Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01518.t1 | XP_003593713.2 | 97.4 | 196 | 5 | 0 | 1 | 196 | 1 | 196 | 3.10E-103 | 384.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01518.t1 | P0C8K6 | 55.0 | 191 | 75 | 3 | 6 | 190 | 309 | 494 | 1.7e-49 | 197.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01518.t1 | G7IK82 | 97.4 | 196 | 5 | 0 | 1 | 196 | 1 | 196 | 2.3e-103 | 384.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene01518 | MS.gene036254 | PPI |
| MS.gene01518 | MS.gene009509 | PPI |
| MS.gene01518 | MS.gene92650 | PPI |
| MS.gene01518 | MS.gene51967 | PPI |
| MS.gene63427 | MS.gene01518 | PPI |
| MS.gene01518 | MS.gene51964 | PPI |
| MS.gene01518 | MS.gene40016 | PPI |
| MS.gene01518 | MS.gene004699 | PPI |
| MS.gene95934 | MS.gene01518 | PPI |
| MS.gene51687 | MS.gene01518 | PPI |
| MS.gene01518 | MS.gene019081 | PPI |
| MS.gene01518 | MS.gene32083 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01518.t1 | MTR_2g015360 | 97.449 | 196 | 5 | 0 | 1 | 196 | 1 | 196 | 3.14e-142 | 394 |
| MS.gene01518.t1 | MTR_3g035710 | 53.543 | 127 | 53 | 3 | 60 | 185 | 1 | 122 | 7.93e-34 | 117 |
| MS.gene01518.t1 | MTR_0002s0800 | 52.066 | 121 | 52 | 3 | 66 | 185 | 1 | 116 | 3.03e-29 | 108 |
| MS.gene01518.t1 | MTR_0002s0360 | 52.066 | 121 | 52 | 3 | 66 | 185 | 1 | 116 | 3.03e-29 | 108 |
| MS.gene01518.t1 | MTR_3g037420 | 50.442 | 113 | 50 | 3 | 74 | 185 | 10 | 117 | 5.56e-25 | 95.1 |
| MS.gene01518.t1 | MTR_4g051430 | 46.512 | 129 | 43 | 4 | 58 | 185 | 259 | 362 | 3.24e-23 | 95.5 |
| MS.gene01518.t1 | MTR_8g102110 | 50.000 | 98 | 46 | 2 | 69 | 165 | 13 | 108 | 6.01e-22 | 86.7 |
| MS.gene01518.t1 | MTR_7g076940 | 40.171 | 117 | 64 | 3 | 51 | 161 | 98 | 214 | 1.47e-18 | 81.3 |
| MS.gene01518.t1 | MTR_5g021800 | 38.462 | 117 | 66 | 3 | 51 | 161 | 98 | 214 | 7.51e-18 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene01518.t1 | AT2G44065 | 63.265 | 196 | 68 | 3 | 1 | 192 | 5 | 200 | 8.98e-81 | 239 |
| MS.gene01518.t1 | AT2G44065 | 63.265 | 196 | 68 | 3 | 1 | 192 | 5 | 200 | 8.98e-81 | 239 |
| MS.gene01518.t1 | AT2G44065 | 63.265 | 196 | 68 | 3 | 1 | 192 | 5 | 200 | 8.98e-81 | 239 |
| MS.gene01518.t1 | ATCG00830 | 49.296 | 142 | 66 | 3 | 45 | 185 | 118 | 254 | 7.92e-35 | 124 |
| MS.gene01518.t1 | ATCG01310 | 49.296 | 142 | 66 | 3 | 45 | 185 | 118 | 254 | 7.92e-35 | 124 |
