AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022542


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022542.t1 MTR_8g005990 96.907 291 9 0 1 291 88 378 0.0 588
MS.gene022542.t1 MTR_8g005990 96.907 291 9 0 1 291 111 401 0.0 587
MS.gene022542.t1 MTR_1g014040 68.729 291 90 1 2 291 119 409 1.03e-152 433
MS.gene022542.t1 MTR_3g046330 45.745 282 152 1 2 283 85 365 1.59e-87 266
MS.gene022542.t1 MTR_8g010580 48.571 280 143 1 7 285 91 370 1.65e-85 261
MS.gene022542.t1 MTR_8g010580 49.187 246 125 0 7 252 91 336 2.04e-76 236
MS.gene022542.t1 MTR_8g010580 48.707 232 119 0 7 238 91 322 2.83e-70 220
MS.gene022542.t1 MTR_8g103840 33.101 287 168 9 6 273 10 291 1.94e-37 134
MS.gene022542.t1 MTR_8g103840 32.872 289 170 9 4 273 24 307 1.98e-37 135
MS.gene022542.t1 MTR_8g103840 32.872 289 170 9 4 273 85 368 6.35e-37 135
MS.gene022542.t1 MTR_8g103840 33.101 287 168 9 6 273 124 405 1.55e-36 135
MS.gene022542.t1 MTR_8g103840 32.576 264 154 9 29 273 1 259 2.24e-30 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022542.t1 AT4G31810 65.862 290 96 1 5 291 120 409 7.07e-146 416
MS.gene022542.t1 AT3G60510 67.474 289 94 0 2 290 113 401 5.97e-144 410
MS.gene022542.t1 AT3G60510 62.102 314 94 1 2 290 113 426 2.23e-138 397
MS.gene022542.t1 AT5G65940 49.110 281 142 1 6 286 89 368 6.90e-97 290
MS.gene022542.t1 AT5G65940 49.110 281 142 1 6 286 89 368 6.90e-97 290
MS.gene022542.t1 AT3G60510 65.686 204 70 0 2 205 113 316 2.86e-93 279
MS.gene022542.t1 AT2G30650 48.057 283 145 1 6 286 85 367 4.99e-93 280
MS.gene022542.t1 AT2G30660 49.621 264 133 0 7 270 86 349 2.84e-92 278
MS.gene022542.t1 AT2G30660 49.621 264 133 0 7 270 54 317 3.02e-92 277
MS.gene022542.t1 AT5G65940 49.798 247 124 0 6 252 89 335 3.80e-86 261
MS.gene022542.t1 AT1G06550 42.199 282 163 0 2 283 85 366 6.37e-83 254
MS.gene022542.t1 AT5G65940 48.523 237 122 0 6 242 89 325 5.47e-80 245
MS.gene022542.t1 AT2G30650 48.101 237 123 0 6 242 85 321 4.91e-77 238
MS.gene022542.t1 AT4G13360 32.660 297 173 10 4 281 129 417 2.53e-42 150
MS.gene022542.t1 AT3G24360 32.082 293 172 10 6 277 24 310 1.15e-38 138
MS.gene022542.t1 AT3G24360 31.525 295 175 10 4 277 24 312 3.08e-38 137
MS.gene022542.t1 AT3G24360 31.741 293 173 10 6 277 3 289 3.54e-38 136
MS.gene022542.t1 AT3G24360 31.525 295 175 10 4 277 126 414 2.39e-37 137
MS.gene022542.t1 AT3G24360 31.741 293 173 10 6 277 124 410 2.83e-37 137
MS.gene022542.t1 AT3G24360 33.333 192 117 6 5 187 127 316 9.89e-20 88.2

Find 78 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCTTCTTTAAGTCTATTT+AGG 0.111977 8.4:+80767108 None:intergenic
GCGACCCCTGAAATTCTTAT+TGG 0.185040 8.4:-80770690 MS.gene022542:CDS
TGAAGAACAGCTTGGGAAAT+TGG 0.217628 8.4:-80769044 MS.gene022542:CDS
GCAATTTCTAAACAGATATC+TGG 0.230533 8.4:-80766873 MS.gene022542:CDS
TGAAATCCAATAAGAATTTC+AGG 0.232091 8.4:+80770684 None:intergenic
AGCTTCTTTAAGTCTATTTA+GGG 0.315411 8.4:+80767109 None:intergenic
CCAAGCTGTTCTTCAATTAG+TGG 0.321509 8.4:+80769052 None:intergenic
GGAAAAGGTTTCTCAAGATA+TGG 0.340105 8.4:-80766536 MS.gene022542:CDS
TCAGGTTCAAATTCAGTTAG+AGG 0.341063 8.4:+80766496 None:intergenic
GCAGTGGGATCCTCCAACTT+TGG 0.373532 8.4:-80766557 MS.gene022542:intron
TTTGTGGGTAACTCTAAATC+AGG 0.392416 8.4:+80766478 None:intergenic
GAAATTCTAGATAAATGCTT+TGG 0.392714 8.4:-80768645 MS.gene022542:CDS
ATTACCATGGGTGGTGGGGC+AGG 0.398663 8.4:-80771409 MS.gene022542:CDS
GGAGAGTACTTGGCTCTGAC+TGG 0.403299 8.4:-80769246 MS.gene022542:CDS
AGCTTCTCCATTGAGCTTGA+AGG 0.426243 8.4:-80767090 MS.gene022542:CDS
TGTAGTACACTACTGCGGCC+TGG 0.431132 8.4:+80768962 None:intergenic
CACTAATTGAAGAACAGCTT+GGG 0.439000 8.4:-80769051 MS.gene022542:CDS
CTCCAGGTAGCTCTTCTCAA+TGG 0.450877 8.4:-80771433 MS.gene022542:intron
AATGGCATTACCATGGGTGG+TGG 0.452416 8.4:-80771415 MS.gene022542:CDS
AGAAATGCACCATGCATCCT+TGG 0.460714 8.4:+80767133 None:intergenic
GAAACCACTTTAGAACAGTA+TGG 0.461406 8.4:-80768998 MS.gene022542:CDS
AAGGAAACCTTCAAGCTCAA+TGG 0.465743 8.4:+80767083 None:intergenic
CGCGCAACAAGCACTGATCA+AGG 0.466530 8.4:+80766916 None:intergenic
GGATCCTCCAACTTTGGAAA+AGG 0.471727 8.4:-80766551 MS.gene022542:CDS
GTAGTACACTACTGCGGCCT+GGG 0.475897 8.4:+80768963 None:intergenic
GTTGTATGCAGGAGAGTACT+TGG 0.476068 8.4:-80769256 MS.gene022542:intron
GGGGCAGGAATTTCAATCCC+TGG 0.494304 8.4:-80771394 MS.gene022542:CDS
CAATTTCTAAACAGATATCT+GGG 0.502985 8.4:-80766872 MS.gene022542:CDS
AGTGCTTGTTGCGCGAGTAC+CGG 0.503659 8.4:-80766908 MS.gene022542:CDS
AAATTGCTTGTAAAGTCATC+CGG 0.507974 8.4:+80766889 None:intergenic
GTTGCAAGTCGGAATGTCCC+AGG 0.508371 8.4:+80771376 None:intergenic
AAAGTGGTTTCTATGACAGA+TGG 0.510254 8.4:+80769010 None:intergenic
GAGAGTACTTGGCTCTGACT+GGG 0.511332 8.4:-80769245 MS.gene022542:CDS
CCACTAATTGAAGAACAGCT+TGG 0.512272 8.4:-80769052 MS.gene022542:CDS
ATGGCATTACCATGGGTGGT+GGG 0.515533 8.4:-80771414 MS.gene022542:CDS
ATCACCATACTGTTCTAAAG+TGG 0.531202 8.4:+80768994 None:intergenic
TGAAGAGATTGTTGATGCAT+TGG 0.532230 8.4:-80768610 MS.gene022542:intron
GAAATCCAATAAGAATTTCA+GGG 0.534007 8.4:+80770685 None:intergenic
CTCAATGGCATTACCATGGG+TGG 0.535280 8.4:-80771418 MS.gene022542:CDS
TTCCAATAGGAAGTTGCCGC+AGG 0.536254 8.4:-80767161 MS.gene022542:intron
GGGAGTGAGGGCACGTGTAG+TGG 0.536535 8.4:-80766756 MS.gene022542:CDS
AATTTCCTTATAGGGAGTGA+GGG 0.555093 8.4:-80766768 MS.gene022542:intron
