AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016847

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016847.t1 MTR_5g087620 96.142 337 13 0 2 338 5 341 0.0 687
MS.gene016847.t1 MTR_5g087620 94.030 67 4 0 339 405 430 496 4.42e-32 127
MS.gene016847.t1 MTR_2g098430 44.543 339 171 4 1 338 1 323 5.98e-92 285
MS.gene016847.t1 MTR_8g066610 30.061 326 213 6 7 328 9 323 9.93e-40 148
MS.gene016847.t1 MTR_7g102560 31.250 336 192 10 7 328 9 319 9.45e-39 145
MS.gene016847.t1 MTR_7g117405 32.184 348 214 8 6 350 11 339 1.09e-38 145
MS.gene016847.t1 MTR_5g045960 29.179 329 213 9 4 327 6 319 1.54e-37 142
MS.gene016847.t1 MTR_7g055710 28.308 325 216 6 7 328 11 321 4.81e-36 138
MS.gene016847.t1 MTR_5g045970 30.091 329 212 9 7 331 16 330 1.51e-35 137
MS.gene016847.t1 MTR_4g485630 29.878 328 201 9 7 328 9 313 4.41e-35 135
MS.gene016847.t1 MTR_7g102460 30.060 336 213 9 1 328 1 322 1.46e-34 134
MS.gene016847.t1 MTR_1g062380 29.179 329 216 9 7 331 16 331 5.61e-34 132
MS.gene016847.t1 MTR_4g485620 28.367 349 219 10 19 363 1 322 6.42e-34 132
MS.gene016847.t1 MTR_4g485590 30.124 322 188 8 7 328 9 293 1.06e-33 130
MS.gene016847.t1 MTR_7g102550 30.183 328 206 9 7 327 9 320 2.45e-33 130
MS.gene016847.t1 MTR_0536s0020 29.787 329 195 10 3 327 14 310 2.23e-32 127
MS.gene016847.t1 MTR_7g070740 28.182 330 220 6 2 328 6 321 7.60e-32 126
MS.gene016847.t1 MTR_4g024020 29.003 331 215 9 5 328 7 324 4.35e-31 124
MS.gene016847.t1 MTR_4g108250 26.748 329 220 7 7 328 11 325 1.67e-30 122
MS.gene016847.t1 MTR_7g102490 27.027 333 219 8 5 328 7 324 3.33e-30 122
MS.gene016847.t1 MTR_4g117980 29.231 325 194 11 12 327 16 313 6.45e-30 120
MS.gene016847.t1 MTR_7g070780 28.000 325 217 7 7 328 11 321 1.84e-29 119
MS.gene016847.t1 MTR_2g059240 32.416 327 203 8 6 328 12 324 1.89e-29 119
MS.gene016847.t1 MTR_7g102450 28.615 325 202 7 6 328 10 306 3.96e-29 118
MS.gene016847.t1 MTR_7g070610 27.077 325 220 6 7 328 13 323 7.69e-29 118
MS.gene016847.t1 MTR_2g034990 29.762 336 196 11 3 327 7 313 8.40e-29 117
MS.gene016847.t1 MTR_7g070870 29.032 341 205 11 1 332 10 322 1.19e-28 117
MS.gene016847.t1 MTR_0009s0240 30.149 335 202 12 1 330 1 308 1.46e-28 117
MS.gene016847.t1 MTR_7g070660 26.462 325 217 7 7 328 11 316 4.82e-28 115
MS.gene016847.t1 MTR_5g039900 27.469 324 218 6 8 328 14 323 5.69e-28 115
MS.gene016847.t1 MTR_4g117890 28.267 329 200 10 3 327 9 305 8.07e-28 115
MS.gene016847.t1 MTR_7g070800 27.964 329 217 8 3 328 2 313 1.33e-27 114
MS.gene016847.t1 MTR_7g070910 27.300 337 215 9 2 328 6 322 2.39e-27 114
MS.gene016847.t1 MTR_0036s0220 26.239 343 214 12 6 329 11 333 2.49e-27 113
MS.gene016847.t1 MTR_7g071040 25.982 331 227 7 2 328 12 328 3.08e-27 113
MS.gene016847.t1 MTR_7g070810 27.273 330 213 8 7 332 9 315 3.19e-27 113
MS.gene016847.t1 MTR_6g035295 28.701 331 206 10 8 328 13 323 3.88e-27 113
MS.gene016847.t1 MTR_5g464760 28.571 350 205 13 3 329 8 335 5.29e-27 112
MS.gene016847.t1 MTR_5g016660 27.500 360 232 10 9 363 12 347 5.53e-27 112
MS.gene016847.t1 MTR_4g031800 27.729 339 212 8 3 334 4 316 1.58e-26 111
MS.gene016847.t1 MTR_6g035265 28.660 321 192 10 12 327 16 304 1.88e-26 110
MS.gene016847.t1 MTR_6g038220 28.955 335 202 11 2 328 3 309 1.89e-26 110
MS.gene016847.t1 MTR_3g479520 26.989 352 207 11 3 329 11 337 2.84e-26 110
MS.gene016847.t1 MTR_2g008210 28.696 345 204 12 4 329 8 329 3.29e-26 110
MS.gene016847.t1 MTR_7g070940 26.901 342 210 10 4 335 6 317 4.91e-26 109
MS.gene016847.t1 MTR_5g035580 27.711 332 194 12 7 328 13 308 1.19e-25 108
MS.gene016847.t1 MTR_4g117950 27.964 329 200 12 3 327 2 297 1.65e-25 108
MS.gene016847.t1 MTR_7g070860 27.492 331 220 9 1 328 1 314 2.54e-25 107
MS.gene016847.t1 MTR_0536s0010 27.660 329 200 11 3 327 17 311 3.02e-25 107
MS.gene016847.t1 MTR_4g117960 27.864 323 199 9 12 327 16 311 3.82e-25 107
MS.gene016847.t1 MTR_7g070930 26.380 326 222 8 7 328 14 325 5.35e-25 107
MS.gene016847.t1 MTR_5g464810 27.616 344 206 13 7 329 12 333 6.75e-25 106
MS.gene016847.t1 MTR_5g064240 27.616 344 206 13 7 329 12 333 6.75e-25 106
MS.gene016847.t1 MTR_6g014186 24.859 354 219 11 1 329 1 332 8.08e-25 105
MS.gene016847.t1 MTR_5g035560 27.108 332 196 11 7 328 11 306 9.61e-25 106
MS.gene016847.t1 MTR_7g102520 26.567 335 220 11 7 332 12 329 1.25e-24 105
MS.gene016847.t1 MTR_4g118000 27.187 320 194 10 12 327 17 301 3.36e-24 104
MS.gene016847.t1 MTR_4g094220 26.455 378 229 15 1 354 1 353 3.93e-24 104
MS.gene016847.t1 MTR_2g035020 28.060 335 205 10 2 327 6 313 4.26e-24 104
MS.gene016847.t1 MTR_5g040030 26.911 327 225 8 4 328 11 325 5.87e-24 103
MS.gene016847.t1 MTR_3g079480 25.872 344 219 10 4 329 18 343 8.91e-24 103
MS.gene016847.t1 MTR_8g044140 29.252 294 192 6 38 328 6 286 1.10e-23 102
MS.gene016847.t1 MTR_5g027210 24.713 348 204 8 8 328 5 321 1.66e-23 102
MS.gene016847.t1 MTR_6g038200 27.217 327 206 11 7 328 11 310 3.82e-23 101
MS.gene016847.t1 MTR_6g038240 26.705 352 207 14 6 341 10 326 6.02e-23 100
MS.gene016847.t1 MTR_8g071070 27.957 372 217 14 1 349 1 344 1.39e-22 99.8