| MS.gene01518.t1 | AT3G51190 | 44.167 | 120 | 61 | 3 | 48 | 161 | 96 | 215 | 5.68e-23 | 92.8 |
| MS.gene01518.t1 | AT2G18020 | 40.171 | 117 | 64 | 3 | 51 | 161 | 98 | 214 | 2.29e-19 | 83.2 |
| MS.gene01518.t1 | AT4G36130 | 39.316 | 117 | 65 | 3 | 51 | 161 | 98 | 214 | 1.70e-18 | 80.9 |
Find 67 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCGGAGACCGGTTGTTC+GGG | 0.303224 | 2.2:+67918531 | MS.gene01518:CDS |
| GAAAGGTTCCCGCACTCCTT+GGG | 0.303625 | 2.2:+67918627 | MS.gene01518:CDS |
| GGCAAGGTGGAAAGCTTGTT+CGG | 0.328555 | 2.2:+67918332 | MS.gene01518:CDS |
| GGAAAGGTTCCCGCACTCCT+TGG | 0.342701 | 2.2:+67918626 | MS.gene01518:CDS |
| TCAATCGGAGACCGGTTGTT+CGG | 0.360479 | 2.2:+67918530 | MS.gene01518:CDS |
| ACAAGCTTTCCACCTTGCCC+TGG | 0.376766 | 2.2:-67918328 | None:intergenic |
| GCTCTTCGCCGTTTCTCTAC+TGG | 0.378938 | 2.2:+67917814 | MS.gene01518:CDS |
| CCTCTCTCTTCAATGCGAAT+TGG | 0.385769 | 2.2:+67918277 | MS.gene01518:CDS |
| CCCAATCTGTGAGTTTATAT+CGG | 0.390437 | 2.2:-67918245 | None:intergenic |
| CTCTTTCAAGATCTTTGCAT+TGG | 0.403607 | 2.2:-67918365 | None:intergenic |
| GGAAAGCTTGTTCGGGCAGC+TGG | 0.433411 | 2.2:+67918340 | MS.gene01518:CDS |
| CCACCATGAGGATGATCAAC+AGG | 0.434719 | 2.2:-67918568 | None:intergenic |
| TCCGATATAAACTCACAGAT+TGG | 0.434854 | 2.2:+67918244 | MS.gene01518:CDS |
| GCAAGAGTAGTGGTGGGTGG+GGG | 0.456389 | 2.2:+67918605 | MS.gene01518:CDS |
| GCAAGGTGGAAAGCTTGTTC+GGG | 0.464379 | 2.2:+67918333 | MS.gene01518:CDS |
| TCCTTGGGGTAAGCCAACTA+AGG | 0.465838 | 2.2:+67918642 | MS.gene01518:CDS |
| CAAGCTTTCCACCTTGCCCT+GGG | 0.466095 | 2.2:-67918327 | None:intergenic |
| AGCAAGAGTAGTGGTGGGTG+GGG | 0.467612 | 2.2:+67918604 | MS.gene01518:CDS |
| GTCATAGCAGATGGCTCAAT+CGG | 0.474048 | 2.2:+67918515 | MS.gene01518:CDS |
| GTCTTGAAACCACCCTTAGT+TGG | 0.475603 | 2.2:-67918655 | None:intergenic |
| ATAGCCACACCCCGAACAAC+CGG | 0.484023 | 2.2:-67918541 | None:intergenic |
| GAGCAAGAGTAGTGGTGGGT+GGG | 0.491341 | 2.2:+67918603 | MS.gene01518:CDS |
| CCGATATAAACTCACAGATT+GGG | 0.494054 | 2.2:+67918245 | MS.gene01518:CDS |
| ACCTACTTTCTGCGCTTAAG+AGG | 0.496195 | 2.2:-67918682 | None:intergenic |
| GACTAAAACGTATGCTGATG+TGG | 0.504252 | 2.2:-67918389 | None:intergenic |
| ACTAAGGGTGGTTTCAAGAC+TGG | 0.508103 | 2.2:+67918658 | MS.gene01518:CDS |
| CATCCTCATGGTGGAGGAGA+GGG | 0.510436 | 2.2:+67918577 | MS.gene01518:CDS |
| GGCAAGAGCAAGAGTAGTGG+TGG | 0.514209 | 2.2:+67918598 | MS.gene01518:CDS |
