergenic | 60.0% | |
GGTCAAGCCGGTATCCAGGT+CGG | - | chr3.2:88719174-88719193 | MS.gene40225:CDS | 60.0% | |
TCCAGGTCGGAAATGCCTGC+TGG | - | chr3.2:88719187-88719206 | MS.gene40225:CDS | 60.0% | |
TCCATGGCGAGGGTCACACT+TGG | + | chr3.2:88720441-88720460 | None:intergenic | 60.0% | |
TCTCCAGGCATCTGGCCATC+AGG | + | chr3.2:88719364-88719383 | None:intergenic | 60.0% | |
! | CCTCCAACGGTCTTGTCTCC+AGG | + | chr3.2:88719379-88719398 | None:intergenic | 60.0% |
! | CGGTCTTGTCTCCAGGCATC+TGG | + | chr3.2:88719372-88719391 | None:intergenic | 60.0% |
!! | GAGGAGGTTGGTGCTGAGTC+TGG | - | chr3.2:88720827-88720846 | MS.gene40225:CDS | 60.0% |
CAGCCTGATGGCCAGATGCC+TGG | - | chr3.2:88719358-88719377 | MS.gene40225:CDS | 65.0% | |
CCCAGCAGGCATTTCCGACC+TGG | + | chr3.2:88719191-88719210 | None:intergenic | 65.0% | |
GCCAAGTGTGACCCTCGCCA+TGG | - | chr3.2:88720437-88720456 | MS.gene40225:intron | 65.0% | |
!! | GTGGGTGGTGGAACCGGATC+TGG | - | chr3.2:88719791-88719810 | MS.gene40225:intron | 65.0% |
GCCGCCAACAACTTCGCCCG+TGG | - | chr3.2:88719562-88719581 | MS.gene40225:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 88719147 | 88720886 | 88719147 | ID=MS.gene40225 |
chr3.2 | mRNA | 88719147 | 88720886 | 88719147 | ID=MS.gene40225.t1;Parent=MS.gene40225 |
chr3.2 | exon | 88720794 | 88720886 | 88720794 | ID=MS.gene40225.t1.exon1;Parent=MS.gene40225.t1 |
chr3.2 | CDS | 88720794 | 88720886 | 88720794 | ID=cds.MS.gene40225.t1;Parent=MS.gene40225.t1 |
chr3.2 | exon | 88720438 | 88720672 | 88720438 | ID=MS.gene40225.t1.exon2;Parent=MS.gene40225.t1 |
chr3.2 | CDS | 88720438 | 88720672 | 88720438 | ID=cds.MS.gene40225.t1;Parent=MS.gene40225.t1 |
chr3.2 | exon | 88719964 | 88720334 | 88719964 | ID=MS.gene40225.t1.exon3;Parent=MS.gene40225.t1 |
chr3.2 | CDS | 88719964 | 88720334 | 88719964 | ID=cds.MS.gene40225.t1;Parent=MS.gene40225.t1 |
chr3.2 | exon | 88719147 | 88719803 | 88719147 | ID=MS.gene40225.t1.exon4;Parent=MS.gene40225.t1 |
chr3.2 | CDS | 88719147 | 88719803 | 88719147 | ID=cds.MS.gene40225.t1;Parent=MS.gene40225.t1 |
Gene Sequence |
Protein sequence |