Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23930.t1 | XP_003603670.1 | 100 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 3.10E-263 | 917.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23930.t1 | P46259 | 98.9 | 452 | 4 | 1 | 1 | 451 | 1 | 452 | 6.5e-262 | 904.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23930.t1 | G7J421 | 100.0 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 2.2e-263 | 917.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052774 | MS.gene23930 | 0.826401 | 2.77E-54 | -1.69E-46 |
| MS.gene059061 | MS.gene23930 | 0.810434 | 1.15E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23930.t1 | MTR_3g110720 | 100.000 | 451 | 0 | 0 | 1 | 451 | 1 | 451 | 0.0 | 939 |
| MS.gene23930.t1 | MTR_4g097830 | 97.118 | 451 | 13 | 0 | 1 | 451 | 1 | 451 | 0.0 | 914 |
| MS.gene23930.t1 | MTR_1g106005 | 97.550 | 449 | 11 | 0 | 1 | 449 | 1 | 449 | 0.0 | 914 |
| MS.gene23930.t1 | MTR_8g085980 | 92.874 | 435 | 31 | 0 | 1 | 435 | 1 | 435 | 0.0 | 834 |
| MS.gene23930.t1 | MTR_7g085800 | 91.403 | 442 | 38 | 0 | 1 | 442 | 1 | 442 | 0.0 | 829 |
| MS.gene23930.t1 | MTR_6g029190 | 83.628 | 452 | 69 | 3 | 1 | 451 | 1 | 448 | 0.0 | 774 |
| MS.gene23930.t1 | MTR_2g041670 | 73.942 | 449 | 112 | 2 | 1 | 449 | 1 | 444 | 0.0 | 662 |
| MS.gene23930.t1 | MTR_2g041400 | 75.291 | 429 | 101 | 2 | 1 | 429 | 1 | 424 | 0.0 | 646 |
| MS.gene23930.t1 | MTR_4g094535 | 42.166 | 434 | 241 | 2 | 1 | 434 | 1 | 424 | 1.08e-125 | 372 |
| MS.gene23930.t1 | MTR_8g107250 | 41.372 | 452 | 254 | 3 | 1 | 450 | 1 | 443 | 1.12e-125 | 372 |
| MS.gene23930.t1 | MTR_4g017630 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 4.11e-125 | 371 |
| MS.gene23930.t1 | MTR_4g019110 | 42.396 | 434 | 240 | 2 | 1 | 434 | 1 | 424 | 1.78e-124 | 369 |
| MS.gene23930.t1 | MTR_4g019090 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 2.46e-124 | 369 |
| MS.gene23930.t1 | MTR_1g101130 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 6.06e-124 | 368 |
| MS.gene23930.t1 | MTR_2g031310 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 6.55e-124 | 367 |
| MS.gene23930.t1 | MTR_7g089120 | 41.876 | 437 | 238 | 4 | 1 | 434 | 1 | 424 | 1.43e-123 | 367 |
| MS.gene23930.t1 | MTR_3g113970 | 40.503 | 437 | 246 | 3 | 1 | 434 | 1 | 426 | 5.85e-123 | 365 |
| MS.gene23930.t1 | MTR_8g098360 | 39.545 | 440 | 256 | 2 | 1 | 440 | 1 | 430 | 4.22e-122 | 363 |
| MS.gene23930.t1 | MTR_3g063410 | 97.403 | 154 | 4 | 0 | 252 | 405 | 24 | 177 | 5.14e-110 | 323 |
| MS.gene23930.t1 | MTR_3g063410 | 97.101 | 138 | 4 | 0 | 268 | 405 | 1 | 138 | 3.76e-96 | 286 |
| MS.gene23930.t1 | MTR_7g117050 | 31.614 | 446 | 282 | 9 | 2 | 433 | 3 | 439 | 1.29e-76 | 247 |
| MS.gene23930.t1 | MTR_6g075280 | 42.553 | 94 | 35 | 1 | 355 | 448 | 608 | 682 | 1.30e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23930.t1 | AT4G14960 | 97.105 | 449 | 13 | 0 | 1 | 449 | 1 | 449 | 0.0 | 913 |
| MS.gene23930.t1 | AT1G04820 | 96.882 | 449 | 14 | 0 | 1 | 449 | 1 | 449 | 0.0 | 911 |
| MS.gene23930.t1 | AT1G50010 | 96.882 | 449 | 14 | 0 | 1 | 449 | 1 | 449 | 0.0 | 911 |
| MS.gene23930.t1 | AT5G19780 | 93.793 | 435 | 27 | 0 | 1 | 435 | 1 | 435 | 0.0 | 839 |
| MS.gene23930.t1 | AT5G19770 | 93.793 | 435 | 27 | 0 | 1 | 435 | 1 | 435 | 0.0 | 839 |
| MS.gene23930.t1 | AT1G64740 | 90.345 | 435 | 42 | 0 | 1 | 435 | 1 | 435 | 0.0 | 813 |
| MS.gene23930.t1 | AT4G14960 | 94.103 | 407 | 17 | 1 | 1 | 407 | 1 | 400 | 0.0 | 800 |
| MS.gene23930.t1 | AT1G75780 | 41.475 | 434 | 245 | 2 | 1 | 434 | 1 | 425 | 1.56e-126 | 374 |
| MS.gene23930.t1 | AT5G62700 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 3.78e-125 | 371 |
| MS.gene23930.t1 | AT5G62690 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 3.78e-125 | 371 |
| MS.gene23930.t1 | AT1G20010 | 41.475 | 434 | 245 | 2 | 1 | 434 | 1 | 425 | 1.13e-124 | 370 |
| MS.gene23930.t1 | AT2G29550 | 41.270 | 441 | 249 | 2 | 1 | 441 | 1 | 431 | 1.82e-124 | 369 |
| MS.gene23930.t1 | AT5G12250 | 41.876 | 437 | 238 | 4 | 1 | 434 | 1 | 424 | 2.34e-124 | 369 |
