AlfalfaGEDB | MS.gene047862

M. sativa cultivar XinJiangDaYe / MS.gene047862

KEGG: K23260
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047862.t1	XP_013456870.2	93.1	173	12	0	1	173	17	189	4.90E-90	340.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047862.t1	Q9AT54	53.8	173	80	0	1	173	12	184	1.6e-52	207.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047862.t1	A0A396I980	93.1	173	12	0	1	173	17	189	3.5e-90	340.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene047862	MS.gene59335	PPI
MS.gene047862	MS.gene89850	PPI
MS.gene047862	MS.gene37296	PPI
MS.gene047862	MS.gene010467	PPI
MS.gene047862	MS.gene78851	PPI
MS.gene047862	MS.gene59333	PPI
MS.gene047862	MS.gene031152	PPI
MS.gene047862	MS.gene86099	PPI
MS.gene047862	MS.gene86081	PPI
MS.gene047862	MS.gene031167	PPI
MS.gene047862	MS.gene031160	PPI
MS.gene047862	MS.gene86120	PPI
MS.gene047862	MS.gene021240	PPI
MS.gene047862	MS.gene016847	PPI
MS.gene031143	MS.gene047862	PPI
MS.gene047862	MS.gene78852	PPI
MS.gene047862	MS.gene025918	PPI
MS.gene047862	MS.gene031158	PPI
MS.gene047862	MS.gene050638	PPI
MS.gene047862	MS.gene031153	PPI
MS.gene047862	MS.gene32233	PPI
MS.gene047862	MS.gene37842	PPI
MS.gene047862	MS.gene41289	PPI
MS.gene047862	MS.gene56204	PPI
MS.gene047862	MS.gene031156	PPI
MS.gene047862	MS.gene024453	PPI
MS.gene047862	MS.gene78850	PPI
MS.gene047862	MS.gene39834	PPI
MS.gene047862	MS.gene031164	PPI
MS.gene047862	MS.gene009405	PPI
MS.gene058365	MS.gene047862	PPI
MS.gene047862	MS.gene99403	PPI
MS.gene047862	MS.gene031165	PPI
MS.gene047862	MS.gene047750	PPI
MS.gene031154	MS.gene047862	PPI
MS.gene031157	MS.gene047862	PPI
MS.gene047862	MS.gene89852	PPI
MS.gene047862	MS.gene031149	PPI
MS.gene047862	MS.gene017258	PPI
MS.gene047862	MS.gene010469	PPI
MS.gene047862	MS.gene86093	PPI
MS.gene047862	MS.gene95161	PPI
MS.gene047862	MS.gene009637	PPI
MS.gene047862	MS.gene56827	PPI
MS.gene031159	MS.gene047862	PPI
MS.gene047862	MS.gene37295	PPI
MS.gene047862	MS.gene031151	PPI
MS.gene047862	MS.gene37297	PPI
MS.gene047862	MS.gene86089	PPI
MS.gene047862	MS.gene031141	PPI
MS.gene047862	MS.gene86118	PPI
MS.gene047862	MS.gene031171	PPI
MS.gene047862	MS.gene84770	PPI
MS.gene047862	MS.gene22310	PPI
MS.gene047862	MS.gene031133	PPI
MS.gene047862	MS.gene22805	PPI
MS.gene047862	MS.gene86101	PPI
MS.gene047862	MS.gene032316	PPI
MS.gene047862	MS.gene26235	PPI
MS.gene047862	MS.gene86117	PPI
MS.gene047862	MS.gene86114	PPI
MS.gene047862	MS.gene86109	PPI
MS.gene047862	MS.gene86102	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047862.t1	MTR_4g485620	94.048	168	10	0	6	173	1	168	6.41e-114	332