MS.gene016847.t1 MTR_6g014270 25.352 355 218 13 1 329 1 334 2.17e-22 99.4
MS.gene016847.t1 MTR_7g012120 27.628 333 206 11 2 327 11 315 4.35e-22 98.2
MS.gene016847.t1 MTR_6g035185 28.354 328 193 11 12 327 16 313 5.44e-22 98.2
MS.gene016847.t1 MTR_4g485640 28.438 320 184 9 17 327 219 502 8.10e-22 98.2
MS.gene016847.t1 MTR_8g009055 29.480 346 184 14 3 330 2 305 9.83e-22 97.1
MS.gene016847.t1 MTR_3g479470 27.326 344 214 13 4 329 10 335 2.08e-21 96.3
MS.gene016847.t1 MTR_6g014040 25.000 348 225 13 2 329 5 336 2.26e-21 96.3
MS.gene016847.t1 MTR_8g068360 28.319 339 199 12 3 328 8 315 2.54e-21 95.9
MS.gene016847.t1 MTR_3g479490 26.286 350 212 14 3 329 2 328 6.01e-21 94.7
MS.gene016847.t1 MTR_6g013440 25.072 347 221 13 4 329 8 336 6.60e-21 94.7
MS.gene016847.t1 MTR_6g014150 25.356 351 221 14 1 329 1 332 9.48e-21 94.4
MS.gene016847.t1 MTR_5g066410 27.914 326 197 10 10 330 1 293 1.27e-20 93.6
MS.gene016847.t1 MTR_8g466240 25.836 329 206 9 7 328 8 305 2.55e-20 92.8
MS.gene016847.t1 MTR_6g014290 24.646 353 219 15 1 329 4 333 2.64e-20 93.2
MS.gene016847.t1 MTR_6g014187 25.215 349 220 15 3 329 6 335 2.82e-20 92.8
MS.gene016847.t1 MTR_6g038230 26.471 340 210 13 7 334 11 322 3.33e-20 92.4
MS.gene016847.t1 MTR_6g014020 24.857 350 224 14 1 329 4 335 3.75e-20 92.4
MS.gene016847.t1 MTR_5g067170 26.769 325 200 10 12 327 16 311 6.37e-20 92.0
MS.gene016847.t1 MTR_8g007565 28.190 337 211 13 1 328 1 315 6.38e-20 91.7
MS.gene016847.t1 MTR_6g014200 25.143 350 223 14 1 329 1 332 7.22e-20 91.7
MS.gene016847.t1 MTR_1g040310 26.935 323 217 8 9 328 17 323 7.50e-20 91.7
MS.gene016847.t1 MTR_8g008990 28.443 334 203 11 3 330 2 305 1.44e-19 90.9
MS.gene016847.t1 MTR_4g008630 28.182 330 201 10 8 335 15 310 1.80e-19 90.5
MS.gene016847.t1 MTR_8g068330 29.204 339 205 11 3 332 4 316 2.58e-19 90.1
MS.gene016847.t1 MTR_8g032950 25.301 332 215 9 2 327 7 311 2.79e-19 90.1
MS.gene016847.t1 MTR_3g008010 24.138 348 227 14 1 329 4 333 3.06e-19 89.7
MS.gene016847.t1 MTR_6g014250 25.770 357 210 18 1 329 4 333 3.57e-19 89.7
MS.gene016847.t1 MTR_8g059425 23.796 353 222 14 1 329 4 333 3.88e-19 89.4
MS.gene016847.t1 MTR_8g007650 27.893 337 212 13 1 328 1 315 4.70e-19 89.4
MS.gene016847.t1 MTR_1g029540 26.364 330 196 11 12 335 19 307 5.23e-19 89.0
MS.gene016847.t1 MTR_7g013180 26.786 336 206 12 6 332 4 308 6.98e-19 88.6
MS.gene016847.t1 MTR_5g029800 26.667 330 200 11 8 327 12 309 7.26e-19 88.6
MS.gene016847.t1 MTR_8g068340 27.941 340 200 12 3 328 8 316 9.56e-19 88.2
MS.gene016847.t1 MTR_6g038300 25.212 353 218 13 6 346 10 328 1.39e-18 87.8
MS.gene016847.t1 MTR_7g011470 26.393 341 216 13 1 329 4 321 1.61e-18 87.4
MS.gene016847.t1 MTR_7g080950 24.561 342 204 8 3 329 2 304 1.92e-18 87.4
MS.gene016847.t1 MTR_7g011470 27.059 340 211 15 1 329 4 317 2.07e-18 87.4
MS.gene016847.t1 MTR_6g014050 25.714 350 222 15 1 329 4 336 2.15e-18 87.4
MS.gene016847.t1 MTR_6g013450 25.562 356 215 16 1 329 4 336 2.65e-18 87.0
MS.gene016847.t1 MTR_6g014220 25.501 349 221 14 1 329 4 333 3.59e-18 86.7
MS.gene016847.t1 MTR_6g011340 26.087 345 226 12 1 329 4 335 4.21e-18 86.3
MS.gene016847.t1 MTR_7g067120 24.308 325 203 7 4 328 6 287 5.16e-18 85.9
MS.gene016847.t1 MTR_0288s0020 23.580 352 207 12 1 329 4 316 6.50e-18 85.9
MS.gene016847.t1 MTR_8g074550 25.121 414 225 15 4 392 5 358 7.19e-18 85.9
MS.gene016847.t1 MTR_3g009510 23.410 393 248 13 8 380 6 365 8.06e-18 85.5
MS.gene016847.t1 MTR_7g080935 24.699 332 210 12 5 328 9 308 1.06e-17 85.1
MS.gene016847.t1 MTR_2g046620 25.455 330 207 12 7 328 16 314 1.19e-17 85.1
MS.gene016847.t1 MTR_1g107380 26.761 355 216 15 3 341 7 333 1.24e-17 85.1
MS.gene016847.t1 MTR_3g031400 22.754 334 200 11 7 328 18 305 3.23e-17 83.6
MS.gene016847.t1 MTR_8g090095 24.523 367 240 11 12 375 30 362 3.29e-17 83.6
MS.gene016847.t1 MTR_7g067330 24.923 325 201 7 4 328 6 287 3.34e-17 83.6
MS.gene016847.t1 MTR_3g031450 22.985 335 200 12 7 328 18 307 3.50e-17 83.6
MS.gene016847.t1 MTR_6g042310 24.773 331 214 12 4 328 15 316 3.86e-17 83.6
MS.gene016847.t1 MTR_6g013960 25.143 350 221 17 1 328 4 334 4.91e-17 83.2
MS.gene016847.t1 MTR_5g072830 26.205 332 192 11 7 326 10 300 6.22e-17 82.8
MS.gene016847.t1 MTR_5g090620 23.977 342 211 13 4 330 2 309 6.59e-17 82.8
MS.gene016847.t1 MTR_5g090700 23.580 352 202 14 4 330 2 311 8.12e-17 82.4
MS.gene016847.t1 MTR_6g014310 24.709 344 224 12 5 329 9 336 2.48e-16 80.9
MS.gene016847.t1 MTR_6g013900 25.071 351 221 16 1 329 4 334 2.80e-16 80.9
MS.gene016847.t1 MTR_8g009050 26.923 338 203 12 3 330 2 305 3.29e-16 80.5
MS.gene016847.t1 MTR_3g069710 25.305 328 204 10 8 329 13 305 3.92e-16 80.5
MS.gene016847.t1 MTR_6g033675 27.746 346 192 18 5 328 2 311 4.17e-16 80.5
MS.gene016847.t1 MTR_5g072820 24.850 334 194 10 7 326 10 300 4.30e-16 80.1
MS.gene016847.t1 MTR_7g080900 24.179 335 217 11 1 328 6 310 4.72e-16 80.1
MS.gene016847.t1 MTR_2g035040 32.057 209 120 7 127 327 24 218 6.90e-16 79.3
MS.gene016847.t1 MTR_4g064987 26.870 361 199 15 5 350 6 316 7.72e-16 79.3