| GGTTTCAAACGGTATTCCTC+AGG | 0.517827 | 2.2:+67918198 | MS.gene01518:CDS |
| AGAGAAACGGCGAAGAGCAT+TGG | 0.520863 | 2.2:-67917809 | None:intergenic |
| CACAACATTGAGCTGAACCC+AGG | 0.522651 | 2.2:+67918310 | MS.gene01518:CDS |
| AGCTTGCGATCACCGTGAGT+TGG | 0.524709 | 2.2:-67918481 | None:intergenic |
| CCCTTAGTTGGCTTACCCCA+AGG | 0.529403 | 2.2:-67918643 | None:intergenic |
| CGGTGATCGCAAGCTTAAGA+AGG | 0.531996 | 2.2:+67918489 | MS.gene01518:CDS |
| TGGCTTACCCCAAGGAGTGC+GGG | 0.536501 | 2.2:-67918635 | None:intergenic |
| AGTTGATTGATACTCGATGC+AGG | 0.537593 | 2.2:+67918434 | MS.gene01518:CDS |
| GAGACCGGTTGTTCGGGGTG+TGG | 0.544072 | 2.2:+67918537 | MS.gene01518:CDS |
| GGAGAGTACCAGTAGAGAAA+CGG | 0.544295 | 2.2:-67917822 | None:intergenic |
| ATCCTCTCGCGTGCCTCCTG+AGG | 0.558960 | 2.2:-67918214 | None:intergenic |
| AGAGCAAGAGTAGTGGTGGG+TGG | 0.571408 | 2.2:+67918602 | MS.gene01518:CDS |
| CAGATGGCTCAATCGGAGAC+CGG | 0.579156 | 2.2:+67918522 | MS.gene01518:CDS |
| GATCGCAAGCTTAAGAAGGC+TGG | 0.579493 | 2.2:+67918493 | MS.gene01518:CDS |
| AAAGGTTCCCGCACTCCTTG+GGG | 0.579787 | 2.2:+67918628 | MS.gene01518:CDS |
| GTTGATCATCCTCATGGTGG+AGG | 0.581691 | 2.2:+67918571 | MS.gene01518:CDS |
| AGAAGGCTGGTCATAGCAGA+TGG | 0.589752 | 2.2:+67918506 | MS.gene01518:CDS |
| ATTGAGCTGAACCCAGGGCA+AGG | 0.590026 | 2.2:+67918316 | MS.gene01518:CDS |
| ACCTCTTAAGCGCAGAAAGT+AGG | 0.597433 | 2.2:+67918681 | MS.gene01518:CDS |
| CCAATTCGCATTGAAGAGAG+AGG | 0.603282 | 2.2:-67918277 | None:intergenic |
| TGGGGTAAGCCAACTAAGGG+TGG | 0.604152 | 2.2:+67918646 | MS.gene01518:CDS |
| AATCGGAGACCGGTTGTTCG+GGG | 0.609554 | 2.2:+67918532 | MS.gene01518:CDS |
| ACAACATTGAGCTGAACCCA+GGG | 0.610164 | 2.2:+67918311 | MS.gene01518:CDS |
| GAGGGCAAGAGCAAGAGTAG+TGG | 0.611159 | 2.2:+67918595 | MS.gene01518:CDS |
| TCATCCTCATGGTGGAGGAG+AGG | 0.611896 | 2.2:+67918576 | MS.gene01518:CDS |
| TTGGCTTACCCCAAGGAGTG+CGG | 0.612529 | 2.2:-67918636 | None:intergenic |
| TTCAAACGGTATTCCTCAGG+AGG | 0.616156 | 2.2:+67918201 | MS.gene01518:CDS |
| TTGCCCTCTCCTCCACCATG+AGG | 0.616499 | 2.2:-67918580 | None:intergenic |
| CCTTGGGGTAAGCCAACTAA+GGG | 0.618496 | 2.2:+67918643 | MS.gene01518:CDS |
| AATCCTGTTGATCATCCTCA+TGG | 0.627342 | 2.2:+67918565 | MS.gene01518:CDS |
| ACTCGATGCAGGGCCACTGT+CGG | 0.629111 | 2.2:+67918445 | MS.gene01518:CDS |