AATTCCTGCCCCACCACCCA+TGG 0.559916 8.4:+80771405 None:intergenic
TGCATCCTTGGTTTCACCTG+CGG 0.562087 8.4:+80767145 None:intergenic
CAGGTGAAACCAAGGATGCA+TGG 0.564859 8.4:-80767142 MS.gene022542:CDS
GAATTTCCTTATAGGGAGTG+AGG 0.566187 8.4:-80766769 MS.gene022542:intron
CTTCTCAATGGCATTACCAT+GGG 0.568968 8.4:-80771421 MS.gene022542:CDS
GGGCAGGAATTTCAATCCCT+GGG 0.570054 8.4:-80771393 MS.gene022542:CDS
TGGCATTACCATGGGTGGTG+GGG 0.573172 8.4:-80771413 MS.gene022542:CDS
ACGTGTAGTGGACAAGGACA+TGG 0.574921 8.4:-80766744 MS.gene022542:CDS
AAAGGAACTCACAGATCTCA+AGG 0.582810 8.4:+80767064 None:intergenic
AAAGCTCAACGGAGTAGAGA+TGG 0.584222 8.4:-80769220 MS.gene022542:CDS
TTCTATGACAGATGGGTCGT+CGG 0.588045 8.4:+80769018 None:intergenic
CAATCTCTTCAACTGTGTCA+TGG 0.589006 8.4:+80768622 None:intergenic
TCTTCTCAATGGCATTACCA+TGG 0.598018 8.4:-80771422 MS.gene022542:CDS
AAGTGGTTTCTATGACAGAT+GGG 0.600276 8.4:+80769011 None:intergenic
AAAGGTTTCTCAAGATATGG+TGG 0.602459 8.4:-80766533 MS.gene022542:CDS
GGACAAGGACATGGCCCCAA+AGG 0.605853 8.4:-80766735 MS.gene022542:intron
TGTGACCAGGTAGACGTGAA+AGG 0.610304 8.4:+80770637 None:intergenic
GCGCAACAAGCACTGATCAA+GGG 0.615691 8.4:+80766917 None:intergenic
TCACGTCTACCTGGTCACAT+AGG 0.617502 8.4:-80770633 MS.gene022542:intron
GGAGTAGAGATGGTTGCATG+TGG 0.628211 8.4:-80769210 MS.gene022542:CDS
AGAGTACTTGGCTCTGACTG+GGG 0.633308 8.4:-80769244 MS.gene022542:CDS
TTGCAAGTCGGAATGTCCCA+GGG 0.633890 8.4:+80771377 None:intergenic
GAGGGCACGTGTAGTGGACA+AGG 0.637439 8.4:-80766750 MS.gene022542:CDS
TATTTGGGATAGATACGAGA+AGG 0.644999 8.4:-80766951 MS.gene022542:intron
CTGACTGGGGAAAAGCTCAA+CGG 0.647916 8.4:-80769231 MS.gene022542:CDS
GCACATAAATGGTACCTTTG+GGG 0.649601 8.4:+80766721 None:intergenic
GAGTAGAGATGGTTGCATGT+GGG 0.656634 8.4:-80769209 MS.gene022542:CDS
AGTTGCCGCAGGTGAAACCA+AGG 0.659546 8.4:-80767150 MS.gene022542:CDS
AAATCCAATAAGAATTTCAG+GGG 0.668222 8.4:+80770686 None:intergenic
GCCGCAGTAGTGTACTACAA+AGG 0.697751 8.4:-80768958 MS.gene022542:intron
GCTTCAGATATGTACCAATG+AGG 0.698029 8.4:+80771559 None:intergenic
GATATCTGGGGACTTCTGTG+AGG 0.705454 8.4:-80766859 MS.gene022542:intron
TATGGTGATCTTGTACACCC+AGG 0.707552 8.4:-80768980 MS.gene022542:CDS
ATAATATTACCTATGTGACC+AGG 0.714051 8.4:+80770624 None:intergenic
AATTTCTAAACAGATATCTG+GGG 0.714068 8.4:-80766871 MS.gene022542:CDS
ACCTTTGTAGTACACTACTG+CGG 0.731986 8.4:+80768957 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATGAAAAAAGAAATA+GGG + chr8.4:80768922-80768941 None:intergenic 10.0%
!!! TGAATTTTTATATATAAACA+GGG + chr8.4:80771442-80771461 None:intergenic 10.0%
!!! TTGAATTTTTATATATAAAC+AGG + chr8.4:80771443-80771462 None:intergenic 10.0%
!! AAAAAAATAATGCACATAAA+TGG + chr8.4:80771355-80771374 None:intergenic 15.0%
!! AAAATTTGTAAATTGGAATT+TGG - chr8.4:80767193-80767212 MS.gene022542:intron 15.0%
!! ATAATGTAATCAATCTATTT+GGG - chr8.4:80771096-80771115 MS.gene022542:intron 15.0%
!! ATAATTTAGCATAAAAAAAC+AGG + chr8.4:80766595-80766614 None:intergenic 15.0%
!! GAATTAATGAAAAAAGAAAT+AGG + chr8.4:80768923-80768942 None:intergenic 15.0%
!! TATAATGTAATCAATCTATT+TGG - chr8.4:80771095-80771114 MS.gene022542:intron 15.0%
!! TCAATTATGTTAAAAATAAG+AGG + chr8.4:80768690-80768709 None:intergenic 15.0%
!! TGTTAATATCAAATCATAAA+TGG - chr8.4:80767155-80767174 MS.gene022542:CDS 15.0%
!!! AAAAAATCTTTGAAAGTTAA+GGG + chr8.4:80768037-80768056 None:intergenic 15.0%
!!! AATAATGATCATTTTTAAAG+AGG + chr8.4:80769267-80769286 None:intergenic 15.0%
!!! ATATTTTCCTATTTTTCATT+TGG + chr8.4:80769548-80769567 None:intergenic 15.0%
!!! ATCATTTTTAAATTTCCAAT+AGG - chr8.4:80770888-80770907 MS.gene022542:intron 15.0%
!!! TAAAAAATCTTTGAAAGTTA+AGG + chr8.4:80768038-80768057 None:intergenic 15.0%
!!! TTAACTTTCAAAGATTTTTT+AGG - chr8.4:80768037-80768056 MS.gene022542:intron 15.0%
!!! TTAATTTGAATTTCCTTATA+GGG - chr8.4:80771286-80771305 MS.gene022542:intron 15.0%
!!! TTTTCAGATTTAAAATTCAT+TGG - chr8.4:80771381-80771400 MS.gene022542:CDS 15.0%
!! AAAAAGAACAAAGCAATAAA+AGG + chr8.4:80768236-80768255 None:intergenic 20.0%
!! AATACTTGATGTGATAAATA+AGG + chr8.4:80768614-80768633 None:intergenic 20.0%
!! ATAAGCTTCTATATTACTAA+AGG + chr8.4:80766870-80766889 None:intergenic 20.0%
!! GGAACAAAAAATTTGTAAAT+TGG - chr8.4:80767186-80767205 MS.gene022542:intron 20.0%
!! GTTTGCTTAATTGTATTATT+GGG - chr8.4:80767010-80767029 MS.gene022542:intron 20.0%
!! TAGGTAAGTATATATATTTG+TGG - chr8.4:80770609-80770628 MS.gene022542:intron 20.0%
!! TATGAAATAATTGAGAATGA+TGG + chr8.4:80766553-80766572 None:intergenic 20.0%
!! TGTTTGCTTAATTGTATTAT+TGG - chr8.4:80767009-80767028 MS.gene022542:intron 20.0%
!! TTACAAGTTCATAGAATTAT+TGG - chr8.4:80768495-80768514 MS.gene022542:intron 20.0%
!!! AATTTATATCATTGCTGTTT+AGG + chr8.4:80768524-80768543 None:intergenic 20.0%
!!! ACAATATTTTGCTATAATCA+GGG - chr8.4:80768333-80768352 MS.gene022542:intron 20.0%
!!! ATTTATTTATACTTTTCTCC+AGG - chr8.4:80766613-80766632 MS.gene022542:intron 20.0%
!!! ATTTTAAAACCCCTAATTAT+TGG + chr8.4:80769743-80769762 None:intergenic 20.0%
!!! CAAGTTTTGACAATTTTATA+TGG - chr8.4:80767626-80767645 MS.gene022542:intron 20.0%
!!! GTTAATTTGAATTTCCTTAT+AGG - chr8.4:80771285-80771304 MS.gene022542:intron 20.0%
!!! TACAATATTTTGCTATAATC+AGG - chr8.4:80768332-80768351 MS.gene022542:intron 20.0%