MS.gene016847.t1 MTR_8g006710 27.515 338 199 11 4 330 3 305 7.96e-16 79.3
MS.gene016847.t1 MTR_5g072810 24.024 333 205 8 7 328 12 307 7.98e-16 79.3
MS.gene016847.t1 MTR_7g080940 24.024 333 211 10 5 328 9 308 8.49e-16 79.3
MS.gene016847.t1 MTR_3g479620 29.448 163 100 4 3 163 2 151 8.82e-16 75.1
MS.gene016847.t1 MTR_6g033625 25.862 348 196 11 5 328 2 311 1.22e-15 79.0
MS.gene016847.t1 MTR_2g008220 24.471 331 224 8 2 328 9 317 2.12e-15 78.2
MS.gene016847.t1 MTR_3g084530 25.656 343 202 13 7 328 6 316 2.16e-15 78.2
MS.gene016847.t1 MTR_6g023665 25.148 338 208 12 3 330 9 311 2.74e-15 77.8
MS.gene016847.t1 MTR_5g031830 28.000 350 194 17 6 329 11 328 2.86e-15 77.8
MS.gene016847.t1 MTR_5g031860 28.198 344 200 14 6 329 11 327 3.15e-15 77.4
MS.gene016847.t1 MTR_7g470610 29.231 195 115 3 136 328 5 178 3.38e-15 75.9
MS.gene016847.t1 MTR_7g070583 29.231 195 115 3 136 328 5 178 3.38e-15 75.9
MS.gene016847.t1 MTR_6g013990 24.650 357 210 13 3 329 6 333 3.53e-15 77.4
MS.gene016847.t1 MTR_4g064987 26.776 366 199 15 5 350 6 322 4.97e-15 77.0
MS.gene016847.t1 MTR_0184s0040 26.344 372 226 13 4 364 18 352 7.54e-15 76.6
MS.gene016847.t1 MTR_0078s0190 26.344 372 226 13 4 364 18 352 7.54e-15 76.6
MS.gene016847.t1 MTR_8g465670 25.882 340 206 12 1 330 1 304 9.17e-15 76.3
MS.gene016847.t1 MTR_5g019580 27.841 352 193 15 1 330 1 313 9.86e-15 76.3
MS.gene016847.t1 MTR_6g033615 27.164 335 194 9 5 328 2 297 1.30e-14 75.5
MS.gene016847.t1 MTR_6g488280 24.927 341 205 13 3 330 2 304 1.36e-14 75.5
MS.gene016847.t1 MTR_0428s0010 24.927 341 205 13 3 330 2 304 1.36e-14 75.5
MS.gene016847.t1 MTR_8g083290 26.608 342 202 17 6 328 2 313 2.20e-14 75.1
MS.gene016847.t1 MTR_8g006730 26.531 343 210 12 4 337 3 312 2.21e-14 75.1
MS.gene016847.t1 MTR_6g013920 25.356 351 220 17 1 329 4 334 2.61e-14 74.7
MS.gene016847.t1 MTR_8g006270 25.862 348 191 12 3 330 2 302 2.71e-14 74.7
MS.gene016847.t1 MTR_6g013680 23.009 339 205 12 109 403 49 375 2.79e-14 74.3
MS.gene016847.t1 MTR_5g072860 24.036 337 208 11 7 328 18 321 2.99e-14 74.7
MS.gene016847.t1 MTR_1g090270 24.107 336 202 11 7 330 15 309 3.42e-14 74.3
MS.gene016847.t1 MTR_1g107350 23.193 332 235 8 2 330 3 317 4.18e-14 74.3
MS.gene016847.t1 MTR_8g009067 26.176 340 203 10 3 330 2 305 4.71e-14 73.9
MS.gene016847.t1 MTR_6g033725 24.855 346 199 15 5 328 2 308 5.47e-14 73.9
MS.gene016847.t1 MTR_8g027870 25.373 335 206 12 3 330 14 311 5.98e-14 73.6
MS.gene016847.t1 MTR_0078s0010 25.373 335 211 9 4 330 3 306 7.30e-14 73.6
MS.gene016847.t1 MTR_8g009063 26.254 339 200 13 3 328 9 310 7.75e-14 73.2
MS.gene016847.t1 MTR_8g009073 26.496 351 188 15 3 330 2 305 9.90e-14 72.8
MS.gene016847.t1 MTR_1g032490 23.653 334 221 11 7 330 10 319 1.24e-13 72.8
MS.gene016847.t1 MTR_1g019510 25.740 338 205 12 3 330 2 303 1.55e-13 72.4
MS.gene016847.t1 MTR_7g013240 26.284 331 199 15 6 329 5 297 1.80e-13 72.0
MS.gene016847.t1 MTR_7g046490 25.872 344 200 10 3 332 2 304 2.08e-13 72.0
MS.gene016847.t1 MTR_5g031840 25.843 356 192 16 6 329 4 319 2.53e-13 71.6
MS.gene016847.t1 MTR_8g088560 24.047 341 234 9 7 345 10 327 2.80e-13 71.6
MS.gene016847.t1 MTR_0078s0060 25.373 335 210 10 4 330 3 305 2.90e-13 71.6
MS.gene016847.t1 MTR_5g019580 25.369 339 190 12 1 330 53 337 3.22e-13 71.6
MS.gene016847.t1 MTR_6g033660 25.373 335 207 10 8 328 5 310 3.89e-13 71.2
MS.gene016847.t1 MTR_5g090580 22.714 339 219 10 4 330 2 309 4.00e-13 71.2
MS.gene016847.t1 MTR_6g036650 23.582 335 222 10 3 328 14 323 4.09e-13 71.2
MS.gene016847.t1 MTR_6g013435 24.427 262 144 9 181 403 61 307 4.24e-13 70.1
MS.gene016847.t1 MTR_7g117170 26.136 352 192 16 1 330 9 314 8.00e-13 70.1
MS.gene016847.t1 MTR_2g008226 25.507 345 211 15 3 328 5 322 8.29e-13 70.1
MS.gene016847.t1 MTR_8g027885 24.702 336 207 11 3 330 14 311 8.37e-13 70.1
MS.gene016847.t1 MTR_8g006220 25.740 338 205 12 3 330 2 303 9.80e-13 70.1
MS.gene016847.t1 MTR_8g008970 26.023 342 201 10 3 330 2 305 1.14e-12 70.1
MS.gene016847.t1 MTR_4g079270 25.479 365 221 12 7 363 8 329 1.62e-12 69.3
MS.gene016847.t1 MTR_5g090670 22.289 332 231 8 4 330 2 311 1.67e-12 69.3
MS.gene016847.t1 MTR_4g123553 23.476 328 216 10 7 328 15 313 1.69e-12 69.3
MS.gene016847.t1 MTR_5g058320 23.699 346 218 14 1 329 4 320 2.21e-12 68.9
MS.gene016847.t1 MTR_4g117970 27.313 227 132 9 82 296 48 253 6.09e-12 67.4
MS.gene016847.t1 MTR_5g090660 23.894 339 213 14 4 330 2 307 6.27e-12 67.8
MS.gene016847.t1 MTR_8g009067 37.273 110 57 2 223 330 88 187 9.38e-12 66.2
MS.gene016847.t1 MTR_5g016480 26.426 333 199 17 15 329 16 320 1.09e-11 66.6
MS.gene016847.t1 MTR_4g079250 26.608 342 210 12 1 333 1 310 2.32e-11 65.5
MS.gene016847.t1 MTR_2g046750 25.836 329 208 15 9 330 9 308 2.43e-11 65.5
MS.gene016847.t1 MTR_8g012745 26.316 285 156 11 69 330 55 308 3.36e-11 65.1
MS.gene016847.t1 MTR_3g084520 23.919 347 203 10 7 328 6 316 3.75e-11 65.1
MS.gene016847.t1 MTR_8g009073 33.835 133 76 4 200 330 54 176 4.25e-11 64.3
MS.gene016847.t1 MTR_2g098425 33.088 136 74 5 9 135 14 141 5.11e-11 62.4