MS.gene047862.t1	MTR_8g066610	79.769	173	35	0	1	173	16	188	6.34e-100	297
MS.gene047862.t1	MTR_4g485630	53.448	174	75	2	1	173	16	184	2.01e-57	187
MS.gene047862.t1	MTR_4g485590	54.913	173	52	1	1	173	16	162	1.34e-49	165
MS.gene047862.t1	MTR_7g102550	44.000	175	96	1	1	173	16	190	8.21e-44	152
MS.gene047862.t1	MTR_7g071040	41.860	172	100	0	2	173	25	196	9.29e-39	138
MS.gene047862.t1	MTR_7g070660	40.237	169	95	2	5	170	22	187	8.71e-38	135
MS.gene047862.t1	MTR_7g070610	39.157	166	101	0	5	170	24	189	5.20e-37	134
MS.gene047862.t1	MTR_5g016660	37.572	173	108	0	1	173	17	189	1.68e-36	132
MS.gene047862.t1	MTR_8g056740	60.169	118	18	1	23	140	3	91	3.92e-36	130
MS.gene047862.t1	MTR_7g070930	38.953	172	105	0	2	173	22	193	8.71e-36	130
MS.gene047862.t1	MTR_7g055710	37.349	166	104	0	5	170	22	187	9.43e-36	130
MS.gene047862.t1	MTR_7g070910	38.462	169	104	0	5	173	22	190	5.10e-35	128
MS.gene047862.t1	MTR_7g070860	38.922	167	100	2	5	170	18	183	5.42e-35	128
MS.gene047862.t1	MTR_7g070740	38.554	166	102	0	5	170	22	187	5.65e-35	128
MS.gene047862.t1	MTR_7g117405	39.130	184	108	2	1	180	19	202	1.55e-34	127
MS.gene047862.t1	MTR_7g070800	37.952	166	103	0	5	170	17	182	3.51e-34	126
MS.gene047862.t1	MTR_5g045960	38.857	175	104	2	2	173	17	191	3.96e-33	123
MS.gene047862.t1	MTR_5g045970	37.640	178	102	3	1	173	23	196	4.68e-32	120
MS.gene047862.t1	MTR_7g070940	37.870	169	105	0	5	173	20	188	5.16e-32	120
MS.gene047862.t1	MTR_1g062380	36.047	172	105	4	5	173	27	196	6.15e-32	120
MS.gene047862.t1	MTR_6g035295	37.288	177	104	3	1	173	19	192	6.20e-32	120
MS.gene047862.t1	MTR_5g039900	35.838	173	111	0	1	173	20	192	6.76e-32	120
MS.gene047862.t1	MTR_7g071050	38.095	168	93	3	5	169	24	183	3.76e-31	117
MS.gene047862.t1	MTR_0536s0010	38.323	167	92	3	1	167	28	183	4.26e-31	117
MS.gene047862.t1	MTR_4g117950	40.120	167	90	3	1	167	13	169	4.32e-31	117
MS.gene047862.t1	MTR_4g024020	38.418	177	105	3	1	173	16	192	5.31e-31	117
MS.gene047862.t1	MTR_7g102560	37.234	188	108	5	1	182	16	199	2.18e-30	115
MS.gene047862.t1	MTR_7g070810	35.503	169	109	0	5	173	20	188	2.28e-30	115
MS.gene047862.t1	MTR_7g102520	34.857	175	108	2	1	173	19	189	2.46e-30	115
MS.gene047862.t1	MTR_7g070780	37.725	167	102	2	5	170	22	187	4.74e-30	115
MS.gene047862.t1	MTR_0536s0020	37.870	169	90	3	5	170	29	185	1.14e-29	114
MS.gene047862.t1	MTR_4g108250	37.209	172	105	1	5	173	22	193	5.87e-29	112
MS.gene047862.t1	MTR_8g056710	86.885	61	7	1	114	173	18	78	8.21e-29	106
MS.gene047862.t1	MTR_8g044140	36.601	153	96	1	21	173	4	155	1.59e-28	110
MS.gene047862.t1	MTR_7g102490	35.417	192	111	6	1	182	16	204	1.92e-28	110
