Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017305.t1 | XP_003616135.1 | 98.6 | 209 | 2 | 1 | 1 | 208 | 1 | 209 | 1.40E-106 | 395.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017305.t1 | C6TCJ2 | 67.9 | 209 | 62 | 3 | 1 | 208 | 2 | 206 | 1.1e-70 | 267.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017305.t1 | G7KFQ6 | 98.6 | 209 | 2 | 1 | 1 | 208 | 1 | 209 | 1.0e-106 | 395.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene017305 | MS.gene065728 | PPI |
| MS.gene81774 | MS.gene017305 | PPI |
| MS.gene056924 | MS.gene017305 | PPI |
| MS.gene017305 | MS.gene81771 | PPI |
| MS.gene017305 | MS.gene056922 | PPI |
| MS.gene017305 | MS.gene056923 | PPI |
| MS.gene017305 | MS.gene81770 | PPI |
| MS.gene034840 | MS.gene017305 | PPI |
| MS.gene017305 | MS.gene065724 | PPI |
| MS.gene034836 | MS.gene017305 | PPI |
| MS.gene017305 | MS.gene056925 | PPI |
| MS.gene017305 | MS.gene034839 | PPI |
| MS.gene034838 | MS.gene017305 | PPI |
| MS.gene017305 | MS.gene056920 | PPI |
| MS.gene065729 | MS.gene017305 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017305.t1 | MTR_5g076480 | 98.565 | 209 | 2 | 1 | 1 | 208 | 1 | 209 | 1.00e-149 | 414 |
| MS.gene017305.t1 | MTR_3g064310 | 61.751 | 217 | 73 | 5 | 1 | 208 | 2 | 217 | 2.51e-87 | 256 |
| MS.gene017305.t1 | MTR_0160s0040 | 34.682 | 173 | 109 | 3 | 22 | 192 | 6 | 176 | 1.81e-34 | 121 |
| MS.gene017305.t1 | MTR_2g026530 | 31.098 | 164 | 104 | 3 | 34 | 188 | 8 | 171 | 5.47e-19 | 80.9 |
| MS.gene017305.t1 | MTR_2g026530 | 31.098 | 164 | 104 | 3 | 34 | 188 | 28 | 191 | 1.17e-18 | 80.5 |
| MS.gene017305.t1 | MTR_4g081880 | 33.913 | 115 | 74 | 1 | 68 | 180 | 66 | 180 | 1.67e-13 | 66.6 |
| MS.gene017305.t1 | MTR_7g011090 | 27.778 | 180 | 120 | 4 | 11 | 181 | 2 | 180 | 9.95e-13 | 64.3 |
| MS.gene017305.t1 | MTR_0004s0210 | 27.815 | 151 | 98 | 4 | 35 | 180 | 6 | 150 | 1.19e-11 | 60.8 |
| MS.gene017305.t1 | MTR_0693s0030 | 28.358 | 134 | 86 | 2 | 70 | 194 | 46 | 178 | 1.26e-11 | 61.2 |
| MS.gene017305.t1 | MTR_7g083120 | 23.030 | 165 | 120 | 2 | 29 | 186 | 22 | 186 | 3.76e-11 | 60.1 |
| MS.gene017305.t1 | MTR_5g041900 | 31.579 | 114 | 76 | 1 | 70 | 181 | 67 | 180 | 6.36e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017305.t1 | AT1G17200 | 59.444 | 180 | 70 | 3 | 29 | 206 | 24 | 202 | 2.13e-70 | 213 |
| MS.gene017305.t1 | AT3G14380 | 54.839 | 155 | 69 | 1 | 38 | 191 | 24 | 178 | 7.63e-50 | 160 |
| MS.gene017305.t1 | AT1G17200 | 54.128 | 109 | 48 | 2 | 99 | 206 | 1 | 108 | 8.04e-34 | 117 |
| MS.gene017305.t1 | AT5G54980 | 32.934 | 167 | 109 | 2 | 34 | 199 | 29 | 193 | 1.16e-22 | 90.9 |
| MS.gene017305.t1 | AT4G16442 | 29.480 | 173 | 113 | 3 | 34 | 197 | 8 | 180 | 2.78e-16 | 73.9 |