| MS.gene23930.t1 | AT4G20890 | 41.935 | 434 | 242 | 2 | 1 | 434 | 1 | 424 | 5.35e-124 | 368 |
| MS.gene23930.t1 | AT5G23860 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 7.55e-124 | 368 |
| MS.gene23930.t1 | AT5G23860 | 41.705 | 434 | 243 | 2 | 1 | 434 | 1 | 424 | 7.55e-124 | 368 |
| MS.gene23930.t1 | AT5G44340 | 41.705 | 434 | 243 | 3 | 1 | 434 | 1 | 424 | 4.99e-122 | 363 |
| MS.gene23930.t1 | AT5G05620 | 32.287 | 446 | 279 | 9 | 2 | 433 | 3 | 439 | 5.54e-78 | 250 |
| MS.gene23930.t1 | AT3G61650 | 31.839 | 446 | 281 | 9 | 2 | 433 | 3 | 439 | 1.12e-76 | 247 |
Find 148 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCGTTTATCTGTTGATTA+TGG | 0.257743 | 3.1:-88592706 | MS.gene23930:CDS |
| TACCGGTCTGCAAGGTTTCT+TGG | 0.265637 | 3.1:-88592782 | MS.gene23930:CDS |
| ACTGCCTCTTTGAGGTTTGA+TGG | 0.279194 | 3.1:-88592292 | MS.gene23930:CDS |
| AATGGTCCTCTTGGTCTTGA+TGG | 0.297222 | 3.1:+88592006 | None:intergenic |
| GGCGCGTGGAACATGCTTTC+CGG | 0.314398 | 3.1:+88593099 | None:intergenic |
| CATCCCTCACTGCCTCTTTG+AGG | 0.314555 | 3.1:-88592300 | MS.gene23930:CDS |
| CAGCCTCCAACTGTTGTTCC+TGG | 0.314809 | 3.1:-88591935 | MS.gene23930:CDS |
| TGGTGGAACCGGATCTGGTT+TGG | 0.315781 | 3.1:-88592743 | MS.gene23930:CDS |
| GGTGGAACCGGATCTGGTTT+GGG | 0.317975 | 3.1:-88592742 | MS.gene23930:CDS |
| TTTGTTGATTGGTGTCCAAC+TGG | 0.322748 | 3.1:-88591980 | MS.gene23930:CDS |
| TTGCCGCTGATGAGTTGTTC+AGG | 0.339225 | 3.1:+88593007 | None:intergenic |
| TACAGTTATCTGCTAGCTTT+CGG | 0.351362 | 3.1:+88592803 | None:intergenic |
| AACACGTTCTTCAGCGAAAC+CGG | 0.359208 | 3.1:-88593124 | MS.gene23930:CDS |
| CCTCAATCGCCTTGTCTCTC+AGG | 0.383066 | 3.1:-88592491 | MS.gene23930:intron |
| CTGCCTTGAACACGGCATTC+AGG | 0.391474 | 3.1:-88593320 | MS.gene23930:intron |
| CGGTCTTGTCTCCAGGCATC+TGG | 0.396008 | 3.1:+88593170 | None:intergenic |
| TCTCCAGGCATCTGGCCATC+AGG | 0.405017 | 3.1:+88593178 | None:intergenic |
| TGGTTTGGGTTCTCTTCTGT+TGG | 0.405165 | 3.1:-88592728 | MS.gene23930:CDS |
| CAGCAACAGAAAGCTGTTCA+TGG | 0.409667 | 3.1:+88592161 | None:intergenic |
| GCCTTCTCAGCAGAGATAAC+AGG | 0.413340 | 3.1:+88592187 | None:intergenic |
| CAGCCTGATGGCCAGATGCC+TGG | 0.419485 | 3.1:-88593181 | MS.gene23930:CDS |
| CCTCCAACGGTCTTGTCTCC+AGG | 0.420149 | 3.1:+88593163 | None:intergenic |
| GTGGGTGGTGGAACCGGATC+TGG | 0.423776 | 3.1:-88592748 | MS.gene23930:CDS |
| TTACCTGAATGCCGTGTTCA+AGG | 0.426104 | 3.1:+88593317 | None:intergenic |
| GAGGAGGTTGGTGCTGAGTC+TGG | 0.430544 | 3.1:-88591710 | MS.gene23930:CDS |
| GGACCATTCAGTTTGTTGAT+TGG | 0.433267 | 3.1:-88591991 | MS.gene23930:CDS |
| TTCTTGGTGTTCAATGCTGT+GGG | 0.434584 | 3.1:-88592766 | MS.gene23930:CDS |
| TGGAACATGCTTTCCGGCAC+CGG | 0.438085 | 3.1:+88593105 | None:intergenic |
| AGATCATGCACACAGCCCTT+TGG | 0.440237 | 3.1:+88591894 | None:intergenic |
| GTGTTCAATGCTGTGGGTGG+TGG | 0.440766 | 3.1:-88592760 | MS.gene23930:CDS |
| CAGTGTGCTCAAGGAGGGAA+TGG | 0.443924 | 3.1:+88592596 | None:intergenic |
| TTGGTATGTTGGTGAGGGTA+TGG | 0.447387 | 3.1:-88591789 | MS.gene23930:CDS |
| GCGATTGAGGTTGGTGTAAG+TGG | 0.449517 | 3.1:+88592504 | None:intergenic |
| AATGCTGTGGGTGGTGGAAC+CGG | 0.451993 | 3.1:-88592754 | MS.gene23930:CDS |
| ATCAAACTTATGATCAATCC+TGG | 0.453188 | 3.1:+88591841 | None:intergenic |
| GGTTGAAAGGACACTGTTGT+AGG | 0.458409 | 3.1:+88592618 | None:intergenic |
| ACGCGCCGTCTTCGTAGATC+TGG | 0.458537 | 3.1:-88593083 | MS.gene23930:CDS |
| AACAAACTGAATGGTCCTCT+TGG | 0.460464 | 3.1:+88591997 | None:intergenic |
| TCCAGGTCGGAAATGCCTGC+TGG | 0.462149 | 3.1:-88593351 | MS.gene23930:CDS |
| TGCCGCTGATGAGTTGTTCA+GGG | 0.465671 | 3.1:+88593008 | None:intergenic |
| GGCATTTCCGACCTGGATAC+CGG | 0.466918 | 3.1:+88593357 | None:intergenic |
| CCCAGCAGGCATTTCCGACC+TGG | 0.472516 | 3.1:+88593350 | None:intergenic |
| GAAAGCATGAAATGGATCCT+AGG | 0.478017 | 3.1:+88592220 | None:intergenic |
| CCTGAGAGACAAGGCGATTG+AGG | 0.482372 | 3.1:+88592491 | None:intergenic |
| ATGACCACGGGCGAAGTTGT+TGG | 0.484462 | 3.1:+88592973 | None:intergenic |
| GCACACAGCCCTTTGGACCT+TGG | 0.485066 | 3.1:+88591901 | None:intergenic |