!!! TAGAACAAAAAGATATGTTT+TGG - chr8.4:80770784-80770803 MS.gene022542:intron 20.0%
!!! TATACTTTTATATACCTCAT+TGG - chr8.4:80766489-80766508 MS.gene022542:CDS 20.0%
!!! TTGTCATATGTGATAATTTT+TGG - chr8.4:80770676-80770695 MS.gene022542:CDS 20.0%
!!! TTTCCTCTTTTGTTAATTTA+GGG + chr8.4:80769574-80769593 None:intergenic 20.0%
!!! TTTTTAGGAAAAATCTTATC+TGG - chr8.4:80768052-80768071 MS.gene022542:intron 20.0%
! AAACATGTTAAAGCTAACTT+TGG + chr8.4:80770453-80770472 None:intergenic 25.0%
! AAATCCAATAAGAATTTCAG+GGG + chr8.4:80767379-80767398 None:intergenic 25.0%
! AACAATTAACAAATACCCTT+AGG - chr8.4:80769506-80769525 MS.gene022542:intron 25.0%
! AAGCTTCTTTAAGTCTATTT+AGG + chr8.4:80770957-80770976 None:intergenic 25.0%
! AATTTCTAAACAGATATCTG+GGG - chr8.4:80771191-80771210 MS.gene022542:intron 25.0%
! ACAAATATAGAAAACGAAGA+GGG + chr8.4:80770176-80770195 None:intergenic 25.0%
! ACAGGTATAAAACGTAAATA+TGG + chr8.4:80767788-80767807 None:intergenic 25.0%
! AGAGATGAAAATTAGAAGAA+GGG + chr8.4:80768290-80768309 None:intergenic 25.0%
! AGCTTCTTTAAGTCTATTTA+GGG + chr8.4:80770956-80770975 None:intergenic 25.0%
! ATACATAAATAATGAGCAAG+AGG + chr8.4:80766738-80766757 None:intergenic 25.0%
! ATCAAATCATAAATGGAAAG+CGG - chr8.4:80767162-80767181 MS.gene022542:intron 25.0%
! ATGAACAAAATCAATCAAAG+TGG + chr8.4:80767719-80767738 None:intergenic 25.0%
! CAATTTCTAAACAGATATCT+GGG - chr8.4:80771190-80771209 MS.gene022542:intron 25.0%
! CTATAGGACAAAATAAAAGA+AGG + chr8.4:80768984-80769003 None:intergenic 25.0%
! CTATATTACTAAAGGTAATG+CGG + chr8.4:80766862-80766881 None:intergenic 25.0%
! GAAATCCAATAAGAATTTCA+GGG + chr8.4:80767380-80767399 None:intergenic 25.0%
! GAAATTCTAGATAAATGCTT+TGG - chr8.4:80769417-80769436 MS.gene022542:intron 25.0%
! GATATGCATTGTATAAATCT+TGG - chr8.4:80767300-80767319 MS.gene022542:intron 25.0%
! GTATAAACATTGTGAATTTC+TGG - chr8.4:80771225-80771244 MS.gene022542:intron 25.0%
! GTGAATTAAATATATGCAGT+GGG - chr8.4:80771490-80771509 MS.gene022542:intron 25.0%
! GTTCAACAACATCATAATTT+AGG + chr8.4:80770303-80770322 None:intergenic 25.0%
! TAAGTATATATATTTGTGGC+TGG - chr8.4:80770613-80770632 MS.gene022542:intron 25.0%
! TCATCAATTACATCTTCAAT+TGG + chr8.4:80768749-80768768 None:intergenic 25.0%
! TGAAATCCAATAAGAATTTC+AGG + chr8.4:80767381-80767400 None:intergenic 25.0%
! TGATGAAAGAATTGCTTAAT+AGG - chr8.4:80768660-80768679 MS.gene022542:intron 25.0%
! TGCAAAGAAGAAATTGTATT+AGG + chr8.4:80771407-80771426 None:intergenic 25.0%
! TGTGAATTAAATATATGCAG+TGG - chr8.4:80771489-80771508 MS.gene022542:intron 25.0%
! TGTTGTAAAAAATTGTTTGC+AGG + chr8.4:80766466-80766485 None:intergenic 25.0%
! TTTAAGAGTCCAATAATTAG+GGG - chr8.4:80769731-80769750 MS.gene022542:intron 25.0%
! TTTCCCTAAATTAACAAAAG+AGG - chr8.4:80769568-80769587 MS.gene022542:intron 25.0%
!! ATTGTTGTTATCTGTAAGTT+AGG - chr8.4:80766771-80766790 MS.gene022542:intron 25.0%
!! ATTTATGTATTTTCCTTTCG+TGG - chr8.4:80766748-80766767 MS.gene022542:CDS 25.0%
!! ATTTTGTAAAGAAGAGTTTG+TGG + chr8.4:80770208-80770227 None:intergenic 25.0%
!! CTATTTTCTTATCTTCTTTC+AGG + chr8.4:80769296-80769315 None:intergenic 25.0%
!! CTTTAAGAGTCCAATAATTA+GGG - chr8.4:80769730-80769749 MS.gene022542:intron 25.0%
!! CTTTCCTCTTTTGTTAATTT+AGG + chr8.4:80769575-80769594 None:intergenic 25.0%
!! TCATCATAGAATGATAGTTT+TGG - chr8.4:80767811-80767830 MS.gene022542:intron 25.0%
!! TCTTTAAGAGTCCAATAATT+AGG - chr8.4:80769729-80769748 MS.gene022542:intron 25.0%
!! TGATTGATGAGAAATTTTCA+TGG - chr8.4:80768707-80768726 MS.gene022542:intron 25.0%
!! TTAGTCTTTCTTTGTTTCAT+TGG - chr8.4:80768778-80768797 MS.gene022542:intron 25.0%
!!! AAAGTTAGCTTTAACATGTT+TGG - chr8.4:80770452-80770471 MS.gene022542:intron 25.0%
!!! AAGCCAAATAGAGAATTTTT+TGG - chr8.4:80770082-80770101 MS.gene022542:intron 25.0%
!!! AATTCTCTATTTGGCTTTTT+TGG + chr8.4:80770079-80770098 None:intergenic 25.0%
!!! ACTTTGATTGATTTTGTTCA+TGG - chr8.4:80767718-80767737 MS.gene022542:intron 25.0%
!!! AGCCAAATAGAGAATTTTTT+GGG - chr8.4:80770083-80770102 MS.gene022542:intron 25.0%
!!! ATTCTCTATTTGGCTTTTTT+GGG + chr8.4:80770078-80770097 None:intergenic 25.0%
!!! CAATATTTTGCTATAATCAG+GGG - chr8.4:80768334-80768353 MS.gene022542:intron 25.0%
!!! TAACTAGTTTGTCTTCATTT+TGG - chr8.4:80767273-80767292 MS.gene022542:intron 25.0%
!!! TCTAGTTTTCTACTTAACAT+AGG - chr8.4:80768388-80768407 MS.gene022542:intron 25.0%
!!! TCTTTGTTTTGATTTGAAGA+TGG + chr8.4:80769242-80769261 None:intergenic 25.0%
!!! TCTTTTATTTTGTCCTATAG+AGG - chr8.4:80768984-80769003 MS.gene022542:CDS 25.0%
!!! TTACTATGCTTTTAGAGTTT+AGG + chr8.4:80770558-80770577 None:intergenic 25.0%
!!! TTCTTTTTGTTTTCTGTTCA+CGG - chr8.4:80768248-80768267 MS.gene022542:intron 25.0%
AAACAAAGAAAGACTAACAG+AGG + chr8.4:80768775-80768794 None:intergenic 30.0%
AAATCAGATTGTTGAGATCT+GGG - chr8.4:80770335-80770354 MS.gene022542:intron 30.0%
AAATTGCTTGTAAAGTCATC+CGG + chr8.4:80771176-80771195 None:intergenic 30.0%
AATAGAGACTTCAATTTGAG+AGG - chr8.4:80770717-80770736 MS.gene022542:intron 30.0%
AATTACAGTTTAACCTAACG+TGG + chr8.4:80769611-80769630 None:intergenic 30.0%
ACAAAGCAATAAAAGGAACT+AGG + chr8.4:80768229-80768248 None:intergenic 30.0%
AGGTGATGTGTTAGTAAAAA+AGG + chr8.4:80770125-80770144 None:intergenic 30.0%
AGTGATCAGTTCATTTAAAC+TGG - chr8.4:80767865-80767884 MS.gene022542:intron 30.0%
AGTTTCAACAACAGTAGAAT+TGG + chr8.4:80770513-80770532 None:intergenic 30.0%