| MS.gene017305.t1 | AT2G35760 | 26.471 | 204 | 133 | 4 | 4 | 198 | 5 | 200 | 1.23e-14 | 69.7 |
| MS.gene017305.t1 | AT1G03700 | 28.105 | 153 | 99 | 4 | 41 | 188 | 13 | 159 | 6.53e-13 | 64.3 |
| MS.gene017305.t1 | AT1G14160 | 33.613 | 119 | 77 | 1 | 68 | 184 | 88 | 206 | 2.92e-11 | 60.8 |
| MS.gene017305.t1 | AT2G27370 | 30.769 | 117 | 79 | 1 | 70 | 184 | 101 | 217 | 8.01e-11 | 59.7 |
Find 43 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTGATCTTGGTGCTTTC+AGG | 0.132194 | 5.1:-59360629 | MS.gene017305:intron |
| TTTCACTCATATCCTCTTAT+AGG | 0.157418 | 5.1:-59359203 | MS.gene017305:CDS |
| GTTCTATACCTTGCTGAATA+TGG | 0.284110 | 5.1:-59359336 | MS.gene017305:CDS |
| TCTGTTGCCTATTCTGATCT+TGG | 0.296237 | 5.1:-59360639 | MS.gene017305:CDS |
| TACAAGATCTTCCATTGAAA+TGG | 0.311295 | 5.1:-59360808 | MS.gene017305:CDS |
| TTGGAGTTGTTGAATTCTGC+TGG | 0.383005 | 5.1:+59359159 | None:intergenic |
| AGTTCAGCTTGTGGATCTTT+CGG | 0.384816 | 5.1:-59359294 | MS.gene017305:CDS |
| AATAACATGGACAAGGGAAT+TGG | 0.407691 | 5.1:-59360843 | None:intergenic |
| TACTGAATTTCCCATTTCAA+TGG | 0.408880 | 5.1:+59360797 | None:intergenic |
| GCTGTTACACATAAACAAAT+AGG | 0.414973 | 5.1:+59360705 | None:intergenic |
| TTCAACCATGCCTAAAGCTT+GGG | 0.418349 | 5.1:-59359735 | MS.gene017305:CDS |
| AATTCTGAGGAAAATGAGTA+TGG | 0.430525 | 5.1:-59360663 | MS.gene017305:CDS |
| TTTAGGCATGGTTGAAGGGC+GGG | 0.434561 | 5.1:+59359742 | None:intergenic |
| ACTAGCATTGCTGCTTTCAA+TGG | 0.434764 | 5.1:-59359129 | MS.gene017305:CDS |
| GTAGTTGATGAAGAATTTGA+AGG | 0.438687 | 5.1:-59360777 | MS.gene017305:CDS |
| CTTGCTAAATAGCCTATAAG+AGG | 0.450822 | 5.1:+59359191 | None:intergenic |
| CAAGCTTTAGGCATGGTTGA+AGG | 0.458787 | 5.1:+59359737 | None:intergenic |
| AGCTTCATTGCTACGTATTG+TGG | 0.458863 | 5.1:-59360748 | MS.gene017305:CDS |
| ACAAGATCTTCCATTGAAAT+GGG | 0.467090 | 5.1:-59360807 | MS.gene017305:CDS |
| CTTCAACCATGCCTAAAGCT+TGG | 0.474197 | 5.1:-59359736 | MS.gene017305:CDS |
| GAAAGCACCAAGATCAGAAT+AGG | 0.484914 | 5.1:+59360632 | None:intergenic |
| TTAGGCATGGTTGAAGGGCG+GGG | 0.491925 | 5.1:+59359743 | None:intergenic |
| ACCTACATAATCCTAGCTGC+TGG | 0.505252 | 5.1:-59359375 | MS.gene017305:CDS |
| AGCAATGCTAGTGTCCTTGT+TGG | 0.535463 | 5.1:+59359140 | None:intergenic |
| CATGCCAATGGTATTTGTGC+AGG | 0.554512 | 5.1:-59359800 | MS.gene017305:CDS |
| CATTATGCTTAAGAATTCTG+AGG | 0.555673 | 5.1:-59360676 | MS.gene017305:CDS |
| AAGCTTTAGGCATGGTTGAA+GGG | 0.558350 | 5.1:+59359738 | None:intergenic |
| GAATATGGAGTCCCTACTGC+AGG | 0.568100 | 5.1:-59359321 | MS.gene017305:CDS |
| GCTGAACTCCATCCTGCAGT+AGG | 0.577795 | 5.1:+59359309 | None:intergenic |
| CTTTAGGCATGGTTGAAGGG+CGG | 0.580747 | 5.1:+59359741 | None:intergenic |