| GTTGATTGATACTCGATGCA+GGG | 0.629838 | 2.2:+67918435 | MS.gene01518:CDS |
| GCAAGAGCAAGAGTAGTGGT+GGG | 0.633900 | 2.2:+67918599 | MS.gene01518:CDS |
| TTCCTCAGGAGGCACGCGAG+AGG | 0.634562 | 2.2:+67918212 | MS.gene01518:CDS |
| ACTAAAACGTATGCTGATGT+GGG | 0.662637 | 2.2:-67918388 | None:intergenic |
| CCTGTTGATCATCCTCATGG+TGG | 0.678152 | 2.2:+67918568 | MS.gene01518:CDS |
| ACTGTCTCTAATCCAACTCA+CGG | 0.682936 | 2.2:+67918469 | MS.gene01518:CDS |
| GAGCTGAACCCAGGGCAAGG+TGG | 0.703850 | 2.2:+67918319 | MS.gene01518:CDS |
| ATTAGAGACAGTACCGACAG+TGG | 0.717055 | 2.2:-67918458 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAATATTGATCTAAACAT+TGG | - | chr2.2:67917885-67917904 | None:intergenic | 20.0% |
| !! | GAAATAAATTATGTAGCTTT+GGG | + | chr2.2:67917935-67917954 | MS.gene01518:intron | 20.0% |
| !! | TGAAATAAATTATGTAGCTT+TGG | + | chr2.2:67917934-67917953 | MS.gene01518:intron | 20.0% |
| !!! | AAATAAATTATGTAGCTTTG+GGG | + | chr2.2:67917936-67917955 | MS.gene01518:intron | 20.0% |
| !!! | CTAGTTGAATCATTTAATTT+CGG | + | chr2.2:67918118-67918137 | MS.gene01518:intron | 20.0% |
| ! | AAATGTAGAAAATATGCGAA+AGG | - | chr2.2:67917846-67917865 | None:intergenic | 25.0% |
| ! | ATCAACTTTTTAACACCAGA+TGG | - | chr2.2:67918421-67918440 | None:intergenic | 30.0% |
| ! | CTGCTTTAAACTACTTGATT+TGG | + | chr2.2:67918034-67918053 | MS.gene01518:intron | 30.0% |
| ! | TGAATCATTTAATTTCGGCT+CGG | + | chr2.2:67918123-67918142 | MS.gene01518:intron | 30.0% |
| ! | TTTTAACACCAGATGGTAAT+TGG | - | chr2.2:67918414-67918433 | None:intergenic | 30.0% |
| !!! | TTTTTAGCTGAGGTTTCAAA+CGG | + | chr2.2:67918187-67918206 | MS.gene01518:intron | 30.0% |
| AACCAATATTGTCCATGGTT+CGG | - | chr2.2:67918088-67918107 | None:intergenic | 35.0% | |
| ACTAAAACGTATGCTGATGT+GGG | - | chr2.2:67918391-67918410 | None:intergenic | 35.0% | |
| CCCAATCTGTGAGTTTATAT+CGG | - | chr2.2:67918248-67918267 | None:intergenic | 35.0% | |
| CCGATATAAACTCACAGATT+GGG | + | chr2.2:67918245-67918264 | MS.gene01518:CDS | 35.0% | |
| CTCTTTCAAGATCTTTGCAT+TGG | - | chr2.2:67918368-67918387 | None:intergenic | 35.0% | |
| TCCGATATAAACTCACAGAT+TGG | + | chr2.2:67918244-67918263 | MS.gene01518:CDS | 35.0% | |
| TTGTGAACCAATATTGTCCA+TGG | - | chr2.2:67918093-67918112 | None:intergenic | 35.0% | |
| ! | TTGGGGTTTAGGTTCAATTA+TGG | + | chr2.2:67917953-67917972 | MS.gene01518:intron | 35.0% |
| !! | ATTATGTAGCTTTGGGGTTT+AGG | + | chr2.2:67917942-67917961 | MS.gene01518:intron | 35.0% |