ATAATATTACCTATGTGACC+AGG + chr8.4:80767441-80767460 None:intergenic 30.0%
ATAGCATATCTGCTTCTAAA+CGG + chr8.4:80769800-80769819 None:intergenic 30.0%
ATAGTTAGTATACTCACATG+CGG + chr8.4:80766528-80766547 None:intergenic 30.0%
ATCATTCTATGATGAAGAAC+AGG + chr8.4:80767806-80767825 None:intergenic 30.0%
ATGATGTTGTTGAACATTAC+AGG - chr8.4:80770308-80770327 MS.gene022542:intron 30.0%
CAAATATAGAAAACGAAGAG+GGG + chr8.4:80770175-80770194 None:intergenic 30.0%
CTTAAGGTTAGTGTTAGTTA+TGG - chr8.4:80768360-80768379 MS.gene022542:intron 30.0%
GAAAAGAAGAGAAAGAAAAC+AGG + chr8.4:80771054-80771073 None:intergenic 30.0%
GAAGACAAACTAGTTAAACT+AGG + chr8.4:80767269-80767288 None:intergenic 30.0%
GACAAATATAGAAAACGAAG+AGG + chr8.4:80770177-80770196 None:intergenic 30.0%
GAGAGATGAAAATTAGAAGA+AGG + chr8.4:80768291-80768310 None:intergenic 30.0%
GATTACATTATAGAAGCAGT+TGG + chr8.4:80771087-80771106 None:intergenic 30.0%
GCAATTTCTAAACAGATATC+TGG - chr8.4:80771189-80771208 MS.gene022542:intron 30.0%
GGTGATGTGTTAGTAAAAAA+GGG + chr8.4:80770124-80770143 None:intergenic 30.0%
GTAATTTCAGTTGACAATCA+GGG - chr8.4:80770001-80770020 MS.gene022542:intron 30.0%
GTGATAAGTTATAGCTAAGT+CGG + chr8.4:80767335-80767354 None:intergenic 30.0%
GTGATCAGTTCATTTAAACT+GGG - chr8.4:80767866-80767885 MS.gene022542:intron 30.0%
GTGATTTCAGAATATGTTAG+TGG - chr8.4:80766805-80766824 MS.gene022542:intron 30.0%
GTTAAAGCTAACTTTGGATA+TGG + chr8.4:80770447-80770466 None:intergenic 30.0%
TAATTTCAGTTGACAATCAG+GGG - chr8.4:80770002-80770021 MS.gene022542:intron 30.0%
TATAATCCAAAGTCCTACAT+CGG + chr8.4:80766916-80766935 None:intergenic 30.0%
TATGTGTTGTGACTTACATT+TGG - chr8.4:80770835-80770854 MS.gene022542:intron 30.0%
TCACAACACATACAAAAGAA+AGG + chr8.4:80770827-80770846 None:intergenic 30.0%
TCCCTCTTTAGCAAAATTTA+GGG + chr8.4:80769636-80769655 None:intergenic 30.0%
TGAAAATTAGAAGAAGGGAA+AGG + chr8.4:80768285-80768304 None:intergenic 30.0%
TGATGTTGTTGAACATTACA+GGG - chr8.4:80770309-80770328 MS.gene022542:intron 30.0%
TGATTTGAAGATGGAAAGAA+AGG + chr8.4:80769233-80769252 None:intergenic 30.0%
TGCCCAAAAAATTCTCTATT+TGG + chr8.4:80770088-80770107 None:intergenic 30.0%
TGTAATTTCAGTTGACAATC+AGG - chr8.4:80770000-80770019 MS.gene022542:intron 30.0%
TGTAGGACTTTGGATTATAT+AGG - chr8.4:80766917-80766936 MS.gene022542:CDS 30.0%
TTATCTGTAAGTTAGGACTT+AGG - chr8.4:80766778-80766797 MS.gene022542:intron 30.0%
TTCCCTCTTTAGCAAAATTT+AGG + chr8.4:80769637-80769656 None:intergenic 30.0%
TTGAATAAAATGCTCAGAGA+AGG + chr8.4:80768013-80768032 None:intergenic 30.0%
TTGTAAATTGGAATTTGGAG+TGG - chr8.4:80767198-80767217 MS.gene022542:intron 30.0%
! ACCCTAAATTTTGCTAAAGA+GGG - chr8.4:80769632-80769651 MS.gene022542:intron 30.0%
! ATTACAACTAAGAGCTTTAG+TGG + chr8.4:80769842-80769861 None:intergenic 30.0%
! CAACACATTTCTGCATTTTT+AGG - chr8.4:80768112-80768131 MS.gene022542:intron 30.0%
! CTTTAACTTAAAGCAGAAGA+TGG + chr8.4:80767485-80767504 None:intergenic 30.0%
! GCTTTTGCCAAATGAAAAAT+AGG - chr8.4:80769538-80769557 MS.gene022542:intron 30.0%
! GTTTTCTACTTAACATAGGT+TGG - chr8.4:80768392-80768411 MS.gene022542:intron 30.0%
! TACCCTAAATTTTGCTAAAG+AGG - chr8.4:80769631-80769650 MS.gene022542:intron 30.0%
!! AAGAGTCTTATTGGTACAAT+CGG - chr8.4:80767741-80767760 MS.gene022542:intron 30.0%
!! CAAGTCATAGTCTTGTAAAA+AGG + chr8.4:80767939-80767958 None:intergenic 30.0%
!! CTAAATTTTGAAGATTGACC+CGG + chr8.4:80768434-80768453 None:intergenic 30.0%
!!! ATGATAGTTTTGGCATTGTT+AGG - chr8.4:80767821-80767840 MS.gene022542:intron 30.0%
!!! GCTTCTACTTTTTTCTTTTC+AGG - chr8.4:80769391-80769410 MS.gene022542:intron 30.0%
!!! TAACTTATCACCTTTTTTGC+AGG - chr8.4:80767344-80767363 MS.gene022542:intron 30.0%
!!! TCTTTTTGTTTTCTGTTCAC+GGG - chr8.4:80768249-80768268 MS.gene022542:intron 30.0%
!!! TTCTCTATTTGGCTTTTTTG+GGG + chr8.4:80770077-80770096 None:intergenic 30.0%
AAAAGCTAATCAGTGCCTAA+GGG + chr8.4:80769524-80769543 None:intergenic 35.0%
AAAATTAGACCCAGGTAGAA+GGG - chr8.4:80769758-80769777 MS.gene022542:intron 35.0%
AAACTACACAAGTATGAGTG+TGG - chr8.4:80770528-80770547 MS.gene022542:intron 35.0%
AAAGGTTTCTCAAGATATGG+TGG - chr8.4:80771529-80771548 MS.gene022542:intron 35.0%
AAAGTGGTTTCTATGACAGA+TGG + chr8.4:80769055-80769074 None:intergenic 35.0%
AAATCATAAATGGAAAGCGG+TGG - chr8.4:80767165-80767184 MS.gene022542:intron 35.0%
AAGGTTAGTGTTAGTTATGG+TGG - chr8.4:80768363-80768382 MS.gene022542:intron 35.0%
AAGTGGTTTCTATGACAGAT+GGG + chr8.4:80769054-80769073 None:intergenic 35.0%
AATTCTTCTGGATTCCTCTA+TGG - chr8.4:80767982-80768001 MS.gene022542:intron 35.0%
AATTTCCTTATAGGGAGTGA+GGG - chr8.4:80771294-80771313 MS.gene022542:intron 35.0%
ACACATGTACTACTTTCGAT+AGG - chr8.4:80770590-80770609 MS.gene022542:intron 35.0%
AGACTTCAATTTGAGAGGAT+CGG - chr8.4:80770722-80770741 MS.gene022542:intron 35.0%
AGATAACAACAATCCACGAA+AGG + chr8.4:80766764-80766783 None:intergenic 35.0%
AGGAGAAGTCATCTATGTAA+AGG + chr8.4:80767099-80767118 None:intergenic 35.0%
ATAAGGCTGGATAATAGCAT+TGG + chr8.4:80768597-80768616 None:intergenic 35.0%
ATGCACATAAATGGTACCTT+TGG + chr8.4:80771346-80771365 None:intergenic 35.0%
ATGTGCTGTACAATTGTCAT+TGG + chr8.4:80766978-80766997 None:intergenic 35.0%
ATTAACATATATGTGCCAGC+TGG - chr8.4:80769871-80769890 MS.gene022542:intron 35.0%
CAAACTAGTTAAACTAGGAG+AGG + chr8.4:80767264-80767283 None:intergenic 35.0%