| CATTGGTCAAGCCGGTATCC+AGG | 0.488348 | 3.1:-88593368 | MS.gene23930:CDS |
| CGTACGAGGAAAGCATGAAA+TGG | 0.493705 | 3.1:+88592212 | None:intergenic |
| GGTGATGGAGATGATGTTGA+TGG | 0.495196 | 3.1:-88591689 | MS.gene23930:CDS |
| GTCATTGACGAAGTCAGAAC+CGG | 0.497007 | 3.1:-88593052 | MS.gene23930:CDS |
| GAGGTAGAAACCTGGGGAGA+TGG | 0.498412 | 3.1:+88592652 | None:intergenic |
| GTGCATTGGTATGTTGGTGA+GGG | 0.501347 | 3.1:-88591794 | MS.gene23930:CDS |
| TTTCTTGGTGTTCAATGCTG+TGG | 0.502010 | 3.1:-88592767 | MS.gene23930:CDS |
| CTGACTTCGTCAATGACGGT+TGG | 0.504857 | 3.1:+88593058 | None:intergenic |
| TACCGTTTATCCATCTCCCC+AGG | 0.505210 | 3.1:-88592662 | MS.gene23930:CDS |
| AAGAGAACCCAAACCAGATC+CGG | 0.505914 | 3.1:+88592735 | None:intergenic |
| TGCTCTCGAGAAGGATTATG+AGG | 0.507547 | 3.1:-88591729 | MS.gene23930:CDS |
| TTCTTCAGCGAAACCGGTGC+CGG | 0.513072 | 3.1:-88593118 | MS.gene23930:CDS |
| CCCTCGCCATGGAAAATACA+TGG | 0.514501 | 3.1:-88592089 | MS.gene23930:CDS |
| CCAATGCACAAAAGCACGCT+TGG | 0.520245 | 3.1:+88591808 | None:intergenic |
| AAGCTATCTATGACATATGC+AGG | 0.524385 | 3.1:-88592549 | MS.gene23930:CDS |
| GGTTCTGACTTCGTCAATGA+CGG | 0.528328 | 3.1:+88593054 | None:intergenic |
| AACCTGGGGAGATGGATAAA+CGG | 0.532949 | 3.1:+88592660 | None:intergenic |
| AGGGTCACACTTAGCCATCA+TGG | 0.532951 | 3.1:+88592108 | None:intergenic |
| AACAGAGTTTCAAACCAACT+TGG | 0.533094 | 3.1:-88592251 | MS.gene23930:CDS |
| CACTTAGCCATCATGGAAGA+AGG | 0.536043 | 3.1:+88592115 | None:intergenic |
| AGAAGGTTCAAAAGCACTGT+TGG | 0.538677 | 3.1:+88592132 | None:intergenic |
| CCGCGGTGATGTTGTGCCTA+AGG | 0.540342 | 3.1:-88592050 | MS.gene23930:CDS |
| GTGATCTTGCCAAGGTCCAA+AGG | 0.540632 | 3.1:-88591910 | MS.gene23930:CDS |
| ATGAAATGGATCCTAGGGTA+AGG | 0.544980 | 3.1:+88592226 | None:intergenic |
| CCAGGTCGGAAATGCCTGCT+GGG | 0.545543 | 3.1:-88593350 | MS.gene23930:CDS |
| GTTCAGGGTGGAAGAGTTGA+CGG | 0.545624 | 3.1:+88593023 | None:intergenic |
| GTTGGTGAGGGTATGGAAGA+AGG | 0.547203 | 3.1:-88591782 | MS.gene23930:CDS |
| TCCTGGTGGTGATCTTGCCA+AGG | 0.548720 | 3.1:-88591918 | MS.gene23930:CDS |
| TTGTTGATTGGTGTCCAACT+GGG | 0.551076 | 3.1:-88591979 | MS.gene23930:CDS |
| TCAATCCACATTGGTCAAGC+CGG | 0.555162 | 3.1:-88593376 | MS.gene23930:CDS |
| ATAAACGGTAAAACCCAACT+TGG | 0.555240 | 3.1:+88592675 | None:intergenic |
| GTTGGTGCTGAGTCTGGTGA+TGG | 0.556011 | 3.1:-88591704 | MS.gene23930:CDS |
| CCACCAGGAACAACAGTTGG+AGG | 0.556528 | 3.1:+88591932 | None:intergenic |
| TGCATCATCTCCTCCTCCAA+CGG | 0.556914 | 3.1:+88593150 | None:intergenic |
| CAGGAACAACAGTTGGAGGC+TGG | 0.557000 | 3.1:+88591936 | None:intergenic |
| CCTGGAGACAAGACCGTTGG+AGG | 0.557403 | 3.1:-88593163 | MS.gene23930:CDS |
| TGTGCATTGGTATGTTGGTG+AGG | 0.557980 | 3.1:-88591795 | MS.gene23930:CDS |
| TCACCACCAGGAACAACAGT+TGG | 0.562091 | 3.1:+88591929 | None:intergenic |
| GGAGACAAGACCGTTGGAGG+AGG | 0.562701 | 3.1:-88593160 | MS.gene23930:CDS |
| CAGCAACATCAGTGTGCTCA+AGG | 0.564079 | 3.1:+88592587 | None:intergenic |
| CAAGGAGGGAATGGGTTGAA+AGG | 0.564699 | 3.1:+88592605 | None:intergenic |
| CACCAAGAAACCTTGCAGAC+CGG | 0.566087 | 3.1:+88592780 | None:intergenic |
| TAACTCTACCAGTGTTGCTG+AGG | 0.566930 | 3.1:-88591870 | MS.gene23930:CDS |
| TTTGTGTCCTTCAGTTGGGA+AGG | 0.568538 | 3.1:-88592854 | MS.gene23930:intron |
| AAAGCATGAAATGGATCCTA+GGG | 0.569228 | 3.1:+88592221 | None:intergenic |
| ACACCAATCAACAAACTGAA+TGG | 0.571183 | 3.1:+88591988 | None:intergenic |
| ATACCGCACTTGAACCCAGT+TGG | 0.571477 | 3.1:+88591965 | None:intergenic |
| GTTGAAAGGACACTGTTGTA+GGG | 0.573119 | 3.1:+88592619 | None:intergenic |
| GGAAAACACCTCAGCAACAC+TGG | 0.575051 | 3.1:+88591862 | None:intergenic |
| AGAGACAAGGCGATTGAGGT+TGG | 0.575918 | 3.1:+88592495 | None:intergenic |
| ACCTGTTATCTCTGCTGAGA+AGG | 0.577342 | 3.1:-88592188 | MS.gene23930:CDS |
| AAACCTCAAAGAGGCAGTGA+GGG | 0.578416 | 3.1:+88592297 | None:intergenic |
| TGAGTTCTCTGAGGCTCGTG+AGG | 0.578430 | 3.1:-88591759 | MS.gene23930:CDS |
| AACCACAGAGGTAGAAACCT+GGG | 0.579213 | 3.1:+88592645 | None:intergenic |