MS.gene047862.t1	MTR_7g102460	36.216	185	111	4	1	178	16	200	2.14e-28	110
MS.gene047862.t1	MTR_4g117980	33.136	169	108	2	5	170	22	188	2.26e-28	110
MS.gene047862.t1	MTR_1g040310	33.526	173	114	1	1	173	22	193	3.63e-28	109
MS.gene047862.t1	MTR_4g485640	36.471	170	95	3	5	173	220	377	3.78e-26	104
MS.gene047862.t1	MTR_2g035020	31.977	172	112	2	1	169	18	187	2.05e-25	102
MS.gene047862.t1	MTR_7g070870	34.320	169	108	1	5	173	30	195	2.79e-25	101
MS.gene047862.t1	MTR_4g118000	34.940	166	96	2	5	170	23	176	1.77e-24	99.4
MS.gene047862.t1	MTR_4g117890	33.133	166	102	2	5	170	24	180	4.15e-24	98.6
MS.gene047862.t1	MTR_5g040030	33.526	173	108	3	5	173	25	194	2.11e-23	96.7
MS.gene047862.t1	MTR_2g034990	30.233	172	115	2	1	169	18	187	3.73e-23	95.9
MS.gene047862.t1	MTR_7g039570	32.948	173	109	3	5	173	25	194	4.71e-23	92.8
MS.gene047862.t1	MTR_6g035265	31.977	172	109	2	1	172	18	181	1.23e-22	94.4
MS.gene047862.t1	MTR_4g031800	30.556	144	100	0	2	145	17	160	1.23e-22	94.4
MS.gene047862.t1	MTR_4g117960	30.723	166	112	2	5	169	22	185	5.67e-22	92.4
MS.gene047862.t1	MTR_0536s0030	35.333	150	82	3	24	170	10	147	1.09e-21	90.9
MS.gene047862.t1	MTR_7g102450	32.370	173	105	2	1	173	18	178	1.39e-21	91.3
MS.gene047862.t1	MTR_7g113320	39.252	107	63	1	69	173	11	117	3.14e-21	87.0
MS.gene047862.t1	MTR_7g012120	31.977	172	110	4	1	169	23	190	5.14e-21	89.7
MS.gene047862.t1	MTR_5g029800	27.907	172	115	2	1	169	18	183	7.74e-20	86.3
MS.gene047862.t1	MTR_6g035185	30.952	168	111	2	5	169	22	187	3.55e-19	84.3
MS.gene047862.t1	MTR_8g032950	31.288	163	110	1	5	167	23	183	1.17e-18	82.8
MS.gene047862.t1	MTR_5g067170	28.395	162	108	2	5	163	22	178	1.70e-17	79.7
MS.gene047862.t1	MTR_5g087620	28.877	187	119	6	1	176	17	200	4.84e-16	75.5
MS.gene047862.t1	MTR_7g470610	43.548	62	35	0	109	170	1	62	1.15e-13	67.8
MS.gene047862.t1	MTR_7g070583	43.548	62	35	0	109	170	1	62	1.15e-13	67.8
MS.gene047862.t1	MTR_7g470590	34.951	103	66	1	5	106	22	124	1.47e-12	62.0
MS.gene047862.t1	MTR_7g070570	34.951	103	66	1	5	106	22	124	1.47e-12	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene047862.t1	AT4G34135	50.802	187	82	3	1	178	18	203	1.52e-61	194
MS.gene047862.t1	AT4G34135	50.802	187	82	3	1	178	18	203	3.61e-60	194
MS.gene047862.t1	AT4G34131	50.794	189	82	4	1	179	17	204	6.42e-59	191
MS.gene047862.t1	AT4G34138	49.444	180	78	3	1	170	18	194	2.76e-55	182
MS.gene047862.t1	AT2G15490	47.458	177	85	2	1	169	14	190	7.92e-54	172
MS.gene047862.t1	AT2G15490	46.961	181	88	2	1	173	14	194	4.73e-52	173
MS.gene047862.t1	AT2G15490	46.961	181	88	2	1	173	14	194	5.57e-52	173