CAAATCAGATTGTTGAGATC+TGG - chr8.4:80770334-80770353 MS.gene022542:intron 35.0%
CAAGAGAAAGAGATGAAAGA+GGG + chr8.4:80768467-80768486 None:intergenic 35.0%
CACTAATTGAAGAACAGCTT+GGG - chr8.4:80769011-80769030 MS.gene022542:CDS 35.0%
CAGCTTGAATATGTGTAAGT+GGG - chr8.4:80769938-80769957 MS.gene022542:intron 35.0%
CTTGATGTGATAAATAAGGC+TGG + chr8.4:80768610-80768629 None:intergenic 35.0%
GACTTGTCTGAAAAAGAGTT+TGG - chr8.4:80767953-80767972 MS.gene022542:intron 35.0%
GATCTCTATGCACTTAAAGA+GGG - chr8.4:80767594-80767613 MS.gene022542:intron 35.0%
GATGTTGTTGAACATTACAG+GGG - chr8.4:80770310-80770329 MS.gene022542:intron 35.0%
GGAAAAGGTTTCTCAAGATA+TGG - chr8.4:80771526-80771545 MS.gene022542:intron 35.0%
GTTTAGAAGCAGATATGCTA+TGG - chr8.4:80769799-80769818 MS.gene022542:intron 35.0%
GTTTAGCGTCTATTTCGATA+TGG - chr8.4:80767060-80767079 MS.gene022542:intron 35.0%
TAAAATTAGACCCAGGTAGA+AGG - chr8.4:80769757-80769776 MS.gene022542:intron 35.0%
TAACTTAAAGCAGAAGATGG+AGG + chr8.4:80767482-80767501 None:intergenic 35.0%
TACCACTATCAACATTTGCT+TGG + chr8.4:80766949-80766968 None:intergenic 35.0%
TATTCAAGTCTAACCACGTT+AGG - chr8.4:80769595-80769614 MS.gene022542:intron 35.0%
TCACTTTATCTTTCCGATGT+AGG - chr8.4:80766900-80766919 MS.gene022542:CDS 35.0%
TCAGCTTGAATATGTGTAAG+TGG - chr8.4:80769937-80769956 MS.gene022542:intron 35.0%
TCAGGTTCAAATTCAGTTAG+AGG + chr8.4:80771569-80771588 None:intergenic 35.0%
TGAAGAGATTGTTGATGCAT+TGG - chr8.4:80769452-80769471 MS.gene022542:intron 35.0%
TGATCTCTATGCACTTAAAG+AGG - chr8.4:80767593-80767612 MS.gene022542:intron 35.0%
TGCACATAAATGGTACCTTT+GGG + chr8.4:80771345-80771364 None:intergenic 35.0%
TGCATAACATGTGATATCGA+TGG + chr8.4:80768574-80768593 None:intergenic 35.0%
TGGAATAGTTGTGCAATAAC+CGG - chr8.4:80768412-80768431 MS.gene022542:intron 35.0%
TGTAAAGAAGAGTTTGTGGT+AGG + chr8.4:80770204-80770223 None:intergenic 35.0%
TGTTCAATCCCTTTGCATAT+CGG + chr8.4:80768193-80768212 None:intergenic 35.0%
TTAGAAGAAGGGAAAGGATA+AGG + chr8.4:80768279-80768298 None:intergenic 35.0%
TTTGAGGAGGAAAAAAAACG+AGG + chr8.4:80770145-80770164 None:intergenic 35.0%
TTTGTGGGTAACTCTAAATC+AGG + chr8.4:80771587-80771606 None:intergenic 35.0%
! AGGCAATTCAAGTTCAGAAA+TGG - chr8.4:80768087-80768106 MS.gene022542:intron 35.0%
! GTTTGGAATCTGAATTCTTC+TGG - chr8.4:80767970-80767989 MS.gene022542:intron 35.0%
! TACCAAGCAAATGTTGATAG+TGG - chr8.4:80766944-80766963 MS.gene022542:intron 35.0%
! TATTTGGGATAGATACGAGA+AGG - chr8.4:80771111-80771130 MS.gene022542:intron 35.0%
! TGAGAAACCTTTTCCAAAGT+TGG + chr8.4:80771521-80771540 None:intergenic 35.0%
! TGTTCATGGAAGAGTCTTAT+TGG - chr8.4:80767732-80767751 MS.gene022542:intron 35.0%
! TTTGGATATGGCTTTGCTTT+GGG + chr8.4:80770435-80770454 None:intergenic 35.0%
!! ACATTTCTGCATTTTTAGGC+AGG - chr8.4:80768116-80768135 MS.gene022542:intron 35.0%
!! ACCTTTCTTTGGTGCTATAT+AGG - chr8.4:80768140-80768159 MS.gene022542:intron 35.0%
!! AGAGTCTTATTGGTACAATC+GGG - chr8.4:80767742-80767761 MS.gene022542:intron 35.0%
!! ATCACCATACTGTTCTAAAG+TGG + chr8.4:80769071-80769090 None:intergenic 35.0%
!! CCTTTCTTTGGTGCTATATA+GGG - chr8.4:80768141-80768160 MS.gene022542:intron 35.0%
!! GAAACCACTTTAGAACAGTA+TGG - chr8.4:80769064-80769083 MS.gene022542:intron 35.0%
!! TATTTTGCTATAATCAGGGG+TGG - chr8.4:80768337-80768356 MS.gene022542:intron 35.0%
!! TGGGAAAAGCATTATGTGTT+TGG - chr8.4:80767029-80767048 MS.gene022542:intron 35.0%
!!! AGATATGTTTTGGCTTCTCT+TGG - chr8.4:80770794-80770813 MS.gene022542:intron 35.0%
!!! CTTTTTGTTTTCTGTTCACG+GGG - chr8.4:80768250-80768269 MS.gene022542:intron 35.0%
!!! TGCATAATGCATGCTTTTTC+TGG - chr8.4:80770367-80770386 MS.gene022542:intron 35.0%
AAAACAGGAGATTCGATACG+AGG + chr8.4:80766580-80766599 None:intergenic 40.0%
AAAGGAACTCACAGATCTCA+AGG + chr8.4:80771001-80771020 None:intergenic 40.0%
AAGAGAAAGACGGTAACTGA+GGG + chr8.4:80770253-80770272 None:intergenic 40.0%
AAGGAAACCTTCAAGCTCAA+TGG + chr8.4:80770982-80771001 None:intergenic 40.0%
ACATTATAGAAGCAGTTGGC+TGG + chr8.4:80771083-80771102 None:intergenic 40.0%
ACCTTTGTAGTACACTACTG+CGG + chr8.4:80769108-80769127 None:intergenic 40.0%
AGACAAACCCCATGTTTGTA+TGG + chr8.4:80770642-80770661 None:intergenic 40.0%
AGATGTTAATTATGGCCAGC+TGG + chr8.4:80769889-80769908 None:intergenic 40.0%
AGTCATCTCCGATATGCAAA+GGG - chr8.4:80768182-80768201 MS.gene022542:intron 40.0%
AGTCGACAGAATGTTCTCTT+TGG - chr8.4:80769330-80769349 MS.gene022542:intron 40.0%
ATACTTCCACTAGGCAATCA+GGG + chr8.4:80770049-80770068 None:intergenic 40.0%
ATATGCTATGGCTTACTAGC+TGG - chr8.4:80769811-80769830 MS.gene022542:intron 40.0%
ATCTTTCCGATGTAGGACTT+TGG - chr8.4:80766907-80766926 MS.gene022542:CDS 40.0%
CAAAAGCTAATCAGTGCCTA+AGG + chr8.4:80769525-80769544 None:intergenic 40.0%
CAATCTCTTCAACTGTGTCA+TGG + chr8.4:80769443-80769462 None:intergenic 40.0%
CAATTAGTGGAAGCCTCTAT+AGG + chr8.4:80769000-80769019 None:intergenic 40.0%
CACTCAAATATGGTGCAGAA+AGG + chr8.4:80767119-80767138 None:intergenic 40.0%
CCAAGCTGTTCTTCAATTAG+TGG + chr8.4:80769013-80769032 None:intergenic 40.0%
CCACTAATTGAAGAACAGCT+TGG - chr8.4:80769010-80769029 MS.gene022542:CDS 40.0%
CCCTATATAGCACCAAAGAA+AGG + chr8.4:80768144-80768163 None:intergenic 40.0%
CTAGACATCAGACAAGCAAA+AGG + chr8.4:80771019-80771038 None:intergenic 40.0%