| ATGCCTGGAGACAAGACCGT+TGG | 0.583327 | 3.1:-88593166 | MS.gene23930:CDS |
| ACCACGGGCGAAGTTGTTGG+CGG | 0.584023 | 3.1:+88592976 | None:intergenic |
| GAGAAGGATTATGAGGAGGT+TGG | 0.588091 | 3.1:-88591722 | MS.gene23930:CDS |
| GAACTTTACTGCCTTGAACA+CGG | 0.589043 | 3.1:-88593328 | MS.gene23930:CDS |
| TGATCTTGCCAAGGTCCAAA+GGG | 0.589383 | 3.1:-88591909 | MS.gene23930:CDS |
| AACATCAGTGTGCTCAAGGA+GGG | 0.590528 | 3.1:+88592591 | None:intergenic |
| AGTGTGCTCAAGGAGGGAAT+GGG | 0.591430 | 3.1:+88592597 | None:intergenic |
| TCCCCAGGTTTCTACCTCTG+TGG | 0.593813 | 3.1:-88592647 | MS.gene23930:CDS |
| CGATTGAGGTTGGTGTAAGT+GGG | 0.594949 | 3.1:+88592505 | None:intergenic |
| CCAACTTGGTTCCTTACCCT+AGG | 0.596446 | 3.1:-88592237 | MS.gene23930:CDS |
| GAAGAGTTGACGGTAAGCAC+CGG | 0.597156 | 3.1:+88593033 | None:intergenic |
| CAACCACAGAGGTAGAAACC+TGG | 0.597626 | 3.1:+88592644 | None:intergenic |
| AGATCTACGAAGACGGCGCG+TGG | 0.600243 | 3.1:+88593085 | None:intergenic |
| AAGGCAGTAAAGTTCCCAGC+AGG | 0.601634 | 3.1:+88593336 | None:intergenic |
| TTGTTGATCTATGCCTCGAT+AGG | 0.603776 | 3.1:-88592828 | MS.gene23930:CDS |
| AAGCTAGCAGATAACTGTAC+CGG | 0.604721 | 3.1:-88592799 | MS.gene23930:CDS |
| CCTCCAACTGTTGTTCCTGG+TGG | 0.605513 | 3.1:-88591932 | MS.gene23930:CDS |
| TTGGTGTTCAATGCTGTGGG+TGG | 0.611760 | 3.1:-88592763 | MS.gene23930:CDS |
| GCCGCCAACAACTTCGCCCG+TGG | 0.616675 | 3.1:-88592977 | MS.gene23930:CDS |
| GATAACTGTACCGGTCTGCA+AGG | 0.617527 | 3.1:-88592790 | MS.gene23930:CDS |
| AGATGATGTTGATGGAGATG+AGG | 0.621023 | 3.1:-88591681 | MS.gene23930:CDS |
| GGATCTTGCTGCTCTCGAGA+AGG | 0.621052 | 3.1:-88591738 | MS.gene23930:CDS |
| GCTAAGTGTGACCCTCGCCA+TGG | 0.621505 | 3.1:-88592100 | MS.gene23930:CDS |
| AGAGATAACAGGTGCGTACG+AGG | 0.631288 | 3.1:+88592198 | None:intergenic |
| ACTGCAGCATTCACGTCCTT+AGG | 0.632837 | 3.1:+88592034 | None:intergenic |
| CCTAGGGTAAGGAACCAAGT+TGG | 0.636144 | 3.1:+88592237 | None:intergenic |
| CTAGCTTTCGGATCCTATCG+AGG | 0.641945 | 3.1:+88592815 | None:intergenic |
| TGCTCCATCAAACCTCAAAG+AGG | 0.642331 | 3.1:+88592288 | None:intergenic |
| CGTACTGGTATAATGACCAC+GGG | 0.644337 | 3.1:+88592961 | None:intergenic |
| GGTCAAGCCGGTATCCAGGT+CGG | 0.648566 | 3.1:-88593364 | MS.gene23930:CDS |
| CACCCTGAACAACTCATCAG+CGG | 0.650288 | 3.1:-88593010 | MS.gene23930:CDS |
| TGTCCAACTGGGTTCAAGTG+CGG | 0.653024 | 3.1:-88591968 | MS.gene23930:CDS |
| CAACATCAGTGTGCTCAAGG+AGG | 0.655233 | 3.1:+88592590 | None:intergenic |
| TTGCAACCATCAAGACCAAG+AGG | 0.655579 | 3.1:-88592012 | MS.gene23930:CDS |
| TGGTTCCAGATCTACGAAGA+CGG | 0.658526 | 3.1:+88593078 | None:intergenic |
| CGCTGATGAGTTGTTCAGGG+TGG | 0.660350 | 3.1:+88593011 | None:intergenic |
| CAAACCTCAAAGAGGCAGTG+AGG | 0.663855 | 3.1:+88592296 | None:intergenic |
| ACGTACTGGTATAATGACCA+CGG | 0.670676 | 3.1:+88592960 | None:intergenic |
| ACCTTGGCAAGATCACCACC+AGG | 0.672683 | 3.1:+88591917 | None:intergenic |
| GGATACCGGCTTGACCAATG+TGG | 0.673011 | 3.1:+88593371 | None:intergenic |
| GAGTGCATTTCAATCCACAT+TGG | 0.673256 | 3.1:-88593385 | MS.gene23930:CDS |
| AAGTATATACCTGAGAGACA+AGG | 0.681840 | 3.1:+88592482 | None:intergenic |
| TCTCGAGAAGGATTATGAGG+AGG | 0.693923 | 3.1:-88591726 | MS.gene23930:CDS |
| ACCACAGAGGTAGAAACCTG+GGG | 0.712460 | 3.1:+88592646 | None:intergenic |
| GCTTGTTGTTTGATGTACCG+CGG | 0.713100 | 3.1:-88592067 | MS.gene23930:CDS |
| GGAAGAAGGTGAGTTCTCTG+AGG | 0.713464 | 3.1:-88591768 | MS.gene23930:CDS |
| GTTGTAGGGTTCAACCACAG+AGG | 0.742914 | 3.1:+88592633 | None:intergenic |
| CCTTAGGCACAACATCACCG+CGG | 0.844586 | 3.1:+88592050 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCTAGATCTCAAATTTA+GGG | - | chr3.1:88591800-88591819 | MS.gene23930:CDS | 20.0% |
| !! | TAATTCTAGATCTCAAATTT+AGG | - | chr3.1:88591799-88591818 | MS.gene23930:CDS | 20.0% |
| !!! | GAGATCTAGAATTAAAAAAA+TGG | + | chr3.1:88591793-88591812 | None:intergenic | 20.0% |
| ! | GAATTATGTAGCAAATATTG+AGG | - | chr3.1:88592653-88592672 | MS.gene23930:CDS | 25.0% |
| ! | TAACAACCAAATATAGAGAA+TGG | - | chr3.1:88592604-88592623 | MS.gene23930:CDS | 25.0% |