MS.gene047862.t1	AT2G15480	46.409	181	89	2	1	173	17	197	1.63e-50	169
MS.gene047862.t1	AT2G15480	46.409	181	89	2	1	173	17	197	1.97e-50	169
MS.gene047862.t1	AT3G53150	38.418	177	104	3	1	173	29	204	4.16e-35	129
MS.gene047862.t1	AT2G36750	39.444	180	98	4	1	173	17	192	5.91e-35	128
MS.gene047862.t1	AT2G36780	40.000	180	97	4	1	173	21	196	3.12e-34	126
MS.gene047862.t1	AT2G36770	37.500	176	107	2	1	173	21	196	6.92e-34	125
MS.gene047862.t1	AT2G36790	37.778	180	101	4	1	173	20	195	2.45e-33	124
MS.gene047862.t1	AT2G36800	37.222	180	102	4	1	173	19	194	4.07e-33	123
MS.gene047862.t1	AT2G36760	37.222	180	102	5	1	173	21	196	8.87e-32	119
MS.gene047862.t1	AT3G53160	35.028	177	110	3	1	173	15	190	2.24e-29	113
MS.gene047862.t1	AT1G10400	34.503	171	100	4	1	164	14	179	1.27e-19	85.9
MS.gene047862.t1	AT2G16890	33.140	172	103	4	1	164	16	183	3.51e-18	80.5
MS.gene047862.t1	AT2G16890	33.140	172	103	4	1	164	16	183	3.51e-18	80.5
MS.gene047862.t1	AT5G14860	30.168	179	107	5	1	164	15	190	5.52e-18	81.3
MS.gene047862.t1	AT2G16890	33.140	172	103	4	1	164	16	183	6.48e-18	80.9
MS.gene047862.t1	AT2G16890	33.140	172	103	4	1	164	16	183	7.09e-18	80.9

Find 47 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTGATTCTGCTACAAAATT+TGG	0.149218	4.4:+26680065	MS.gene047862:CDS
GGATATCGATGTTATTAAAA+TGG	0.244672	4.4:-26679854	None:intergenic
TTAAAGGCTCATACTGTTCC+AGG	0.301015	4.4:-26680145	None:intergenic
CGAAATTATATGCAGAAATC+AGG	0.304561	4.4:+26680288	MS.gene047862:intron
TTCGTTATTCCTAATCTTCC+TGG	0.313410	4.4:+26680194	MS.gene047862:CDS
CACAAGGGAACTTGATGGTT+TGG	0.348011	4.4:-26679875	None:intergenic
TTTATATTCCCAGGAAGATT+AGG	0.353383	4.4:-26680203	None:intergenic
TATGATACCCACCATTGATA+TGG	0.358951	4.4:+26679737	MS.gene047862:CDS
ATTTGCTTCAAAAGGTGTTA+AGG	0.402044	4.4:+26679767	MS.gene047862:CDS
GCCAAAATATTTGCTTCAAA+AGG	0.405426	4.4:+26679759	MS.gene047862:CDS
CTACAAAATTTGGTATTCCT+AGG	0.425916	4.4:+26680075	MS.gene047862:CDS
GAATCAGAGGTGAGGAGTTA+TGG	0.439127	4.4:+26680311	MS.gene047862:CDS
ATTGTGTGCTTCACAATGCC+TGG	0.442439	4.4:+26680127	MS.gene047862:CDS
TGCAATCCCTACAGTTTCCC+TGG	0.443685	4.4:+26679935	MS.gene047862:CDS
TTGCTGATATGTTCTTTCCA+TGG	0.445514	4.4:+26680039	MS.gene047862:CDS
CTCTACACAAGGGAACTTGA+TGG	0.447905	4.4:-26679880	None:intergenic
GTTGAGGGGTGTGGTAACTA+TGG	0.449523	4.4:-26679793	None:intergenic
TTGAAGCAATAGTTCTTCAA+AGG	0.464257	4.4:-26679997	None:intergenic
TGCTGATATGTTCTTTCCAT+GGG	0.466725	4.4:+26680040	MS.gene047862:CDS
AGGATTGTATTCCATTCCAC+TGG	0.475266	4.4:+26680095	MS.gene047862:CDS
TAAAATGAAAGGTTTGTTGA+GGG	0.476210	4.4:-26679808	None:intergenic