| TCCAGCAGCTAGGATTATGT+AGG | 0.582929 | 5.1:+59359374 | None:intergenic |
| CTGAACTCCATCCTGCAGTA+GGG | 0.588006 | 5.1:+59359310 | None:intergenic |
| AGGTATTTGGTGCATGCCAA+TGG | 0.592552 | 5.1:-59359812 | MS.gene017305:CDS |
| TTAATACAGCTCCAGCAGCT+AGG | 0.598816 | 5.1:+59359364 | None:intergenic |
| ATATCCTGCACAAATACCAT+TGG | 0.600027 | 5.1:+59359796 | None:intergenic |
| GCAGGATGGAGTTCAGCTTG+TGG | 0.603477 | 5.1:-59359303 | MS.gene017305:CDS |
| ATGGAGTCCCTACTGCAGGA+TGG | 0.616514 | 5.1:-59359317 | MS.gene017305:CDS |
| CACAATAATAACATGGACAA+GGG | 0.617085 | 5.1:-59360849 | None:intergenic |
| GAAAGCCCAAGCTTTAGGCA+TGG | 0.618694 | 5.1:+59359730 | None:intergenic |
| GCACAATAATAACATGGACA+AGG | 0.662151 | 5.1:-59360850 | None:intergenic |
| AGAATTCAACAACTCCAACA+AGG | 0.667173 | 5.1:-59359154 | MS.gene017305:CDS |
| TAGGGACTCCATATTCAGCA+AGG | 0.672967 | 5.1:+59359328 | None:intergenic |
| TGCTGGAGCTGTATTAACAG+AGG | 0.687633 | 5.1:-59359358 | MS.gene017305:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATGATATTGAATGAT+TGG | + | chr5.1:59360452-59360471 | None:intergenic | 15.0% |
| !! | TTTCAAAGAAATAATTTGAT+TGG | - | chr5.1:59359671-59359690 | MS.gene017305:intron | 15.0% |
| !!! | TTAAACAAATTTTATCTAGA+GGG | + | chr5.1:59359789-59359808 | None:intergenic | 15.0% |
| !!! | TTTAAACAAATTTTATCTAG+AGG | + | chr5.1:59359790-59359809 | None:intergenic | 15.0% |
| !!! | TTTTTTTCATCTACTTAAAT+TGG | - | chr5.1:59359410-59359429 | MS.gene017305:intron | 15.0% |
| !! | ACAAAACAAAATAACTAGTT+AGG | - | chr5.1:59360025-59360044 | MS.gene017305:intron | 20.0% |
| !! | GAATAATATCCTTATGTTTA+TGG | + | chr5.1:59359438-59359457 | None:intergenic | 20.0% |
| !!! | AATTGAAGTACTTATCAATA+TGG | + | chr5.1:59360322-59360341 | None:intergenic | 20.0% |
| !!! | GAATTATGTTTTACATCAAT+AGG | - | chr5.1:59359903-59359922 | MS.gene017305:intron | 20.0% |
| ! | AAATTGGATCCATAAACATA+AGG | - | chr5.1:59359426-59359445 | MS.gene017305:intron | 25.0% |
| ! | AGAAACTAGTTAAATTGAGT+TGG | + | chr5.1:59359612-59359631 | None:intergenic | 25.0% |
| ! | TACTTCAATTTAATGTGTGA+TGG | - | chr5.1:59360332-59360351 | MS.gene017305:intron | 25.0% |
| ! | TAGGATATATCAAACACAAA+TGG | + | chr5.1:59360558-59360577 | None:intergenic | 25.0% |
| ! | TCCAAACACTAAAATAAGTT+TGG | + | chr5.1:59360117-59360136 | None:intergenic | 25.0% |
| ! | TCTTAAATTCTTAGATACCT+TGG | - | chr5.1:59359755-59359774 | MS.gene017305:CDS | 25.0% |
| ! | TTGTGTTTGATATATCCTAT+AGG | - | chr5.1:59360559-59360578 | MS.gene017305:intron | 25.0% |
| !! | TTTTGCATATTGTAGGTATT+TGG | - | chr5.1:59360137-59360156 | MS.gene017305:intron | 25.0% |
| !!! | AATTTTGCACCTTATTTCAA+AGG | + | chr5.1:59359586-59359605 | None:intergenic | 25.0% |