| ! | TATGGTAAAAAATCCAAGTT+GGG | - | chr3.1:88592376-88592395 | MS.gene23930:intron | 25.0% |
| ! | TTATGGTAAAAAATCCAAGT+TGG | - | chr3.1:88592375-88592394 | MS.gene23930:intron | 25.0% |
| ! | TTTCAATTGATTAATCGATG+CGG | - | chr3.1:88591850-88591869 | MS.gene23930:CDS | 25.0% |
| ATCAAACTTATGATCAATCC+TGG | + | chr3.1:88593226-88593245 | None:intergenic | 30.0% | |
| CAAGATCCATTCTCTATATT+TGG | + | chr3.1:88592613-88592632 | None:intergenic | 30.0% | |
| GGCATTCAGGTAATTAATTA+GGG | - | chr3.1:88591757-88591776 | MS.gene23930:CDS | 30.0% | |
| !!! | TTTGTTTGTTGTGCTTTTAC+AGG | - | chr3.1:88592735-88592754 | MS.gene23930:CDS | 30.0% |
| AAAGCATGAAATGGATCCTA+GGG | + | chr3.1:88592846-88592865 | None:intergenic | 35.0% | |
| AACAGAGTTTCAAACCAACT+TGG | - | chr3.1:88592813-88592832 | MS.gene23930:CDS | 35.0% | |
| AAGCTATCTATGACATATGC+AGG | - | chr3.1:88592515-88592534 | MS.gene23930:CDS | 35.0% | |
| AAGTATATACCTGAGAGACA+AGG | + | chr3.1:88592585-88592604 | None:intergenic | 35.0% | |
| ACACCAATCAACAAACTGAA+TGG | + | chr3.1:88593079-88593098 | None:intergenic | 35.0% | |
| ATAAACGGTAAAACCCAACT+TGG | + | chr3.1:88592392-88592411 | None:intergenic | 35.0% | |
| CGGCATTCAGGTAATTAATT+AGG | - | chr3.1:88591756-88591775 | MS.gene23930:CDS | 35.0% | |
| GATCTTGAAATGTTTGCGTT+TGG | - | chr3.1:88592626-88592645 | MS.gene23930:CDS | 35.0% | |
| ! | AACAAGCCATGTATTTTCCA+TGG | + | chr3.1:88592984-88593003 | None:intergenic | 35.0% |
| ! | ATGATTTGTGTCCTTCAGTT+GGG | - | chr3.1:88592206-88592225 | MS.gene23930:CDS | 35.0% |
| ! | GAGCGTTTATCTGTTGATTA+TGG | - | chr3.1:88592358-88592377 | MS.gene23930:intron | 35.0% |
| ! | TATGATTTGTGTCCTTCAGT+TGG | - | chr3.1:88592205-88592224 | MS.gene23930:CDS | 35.0% |
| ! | TTTTGAACCTTCTTCCATGA+TGG | - | chr3.1:88592942-88592961 | MS.gene23930:intron | 35.0% |
| !! | TACAGTTATCTGCTAGCTTT+CGG | + | chr3.1:88592264-88592283 | None:intergenic | 35.0% |
| AACAAACTGAATGGTCCTCT+TGG | + | chr3.1:88593070-88593089 | None:intergenic | 40.0% | |
| AAGCTAGCAGATAACTGTAC+CGG | - | chr3.1:88592265-88592284 | MS.gene23930:CDS | 40.0% | |
| AGTGAATGACGAAAACGTAC+TGG | + | chr3.1:88592121-88592140 | None:intergenic | 40.0% | |
| ATGAAATGGATCCTAGGGTA+AGG | + | chr3.1:88592841-88592860 | None:intergenic | 40.0% | |
| GAACTTTACTGCCTTGAACA+CGG | - | chr3.1:88591736-88591755 | MS.gene23930:CDS | 40.0% | |
| GAGTGCATTTCAATCCACAT+TGG | - | chr3.1:88591679-88591698 | MS.gene23930:CDS | 40.0% | |
| GTTGAAAGGACACTGTTGTA+GGG | + | chr3.1:88592448-88592467 | None:intergenic | 40.0% | |
| TTGTTGATCTATGCCTCGAT+AGG | - | chr3.1:88592236-88592255 | MS.gene23930:CDS | 40.0% | |
| ! | ACGTACTGGTATAATGACCA+CGG | + | chr3.1:88592107-88592126 | None:intergenic | 40.0% |
| ! | AGATGATGTTGATGGAGATG+AGG | - | chr3.1:88593383-88593402 | MS.gene23930:CDS | 40.0% |
| ! | GAAAGCATGAAATGGATCCT+AGG | + | chr3.1:88592847-88592866 | None:intergenic | 40.0% |
| ! | TTGTTGATTGGTGTCCAACT+GGG | - | chr3.1:88593085-88593104 | MS.gene23930:CDS | 40.0% |
| ! | TTTGTTGATTGGTGTCCAAC+TGG | - | chr3.1:88593084-88593103 | MS.gene23930:CDS | 40.0% |
| !! | AGAAGGTTCAAAAGCACTGT+TGG | + | chr3.1:88592935-88592954 | None:intergenic | 40.0% |
| !! | GCTTTTGTGCATTGGTATGT+TGG | - | chr3.1:88593264-88593283 | MS.gene23930:intron | 40.0% |
| !! | GGACCATTCAGTTTGTTGAT+TGG | - | chr3.1:88593073-88593092 | MS.gene23930:CDS | 40.0% |
| !! | TTCTTGGTGTTCAATGCTGT+GGG | - | chr3.1:88592298-88592317 | MS.gene23930:CDS | 40.0% |
| !! | TTTCTTGGTGTTCAATGCTG+TGG | - | chr3.1:88592297-88592316 | MS.gene23930:CDS | 40.0% |
| AAACCTCAAAGAGGCAGTGA+GGG | + | chr3.1:88592770-88592789 | None:intergenic | 45.0% | |
| AACACGTTCTTCAGCGAAAC+CGG | - | chr3.1:88591940-88591959 | MS.gene23930:CDS | 45.0% | |
| AACATCAGTGTGCTCAAGGA+GGG | + | chr3.1:88592476-88592495 | None:intergenic | 45.0% | |
| AACCACAGAGGTAGAAACCT+GGG | + | chr3.1:88592422-88592441 | None:intergenic | 45.0% | |
| AACCTGGGGAGATGGATAAA+CGG | + | chr3.1:88592407-88592426 | None:intergenic | 45.0% | |