MS.gene016847.t1 MTR_3g069690 21.791 335 216 10 4 329 5 302 6.92e-11 64.3
MS.gene016847.t1 MTR_0536s0030 25.500 200 122 6 38 236 9 182 6.95e-11 63.5
MS.gene016847.t1 MTR_5g070040 23.837 344 212 15 3 330 7 316 8.67e-11 63.9
MS.gene016847.t1 MTR_4g128720 23.964 338 208 11 4 328 12 313 9.74e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016847.t1 AT5G12890 40.346 347 181 5 1 338 1 330 8.22e-82 259
MS.gene016847.t1 AT2G36780 32.209 326 203 7 7 328 14 325 1.40e-46 167
MS.gene016847.t1 AT2G36770 30.982 326 207 7 7 328 14 325 6.56e-45 162
MS.gene016847.t1 AT2G36750 34.251 327 194 8 7 328 10 320 1.04e-44 162
MS.gene016847.t1 AT2G36800 32.551 341 206 9 7 341 12 334 2.65e-43 158
MS.gene016847.t1 AT4G34135 30.612 343 214 7 4 337 8 335 2.66e-42 152
MS.gene016847.t1 AT1G73880 31.437 334 195 13 5 330 12 319 2.27e-40 149
MS.gene016847.t1 AT4G34135 30.838 334 207 7 4 328 8 326 2.35e-40 150
MS.gene016847.t1 AT2G36760 31.003 329 203 12 7 328 14 325 4.93e-39 146
MS.gene016847.t1 AT2G15490 30.060 336 211 8 1 327 1 321 1.74e-38 144
MS.gene016847.t1 AT2G15480 31.118 331 204 8 7 328 10 325 1.87e-38 145
MS.gene016847.t1 AT2G15490 30.060 336 211 8 1 327 1 321 1.99e-38 144
MS.gene016847.t1 AT2G15480 31.118 331 204 8 7 328 10 325 2.91e-38 144
MS.gene016847.t1 AT2G36790 31.965 341 207 9 7 341 13 334 2.10e-37 142
MS.gene016847.t1 AT3G53160 30.462 325 210 9 7 328 8 319 1.20e-36 140
MS.gene016847.t1 AT4G34131 30.000 340 214 7 4 334 7 331 1.71e-36 139
MS.gene016847.t1 AT3G53150 29.003 331 215 9 4 328 19 335 5.19e-35 135
MS.gene016847.t1 AT4G34138 28.863 343 197 11 5 327 9 324 3.50e-33 130
MS.gene016847.t1 AT2G16890 29.217 332 202 8 7 328 9 317 3.76e-30 120
MS.gene016847.t1 AT2G16890 29.429 333 200 9 7 328 9 317 4.94e-30 121
MS.gene016847.t1 AT1G10400 26.706 337 218 7 1 328 1 317 2.86e-29 119
MS.gene016847.t1 AT1G22380 26.923 364 223 15 3 347 9 348 5.54e-29 118
MS.gene016847.t1 AT1G22400 27.089 347 212 11 4 329 10 336 2.90e-28 116
MS.gene016847.t1 AT2G16890 28.485 330 191 9 7 320 9 309 1.05e-27 112
MS.gene016847.t1 AT2G16890 28.485 330 191 9 7 320 9 309 1.05e-27 112
MS.gene016847.t1 AT1G22370 27.381 336 219 11 4 329 10 330 2.21e-27 113
MS.gene016847.t1 AT1G22360 27.246 345 213 13 4 329 7 332 7.79e-27 112
MS.gene016847.t1 AT1G22360 27.246 345 213 13 4 329 7 332 8.63e-27 112
MS.gene016847.t1 AT5G14860 26.957 345 201 11 7 328 8 324 1.81e-25 108
MS.gene016847.t1 AT1G22340 25.581 344 220 11 4 329 10 335 4.04e-25 107
MS.gene016847.t1 AT1G51210 27.679 336 208 12 5 334 18 324 9.63e-25 105
MS.gene016847.t1 AT5G03490 27.300 337 215 10 4 334 16 328 2.97e-24 104
MS.gene016847.t1 AT2G36970 26.667 345 206 12 4 329 7 323 2.15e-23 102
MS.gene016847.t1 AT5G65550 27.954 347 198 14 1 328 1 314 2.56e-23 102
MS.gene016847.t1 AT5G49690 27.893 337 193 13 7 328 10 311 8.80e-23 100
MS.gene016847.t1 AT1G05680 25.301 332 208 12 7 328 6 307 1.39e-21 96.7
MS.gene016847.t1 AT1G06000 29.217 332 168 14 4 328 7 278 1.85e-20 93.2
MS.gene016847.t1 AT2G15490 30.151 199 121 6 1 190 1 190 1.18e-19 88.6
MS.gene016847.t1 AT3G46680 26.741 359 218 15 3 354 5 325 2.91e-19 89.7
MS.gene016847.t1 AT1G05675 24.159 327 218 10 7 328 6 307 3.06e-19 89.7
MS.gene016847.t1 AT3G46690 25.414 362 217 11 4 354 6 325 1.61e-18 87.4
MS.gene016847.t1 AT2G28080 24.085 328 215 11 12 329 23 326 3.01e-18 87.0
MS.gene016847.t1 AT3G46670 25.429 350 189 13 3 329 2 302 1.16e-17 85.1
MS.gene016847.t1 AT5G66690 25.779 353 204 15 5 342 5 314 1.87e-17 84.3
MS.gene016847.t1 AT2G31750 26.706 337 208 15 1 328 1 307 3.06e-17 83.6
MS.gene016847.t1 AT2G31750 26.706 337 208 15 1 328 1 307 5.95e-17 82.8
MS.gene016847.t1 AT1G01390 26.437 348 197 13 1 330 18 324 8.80e-17 82.4
MS.gene016847.t1 AT1G01390 26.437 348 197 13 1 330 1 307 9.01e-17 82.4
MS.gene016847.t1 AT4G01070 26.273 373 183 14 4 339 5 322 1.30e-16 80.9
MS.gene016847.t1 AT4G01070 26.273 373 183 14 4 339 5 322 1.63e-16 81.6
MS.gene016847.t1 AT2G22590 25.225 333 213 12 5 328 13 318 2.00e-16 81.3
MS.gene016847.t1 AT5G59580 24.779 339 197 12 5 329 7 301 2.08e-16 81.3
MS.gene016847.t1 AT3G46700 24.719 356 219 11 4 353 6 318 2.11e-16 81.3
MS.gene016847.t1 AT5G38040 23.494 332 192 11 15 329 18 304 2.51e-16 80.9
MS.gene016847.t1 AT1G78270 24.118 340 231 10 2 328 8 333 2.54e-16 80.9
MS.gene016847.t1 AT3G46660 24.638 345 200 11 3 329 7 309 2.57e-16 80.9
MS.gene016847.t1 AT2G31790 23.446 354 227 11 4 342 5 329 3.75e-16 80.5
MS.gene016847.t1 AT5G26310 25.588 340 197 13 5 330 5 302 5.82e-16 80.1
MS.gene016847.t1 AT5G38010 25.872 344 197 13 3 329 6 308 5.93e-16 79.7
MS.gene016847.t1 AT3G50740 26.554 354 189 16 1 330 1 307 5.57e-15 77.0
MS.gene016847.t1 AT1G05530 25.305 328 207 14 5 327 3 297 5.57e-15 76.6
MS.gene016847.t1 AT1G01420 24.561 342 204 12 6 332 10 312 5.62e-15 77.0
MS.gene016847.t1 AT1G01420 24.561 342 204 12 6 332 7 309 5.79e-15 77.0
MS.gene016847.t1 AT5G59590 24.633 341 198 14 4 329 7 303 5.87e-15 76.6
MS.gene016847.t1 AT2G30150 23.214 336 203 9 7 328 13 307 7.67e-15 76.3