| !! | GTTTTAGTCCAATTACCATC+TGG | + | chr2.2:67918403-67918422 | MS.gene01518:CDS | 35.0% |
| !!! | TCTGTTTGTCTTTTTAGCTG+AGG | + | chr2.2:67918177-67918196 | MS.gene01518:intron | 35.0% |
| AAATGGTCCTATGTCTGGTT+CGG | - | chr2.2:67918000-67918019 | None:intergenic | 40.0% | |
| AACCAGACATAGGACCATTT+GGG | + | chr2.2:67918000-67918019 | MS.gene01518:intron | 40.0% | |
| AACCGAACCATGGACAATAT+TGG | + | chr2.2:67918083-67918102 | MS.gene01518:intron | 40.0% | |
| AATCCTGTTGATCATCCTCA+TGG | + | chr2.2:67918565-67918584 | MS.gene01518:CDS | 40.0% | |
| ACTGTCTCTAATCCAACTCA+CGG | + | chr2.2:67918469-67918488 | MS.gene01518:CDS | 40.0% | |
| AGTTGATTGATACTCGATGC+AGG | + | chr2.2:67918434-67918453 | MS.gene01518:CDS | 40.0% | |
| CTGTTCAAATAACCGAACCA+TGG | + | chr2.2:67918073-67918092 | MS.gene01518:intron | 40.0% | |
| GACTAAAACGTATGCTGATG+TGG | - | chr2.2:67918392-67918411 | None:intergenic | 40.0% | |
| GTTGATTGATACTCGATGCA+GGG | + | chr2.2:67918435-67918454 | MS.gene01518:CDS | 40.0% | |
| TCAAAAACCGAACCAGACAT+AGG | + | chr2.2:67917990-67918009 | MS.gene01518:intron | 40.0% | |
| ACAACATTGAGCTGAACCCA+GGG | + | chr2.2:67918311-67918330 | MS.gene01518:CDS | 45.0% | |
| ACATAGGACCATTTGGGTCA+TGG | + | chr2.2:67918006-67918025 | MS.gene01518:intron | 45.0% | |
| ACTAAGGGTGGTTTCAAGAC+TGG | + | chr2.2:67918658-67918677 | MS.gene01518:CDS | 45.0% | |
| CAGTTGAACCATGACCCAAA+TGG | - | chr2.2:67918017-67918036 | None:intergenic | 45.0% | |
| CCAATTCGCATTGAAGAGAG+AGG | - | chr2.2:67918280-67918299 | None:intergenic | 45.0% | |
| CCTCTCTCTTCAATGCGAAT+TGG | + | chr2.2:67918277-67918296 | MS.gene01518:CDS | 45.0% | |
| GAACCAGACATAGGACCATT+TGG | + | chr2.2:67917999-67918018 | MS.gene01518:intron | 45.0% | |
| GGTTTCAAACGGTATTCCTC+AGG | + | chr2.2:67918198-67918217 | MS.gene01518:CDS | 45.0% | |
| GTCATAGCAGATGGCTCAAT+CGG | + | chr2.2:67918515-67918534 | MS.gene01518:CDS | 45.0% | |
| GTCTTGAAACCACCCTTAGT+TGG | - | chr2.2:67918658-67918677 | None:intergenic | 45.0% | |
| TTCAAACGGTATTCCTCAGG+AGG | + | chr2.2:67918201-67918220 | MS.gene01518:CDS | 45.0% | |
| !! | ATTAGAGACAGTACCGACAG+TGG | - | chr2.2:67918461-67918480 | None:intergenic | 45.0% |
| !! | GGAGAGTACCAGTAGAGAAA+CGG | - | chr2.2:67917825-67917844 | None:intergenic | 45.0% |
| CACAACATTGAGCTGAACCC+AGG | + | chr2.2:67918310-67918329 | MS.gene01518:CDS | 50.0% | |