| AAGAGAACCCAAACCAGATC+CGG | + | chr3.1:88592332-88592351 | None:intergenic | 45.0% | |
| ACAATCTCCTTCCCAACTGA+AGG | + | chr3.1:88592220-88592239 | None:intergenic | 45.0% | |
| ACCTGTTATCTCTGCTGAGA+AGG | - | chr3.1:88592876-88592895 | MS.gene23930:intron | 45.0% | |
| CACTTAGCCATCATGGAAGA+AGG | + | chr3.1:88592952-88592971 | None:intergenic | 45.0% | |
| CAGCAACAGAAAGCTGTTCA+TGG | + | chr3.1:88592906-88592925 | None:intergenic | 45.0% | |
| GAGAAGGATTATGAGGAGGT+TGG | - | chr3.1:88593342-88593361 | MS.gene23930:CDS | 45.0% | |
| GGTTGAAAGGACACTGTTGT+AGG | + | chr3.1:88592449-88592468 | None:intergenic | 45.0% | |
| GTCATTGACGAAGTCAGAAC+CGG | - | chr3.1:88592012-88592031 | MS.gene23930:CDS | 45.0% | |
| TCAATCCACATTGGTCAAGC+CGG | - | chr3.1:88591688-88591707 | MS.gene23930:CDS | 45.0% | |
| TCTCGAGAAGGATTATGAGG+AGG | - | chr3.1:88593338-88593357 | MS.gene23930:CDS | 45.0% | |
| TGATCTTGCCAAGGTCCAAA+GGG | - | chr3.1:88593155-88593174 | MS.gene23930:CDS | 45.0% | |
| TGCTCCATCAAACCTCAAAG+AGG | + | chr3.1:88592779-88592798 | None:intergenic | 45.0% | |
| TGCTCTCGAGAAGGATTATG+AGG | - | chr3.1:88593335-88593354 | MS.gene23930:CDS | 45.0% | |
| TGGTTCCAGATCTACGAAGA+CGG | + | chr3.1:88591989-88592008 | None:intergenic | 45.0% | |
| TTACCTGAATGCCGTGTTCA+AGG | + | chr3.1:88591750-88591769 | None:intergenic | 45.0% | |
| TTGCAACCATCAAGACCAAG+AGG | - | chr3.1:88593052-88593071 | MS.gene23930:CDS | 45.0% | |
| TTTGTGTCCTTCAGTTGGGA+AGG | - | chr3.1:88592210-88592229 | MS.gene23930:CDS | 45.0% | |
| ! | CCATGTATTTTCCATGGCGA+GGG | + | chr3.1:88592978-88592997 | None:intergenic | 45.0% |
| ! | CGTACGAGGAAAGCATGAAA+TGG | + | chr3.1:88592855-88592874 | None:intergenic | 45.0% |
| ! | CGTACTGGTATAATGACCAC+GGG | + | chr3.1:88592106-88592125 | None:intergenic | 45.0% |
| ! | GGTTCTGACTTCGTCAATGA+CGG | + | chr3.1:88592013-88592032 | None:intergenic | 45.0% |
| ! | GTGCATTGGTATGTTGGTGA+GGG | - | chr3.1:88593270-88593289 | MS.gene23930:intron | 45.0% |
| ! | TAACTCTACCAGTGTTGCTG+AGG | - | chr3.1:88593194-88593213 | MS.gene23930:intron | 45.0% |
| ! | TGGTTTGGGTTCTCTTCTGT+TGG | - | chr3.1:88592336-88592355 | MS.gene23930:intron | 45.0% |
| ! | TGTGCATTGGTATGTTGGTG+AGG | - | chr3.1:88593269-88593288 | MS.gene23930:intron | 45.0% |
| ! | TTGGTATGTTGGTGAGGGTA+TGG | - | chr3.1:88593275-88593294 | MS.gene23930:intron | 45.0% |
| !! | AATGGTCCTCTTGGTCTTGA+TGG | + | chr3.1:88593061-88593080 | None:intergenic | 45.0% |
| !! | ACTGCCTCTTTGAGGTTTGA+TGG | - | chr3.1:88592772-88592791 | MS.gene23930:CDS | 45.0% |
| !! | CGATTGAGGTTGGTGTAAGT+GGG | + | chr3.1:88592562-88592581 | None:intergenic | 45.0% |
| !! | GCTTGTTGTTTGATGTACCG+CGG | - | chr3.1:88592997-88593016 | MS.gene23930:CDS | 45.0% |
| !! | GGTGATGGAGATGATGTTGA+TGG | - | chr3.1:88593375-88593394 | MS.gene23930:CDS | 45.0% |
| !!! | GGTGTTGTTTTTCAGCCTGA+TGG | - | chr3.1:88591871-88591890 | MS.gene23930:CDS | 45.0% |
| AAGGCAGTAAAGTTCCCAGC+AGG | + | chr3.1:88591731-88591750 | None:intergenic | 50.0% | |
| ACCACAGAGGTAGAAACCTG+GGG | + | chr3.1:88592421-88592440 | None:intergenic | 50.0% | |
| ACTGCAGCATTCACGTCCTT+AGG | + | chr3.1:88593033-88593052 | None:intergenic | 50.0% | |
| AGAGACAAGGCGATTGAGGT+TGG | + | chr3.1:88592572-88592591 | None:intergenic | 50.0% | |
| AGAGATAACAGGTGCGTACG+AGG | + | chr3.1:88592869-88592888 | None:intergenic | 50.0% | |
| AGATCATGCACACAGCCCTT+TGG | + | chr3.1:88593173-88593192 | None:intergenic | 50.0% | |
| AGGGTCACACTTAGCCATCA+TGG | + | chr3.1:88592959-88592978 | None:intergenic | 50.0% | |
| AGTGTGCTCAAGGAGGGAAT+GGG | + | chr3.1:88592470-88592489 | None:intergenic | 50.0% | |
| ATACCGCACTTGAACCCAGT+TGG | + | chr3.1:88593102-88593121 | None:intergenic | 50.0% | |
| CAAACCTCAAAGAGGCAGTG+AGG | + | chr3.1:88592771-88592790 | None:intergenic | 50.0% | |
| CAACATCAGTGTGCTCAAGG+AGG | + | chr3.1:88592477-88592496 | None:intergenic | 50.0% | |
| CAACCACAGAGGTAGAAACC+TGG | + | chr3.1:88592423-88592442 | None:intergenic | 50.0% | |
| CACCAAGAAACCTTGCAGAC+CGG | + | chr3.1:88592287-88592306 | None:intergenic | 50.0% | |