CTAGTAGCAGTAAAGAATGT+AGG	0.485771	4.4:-26679960	None:intergenic
TCGTTATTCCTAATCTTCCT+GGG	0.486747	4.4:+26680195	MS.gene047862:CDS
TATCAATGGTGGGTATCATA+TGG	0.492613	4.4:-26679734	None:intergenic
CAGTAAAGAATGTAGGAACC+AGG	0.503230	4.4:-26679953	None:intergenic
TCTATGGATCTTAAAATGAA+AGG	0.513821	4.4:-26679819	None:intergenic
TGAAGCAATAGTTCTTCAAA+GGG	0.519455	4.4:-26679996	None:intergenic
ATCAAGTTCCCTTGTGTAGA+GGG	0.524327	4.4:+26679882	MS.gene047862:CDS
TTAAAATGAAAGGTTTGTTG+AGG	0.526459	4.4:-26679809	None:intergenic
GTGGAATGGAATACAATCCT+AGG	0.526710	4.4:-26680092	None:intergenic
GAAAGGTTTGTTGAGGGGTG+TGG	0.545161	4.4:-26679802	None:intergenic
ATGAAAAGAAACCAGTGGAA+TGG	0.545770	4.4:-26680106	None:intergenic
AAGTTCCCTTGTGTAGAGGG+TGG	0.569695	4.4:+26679885	MS.gene047862:CDS
GAAATTATATGCAGAAATCA+GGG	0.575596	4.4:+26680289	MS.gene047862:intron
CATCAAGTTCCCTTGTGTAG+AGG	0.577864	4.4:+26679881	MS.gene047862:CDS
TAGGAACCAGGGAAACTGTA+GGG	0.586700	4.4:-26679941	None:intergenic
AAAATGAAAGGTTTGTTGAG+GGG	0.587175	4.4:-26679807	None:intergenic
GTAGCAGAATCAGTTGCCCA+TGG	0.601415	4.4:-26680056	None:intergenic
AGTAAAGAATGTAGGAACCA+GGG	0.602699	4.4:-26679952	None:intergenic
TGCAGAAATCAGGGAATCAG+AGG	0.604245	4.4:+26680298	MS.gene047862:intron
GTAGGAACCAGGGAAACTGT+AGG	0.615639	4.4:-26679942	None:intergenic
GTAGAGGGTGGTTTACCTGA+AGG	0.628374	4.4:+26679897	MS.gene047862:CDS
GGTAAACCACCCTCTACACA+AGG	0.630895	4.4:-26679891	None:intergenic
AAATCAGGGAATCAGAGGTG+AGG	0.651564	4.4:+26680303	MS.gene047862:CDS
ACACAATGAAAAGAAACCAG+TGG	0.706325	4.4:-26680111	None:intergenic
GTAAACCACCCTCTACACAA+GGG	0.757379	4.4:-26679890	None:intergenic
ATATCAGCAACAATGCAGTG+TGG	0.781281	4.4:-26680026	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TCATTTTTTGTGAATATATT+TGG	-	chr4.4:26680248-26680267	None:intergenic	15.0%
!!!	TCAGAAGAAACATTTTTTAA+AGG	-	chr4.4:26680164-26680183	None:intergenic	20.0%
!	GAAATTATATGCAGAAATCA+GGG	+	chr4.4:26680289-26680308	MS.gene047862:intron	25.0%
!	GGATATCGATGTTATTAAAA+TGG	-	chr4.4:26679857-26679876	None:intergenic	25.0%
!	TCTATGGATCTTAAAATGAA+AGG	-	chr4.4:26679822-26679841	None:intergenic	25.0%
!!	ATATAATTTCGCGATGTTTT+GGG	-	chr4.4:26680279-26680298	None:intergenic	25.0%
!!	ATGGATTTTGAATTGTTCTA+TGG	-	chr4.4:26679838-26679857	None:intergenic	25.0%
!!!	AAATATTTTGGCCATATCAA+TGG	-	chr4.4:26679751-26679770	None:intergenic	25.0%
!!!	ACCTTTTGAAGCAAATATTT+TGG	-	chr4.4:26679763-26679782	None:intergenic	25.0%
!!!	TAAAATGAAAGGTTTGTTGA+GGG	-	chr4.4:26679811-26679830	None:intergenic	25.0%
!!!	TTAAAATGAAAGGTTTGTTG+AGG	-	chr4.4:26679812-26679831	None:intergenic	25.0%