| CCACCATGAGGATGATCAAC+AGG | - | chr2.2:67918571-67918590 | None:intergenic | 50.0% | |
| CCTGTTGATCATCCTCATGG+TGG | + | chr2.2:67918568-67918587 | MS.gene01518:CDS | 50.0% | |
| CCTTGGGGTAAGCCAACTAA+GGG | + | chr2.2:67918643-67918662 | MS.gene01518:CDS | 50.0% | |
| CGGTGATCGCAAGCTTAAGA+AGG | + | chr2.2:67918489-67918508 | MS.gene01518:CDS | 50.0% | |
| GACCCAAATGGTCCTATGTC+TGG | - | chr2.2:67918005-67918024 | None:intergenic | 50.0% | |
| GATCGCAAGCTTAAGAAGGC+TGG | + | chr2.2:67918493-67918512 | MS.gene01518:CDS | 50.0% | |
| GCAAGAGCAAGAGTAGTGGT+GGG | + | chr2.2:67918599-67918618 | MS.gene01518:CDS | 50.0% | |
| GTTGATCATCCTCATGGTGG+AGG | + | chr2.2:67918571-67918590 | MS.gene01518:CDS | 50.0% | |
| TCAATCGGAGACCGGTTGTT+CGG | + | chr2.2:67918530-67918549 | MS.gene01518:CDS | 50.0% | |
| TCCTTGGGGTAAGCCAACTA+AGG | + | chr2.2:67918642-67918661 | MS.gene01518:CDS | 50.0% | |
| ! | AGAAGGCTGGTCATAGCAGA+TGG | + | chr2.2:67918506-67918525 | MS.gene01518:CDS | 50.0% |
| ! | AGAGAAACGGCGAAGAGCAT+TGG | - | chr2.2:67917812-67917831 | None:intergenic | 50.0% |
| ! | GCAAGGTGGAAAGCTTGTTC+GGG | + | chr2.2:67918333-67918352 | MS.gene01518:CDS | 50.0% |
| ! | GGCAAGGTGGAAAGCTTGTT+CGG | + | chr2.2:67918332-67918351 | MS.gene01518:CDS | 50.0% |
| AAAGGTTCCCGCACTCCTTG+GGG | + | chr2.2:67918628-67918647 | MS.gene01518:CDS | 55.0% | |
| AATCGGAGACCGGTTGTTCG+GGG | + | chr2.2:67918532-67918551 | MS.gene01518:CDS | 55.0% | |
| ACAAGCTTTCCACCTTGCCC+TGG | - | chr2.2:67918331-67918350 | None:intergenic | 55.0% | |
| AGCTTGCGATCACCGTGAGT+TGG | - | chr2.2:67918484-67918503 | None:intergenic | 55.0% | |
| ATAGCCACACCCCGAACAAC+CGG | - | chr2.2:67918544-67918563 | None:intergenic | 55.0% | |
| ATTGAGCTGAACCCAGGGCA+AGG | + | chr2.2:67918316-67918335 | MS.gene01518:CDS | 55.0% | |
| CAAGCTTTCCACCTTGCCCT+GGG | - | chr2.2:67918330-67918349 | None:intergenic | 55.0% | |
| CAATCGGAGACCGGTTGTTC+GGG | + | chr2.2:67918531-67918550 | MS.gene01518:CDS | 55.0% | |
| CAGATGGCTCAATCGGAGAC+CGG | + | chr2.2:67918522-67918541 | MS.gene01518:CDS | 55.0% | |
| GAAAGGTTCCCGCACTCCTT+GGG | + | chr2.2:67918627-67918646 | MS.gene01518:CDS | 55.0% | |
| GAGGGCAAGAGCAAGAGTAG+TGG | + | chr2.2:67918595-67918614 | MS.gene01518:CDS | 55.0% | |
| GCTCTTCGCCGTTTCTCTAC+TGG | + | chr2.2:67917814-67917833 | MS.gene01518:CDS | 55.0% | |
| GGCAAGAGCAAGAGTAGTGG+TGG | + | chr2.2:67918598-67918617 | MS.gene01518:CDS | 55.0% | |