| CACCCTGAACAACTCATCAG+CGG | - | chr3.1:88592054-88592073 | MS.gene23930:CDS | 50.0% | |
| CAGCAACATCAGTGTGCTCA+AGG | + | chr3.1:88592480-88592499 | None:intergenic | 50.0% | |
| CCAACTTGGTTCCTTACCCT+AGG | - | chr3.1:88592827-88592846 | MS.gene23930:CDS | 50.0% | |
| CCCTCGCCATGGAAAATACA+TGG | - | chr3.1:88592975-88592994 | MS.gene23930:CDS | 50.0% | |
| CCTAGGGTAAGGAACCAAGT+TGG | + | chr3.1:88592830-88592849 | None:intergenic | 50.0% | |
| CTGACTTCGTCAATGACGGT+TGG | + | chr3.1:88592009-88592028 | None:intergenic | 50.0% | |
| GAAGAGTTGACGGTAAGCAC+CGG | + | chr3.1:88592034-88592053 | None:intergenic | 50.0% | |
| GCCTTCTCAGCAGAGATAAC+AGG | + | chr3.1:88592880-88592899 | None:intergenic | 50.0% | |
| GGAAAACACCTCAGCAACAC+TGG | + | chr3.1:88593205-88593224 | None:intergenic | 50.0% | |
| GGAAGAAGGTGAGTTCTCTG+AGG | - | chr3.1:88593296-88593315 | MS.gene23930:intron | 50.0% | |
| GTGATCTTGCCAAGGTCCAA+AGG | - | chr3.1:88593154-88593173 | MS.gene23930:CDS | 50.0% | |
| GTTCAGGGTGGAAGAGTTGA+CGG | + | chr3.1:88592044-88592063 | None:intergenic | 50.0% | |
| GTTGTAGGGTTCAACCACAG+AGG | + | chr3.1:88592434-88592453 | None:intergenic | 50.0% | |
| TACCGGTCTGCAAGGTTTCT+TGG | - | chr3.1:88592282-88592301 | MS.gene23930:CDS | 50.0% | |
| TACCGTTTATCCATCTCCCC+AGG | - | chr3.1:88592402-88592421 | MS.gene23930:intron | 50.0% | |
| TCACCACCAGGAACAACAGT+TGG | + | chr3.1:88593138-88593157 | None:intergenic | 50.0% | |
| TGCATCATCTCCTCCTCCAA+CGG | + | chr3.1:88591917-88591936 | None:intergenic | 50.0% | |
| TGCCGCTGATGAGTTGTTCA+GGG | + | chr3.1:88592059-88592078 | None:intergenic | 50.0% | |
| TGTCCAACTGGGTTCAAGTG+CGG | - | chr3.1:88593096-88593115 | MS.gene23930:CDS | 50.0% | |
| TTGCCGCTGATGAGTTGTTC+AGG | + | chr3.1:88592060-88592079 | None:intergenic | 50.0% | |
| ! | CCAAGCGTGCTTTTGTGCAT+TGG | - | chr3.1:88593256-88593275 | MS.gene23930:intron | 50.0% |
| ! | CCAATGCACAAAAGCACGCT+TGG | + | chr3.1:88593259-88593278 | None:intergenic | 50.0% |
| ! | CTAGCTTTCGGATCCTATCG+AGG | + | chr3.1:88592252-88592271 | None:intergenic | 50.0% |
| ! | GATAACTGTACCGGTCTGCA+AGG | - | chr3.1:88592274-88592293 | MS.gene23930:CDS | 50.0% |
| ! | GCCATGTATTTTCCATGGCG+AGG | + | chr3.1:88592979-88592998 | None:intergenic | 50.0% |
| ! | GTTGGTGAGGGTATGGAAGA+AGG | - | chr3.1:88593282-88593301 | MS.gene23930:intron | 50.0% |
| ! | TTGGTGTTCAATGCTGTGGG+TGG | - | chr3.1:88592301-88592320 | MS.gene23930:CDS | 50.0% |
| !! | CAAGGAGGGAATGGGTTGAA+AGG | + | chr3.1:88592462-88592481 | None:intergenic | 50.0% |
| !! | GCGATTGAGGTTGGTGTAAG+TGG | + | chr3.1:88592563-88592582 | None:intergenic | 50.0% |
| !! | GTGTTGCTGAGGTGTTTTCC+AGG | - | chr3.1:88593205-88593224 | MS.gene23930:intron | 50.0% |
| ACCTTGGCAAGATCACCACC+AGG | + | chr3.1:88593150-88593169 | None:intergenic | 55.0% | |
| ATGACCACGGGCGAAGTTGT+TGG | + | chr3.1:88592094-88592113 | None:intergenic | 55.0% | |
| ATGCCTGGAGACAAGACCGT+TGG | - | chr3.1:88591898-88591917 | MS.gene23930:CDS | 55.0% | |
| CAGCCTCCAACTGTTGTTCC+TGG | - | chr3.1:88593129-88593148 | MS.gene23930:CDS | 55.0% | |
| CAGGAACAACAGTTGGAGGC+TGG | + | chr3.1:88593131-88593150 | None:intergenic | 55.0% | |
| CAGTGTGCTCAAGGAGGGAA+TGG | + | chr3.1:88592471-88592490 | None:intergenic | 55.0% | |
| CATCCCTCACTGCCTCTTTG+AGG | - | chr3.1:88592764-88592783 | MS.gene23930:CDS | 55.0% | |
| CATTGGTCAAGCCGGTATCC+AGG | - | chr3.1:88591696-88591715 | MS.gene23930:CDS | 55.0% | |
| CCACCAGGAACAACAGTTGG+AGG | + | chr3.1:88593135-88593154 | None:intergenic | 55.0% | |
| CCTCAATCGCCTTGTCTCTC+AGG | - | chr3.1:88592573-88592592 | MS.gene23930:CDS | 55.0% | |
| CCTCCAACTGTTGTTCCTGG+TGG | - | chr3.1:88593132-88593151 | MS.gene23930:CDS | 55.0% | |
| CCTGAGAGACAAGGCGATTG+AGG | + | chr3.1:88592576-88592595 | None:intergenic | 55.0% | |
| CCTTAGGCACAACATCACCG+CGG | + | chr3.1:88593017-88593036 | None:intergenic | 55.0% | |
| CGCTGATGAGTTGTTCAGGG+TGG | + | chr3.1:88592056-88592075 | None:intergenic | 55.0% | |
| CTGCCTTGAACACGGCATTC+AGG | - | chr3.1:88591744-88591763 | MS.gene23930:CDS | 55.0% | |
| GAGGTAGAAACCTGGGGAGA+TGG | + | chr3.1:88592415-88592434 | None:intergenic | 55.0% | |