CTGGTTTCCATACAAACATG+GGG - chr8.4:80770632-80770651 MS.gene022542:intron 40.0%
CTTCTCAATGGCATTACCAT+GGG - chr8.4:80766641-80766660 MS.gene022542:intron 40.0%
CTTTCTGCACCATATTTGAG+TGG - chr8.4:80767117-80767136 MS.gene022542:CDS 40.0%
GAAACAGCTATCCCAATTAG+AGG + chr8.4:80769703-80769722 None:intergenic 40.0%
GAATTTCCTTATAGGGAGTG+AGG - chr8.4:80771293-80771312 MS.gene022542:intron 40.0%
GACTTCAATTTGAGAGGATC+GGG - chr8.4:80770723-80770742 MS.gene022542:intron 40.0%
GCAAGAGAAAGAGATGAAAG+AGG + chr8.4:80768468-80768487 None:intergenic 40.0%
GCACATAAATGGTACCTTTG+GGG + chr8.4:80771344-80771363 None:intergenic 40.0%
GCGAGCACAGATGTTAATTA+TGG + chr8.4:80769897-80769916 None:intergenic 40.0%
GCTTCAGATATGTACCAATG+AGG + chr8.4:80766506-80766525 None:intergenic 40.0%
GGAAACTCTTGCCTCTAATT+GGG - chr8.4:80769689-80769708 MS.gene022542:intron 40.0%
GGAATAGTTGTGCAATAACC+GGG - chr8.4:80768413-80768432 MS.gene022542:intron 40.0%
GTAAGTGGGATGATGTGTAT+GGG - chr8.4:80769952-80769971 MS.gene022542:intron 40.0%
GTCGCAAAAACCTGCAAAAA+AGG + chr8.4:80767357-80767376 None:intergenic 40.0%
GTGCTATATAGGGCTAGATA+AGG - chr8.4:80768151-80768170 MS.gene022542:intron 40.0%
TAAAAAGATGCTGCAGCATC+AGG + chr8.4:80767405-80767424 None:intergenic 40.0%
TATACTTCCACTAGGCAATC+AGG + chr8.4:80770050-80770069 None:intergenic 40.0%
TCTTCTCAATGGCATTACCA+TGG - chr8.4:80766640-80766659 MS.gene022542:intron 40.0%
TGAAGAACAGCTTGGGAAAT+TGG - chr8.4:80769018-80769037 MS.gene022542:CDS 40.0%
TGTAAGTGGGATGATGTGTA+TGG - chr8.4:80769951-80769970 MS.gene022542:intron 40.0%
TTAACCCCTCTGTTTGGATT+GGG - chr8.4:80767514-80767533 MS.gene022542:intron 40.0%
TTATCTGGCAATGTGTTCAC+AGG - chr8.4:80768067-80768086 MS.gene022542:intron 40.0%
TTTAACCCCTCTGTTTGGAT+TGG - chr8.4:80767513-80767532 MS.gene022542:intron 40.0%
! AAATGCTTCACGGGATTTTG+TGG + chr8.4:80771603-80771622 None:intergenic 40.0%
! AATGCTTCACGGGATTTTGT+GGG + chr8.4:80771602-80771621 None:intergenic 40.0%
! ATTGGACTCTTAAAGAGTGC+AGG + chr8.4:80769725-80769744 None:intergenic 40.0%
! CAACTTTTAACCCCTCTGTT+TGG - chr8.4:80767508-80767527 MS.gene022542:intron 40.0%
! CATTGGTTGTTGTTGTATGC+AGG - chr8.4:80768795-80768814 MS.gene022542:intron 40.0%
! CTTTGGATATGGCTTTGCTT+TGG + chr8.4:80770436-80770455 None:intergenic 40.0%
! GAAACCTTTTCCAAAGTTGG+AGG + chr8.4:80771518-80771537 None:intergenic 40.0%
! GCTGGTTTCCATACAAACAT+GGG - chr8.4:80770631-80770650 MS.gene022542:intron 40.0%
! GGTTGTGGATGCATTCTTTT+TGG + chr8.4:80770414-80770433 None:intergenic 40.0%
! TTTTACCTTTCACGTCTACC+TGG - chr8.4:80767420-80767439 MS.gene022542:intron 40.0%
!! ATCCCGTGAAGCATTTTTGT+AGG - chr8.4:80771607-80771626 MS.gene022542:CDS 40.0%
!! CAGTTTTGTCAGTTGCAAGT+CGG + chr8.4:80766700-80766719 None:intergenic 40.0%
!! TCCCGTGAAGCATTTTTGTA+GGG - chr8.4:80771608-80771627 MS.gene022542:CDS 40.0%
!!! ATGTGTATGGGTTGGTTTTG+GGG - chr8.4:80769964-80769983 MS.gene022542:intron 40.0%
!!! GATGTGTATGGGTTGGTTTT+GGG - chr8.4:80769963-80769982 MS.gene022542:intron 40.0%
!!! GGGGTTTTAAAATTAGACCC+AGG - chr8.4:80769750-80769769 MS.gene022542:intron 40.0%
!!! TGATGTGTATGGGTTGGTTT+TGG - chr8.4:80769962-80769981 MS.gene022542:intron 40.0%
AAAGCTCAACGGAGTAGAGA+TGG - chr8.4:80768842-80768861 MS.gene022542:intron 45.0%
AACCTCCCAATCCAAACAGA+GGG + chr8.4:80767522-80767541 None:intergenic 45.0%
ACGAAAAGCTACGAGAGAGA+AGG - chr8.4:80769175-80769194 MS.gene022542:intron 45.0%
AGAAATGCACCATGCATCCT+TGG + chr8.4:80770932-80770951 None:intergenic 45.0%
AGCTTCTCCATTGAGCTTGA+AGG - chr8.4:80770972-80770991 MS.gene022542:intron 45.0%
CAAGAGAAAGACGGTAACTG+AGG + chr8.4:80770254-80770273 None:intergenic 45.0%
CAAGAGTTTCCCACATCACT+TGG + chr8.4:80769680-80769699 None:intergenic 45.0%
CAGAGAAGGAATCACCATAG+AGG + chr8.4:80767999-80768018 None:intergenic 45.0%
CAGTCATCTCCGATATGCAA+AGG - chr8.4:80768181-80768200 MS.gene022542:intron 45.0%
CATTTCACGCCACAATGCAA+GGG + chr8.4:80766831-80766850 None:intergenic 45.0%
CGAAAAGCTACGAGAGAGAA+GGG - chr8.4:80769176-80769195 MS.gene022542:intron 45.0%
CTAACGCCACCACTCAAATA+TGG + chr8.4:80767129-80767148 None:intergenic 45.0%
CTATAATCAGGGGTGGCTTA+AGG - chr8.4:80768344-80768363 MS.gene022542:intron 45.0%
CTCTATGCACTTAAAGAGGG+AGG - chr8.4:80767597-80767616 MS.gene022542:intron 45.0%
GAGGTGCAACAAGAGAAAGA+CGG + chr8.4:80770263-80770282 None:intergenic 45.0%
GAGTAGAGATGGTTGCATGT+GGG - chr8.4:80768853-80768872 MS.gene022542:intron 45.0%
GCGACCCCTGAAATTCTTAT+TGG - chr8.4:80767372-80767391 MS.gene022542:intron 45.0%
GGGAAACTCTTGCCTCTAAT+TGG - chr8.4:80769688-80769707 MS.gene022542:intron 45.0%
TATGCACTTAAAGAGGGAGG+AGG - chr8.4:80767600-80767619 MS.gene022542:intron 45.0%
TATGGTGATCTTGTACACCC+AGG - chr8.4:80769082-80769101 MS.gene022542:intron 45.0%
TCAATTTGAGAGGATCGGGA+TGG - chr8.4:80770727-80770746 MS.gene022542:intron 45.0%
TCTGCACCATATTTGAGTGG+TGG - chr8.4:80767120-80767139 MS.gene022542:CDS 45.0%
TGGCATTGTTAGGCTATCGA+TGG - chr8.4:80767831-80767850 MS.gene022542:intron 45.0%
TTCTATGACAGATGGGTCGT+CGG + chr8.4:80769047-80769066 None:intergenic 45.0%
TTTAGGCAGGCACCTTTCTT+TGG - chr8.4:80768129-80768148 MS.gene022542:intron 45.0%
! GGATCCTCCAACTTTGGAAA+AGG - chr8.4:80771511-80771530 MS.gene022542:intron 45.0%
! TTCTGGTTGCTCTTCAGAGA+TGG - chr8.4:80770384-80770403 MS.gene022542:intron 45.0%
!! CCCGTGAAGCATTTTTGTAG+GGG - chr8.4:80771609-80771628 MS.gene022542:CDS 45.0%