MS.gene016847.t1 AT3G11340 25.455 385 204 18 3 367 5 326 8.68e-15 76.3
MS.gene016847.t1 AT3G55700 24.419 344 205 10 1 329 1 304 1.10e-14 75.9
MS.gene016847.t1 AT5G05860 24.074 378 226 14 1 360 1 335 1.19e-14 75.9
MS.gene016847.t1 AT3G46720 26.036 338 199 13 2 329 5 301 1.78e-14 75.1
MS.gene016847.t1 AT5G05880 25.749 334 196 15 7 328 8 301 2.77e-14 74.7
MS.gene016847.t1 AT5G54010 27.410 332 200 15 5 332 4 298 1.13e-13 72.8
MS.gene016847.t1 AT2G23260 25.882 340 193 15 7 329 10 307 1.75e-13 72.4
MS.gene016847.t1 AT2G29730 25.148 338 213 12 4 328 2 312 2.03e-13 72.0
MS.gene016847.t1 AT1G05560 24.308 325 209 11 6 327 4 294 2.72e-13 71.6
MS.gene016847.t1 AT2G43840 22.989 348 199 12 1 328 1 299 3.20e-13 71.2
MS.gene016847.t1 AT2G43840 23.143 350 196 13 1 328 1 299 3.47e-13 71.2
MS.gene016847.t1 AT2G30150 22.961 331 200 9 12 328 2 291 3.97e-13 71.2
MS.gene016847.t1 AT1G05560 24.308 325 209 11 6 327 54 344 3.98e-13 71.2
MS.gene016847.t1 AT5G37950 25.373 335 181 12 36 355 13 293 1.36e-12 68.9
MS.gene016847.t1 AT5G05900 24.118 340 200 14 7 328 8 307 1.50e-12 69.3
MS.gene016847.t1 AT5G05890 23.545 378 221 12 7 367 8 334 1.99e-12 68.9
MS.gene016847.t1 AT5G37950 25.225 333 190 12 36 355 13 299 2.87e-12 67.8
MS.gene016847.t1 AT4G36770 22.792 351 202 12 8 337 7 309 5.08e-12 67.8
MS.gene016847.t1 AT4G27570 22.781 338 215 10 1 332 1 298 6.64e-12 67.4
MS.gene016847.t1 AT1G22370 27.632 152 104 3 180 329 13 160 7.90e-12 66.2
MS.gene016847.t1 AT1G07250 24.432 352 204 18 4 328 3 319 1.69e-11 66.2
MS.gene016847.t1 AT3G21790 24.332 337 216 11 5 328 2 312 2.86e-11 65.5
MS.gene016847.t1 AT2G29710 25.074 339 211 14 4 328 2 311 8.12e-11 63.9

Find 80 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCCATCAACTACATTAA+AGG 0.165297 5.2:+74261667 MS.gene016847:CDS
CTTTGGCTTATATATCTATT+TGG 0.201361 5.2:+74261297 MS.gene016847:CDS
AAACAGATTCTGATGAGTTT+TGG 0.224968 5.2:+74261339 MS.gene016847:CDS
TTCACTACTTGTGGTGCTTA+TGG 0.229278 5.2:+74261272 MS.gene016847:CDS
TGTTGGATATTGCAGATTTA+AGG 0.267209 5.2:-74260968 None:intergenic
TGAACCTTATATTTGCAAAA+TGG 0.269186 5.2:-74262368 None:intergenic
TCTGTGCTTTACATTTCTTT+TGG 0.272218 5.2:+74261776 MS.gene016847:CDS
CCTTTCAATCATAGCCAATA+TGG 0.288520 5.2:+74261038 MS.gene016847:CDS
CAACTTCCTGTTTGGTGTGT+TGG 0.293531 5.2:+74261638 MS.gene016847:CDS
ACATCTGATATAATACAAAT+TGG 0.302473 5.2:-74261194 None:intergenic
TTCTCTGTGTTCTCTATGTT+TGG 0.322059 5.2:-74261068 None:intergenic
ACCAATGTTGCAAAGAGTTT+AGG 0.341329 5.2:+74261233 MS.gene016847:CDS
GAACCCTTTAATGTAGTTGA+TGG 0.345250 5.2:-74261671 None:intergenic
GTTGAGGAGATTGAGACATT+AGG 0.368040 5.2:+74261590 MS.gene016847:CDS
GATTGAGATATCATTGTTAG+AGG 0.368335 5.2:-74261000 None:intergenic
CTTCCATCAACTACATTAAA+GGG 0.370069 5.2:+74261668 MS.gene016847:CDS
TTGAGGAGATTGAGACATTA+GGG 0.385826 5.2:+74261591 MS.gene016847:CDS
ACTATCTTCAACTTCCTGTT+TGG 0.396628 5.2:+74261630 MS.gene016847:CDS
TGTTTGGTGGTAAACCATAT+TGG 0.402848 5.2:-74261052 None:intergenic
CATAGTGATGACACCATTCA+TGG 0.404967 5.2:+74260842 MS.gene016847:CDS
TTTGGTGTAATCTTCCTCAT+AGG 0.408997 5.2:+74261315 MS.gene016847:CDS
TGTGGAAAGTGTGATTTCTA+AGG 0.411976 5.2:+74262183 MS.gene016847:CDS
AATAGAGAAAGGTGAAGAAA+AGG 0.413934 5.2:+74262309 MS.gene016847:CDS
CAGCTGATGGAGCTGATAAC+TGG 0.415674 5.2:+74261504 MS.gene016847:CDS
TTTAAGGTGTTGAATGTTGA+GGG 0.423162 5.2:-74260952 None:intergenic
TGGGTTATTAGGCCACCTTT+TGG 0.429078 5.2:+74261875 MS.gene016847:CDS
AGAGGACCAACACACCAAAC+AGG 0.444461 5.2:-74261644 None:intergenic
AGGAAAGGGAAAAGAGATGA+AGG 0.466069 5.2:+74262246 MS.gene016847:CDS
AAGAGCTAAGAGGAGTTTCA+AGG 0.471920 5.2:-74261136 None:intergenic
ATCAAAGATCACACAACAAG+AGG 0.472717 5.2:+74261163 MS.gene016847:CDS
AATAAGTGCTTCACAAATGA+TGG 0.472776 5.2:+74261811 MS.gene016847:CDS
TTGTGGTGCTTATGGAACTT+TGG 0.474827 5.2:+74261280 MS.gene016847:CDS
TCTGTGTTCTCTATGTTTGG+TGG 0.481332 5.2:-74261065 None:intergenic
GCATTCTTCAAGAGCTATGC+CGG 0.481619 5.2:-74261723 None:intergenic
TCCTAAACTCTTTGCAACAT+TGG 0.482719 5.2:-74261234 None:intergenic
GAAGGTCATAGAAATAGTTA+TGG 0.494649 5.2:+74262216 MS.gene016847:CDS
ATAGAGAAAGGTGAAGAAAA+GGG 0.497514 5.2:+74262310 MS.gene016847:CDS
TATCGTGCCGGAAAAGAATC+CGG 0.505155 5.2:+74261704 MS.gene016847:CDS
TTTCTATGAAATCTGATGGA+TGG 0.506070 5.2:+74261555 MS.gene016847:CDS
GCACTTTCTATGAAATCTGA+TGG 0.507859 5.2:+74261551 MS.gene016847:CDS
CAAATGATGGCATTGGCTGA+AGG 0.509427 5.2:+74261824 MS.gene016847:CDS
TTTGATATTAAAGAGCTAAG+AGG 0.511656 5.2:-74261146 None:intergenic
CCATATTGGCTATGATTGAA+AGG 0.514637 5.2:-74261038 None:intergenic
TTGAATGTTGAGGGGAGTGG+TGG 0.516196 5.2:-74260943 None:intergenic
GATGGCATTGGCTGAAGGGT+TGG 0.527119 5.2:+74261829 MS.gene016847:CDS
GTGTTGAATGTTGAGGGGAG+TGG 0.528271 5.2:-74260946 None:intergenic
GCATTAATGTCAAAACCAAA+AGG 0.529138 5.2:-74261890 None:intergenic
TTTCTTGCTAGGGCTAGGAA+TGG 0.531751 5.2:-74260882 None:intergenic
AGTTATGGATCAAGAAGGAA+AGG 0.531800 5.2:+74262231 MS.gene016847:CDS
AGAGAGGCAACAATAGAGAA+AGG 0.537343 5.2:+74262298 MS.gene016847:CDS