| TGGGGTAAGCCAACTAAGGG+TGG | + | chr2.2:67918646-67918665 | MS.gene01518:CDS | 55.0% | |
| TTGGCTTACCCCAAGGAGTG+CGG | - | chr2.2:67918639-67918658 | None:intergenic | 55.0% | |
| ! | AGAGCAAGAGTAGTGGTGGG+TGG | + | chr2.2:67918602-67918621 | MS.gene01518:CDS | 55.0% |
| ! | CATCCTCATGGTGGAGGAGA+GGG | + | chr2.2:67918577-67918596 | MS.gene01518:CDS | 55.0% |
| ! | CCCTTAGTTGGCTTACCCCA+AGG | - | chr2.2:67918646-67918665 | None:intergenic | 55.0% |
| ! | TCATCCTCATGGTGGAGGAG+AGG | + | chr2.2:67918576-67918595 | MS.gene01518:CDS | 55.0% |
| !! | AGCAAGAGTAGTGGTGGGTG+GGG | + | chr2.2:67918604-67918623 | MS.gene01518:CDS | 55.0% |
| !! | GAGCAAGAGTAGTGGTGGGT+GGG | + | chr2.2:67918603-67918622 | MS.gene01518:CDS | 55.0% |
| ACTCGATGCAGGGCCACTGT+CGG | + | chr2.2:67918445-67918464 | MS.gene01518:CDS | 60.0% | |
| GGAAAGGTTCCCGCACTCCT+TGG | + | chr2.2:67918626-67918645 | MS.gene01518:CDS | 60.0% | |
| TTGCCCTCTCCTCCACCATG+AGG | - | chr2.2:67918583-67918602 | None:intergenic | 60.0% | |
| ! | GGAAAGCTTGTTCGGGCAGC+TGG | + | chr2.2:67918340-67918359 | MS.gene01518:CDS | 60.0% |
| ! | TGGCTTACCCCAAGGAGTGC+GGG | - | chr2.2:67918638-67918657 | None:intergenic | 60.0% |
| !! | AGTAGTGGTGGGTGGGGGAA+AGG | + | chr2.2:67918610-67918629 | MS.gene01518:CDS | 60.0% |
| !! | GCAAGAGTAGTGGTGGGTGG+GGG | + | chr2.2:67918605-67918624 | MS.gene01518:CDS | 60.0% |
| ATCCTCTCGCGTGCCTCCTG+AGG | - | chr2.2:67918217-67918236 | None:intergenic | 65.0% | |
| GAGACCGGTTGTTCGGGGTG+TGG | + | chr2.2:67918537-67918556 | MS.gene01518:CDS | 65.0% | |
| GAGCTGAACCCAGGGCAAGG+TGG | + | chr2.2:67918319-67918338 | MS.gene01518:CDS | 65.0% | |
| ! | TTCCTCAGGAGGCACGCGAG+AGG | + | chr2.2:67918212-67918231 | MS.gene01518:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 67917754 | 67918702 | 67917754 | ID=MS.gene01518 |
| chr2.2 | mRNA | 67917754 | 67918702 | 67917754 | ID=MS.gene01518.t1;Parent=MS.gene01518 |
| chr2.2 | exon | 67917754 | 67917835 | 67917754 | ID=MS.gene01518.t1.exon1;Parent=MS.gene01518.t1 |
| chr2.2 | CDS | 67917754 | 67917835 | 67917754 | ID=cds.MS.gene01518.t1;Parent=MS.gene01518.t1 |
| chr2.2 | exon | 67918194 | 67918702 | 67918194 | ID=MS.gene01518.t1.exon2;Parent=MS.gene01518.t1 |
| chr2.2 | CDS | 67918194 | 67918702 | 67918194 | ID=cds.MS.gene01518.t1;Parent=MS.gene01518.t1 |
| Gene Sequence |
| Protein sequence |