!! GAAGAGGGGTAGCTATTTTG+AGG + chr8.4:80770161-80770180 None:intergenic 45.0%
!! GGCTGGTTTCCATACAAACA+TGG - chr8.4:80770630-80770649 MS.gene022542:intron 45.0%
!! GTTGTATGCAGGAGAGTACT+TGG - chr8.4:80768806-80768825 MS.gene022542:intron 45.0%
!! TATGGCTTTGCTTTGGGTTG+TGG + chr8.4:80770429-80770448 None:intergenic 45.0%
AATGGCATTACCATGGGTGG+TGG - chr8.4:80766647-80766666 MS.gene022542:intron 50.0%
ACCTCCCAATCCAAACAGAG+GGG + chr8.4:80767521-80767540 None:intergenic 50.0%
AGAAAGACGGTAACTGAGGG+TGG + chr8.4:80770250-80770269 None:intergenic 50.0%
ATGGCATTACCATGGGTGGT+GGG - chr8.4:80766648-80766667 MS.gene022542:intron 50.0%
CAGGTGAAACCAAGGATGCA+TGG - chr8.4:80770920-80770939 MS.gene022542:intron 50.0%
CAGTTTCCCTGATTGCCTAG+TGG - chr8.4:80770040-80770059 MS.gene022542:intron 50.0%
CTCAATGGCATTACCATGGG+TGG - chr8.4:80766644-80766663 MS.gene022542:intron 50.0%
CTCCAGGTAGCTCTTCTCAA+TGG - chr8.4:80766629-80766648 MS.gene022542:intron 50.0%
CTGACTGGGGAAAAGCTCAA+CGG - chr8.4:80768831-80768850 MS.gene022542:intron 50.0%
GAACCTCCCAATCCAAACAG+AGG + chr8.4:80767523-80767542 None:intergenic 50.0%
GATATCTGGGGACTTCTGTG+AGG - chr8.4:80771203-80771222 MS.gene022542:intron 50.0%
GCATGCTCTCCAAGTGATGT+GGG - chr8.4:80769668-80769687 MS.gene022542:intron 50.0%
GCATTTCACGCCACAATGCA+AGG + chr8.4:80766832-80766851 None:intergenic 50.0%
GCCGCAGTAGTGTACTACAA+AGG - chr8.4:80769104-80769123 MS.gene022542:intron 50.0%
GGAGAATCGTGCACTTGTAG+AGG + chr8.4:80770282-80770301 None:intergenic 50.0%
GGAGTAGAGATGGTTGCATG+TGG - chr8.4:80768852-80768871 MS.gene022542:intron 50.0%
GGGCAGGAATTTCAATCCCT+GGG - chr8.4:80766669-80766688 MS.gene022542:intron 50.0%
GTGGGATGATGTGTATGGGT+TGG - chr8.4:80769956-80769975 MS.gene022542:intron 50.0%
TCACGTCTACCTGGTCACAT+AGG - chr8.4:80767429-80767448 MS.gene022542:intron 50.0%
TGCATCCTTGGTTTCACCTG+CGG + chr8.4:80770920-80770939 None:intergenic 50.0%
TGCATGCTCTCCAAGTGATG+TGG - chr8.4:80769667-80769686 MS.gene022542:intron 50.0%
TGCCATTGAGAAGAGCTACC+TGG + chr8.4:80766634-80766653 None:intergenic 50.0%
TGTGACCAGGTAGACGTGAA+AGG + chr8.4:80767428-80767447 None:intergenic 50.0%
TGTTAGTGGCCCTTGCATTG+TGG - chr8.4:80766819-80766838 MS.gene022542:intron 50.0%
TTCCAATAGGAAGTTGCCGC+AGG - chr8.4:80770901-80770920 MS.gene022542:intron 50.0%
TTGCAAGTCGGAATGTCCCA+GGG + chr8.4:80766688-80766707 None:intergenic 50.0%
! GGGGCACTTATACTTCCACT+AGG + chr8.4:80770058-80770077 None:intergenic 50.0%
!! ACGTGTAGTGGACAAGGACA+TGG - chr8.4:80771318-80771337 MS.gene022542:intron 50.0%
!! AGAGTACTTGGCTCTGACTG+GGG - chr8.4:80768818-80768837 MS.gene022542:intron 50.0%
!! GAGAGTACTTGGCTCTGACT+GGG - chr8.4:80768817-80768836 MS.gene022542:intron 50.0%
!! GAGGGGTAGCTATTTTGAGG+AGG + chr8.4:80770158-80770177 None:intergenic 50.0%
!! GCGCAACAAGCACTGATCAA+GGG + chr8.4:80771148-80771167 None:intergenic 50.0%
ACGTGCCCTCACTCCCTATA+AGG + chr8.4:80771302-80771321 None:intergenic 55.0%
AGGCTATCGATGGCGATCAG+CGG - chr8.4:80767841-80767860 MS.gene022542:intron 55.0%
AGTTGCCGCAGGTGAAACCA+AGG - chr8.4:80770912-80770931 MS.gene022542:intron 55.0%
CACCTGCGGCAACTTCCTAT+TGG + chr8.4:80770906-80770925 None:intergenic 55.0%
GCAGTGGGATCCTCCAACTT+TGG - chr8.4:80771505-80771524 MS.gene022542:intron 55.0%
GGGGCAGGAATTTCAATCCC+TGG - chr8.4:80766668-80766687 MS.gene022542:intron 55.0%
GTAGTACACTACTGCGGCCT+GGG + chr8.4:80769102-80769121 None:intergenic 55.0%
GTTGCAAGTCGGAATGTCCC+AGG + chr8.4:80766689-80766708 None:intergenic 55.0%
TGGCATTACCATGGGTGGTG+GGG - chr8.4:80766649-80766668 MS.gene022542:intron 55.0%
TGTAGTACACTACTGCGGCC+TGG + chr8.4:80769103-80769122 None:intergenic 55.0%
TTGAGAGGATCGGGATGGTG+TGG - chr8.4:80770732-80770751 MS.gene022542:intron 55.0%
! ACCCCTCTGTTTGGATTGGG+AGG - chr8.4:80767517-80767536 MS.gene022542:intron 55.0%
! AGTGCTTGTTGCGCGAGTAC+CGG - chr8.4:80771154-80771173 MS.gene022542:intron 55.0%
! TAAACGGAAGCACGCCCTTC+AGG + chr8.4:80769784-80769803 None:intergenic 55.0%
!! CGCGCAACAAGCACTGATCA+AGG + chr8.4:80771149-80771168 None:intergenic 55.0%
!! GGAGAGTACTTGGCTCTGAC+TGG - chr8.4:80768816-80768835 MS.gene022542:intron 55.0%
AATTCCTGCCCCACCACCCA+TGG + chr8.4:80766660-80766679 None:intergenic 60.0%
ACCCAGGTAGAAGGGCCTGA+AGG - chr8.4:80769766-80769785 MS.gene022542:intron 60.0%
CCCAGGTAGAAGGGCCTGAA+GGG - chr8.4:80769767-80769786 MS.gene022542:intron 60.0%
CCCTTCAGGCCCTTCTACCT+GGG + chr8.4:80769770-80769789 None:intergenic 60.0%
GGACAAGGACATGGCCCCAA+AGG - chr8.4:80771327-80771346 MS.gene022542:intron 60.0%
!! ATTACCATGGGTGGTGGGGC+AGG - chr8.4:80766653-80766672 MS.gene022542:intron 60.0%
!! GAGGGCACGTGTAGTGGACA+AGG - chr8.4:80771312-80771331 MS.gene022542:intron 60.0%
GCCCTTCAGGCCCTTCTACC+TGG + chr8.4:80769771-80769790 None:intergenic 65.0%
! GGGAGTGAGGGCACGTGTAG+TGG - chr8.4:80771306-80771325 MS.gene022542:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 80766456 80771628 80766456 ID=MS.gene022542
chr8.4 mRNA 80766456 80771628 80766456 ID=MS.gene022542.t1;Parent=MS.gene022542
chr8.4 exon 80771554 80771628 80771554 ID=MS.gene022542.t1.exon1;Parent=MS.gene022542.t1
chr8.4 CDS 80771554 80771628 80771554 ID=cds.MS.gene022542.t1;Parent=MS.gene022542.t1
chr8.4 exon 80771366 80771449 80771366 ID=MS.gene022542.t1.exon2;Parent=MS.gene022542.t1
chr8.4 CDS 80771366 80771449 80771366 ID=cds.MS.gene022542.t1;Parent=MS.gene022542.t1