TTCTAAGGAAGATGTGAAGA+AGG 0.540427 5.2:+74262198 MS.gene016847:CDS
GGGCTCTTCATTGAGAGCAA+TGG 0.546445 5.2:+74262330 MS.gene016847:CDS
AATATATCATTCACTACTTG+TGG 0.552017 5.2:+74261263 MS.gene016847:CDS
ATTTAAGGTGTTGAATGTTG+AGG 0.556478 5.2:-74260953 None:intergenic
GTTAGAGGAAGAAAATGTGT+TGG 0.559529 5.2:-74260985 None:intergenic
ATAGAAAGTGCTATCTGTGG+AGG 0.568920 5.2:-74261539 None:intergenic
CCTTTAATGTAGTTGATGGA+AGG 0.574557 5.2:-74261667 None:intergenic
AGATATCTAAGAGCAGCTGA+TGG 0.574582 5.2:+74261491 MS.gene016847:CDS
TCTGATATAATACAAATTGG+AGG 0.576021 5.2:-74261191 None:intergenic
CATAGCTCTTGAAGAATGCA+TGG 0.580876 5.2:+74261727 MS.gene016847:CDS
GAAATAGTTATGGATCAAGA+AGG 0.581158 5.2:+74262226 MS.gene016847:CDS
AAATGATGGCATTGGCTGAA+GGG 0.582808 5.2:+74261825 MS.gene016847:CDS
TCAAATTCAAAGTATCGTGC+CGG 0.583474 5.2:+74261692 MS.gene016847:CDS
TTAAGGTGTTGAATGTTGAG+GGG 0.591201 5.2:-74260951 None:intergenic
TGCTTCACAAATGATGGCAT+TGG 0.592228 5.2:+74261817 MS.gene016847:CDS
AGATGACCATGTGCCATGAA+TGG 0.594468 5.2:-74260855 None:intergenic
ATCTATGCATCTGAGAGATG+TGG 0.598533 5.2:-74261472 None:intergenic
AATGTAGTTGATGGAAGGAG+AGG 0.600382 5.2:-74261662 None:intergenic
GTTATGGATCAAGAAGGAAA+GGG 0.601148 5.2:+74262232 MS.gene016847:CDS
AGTTTGATTATATCAGCTAG+AGG 0.618867 5.2:-74261095 None:intergenic
TCAAAGATCACACAACAAGA+GGG 0.619274 5.2:+74261164 MS.gene016847:CDS
TAGAAAGTGCTATCTGTGGA+GGG 0.628315 5.2:-74261538 None:intergenic
TTCATAGAAAGTGCTATCTG+TGG 0.629318 5.2:-74261542 None:intergenic
CTCTTGAAGAATGCATGGAG+TGG 0.645200 5.2:+74261732 MS.gene016847:CDS
ATGGATTTGTAACACTGTTG+AGG 0.654238 5.2:+74261574 MS.gene016847:CDS
ATGACACCATTCATGGCACA+TGG 0.659660 5.2:+74260849 MS.gene016847:CDS
TTAATGTCAAAACCAAAAGG+TGG 0.668183 5.2:-74261887 None:intergenic
AATGGTGTCATCACTATGTG+TGG 0.687624 5.2:-74260837 None:intergenic
GATTGCAGTACACATGAGAG+AGG 0.690334 5.2:+74262282 MS.gene016847:CDS
TGTGGAATTGACAAGAACTG+TGG 0.715420 5.2:+74262165 MS.gene016847:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATCTGATATAATACAAAT+TGG - chr5.2:74261197-74261216 None:intergenic 20.0%
!!! ATTATATCAGATGTTTTTCT+TGG + chr5.2:74261203-74261222 MS.gene016847:CDS 20.0%
! AATATATCATTCACTACTTG+TGG + chr5.2:74261263-74261282 MS.gene016847:CDS 25.0%
! AGAATGAAACATAGTAAAAG+GGG + chr5.2:74261953-74261972 MS.gene016847:intron 25.0%
! AGAGAATGAAACATAGTAAA+AGG + chr5.2:74261951-74261970 MS.gene016847:intron 25.0%
! GAGAATGAAACATAGTAAAA+GGG + chr5.2:74261952-74261971 MS.gene016847:intron 25.0%
! TCTGATATAATACAAATTGG+AGG - chr5.2:74261194-74261213 None:intergenic 25.0%
! TTTGATATTAAAGAGCTAAG+AGG - chr5.2:74261149-74261168 None:intergenic 25.0%
!! AAAGTGAGAAACTTTTCATT+TGG + chr5.2:74261855-74261874 MS.gene016847:CDS 25.0%
!! AAGTGAGAAACTTTTCATTT+GGG + chr5.2:74261856-74261875 MS.gene016847:CDS 25.0%
!! CTTTGGCTTATATATCTATT+TGG + chr5.2:74261297-74261316 MS.gene016847:CDS 25.0%
!! TTCTTGAATTTTTCTTGCTA+GGG - chr5.2:74260895-74260914 None:intergenic 25.0%
!! TTTCTTGAATTTTTCTTGCT+AGG - chr5.2:74260896-74260915 None:intergenic 25.0%
!!! AACTTTTCATTTGGGTTATT+AGG + chr5.2:74261864-74261883 MS.gene016847:CDS 25.0%
!!! TAGCTTTATATATGATGCTA+GGG + chr5.2:74261429-74261448 MS.gene016847:intron 25.0%
AATAAGTGCTTCACAAATGA+TGG + chr5.2:74261811-74261830 MS.gene016847:CDS 30.0%
AATAGAGAAAGGTGAAGAAA+AGG + chr5.2:74262309-74262328 MS.gene016847:CDS 30.0%
AGTTTGATTATATCAGCTAG+AGG - chr5.2:74261098-74261117 None:intergenic 30.0%
ATAGAGAAAGGTGAAGAAAA+GGG + chr5.2:74262310-74262329 MS.gene016847:CDS 30.0%
CTTCCATCAACTACATTAAA+GGG + chr5.2:74261668-74261687 MS.gene016847:CDS 30.0%
GAAATAGTTATGGATCAAGA+AGG + chr5.2:74262226-74262245 MS.gene016847:CDS 30.0%
GAAGGTCATAGAAATAGTTA+TGG + chr5.2:74262216-74262235 MS.gene016847:CDS 30.0%
GATTGAGATATCATTGTTAG+AGG - chr5.2:74261003-74261022 None:intergenic 30.0%
GCATTAATGTCAAAACCAAA+AGG - chr5.2:74261893-74261912 None:intergenic 30.0%
TGTTGGATATTGCAGATTTA+AGG - chr5.2:74260971-74260990 None:intergenic 30.0%
TTAATGTCAAAACCAAAAGG+TGG - chr5.2:74261890-74261909 None:intergenic 30.0%
TTTCTATGAAATCTGATGGA+TGG + chr5.2:74261555-74261574 MS.gene016847:CDS 30.0%
! AAACAGATTCTGATGAGTTT+TGG + chr5.2:74261339-74261358 MS.gene016847:CDS 30.0%
! AACAGATTCTGATGAGTTTT+GGG + chr5.2:74261340-74261359 MS.gene016847:CDS 30.0%
! ATCAGATGTTTTTCTTGGTT+GGG + chr5.2:74261208-74261227 MS.gene016847:CDS 30.0%
! TATCAGATGTTTTTCTTGGT+TGG + chr5.2:74261207-74261226 MS.gene016847:CDS 30.0%
! TCTGTGCTTTACATTTCTTT+TGG + chr5.2:74261776-74261795 MS.gene016847:CDS 30.0%
!! ATTTAAGGTGTTGAATGTTG+AGG - chr5.2:74260956-74260975 None:intergenic 30.0%
!! CTAGCTTTATATATGATGCT+AGG + chr5.2:74261428-74261447 MS.gene016847:intron 30.0%
!! TGAGATATTTTTGTAGTACC+TGG - chr5.2:74261368-74261387 None:intergenic 30.0%
!! TTTAAGGTGTTGAATGTTGA+GGG - chr5.2:74260955-74260974 None:intergenic 30.0%
ACATAGTAAAAGGGGTTTGT+TGG + chr5.2:74261961-74261980 MS.gene016847:intron 35.0%
ACCAATGTTGCAAAGAGTTT+AGG + chr5.2:74261233-74261252 MS.gene016847:CDS 35.0%