| !!! | ACCAAACTTATTTTAGTGTT+TGG | - | chr5.1:59360113-59360132 | MS.gene017305:intron | 25.0% |
| !!! | TATTCAATTGTTTTGAGCTA+AGG | - | chr5.1:59359453-59359472 | MS.gene017305:intron | 25.0% |
| !!! | TTTGACTAACCTTTGAAATA+AGG | - | chr5.1:59359574-59359593 | MS.gene017305:intron | 25.0% |
| AATTTGGCAAACTTCATTGA+TGG | + | chr5.1:59359365-59359384 | None:intergenic | 30.0% | |
| ACAAGATCTTCCATTGAAAT+GGG | - | chr5.1:59359155-59359174 | MS.gene017305:CDS | 30.0% | |
| ATATTGAATGATTGGATGAG+GGG | + | chr5.1:59360444-59360463 | None:intergenic | 30.0% | |
| ATTCTTAGATACCTTGGTAT+CGG | - | chr5.1:59359761-59359780 | MS.gene017305:CDS | 30.0% | |
| CATTATGCTTAAGAATTCTG+AGG | - | chr5.1:59359286-59359305 | MS.gene017305:CDS | 30.0% | |
| CTGCAATATATTTCATGTCT+GGG | + | chr5.1:59360083-59360102 | None:intergenic | 30.0% | |
| GAGCAAGTAAAACAATAGTT+AGG | - | chr5.1:59360000-59360019 | MS.gene017305:intron | 30.0% | |
| GATATTGAATGATTGGATGA+GGG | + | chr5.1:59360445-59360464 | None:intergenic | 30.0% | |
| GCTGTTACACATAAACAAAT+AGG | + | chr5.1:59359260-59359279 | None:intergenic | 30.0% | |
| GTTAGAAATGAAAACTCACT+TGG | - | chr5.1:59359520-59359539 | MS.gene017305:intron | 30.0% | |
| GTTGATTGTTGAGATTCAAT+TGG | - | chr5.1:59359715-59359734 | MS.gene017305:CDS | 30.0% | |
| TACAAGATCTTCCATTGAAA+TGG | - | chr5.1:59359154-59359173 | MS.gene017305:CDS | 30.0% | |
| TACTGAATTTCCCATTTCAA+TGG | + | chr5.1:59359168-59359187 | None:intergenic | 30.0% | |
| TGATATTGAATGATTGGATG+AGG | + | chr5.1:59360446-59360465 | None:intergenic | 30.0% | |
| TGCAATATATTTCATGTCTG+GGG | + | chr5.1:59360082-59360101 | None:intergenic | 30.0% | |
| TTTCACTCATATCCTCTTAT+AGG | - | chr5.1:59360759-59360778 | MS.gene017305:CDS | 30.0% | |
| TTTCTAACATTGAGTGATTG+AGG | - | chr5.1:59359627-59359646 | MS.gene017305:intron | 30.0% | |
| ! | AATTCTGAGGAAAATGAGTA+TGG | - | chr5.1:59359299-59359318 | MS.gene017305:CDS | 30.0% |
| ! | GTTTGGATTTTGCATATTGT+AGG | - | chr5.1:59360130-59360149 | MS.gene017305:intron | 30.0% |
| !! | GTAGTTGATGAAGAATTTGA+AGG | - | chr5.1:59359185-59359204 | MS.gene017305:CDS | 30.0% |
| !!! | ATTGTTTTGAGCTAAGGTTT+TGG | - | chr5.1:59359459-59359478 | MS.gene017305:intron | 30.0% |
| AAAAAGAAAGCCCAAGCTTT+AGG | + | chr5.1:59360240-59360259 | None:intergenic | 35.0% | |
| AGAATTCAACAACTCCAACA+AGG | - | chr5.1:59360808-59360827 | MS.gene017305:CDS | 35.0% | |
| ATATCCTGCACAAATACCAT+TGG | + | chr5.1:59360169-59360188 | None:intergenic | 35.0% | |
| CTTGCTAAATAGCCTATAAG+AGG | + | chr5.1:59360774-59360793 | None:intergenic | 35.0% | |
| CTTGCTCTATGTTTCTTTGA+TGG | + | chr5.1:59359987-59360006 | None:intergenic | 35.0% | |