| GGATCTTGCTGCTCTCGAGA+AGG | - | chr3.1:88593326-88593345 | MS.gene23930:CDS | 55.0% | |
| GGCATTTCCGACCTGGATAC+CGG | + | chr3.1:88591710-88591729 | None:intergenic | 55.0% | |
| GTGTTCAATGCTGTGGGTGG+TGG | - | chr3.1:88592304-88592323 | MS.gene23930:CDS | 55.0% | |
| TCCCCAGGTTTCTACCTCTG+TGG | - | chr3.1:88592417-88592436 | MS.gene23930:intron | 55.0% | |
| TGGAACATGCTTTCCGGCAC+CGG | + | chr3.1:88591962-88591981 | None:intergenic | 55.0% | |
| TGGTGGAACCGGATCTGGTT+TGG | - | chr3.1:88592321-88592340 | MS.gene23930:intron | 55.0% | |
| TTCTTCAGCGAAACCGGTGC+CGG | - | chr3.1:88591946-88591965 | MS.gene23930:CDS | 55.0% | |
| ! | GGTGGAACCGGATCTGGTTT+GGG | - | chr3.1:88592322-88592341 | MS.gene23930:intron | 55.0% |
| ! | TCCTGGTGGTGATCTTGCCA+AGG | - | chr3.1:88593146-88593165 | MS.gene23930:CDS | 55.0% |
| !! | AATGCTGTGGGTGGTGGAAC+CGG | - | chr3.1:88592310-88592329 | MS.gene23930:CDS | 55.0% |
| !! | GGATACCGGCTTGACCAATG+TGG | + | chr3.1:88591696-88591715 | None:intergenic | 55.0% |
| !! | GTTGGTGCTGAGTCTGGTGA+TGG | - | chr3.1:88593360-88593379 | MS.gene23930:CDS | 55.0% |
| !! | TGAGTTCTCTGAGGCTCGTG+AGG | - | chr3.1:88593305-88593324 | MS.gene23930:intron | 55.0% |
| ACCACGGGCGAAGTTGTTGG+CGG | + | chr3.1:88592091-88592110 | None:intergenic | 60.0% | |
| ACGCGCCGTCTTCGTAGATC+TGG | - | chr3.1:88591981-88592000 | MS.gene23930:CDS | 60.0% | |
| AGATCTACGAAGACGGCGCG+TGG | + | chr3.1:88591982-88592001 | None:intergenic | 60.0% | |
| CCAGGTCGGAAATGCCTGCT+GGG | - | chr3.1:88591714-88591733 | MS.gene23930:CDS | 60.0% | |
| CCGCGGTGATGTTGTGCCTA+AGG | - | chr3.1:88593014-88593033 | MS.gene23930:CDS | 60.0% | |
| CCTGGAGACAAGACCGTTGG+AGG | - | chr3.1:88591901-88591920 | MS.gene23930:CDS | 60.0% | |
| GCACACAGCCCTTTGGACCT+TGG | + | chr3.1:88593166-88593185 | None:intergenic | 60.0% | |
| GCTAAGTGTGACCCTCGCCA+TGG | - | chr3.1:88592964-88592983 | MS.gene23930:intron | 60.0% | |
| GGAGACAAGACCGTTGGAGG+AGG | - | chr3.1:88591904-88591923 | MS.gene23930:CDS | 60.0% | |
| GGCGCGTGGAACATGCTTTC+CGG | + | chr3.1:88591968-88591987 | None:intergenic | 60.0% | |
| GGTCAAGCCGGTATCCAGGT+CGG | - | chr3.1:88591700-88591719 | MS.gene23930:CDS | 60.0% | |
| TCCAGGTCGGAAATGCCTGC+TGG | - | chr3.1:88591713-88591732 | MS.gene23930:CDS | 60.0% | |
| TCTCCAGGCATCTGGCCATC+AGG | + | chr3.1:88591889-88591908 | None:intergenic | 60.0% | |
| ! | CCTCCAACGGTCTTGTCTCC+AGG | + | chr3.1:88591904-88591923 | None:intergenic | 60.0% |
| ! | CGGTCTTGTCTCCAGGCATC+TGG | + | chr3.1:88591897-88591916 | None:intergenic | 60.0% |
| !! | GAGGAGGTTGGTGCTGAGTC+TGG | - | chr3.1:88593354-88593373 | MS.gene23930:CDS | 60.0% |
| CAGCCTGATGGCCAGATGCC+TGG | - | chr3.1:88591883-88591902 | MS.gene23930:CDS | 65.0% | |
| CCCAGCAGGCATTTCCGACC+TGG | + | chr3.1:88591717-88591736 | None:intergenic | 65.0% | |
| !! | GTGGGTGGTGGAACCGGATC+TGG | - | chr3.1:88592316-88592335 | MS.gene23930:intron | 65.0% |
| GCCGCCAACAACTTCGCCCG+TGG | - | chr3.1:88592087-88592106 | MS.gene23930:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 88591673 | 88593413 | 88591673 | ID=MS.gene23930 |
| chr3.1 | mRNA | 88591673 | 88593413 | 88591673 | ID=MS.gene23930.t1;Parent=MS.gene23930 |
| chr3.1 | exon | 88593321 | 88593413 | 88593321 | ID=MS.gene23930.t1.exon1;Parent=MS.gene23930.t1 |
| chr3.1 | CDS | 88593321 | 88593413 | 88593321 | ID=cds.MS.gene23930.t1;Parent=MS.gene23930.t1 |
| chr3.1 | exon | 88592966 | 88593200 | 88592966 | ID=MS.gene23930.t1.exon2;Parent=MS.gene23930.t1 |
| chr3.1 | CDS | 88592966 | 88593200 | 88592966 | ID=cds.MS.gene23930.t1;Parent=MS.gene23930.t1 |
| chr3.1 | exon | 88592492 | 88592862 | 88592492 | ID=MS.gene23930.t1.exon3;Parent=MS.gene23930.t1 |
| chr3.1 | CDS | 88592492 | 88592862 | 88592492 | ID=cds.MS.gene23930.t1;Parent=MS.gene23930.t1 |
| chr3.1 | exon | 88591673 | 88592329 | 88591673 | ID=MS.gene23930.t1.exon4;Parent=MS.gene23930.t1 |
| chr3.1 | CDS | 88591673 | 88592329 | 88591673 | ID=cds.MS.gene23930.t1;Parent=MS.gene23930.t1 |
| Gene Sequence |
| Protein sequence |