ACTATCTTCAACTTCCTGTT+TGG + chr5.2:74261630-74261649 MS.gene016847:CDS 35.0%
AGCATACAATGCAAAGATGT+TGG + chr5.2:74262123-74262142 MS.gene016847:intron 35.0%
AGTTATGGATCAAGAAGGAA+AGG + chr5.2:74262231-74262250 MS.gene016847:CDS 35.0%
ATACAATGCAAAGATGTTGG+TGG + chr5.2:74262126-74262145 MS.gene016847:intron 35.0%
ATCAAAGATCACACAACAAG+AGG + chr5.2:74261163-74261182 MS.gene016847:CDS 35.0%
ATGGATTTGTAACACTGTTG+AGG + chr5.2:74261574-74261593 MS.gene016847:CDS 35.0%
ATTCTCTCTTCAAAACCTTC+TGG - chr5.2:74261938-74261957 None:intergenic 35.0%
ATTCTGTCACACAAATCAAC+AGG + chr5.2:74262010-74262029 MS.gene016847:intron 35.0%
CATTTCTAAGTCATTGTGGA+TGG + chr5.2:74262035-74262054 MS.gene016847:intron 35.0%
CCTTCCATCAACTACATTAA+AGG + chr5.2:74261667-74261686 MS.gene016847:CDS 35.0%
CCTTTCAATCATAGCCAATA+TGG + chr5.2:74261038-74261057 MS.gene016847:CDS 35.0%
GAACCCTTTAATGTAGTTGA+TGG - chr5.2:74261674-74261693 None:intergenic 35.0%
GCACTTTCTATGAAATCTGA+TGG + chr5.2:74261551-74261570 MS.gene016847:CDS 35.0%
GTTAGAGGAAGAAAATGTGT+TGG - chr5.2:74260988-74261007 None:intergenic 35.0%
GTTATGGATCAAGAAGGAAA+GGG + chr5.2:74262232-74262251 MS.gene016847:CDS 35.0%
TCAAAGATCACACAACAAGA+GGG + chr5.2:74261164-74261183 MS.gene016847:CDS 35.0%
TCCTAAACTCTTTGCAACAT+TGG - chr5.2:74261237-74261256 None:intergenic 35.0%
TGACATTAATGCAGAGTTCA+AGG + chr5.2:74261901-74261920 MS.gene016847:intron 35.0%
TTCTCTGTGTTCTCTATGTT+TGG - chr5.2:74261071-74261090 None:intergenic 35.0%
TTGAGGAGATTGAGACATTA+GGG + chr5.2:74261591-74261610 MS.gene016847:CDS 35.0%
! AAAGATGTTGGTGGAAGAAA+TGG + chr5.2:74262135-74262154 MS.gene016847:intron 35.0%
! AAGATGTTGGTGGAAGAAAT+GGG + chr5.2:74262136-74262155 MS.gene016847:intron 35.0%
! CCATATTGGCTATGATTGAA+AGG - chr5.2:74261041-74261060 None:intergenic 35.0%
! TCAGAATCTGTTTTCCTATG+AGG - chr5.2:74261332-74261351 None:intergenic 35.0%
! TGTGGAAAGTGTGATTTCTA+AGG + chr5.2:74262183-74262202 MS.gene016847:CDS 35.0%
! TGTTTGGTGGTAAACCATAT+TGG - chr5.2:74261055-74261074 None:intergenic 35.0%
! TTCTAAGGAAGATGTGAAGA+AGG + chr5.2:74262198-74262217 MS.gene016847:CDS 35.0%
! TTGTGGATGGAATTCTGTTT+TGG + chr5.2:74262048-74262067 MS.gene016847:intron 35.0%
! TTTGGTGTAATCTTCCTCAT+AGG + chr5.2:74261315-74261334 MS.gene016847:CDS 35.0%
!! ATGTGGAATCTGTAGTTTTG+AGG - chr5.2:74261458-74261477 None:intergenic 35.0%
!! CCTTTAATGTAGTTGATGGA+AGG - chr5.2:74261670-74261689 None:intergenic 35.0%
!! TCAAATTCAAAGTATCGTGC+CGG + chr5.2:74261692-74261711 MS.gene016847:CDS 35.0%
!! TTAAGGTGTTGAATGTTGAG+GGG - chr5.2:74260954-74260973 None:intergenic 35.0%
!! TTCATAGAAAGTGCTATCTG+TGG - chr5.2:74261545-74261564 None:intergenic 35.0%
!!! TGTGGAATCTGTAGTTTTGA+GGG - chr5.2:74261457-74261476 None:intergenic 35.0%
AAGAGCTAAGAGGAGTTTCA+AGG - chr5.2:74261139-74261158 None:intergenic 40.0%
AGAGAGGCAACAATAGAGAA+AGG + chr5.2:74262298-74262317 MS.gene016847:CDS 40.0%
AGATATCTAAGAGCAGCTGA+TGG + chr5.2:74261491-74261510 MS.gene016847:CDS 40.0%
AGGAAAGGGAAAAGAGATGA+AGG + chr5.2:74262246-74262265 MS.gene016847:CDS 40.0%
ATCTATGCATCTGAGAGATG+TGG - chr5.2:74261475-74261494 None:intergenic 40.0%
CATAGCTCTTGAAGAATGCA+TGG + chr5.2:74261727-74261746 MS.gene016847:CDS 40.0%
CATAGTGATGACACCATTCA+TGG + chr5.2:74260842-74260861 MS.gene016847:CDS 40.0%
GTTGAGGAGATTGAGACATT+AGG + chr5.2:74261590-74261609 MS.gene016847:CDS 40.0%
TCTGTGTTCTCTATGTTTGG+TGG - chr5.2:74261068-74261087 None:intergenic 40.0%
TGCTTCACAAATGATGGCAT+TGG + chr5.2:74261817-74261836 MS.gene016847:CDS 40.0%
TGTGGAATTGACAAGAACTG+TGG + chr5.2:74262165-74262184 MS.gene016847:intron 40.0%
TTCACTACTTGTGGTGCTTA+TGG + chr5.2:74261272-74261291 MS.gene016847:CDS 40.0%
TTGTGGTGCTTATGGAACTT+TGG + chr5.2:74261280-74261299 MS.gene016847:CDS 40.0%
! AGATGTTGGTGGAAGAAATG+GGG + chr5.2:74262137-74262156 MS.gene016847:intron 40.0%
! GAATTTTTCTTGCTAGGGCT+AGG - chr5.2:74260890-74260909 None:intergenic 40.0%
! GGAGCATTTCTAAGTCATTG+TGG + chr5.2:74262031-74262050 MS.gene016847:intron 40.0%
! GGTGGCTATTGTGATTTTGA+AGG - chr5.2:74260928-74260947 None:intergenic 40.0%
!! AAATGATGGCATTGGCTGAA+GGG + chr5.2:74261825-74261844 MS.gene016847:CDS 40.0%
!! AATGGTGTCATCACTATGTG+TGG - chr5.2:74260840-74260859 None:intergenic 40.0%
!! AATGTAGTTGATGGAAGGAG+AGG - chr5.2:74261665-74261684 None:intergenic 40.0%
!! ATAGAAAGTGCTATCTGTGG+AGG - chr5.2:74261542-74261561 None:intergenic 40.0%
!! GGGTTTGTTGGTGCATAAAT+GGG + chr5.2:74261973-74261992 MS.gene016847:intron 40.0%
!! GGTTTGTTGGTGCATAAATG+GGG + chr5.2:74261974-74261993 MS.gene016847:intron 40.0%
!! TAGAAAGTGCTATCTGTGGA+GGG - chr5.2:74261541-74261560 None:intergenic 40.0%
!! TTTTGGAGAGTCTTAGCCAA+GGG + chr5.2:74262065-74262084 MS.gene016847:intron 40.0%
AACCAATAATTGGCACCCCT+TGG - chr5.2:74262084-74262103 None:intergenic 45.0%
AAGGCAGAATGGTTACCAGA+AGG + chr5.2:74261920-74261939 MS.gene016847:intron 45.0%
AGATGACCATGTGCCATGAA+TGG - chr5.2:74260858-74260877 None:intergenic 45.0%
ATGACACCATTCATGGCACA+TGG + chr5.2:74260849-74260868 MS.gene016847:CDS 45.0%