| GAAAAGGATAGATATTGACC+TGG | + | chr5.1:59360269-59360288 | None:intergenic | 35.0% | |
| GCAATATATTTCATGTCTGG+GGG | + | chr5.1:59360081-59360100 | None:intergenic | 35.0% | |
| GCTGCAATATATTTCATGTC+TGG | + | chr5.1:59360084-59360103 | None:intergenic | 35.0% | |
| GTTCTATACCTTGCTGAATA+TGG | - | chr5.1:59360626-59360645 | MS.gene017305:intron | 35.0% | |
| TTATGTAGGTTTGCACCTAT+AGG | + | chr5.1:59360577-59360596 | None:intergenic | 35.0% | |
| ! | CTATCCTTTTCTTGAATGAG+AGG | - | chr5.1:59360278-59360297 | MS.gene017305:intron | 35.0% |
| ! | CTCTATGTTTCTTTGATGGT+TGG | + | chr5.1:59359983-59360002 | None:intergenic | 35.0% |
| ACAACATCACCCAAAGAGTT+TGG | - | chr5.1:59360407-59360426 | MS.gene017305:intron | 40.0% | |
| ACTTGGTCATTTGATAGAGG+AGG | - | chr5.1:59359537-59359556 | MS.gene017305:intron | 40.0% | |
| AGCTTCATTGCTACGTATTG+TGG | - | chr5.1:59359214-59359233 | MS.gene017305:CDS | 40.0% | |
| AGTTCAGCTTGTGGATCTTT+CGG | - | chr5.1:59360668-59360687 | MS.gene017305:CDS | 40.0% | |
| ATCACCCAAAGAGTTTGGTT+GGG | - | chr5.1:59360412-59360431 | MS.gene017305:intron | 40.0% | |
| CAGTCCTCTCATTCAAGAAA+AGG | + | chr5.1:59360285-59360304 | None:intergenic | 40.0% | |
| CTCACTTGGTCATTTGATAG+AGG | - | chr5.1:59359534-59359553 | MS.gene017305:intron | 40.0% | |
| CTTGGTCATTTGATAGAGGA+GGG | - | chr5.1:59359538-59359557 | MS.gene017305:intron | 40.0% | |
| GAGTGATTGAGGAGATTTGA+AGG | - | chr5.1:59359638-59359657 | MS.gene017305:intron | 40.0% | |
| TCTGTTGCCTATTCTGATCT+TGG | - | chr5.1:59359323-59359342 | MS.gene017305:CDS | 40.0% | |
| TTCAACCATGCCTAAAGCTT+GGG | - | chr5.1:59360227-59360246 | MS.gene017305:intron | 40.0% | |
| TTGGAGTTGTTGAATTCTGC+TGG | + | chr5.1:59360806-59360825 | None:intergenic | 40.0% | |
| !! | AAGCTTTAGGCATGGTTGAA+GGG | + | chr5.1:59360227-59360246 | None:intergenic | 40.0% |
| !! | ACTAGCATTGCTGCTTTCAA+TGG | - | chr5.1:59360833-59360852 | MS.gene017305:CDS | 40.0% |
| !! | ATTCTGATCTTGGTGCTTTC+AGG | - | chr5.1:59359333-59359352 | MS.gene017305:CDS | 40.0% |
| !! | GAAAGCACCAAGATCAGAAT+AGG | + | chr5.1:59359333-59359352 | None:intergenic | 40.0% |
| ACCTACATAATCCTAGCTGC+TGG | - | chr5.1:59360587-59360606 | MS.gene017305:intron | 45.0% | |
| ACCTACCCAACCAAACTCTT+TGG | + | chr5.1:59360420-59360439 | None:intergenic | 45.0% | |
| AGCAATGCTAGTGTCCTTGT+TGG | + | chr5.1:59360825-59360844 | None:intergenic | 45.0% | |
| CATCACCCAAAGAGTTTGGT+TGG | - | chr5.1:59360411-59360430 | MS.gene017305:intron | 45.0% | |
| CATGCCAATGGTATTTGTGC+AGG | - | chr5.1:59360162-59360181 | MS.gene017305:intron | 45.0% | |
| CCTACCCAACCAAACTCTTT+GGG | + | chr5.1:59360419-59360438 | None:intergenic | 45.0% | |