	CGAAATTATATGCAGAAATC+AGG	+	chr4.4:26680288-26680307	MS.gene047862:intron	30.0%
	CTACAAAATTTGGTATTCCT+AGG	+	chr4.4:26680075-26680094	MS.gene047862:CDS	30.0%
	CTGGGAATATAAAAATGACA+AGG	+	chr4.4:26680213-26680232	MS.gene047862:CDS	30.0%
	GCCAAAATATTTGCTTCAAA+AGG	+	chr4.4:26679759-26679778	MS.gene047862:CDS	30.0%
	TGAAGCAATAGTTCTTCAAA+GGG	-	chr4.4:26679999-26680018	None:intergenic	30.0%
	TTGAAGCAATAGTTCTTCAA+AGG	-	chr4.4:26680000-26680019	None:intergenic	30.0%
	TTTATATTCCCAGGAAGATT+AGG	-	chr4.4:26680206-26680225	None:intergenic	30.0%
!	ACTGATTCTGCTACAAAATT+TGG	+	chr4.4:26680065-26680084	MS.gene047862:CDS	30.0%
!	CATATAATTTCGCGATGTTT+TGG	-	chr4.4:26680280-26680299	None:intergenic	30.0%
!!	AAAATGAAAGGTTTGTTGAG+GGG	-	chr4.4:26679810-26679829	None:intergenic	30.0%
!!	ATTTGCTTCAAAAGGTGTTA+AGG	+	chr4.4:26679767-26679786	MS.gene047862:CDS	30.0%
!!!	CTTGTCATTTTTATATTCCC+AGG	-	chr4.4:26680215-26680234	None:intergenic	30.0%
	ACACAATGAAAAGAAACCAG+TGG	-	chr4.4:26680114-26680133	None:intergenic	35.0%
	AGTAAAGAATGTAGGAACCA+GGG	-	chr4.4:26679955-26679974	None:intergenic	35.0%
	ATGAAAAGAAACCAGTGGAA+TGG	-	chr4.4:26680109-26680128	None:intergenic	35.0%
	CTAGTAGCAGTAAAGAATGT+AGG	-	chr4.4:26679963-26679982	None:intergenic	35.0%
	TATGATACCCACCATTGATA+TGG	+	chr4.4:26679737-26679756	MS.gene047862:CDS	35.0%
	TCGTTATTCCTAATCTTCCT+GGG	+	chr4.4:26680195-26680214	MS.gene047862:CDS	35.0%
	TGCTGATATGTTCTTTCCAT+GGG	+	chr4.4:26680040-26680059	MS.gene047862:CDS	35.0%
	TTCGTTATTCCTAATCTTCC+TGG	+	chr4.4:26680194-26680213	MS.gene047862:CDS	35.0%
	TTGCTGATATGTTCTTTCCA+TGG	+	chr4.4:26680039-26680058	MS.gene047862:CDS	35.0%
!!	ATTTTGGCCATATCAATGGT+GGG	-	chr4.4:26679747-26679766	None:intergenic	35.0%
!!	TATCAATGGTGGGTATCATA+TGG	-	chr4.4:26679737-26679756	None:intergenic	35.0%
!!!	TATTTTGGCCATATCAATGG+TGG	-	chr4.4:26679748-26679767	None:intergenic	35.0%
	AGGATTGTATTCCATTCCAC+TGG	+	chr4.4:26680095-26680114	MS.gene047862:CDS	40.0%
	ATATCAGCAACAATGCAGTG+TGG	-	chr4.4:26680029-26680048	None:intergenic	40.0%
	ATCAAGTTCCCTTGTGTAGA+GGG	+	chr4.4:26679882-26679901	MS.gene047862:CDS	40.0%
	CAGTAAAGAATGTAGGAACC+AGG	-	chr4.4:26679956-26679975	None:intergenic	40.0%
	GTGGAATGGAATACAATCCT+AGG	-	chr4.4:26680095-26680114	None:intergenic	40.0%
	TTAAAGGCTCATACTGTTCC+AGG	-	chr4.4:26680148-26680167	None:intergenic	40.0%
!	TCAACATTTTCACAGCCTTC+AGG	-	chr4.4:26679915-26679934	None:intergenic	40.0%
	AAATCAGGGAATCAGAGGTG+AGG	+	chr4.4:26680303-26680322	MS.gene047862:CDS	45.0%
	ATTGTGTGCTTCACAATGCC+TGG	+	chr4.4:26680127-26680146	MS.gene047862:CDS	45.0%