ATGCAGAGTTCAAGGCAGAA+TGG + chr5.2:74261909-74261928 MS.gene016847:intron 45.0%
CTCTTGAAGAATGCATGGAG+TGG + chr5.2:74261732-74261751 MS.gene016847:CDS 45.0%
GATTGCAGTACACATGAGAG+AGG + chr5.2:74262282-74262301 MS.gene016847:CDS 45.0%
GCAAGTGGCCAACCAATAAT+TGG - chr5.2:74262094-74262113 None:intergenic 45.0%
GCATTCTTCAAGAGCTATGC+CGG - chr5.2:74261726-74261745 None:intergenic 45.0%
TATCGTGCCGGAAAAGAATC+CGG + chr5.2:74261704-74261723 MS.gene016847:CDS 45.0%
TGTGACAGAATCTCCAACTG+AGG - chr5.2:74262001-74262020 None:intergenic 45.0%
TTTCTTGCTAGGGCTAGGAA+TGG - chr5.2:74260885-74260904 None:intergenic 45.0%
TTTGGAGAGTCTTAGCCAAG+GGG + chr5.2:74262066-74262085 MS.gene016847:intron 45.0%
! AGCTATGCCGGATTCTTTTC+CGG - chr5.2:74261714-74261733 None:intergenic 45.0%
! GATGTTGGTGGAAGAAATGG+GGG + chr5.2:74262138-74262157 MS.gene016847:intron 45.0%
! TGGGTTATTAGGCCACCTTT+TGG + chr5.2:74261875-74261894 MS.gene016847:CDS 45.0%
!! AAGGGGTGCCAATTATTGGT+TGG + chr5.2:74262083-74262102 MS.gene016847:intron 45.0%
!! CAAATGATGGCATTGGCTGA+AGG + chr5.2:74261824-74261843 MS.gene016847:CDS 45.0%
!! CAACTTCCTGTTTGGTGTGT+TGG + chr5.2:74261638-74261657 MS.gene016847:CDS 45.0%
!! GGGGTTTGTTGGTGCATAAA+TGG + chr5.2:74261972-74261991 MS.gene016847:intron 45.0%
!!! GTTTTGGAGAGTCTTAGCCA+AGG + chr5.2:74262064-74262083 MS.gene016847:intron 45.0%
!!! TCTGATGAGTTTTGGGTTCC+AGG + chr5.2:74261347-74261366 MS.gene016847:CDS 45.0%
AGAGGACCAACACACCAAAC+AGG - chr5.2:74261647-74261666 None:intergenic 50.0%
CAGCTGATGGAGCTGATAAC+TGG + chr5.2:74261504-74261523 MS.gene016847:CDS 50.0%
GCATAAATGGGGACCTCAGT+TGG + chr5.2:74261985-74262004 MS.gene016847:intron 50.0%
GGGCTCTTCATTGAGAGCAA+TGG + chr5.2:74262330-74262349 MS.gene016847:CDS 50.0%
GTGTTGAATGTTGAGGGGAG+TGG - chr5.2:74260949-74260968 None:intergenic 50.0%
TATGCTTGCTCTGCTGCAAG+TGG - chr5.2:74262109-74262128 None:intergenic 50.0%
TTGAATGTTGAGGGGAGTGG+TGG - chr5.2:74260946-74260965 None:intergenic 50.0%
!! AGCCAAGGGGTGCCAATTAT+TGG + chr5.2:74262079-74262098 MS.gene016847:intron 50.0%
GGAAGAAATGGGGGTGAGTG+TGG + chr5.2:74262147-74262166 MS.gene016847:intron 55.0%
!! GATGGCATTGGCTGAAGGGT+TGG + chr5.2:74261829-74261848 MS.gene016847:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 74260822 74262384 74260822 ID=MS.gene016847
chr5.2 mRNA 74260822 74262384 74260822 ID=MS.gene016847.t1;Parent=MS.gene016847
chr5.2 exon 74260822 74261368 74260822 ID=MS.gene016847.t1.exon1;Parent=MS.gene016847.t1
chr5.2 CDS 74260822 74261368 74260822 ID=cds.MS.gene016847.t1;Parent=MS.gene016847.t1
chr5.2 exon 74261450 74261915 74261450 ID=MS.gene016847.t1.exon2;Parent=MS.gene016847.t1
chr5.2 CDS 74261450 74261915 74261450 ID=cds.MS.gene016847.t1;Parent=MS.gene016847.t1
chr5.2 exon 74262180 74262384 74262180 ID=MS.gene016847.t1.exon3;Parent=MS.gene016847.t1
chr5.2 CDS 74262180 74262384 74262180 ID=cds.MS.gene016847.t1;Parent=MS.gene016847.t1
Gene Sequence

>MS.gene016847

ATGGCAGAGAAGAAACCACACATAGTGATGACACCATTCATGGCACATGGTCATCTCATTCCATTCCTAGCCCTAGCAAGAAAAATTCAAGAAACAACTACTACCTTCAAAATCACAATAGCCACCACTCCCCTCAACATTCAACACCTTAAATCTGCAATATCCAACACATTTTCTTCCTCTAACAATGATATCTCAATCGATCTTGCTGAATTACCTTTCAATCATAGCCAATATGGTTTACCACCAAACATAGAGAACACAGAGAAGCTTCCTCTAGCTGATATAATCAAACTCTTTCAAGCATCAACTAGCCTTGAAACTCCTCTTAGCTCTTTAATATCAAAGATCACACAACAAGAGGGTCAACCTCCAATTTGTATTATATCAGATGTTTTTCTTGGTTGGGTTACCAATGTTGCAAAGAGTTTAGGAACTAAGAATATATCATTCACTACTTGTGGTGCTTATGGAACTTTGGCTTATATATCTATTTGGTGTAATCTTCCTCATAGGAAAACAGATTCTGATGAGTTTTGGGTTCCAGGTACTACAAAAATATCTCATTTATAACTATTTTTTGTTCAGCACAAAAACAAAATCTAACTAGCTTTATATATGATGCTAGGGTTCCCTCAAAACTACAGATTCCACATCTCTCAGATGCATAGATATCTAAGAGCAGCTGATGGAGCTGATAACTGGTCAAAATTCTTCCCTCCACAGATAGCACTTTCTATGAAATCTGATGGATGGATTTGTAACACTGTTGAGGAGATTGAGACATTAGGGCTGCAACTATTGAAGAACTATCTTCAACTTCCTGTTTGGTGTGTTGGTCCTCTCCTTCCATCAACTACATTAAAGGGTTCAAATTCAAAGTATCGTGCCGGAAAAGAATCCGGCATAGCTCTTGAAGAATGCATGGAGTGGCTTGATTTGAAAGATGAGAATTCTGTGCTTTACATTTCTTTTGGATCACAGAACACAATAAGTGCTTCACAAATGATGGCATTGGCTGAAGGGTTGGAAGAAAGTGAGAAACTTTTCATTTGGGTTATTAGGCCACCTTTTGGTTTTGACATTAATGCAGAGTTCAAGGCAGAATGGTTACCAGAAGGTTTTGAAGAGAGAATGAAACATAGTAAAAGGGGTTTGTTGGTGCATAAATGGGGACCTCAGTTGGAGATTCTGTCACACAAATCAACAGGAGCATTTCTAAGTCATTGTGGATGGAATTCTGTTTTGGAGAGTCTTAGCCAAGGGGTGCCAATTATTGGTTGGCCACTTGCAGCAGAGCAAGCATACAATGCAAAGATGTTGGTGGAAGAAATGGGGGTGAGTGTGGAATTGACAAGAACTGTGGAAAGTGTGATTTCTAAGGAAGATGTGAAGAAGGTCATAGAAATAGTTATGGATCAAGAAGGAAAGGGAAAAGAGATGAAGGAGAAAGCAAATGAGATTGCAGTACACATGAGAGAGGCAACAATAGAGAAAGGTGAAGAAAAGGGCTCTTCATTGAGAGCAATGGATGATTTTGTCAGAACCATTTTGCAAATATAA
Protein sequence

>MS.gene016847.t1

MAEKKPHIVMTPFMAHGHLIPFLALARKIQETTTTFKITIATTPLNIQHLKSAISNTFSSSNNDISIDLAELPFNHSQYGLPPNIENTEKLPLADIIKLFQASTSLETPLSSLISKITQQEGQPPICIISDVFLGWVTNVAKSLGTKNISFTTCGAYGTLAYISIWCNLPHRKTDSDEFWVPGFPQNYRFHISQMHRYLRAADGADNWSKFFPPQIALSMKSDGWICNTVEEIETLGLQLLKNYLQLPVWCVGPLLPSTTLKGSNSKYRAGKESGIALEECMEWLDLKDENSVLYISFGSQNTISASQMMALAEGLEESEKLFIWVIRPPFGFDINAETVESVISKEDVKKVIEIVMDQEGKGKEMKEKANEIAVHMREATIEKGEEKGSSLRAMDDFVRTILQI