| CTTCAACCATGCCTAAAGCT+TGG | - | chr5.1:59360226-59360245 | MS.gene017305:intron | 45.0% | |
| TAGGGACTCCATATTCAGCA+AGG | + | chr5.1:59360637-59360656 | None:intergenic | 45.0% | |
| TCCAGCAGCTAGGATTATGT+AGG | + | chr5.1:59360591-59360610 | None:intergenic | 45.0% | |
| TGCTGGAGCTGTATTAACAG+AGG | - | chr5.1:59360604-59360623 | MS.gene017305:intron | 45.0% | |
| TTAATACAGCTCCAGCAGCT+AGG | + | chr5.1:59360601-59360620 | None:intergenic | 45.0% | |
| ! | GATACAAGAAGTGCAAGACG+AGG | - | chr5.1:59359925-59359944 | MS.gene017305:intron | 45.0% |
| ! | GGCTTTCTTTTTGCTTGACC+AGG | - | chr5.1:59360248-59360267 | MS.gene017305:intron | 45.0% |
| !! | AGGTATTTGGTGCATGCCAA+TGG | - | chr5.1:59360150-59360169 | MS.gene017305:intron | 45.0% |
| !! | CAAGCTTTAGGCATGGTTGA+AGG | + | chr5.1:59360228-59360247 | None:intergenic | 45.0% |
| !! | ATTATTAAAACTATAAAATT+TGG | + | chr5.1:59359381-59359400 | None:intergenic | 5.0% |
| CCCAAAGAGTTTGGTTGGGT+AGG | - | chr5.1:59360416-59360435 | MS.gene017305:intron | 50.0% | |
| CTGAACTCCATCCTGCAGTA+GGG | + | chr5.1:59360655-59360674 | None:intergenic | 50.0% | |
| CTTTAGGCATGGTTGAAGGG+CGG | + | chr5.1:59360224-59360243 | None:intergenic | 50.0% | |
| GAATATGGAGTCCCTACTGC+AGG | - | chr5.1:59360641-59360660 | MS.gene017305:CDS | 50.0% | |
| TTTAGGCATGGTTGAAGGGC+GGG | + | chr5.1:59360223-59360242 | None:intergenic | 50.0% | |
| !! | GAAAGCCCAAGCTTTAGGCA+TGG | + | chr5.1:59360235-59360254 | None:intergenic | 50.0% |
| !! | TCTAGAGGGTACCGATACCA+AGG | + | chr5.1:59359775-59359794 | None:intergenic | 50.0% |
| ATGGAGTCCCTACTGCAGGA+TGG | - | chr5.1:59360645-59360664 | MS.gene017305:CDS | 55.0% | |
| GCAGGATGGAGTTCAGCTTG+TGG | - | chr5.1:59360659-59360678 | MS.gene017305:CDS | 55.0% | |
| GCTGAACTCCATCCTGCAGT+AGG | + | chr5.1:59360656-59360675 | None:intergenic | 55.0% | |
| TTAGGCATGGTTGAAGGGCG+GGG | + | chr5.1:59360222-59360241 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 59359125 | 59360859 | 59359125 | ID=MS.gene017305 |
| chr5.1 | mRNA | 59359125 | 59360859 | 59359125 | ID=MS.gene017305.t1;Parent=MS.gene017305 |
| chr5.1 | exon | 59360630 | 59360859 | 59360630 | ID=MS.gene017305.t1.exon1;Parent=MS.gene017305.t1 |
| chr5.1 | CDS | 59360630 | 59360859 | 59360630 | ID=cds.MS.gene017305.t1;Parent=MS.gene017305.t1 |
| chr5.1 | exon | 59359715 | 59359832 | 59359715 | ID=MS.gene017305.t1.exon2;Parent=MS.gene017305.t1 |
| chr5.1 | CDS | 59359715 | 59359832 | 59359715 | ID=cds.MS.gene017305.t1;Parent=MS.gene017305.t1 |
| chr5.1 | exon | 59359125 | 59359403 | 59359125 | ID=MS.gene017305.t1.exon3;Parent=MS.gene017305.t1 |
| chr5.1 | CDS | 59359125 | 59359403 | 59359125 | ID=cds.MS.gene017305.t1;Parent=MS.gene017305.t1 |
| Gene Sequence |
| Protein sequence |