	CATCAAGTTCCCTTGTGTAG+AGG	+	chr4.4:26679881-26679900	MS.gene047862:CDS	45.0%
	CTCTACACAAGGGAACTTGA+TGG	-	chr4.4:26679883-26679902	None:intergenic	45.0%
	GAATCAGAGGTGAGGAGTTA+TGG	+	chr4.4:26680311-26680330	MS.gene047862:CDS	45.0%
	GTAAACCACCCTCTACACAA+GGG	-	chr4.4:26679893-26679912	None:intergenic	45.0%
	TAGGAACCAGGGAAACTGTA+GGG	-	chr4.4:26679944-26679963	None:intergenic	45.0%
	TGCAGAAATCAGGGAATCAG+AGG	+	chr4.4:26680298-26680317	MS.gene047862:intron	45.0%
!	CACAAGGGAACTTGATGGTT+TGG	-	chr4.4:26679878-26679897	None:intergenic	45.0%
	AAGTTCCCTTGTGTAGAGGG+TGG	+	chr4.4:26679885-26679904	MS.gene047862:CDS	50.0%
	GGTAAACCACCCTCTACACA+AGG	-	chr4.4:26679894-26679913	None:intergenic	50.0%
	GTAGAGGGTGGTTTACCTGA+AGG	+	chr4.4:26679897-26679916	MS.gene047862:CDS	50.0%
	GTAGCAGAATCAGTTGCCCA+TGG	-	chr4.4:26680059-26680078	None:intergenic	50.0%
	GTAGGAACCAGGGAAACTGT+AGG	-	chr4.4:26679945-26679964	None:intergenic	50.0%
	TGCAATCCCTACAGTTTCCC+TGG	+	chr4.4:26679935-26679954	MS.gene047862:CDS	50.0%
!	GTTGAGGGGTGTGGTAACTA+TGG	-	chr4.4:26679796-26679815	None:intergenic	50.0%
!!	GAAAGGTTTGTTGAGGGGTG+TGG	-	chr4.4:26679805-26679824	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	26679723	26680348	26679723	ID=MS.gene047862
chr4.4	mRNA	26679723	26680348	26679723	ID=MS.gene047862.t1;Parent=MS.gene047862
chr4.4	exon	26679723	26680234	26679723	ID=MS.gene047862.t1.exon1;Parent=MS.gene047862.t1
chr4.4	CDS	26679723	26680234	26679723	ID=cds.MS.gene047862.t1;Parent=MS.gene047862.t1
chr4.4	exon	26680303	26680348	26680303	ID=MS.gene047862.t1.exon2;Parent=MS.gene047862.t1
chr4.4	CDS	26680303	26680348	26680303	ID=cds.MS.gene047862.t1;Parent=MS.gene047862.t1

Gene Sequence

>MS.gene047862

ATGAGTCATGACCATATGATACCCACCATTGATATGGCCAAAATATTTGCTTCAAAAGGTGTTAAGGCTACCATAGTTACCACACCCCTCAACAAACCTTTCATTTTAAGATCCATAGAACAATTCAAAATCCATTTTAATAACATCGATATCCAAACCATCAAGTTCCCTTGTGTAGAGGGTGGTTTACCTGAAGGCTGTGAAAATGTTGATGCAATCCCTACAGTTTCCCTGGTTCCTACATTCTTTACTGCTACTAGATTGCTTCAACAACCCTTTGAAGAACTATTGCTTCAACAAAAACCACACTGCATTGTTGCTGATATGTTCTTTCCATGGGCAACTGATTCTGCTACAAAATTTGGTATTCCTAGGATTGTATTCCATTCCACTGGTTTCTTTTCATTGTGTGCTTCACAATGCCTGGAACAGTATGAGCCTTTAAAAAATGTTTCTTCTGAAACAGAAGAATTCGTTATTCCTAATCTTCCTGGGAATATAAAAATGACAAGGTTGCAGCTGCCAAATATATTCACAAAAAATGATGCAATAACCCAAAACATCGCGAAATTATATGCAGAAATCAGGGAATCAGAGGTGAGGAGTTATGGCGTTATTGTCAATAG

Protein sequence

>MS.gene047862.t1

MSHDHMIPTIDMAKIFASKGVKATIVTTPLNKPFILRSIEQFKIHFNNIDIQTIKFPCVEGGLPEGCENVDAIPTVSLVPTFFTATRLLQQPFEELLLQQKPHCIVADMFFPWATDSATKFGIPRIVFHSTGFFSLCASQCLEQYEPLKNVSSETEEFVIPNLPGNIKMTRNQGIRGEELWRYCQ