chr8.4 exon 80770634 80770718 80770634 ID=MS.gene022542.t1.exon3;Parent=MS.gene022542.t1
chr8.4 CDS 80770634 80770718 80770634 ID=cds.MS.gene022542.t1;Parent=MS.gene022542.t1
chr8.4 exon 80769182 80769267 80769182 ID=MS.gene022542.t1.exon4;Parent=MS.gene022542.t1
chr8.4 CDS 80769182 80769267 80769182 ID=cds.MS.gene022542.t1;Parent=MS.gene022542.t1
chr8.4 exon 80768959 80769080 80768959 ID=MS.gene022542.t1.exon5;Parent=MS.gene022542.t1
chr8.4 CDS 80768959 80769080 80768959 ID=cds.MS.gene022542.t1;Parent=MS.gene022542.t1
chr8.4 exon 80768611 80768671 80768611 ID=MS.gene022542.t1.exon6;Parent=MS.gene022542.t1
chr8.4 CDS 80768611 80768671 80768611 ID=cds.MS.gene022542.t1;Parent=MS.gene022542.t1
chr8.4 exon 80767076 80767174 80767076 ID=MS.gene022542.t1.exon7;Parent=MS.gene022542.t1
chr8.4 CDS 80767076 80767174 80767076 ID=cds.MS.gene022542.t1;Parent=MS.gene022542.t1
chr8.4 exon 80766860 80766961 80766860 ID=MS.gene022542.t1.exon8;Parent=MS.gene022542.t1
chr8.4 CDS 80766860 80766961 80766860 ID=cds.MS.gene022542.t1;Parent=MS.gene022542.t1
chr8.4 exon 80766736 80766777 80766736 ID=MS.gene022542.t1.exon9;Parent=MS.gene022542.t1
chr8.4 CDS 80766736 80766777 80766736 ID=cds.MS.gene022542.t1;Parent=MS.gene022542.t1
chr8.4 exon 80766456 80766575 80766456 ID=MS.gene022542.t1.exon10;Parent=MS.gene022542.t1
chr8.4 CDS 80766456 80766575 80766456 ID=cds.MS.gene022542.t1;Parent=MS.gene022542.t1
Gene Sequence

>MS.gene022542

ATGGATGCCTGCAAACAATTTTTTACAACAATCTATACTTTTATATACCTCATTGGTACATATCTGAAGCCGCATGTGAGTATACTAACTATTTCCATCATTCTCAATTATTTCATAGACTCCTCGTATCGAATCTCCTGTTTTTTTATGCTAAATTATTTATTTATACTTTTCTCCAGGTAGCTCTTCTCAATGGCATTACCATGGGTGGTGGGGCAGGAATTTCAATCCCTGGGACATTCCGACTTGCAACTGACAAAACTGTATCTAATATAGAAACCTCTTGCTCATTATTTATGTATTTTCCTTTCGTGGATTGTTGTTATCTGTAAGTTAGGACTTAGGTTTTGTGATTTCAGAATATGTTAGTGGCCCTTGCATTGTGGCGTGAAATGCTTAAATACCGCATTACCTTTAGTAATATAGAAGCTTATACACTAACACTCACTTTATCTTTCCGATGTAGGACTTTGGATTATATAGGTTATTACCAAGCAAATGTTGATAGTGGTAGCTTATCCAATGACAATTGTACAGCACATGTCAAAATATTTGTTTGCTTAATTGTATTATTGGGAAAAGCATTATGTGTTTGGTCTTACAAGTTTAGCGTCTATTTCGATATGGAGAACTGCACATGCCTTTACATAGATGACTTCTCCTTTCTGCACCATATTTGAGTGGTGGCGTTAGTTCTAGTGTTAATATCAAATCATAAATGGAAAGCGGTGGAACAAAAAATTTGTAAATTGGAATTTGGAGTGGCAAATAAGTAACAAGTTGTATGTCTAAGTTAGAATTCTATCCTCTCCTAGTTTAACTAGTTTGTCTTCATTTTGGAAGAGATATGCATTGTATAAATCTTGGTTGCATATGCCGACTTAGCTATAACTTATCACCTTTTTTGCAGGTTTTTGCGACCCCTGAAATTCTTATTGGATTTCATCCTGATGCTGCAGCATCTTTTTACCTTTCACGTCTACCTGGTCACATAGGTAATATTATGTGTGTACAATATGCATGCCTCCATCTTCTGCTTTAAGTTAAAGTTTCAACTTTTAACCCCTCTGTTTGGATTGGGAGGTTCTGTATAACTCATTTTAACAGTTATAGTCTTGAAGATATTTAACATTGTACTGATCTCTATGCACTTAAAGAGGGAGGAGGTTGCAAGTTTTGACAATTTTATATGGTCAAGTTATTAGAAATTAGAATGCGTTATTGTAAAACAAATTGCAATTCTCTTGTCAAAGAGAAGCTCCACTTTGATTGATTTTGTTCATGGAAGAGTCTTATTGGTACAATCGGGATCGACTAAAAGATATAATTCCATATTTACGTTTTATACCTGTTCTTCATCATAGAATGATAGTTTTGGCATTGTTAGGCTATCGATGGCGATCAGCGGTAGTGATCAGTTCATTTAAACTGGGATTGTTACTTAATAGAAATTTCATTGATATTGAGCTGAGTTACAATTCCTTTTTACAAGACTATGACTTGTCTGAAAAAGAGTTTGGAATCTGAATTCTTCTGGATTCCTCTATGGTGATTCCTTCTCTGAGCATTTTATTCAATCCCTTAACTTTCAAAGATTTTTTAGGAAAAATCTTATCTGGCAATGTGTTCACAGGCAATTCAAGTTCAGAAATGGTGCAACACATTTCTGCATTTTTAGGCAGGCACCTTTCTTTGGTGCTATATAGGGCTAGATAAGGTTGTTTACAGTCATCTCCGATATGCAAAGGGATTGAACAGTCTTGCTACATTCCTAGTTCCTTTTATTGCTTTGTTCTTTTTGTTTTCTGTTCACGGGGATACCTTATCCTTTCCCTTCTTCTAATTTTCATCTCTCTTATTATACTTATTTTTTCTATACAATATTTTGCTATAATCAGGGGTGGCTTAAGGTTAGTGTTAGTTATGGTGGAATCTAGTTTTCTACTTAACATAGGTTGGAATAGTTGTGCAATAACCGGGTCAATCTTCAAAATTTAGTTTATGTTTTCCCTCTTTCATCTCTTTCTCTTGCACACATCTTACAAGTTCATAGAATTATTGGAATCCTAAACAGCAATGATATAAATTTCATTTTCTTAACTGATATTATTACTTCCATCGATATCACATGTTATGCACCAATGCTATTATCCAGCCTTATTTATCACATCAAGTATTGACAATATTGACAATATATAATTAAATGATGAAAGAATTGCTTAATAGGTAATCCTCTTATTTTTAACATAATTGATTGATGAGAAATTTTCATGGTGTTAAGAACTAGTTACCAATTGAAGATGTAATTGATGAATTCCTCTGTTAGTCTTTCTTTGTTTCATTGGTTGTTGTTGTATGCAGGAGAGTACTTGGCTCTGACTGGGGAAAAGCTCAACGGAGTAGAGATGGTTGCATGTGGGCTTGCTACACACTATTCACTACTTGCAGTTTAGTTTTGCTAGACCCTATTTCTTTTTTCATTAATTCAATTGAAATAGACTCTTCTTGCTATATGACATTCAAAACCTTCTTTTATTTTGTCCTATAGAGGCTTCCACTAATTGAAGAACAGCTTGGGAAATTGGTTACCGACGACCCATCTGTCATAGAAACCACTTTAGAACAGTATGGTGATCTTGTACACCCAGGCCGCAGTAGTGTACTACAAAGGTTTGATCGTCTTGTCTCTCATTCTCTATTAGAAAAAACAATACAAAAAACGAAAAGCTACGAGAGAGAAGGGCAAGAGATAAAAAGTTCAGTATTTCAAACAGCCTTTCTTTCCATCTTCAAATCAAAACAAAGAAGCCTCTTTAAAAATGATCATTATTAGAAATCCTGAAAGAAGATAAGAAAATAGTATGATGAACAATAAGTCGACAGAATGTTCTCTTTGGTTACTTTTTGTATATTTTGATTCACAGTATAAGATAGTGCTTCTACTTTTTTCTTTTCAGGCTTGAAATTCTAGATAAATGCTTTGGCCATGACACAGTTGAAGAGATTGTTGATGCATTGGTAAGATTTGCATTATTTCTTTAAACAACAATAACAATTAACAAATACCCTTAGGCACTGATTAGCTTTTGCCAAATGAAAAATAGGAAAATATTTTCCCTAAATTAACAAAAGAGGAAAGTATTCAAGTCTAACCACGTTAGGTTAAACTGTAATTTACCCTAAATTTTGCTAAAGAGGGAAAGCATTTATCTGCATGCTCTCCAAGTGATGTGGGAAACTCTTGCCTCTAATTGGGATAGCTGTTTCCTGCACTCTTTAAGAGTCCAATAATTAGGGGTTTTAAAATTAGACCCAGGTAGAAGGGCCTGAAGGGCGTGCTTCCGTTTAGAAGCAGATATGCTATGGCTTACTAGCTGGTGTCTCCACTAAAGCTCTTAGTTGTAATCTTGATCAGATTAACATATATGTGCCAGCTGGCCATAATTAACATCTGTGCTCGCAGTTGAGAAATGTTAAAAGCTCAGCTTGAATATGTGTAAGTGGGATGATGTGTATGGGTTGGTTTTGGGGTACTTGTGTGATTTGTAATTTCAGTTGACAATCAGGGGATTATAAAATATAAACAGTTTCCCTGATTGCCTAGTGGAAGTATAAGTGCCCCAAAAAAGCCAAATAGAGAATTTTTTGGGCATTACTATTCACATCCCTTTTTTACTAACACATCACCTCGTTTTTTTTCCTCCTCAAAATAGCTACCCCTCTTCGTTTTCTATATTTGTCAATACCTACCACAAACTCTTCTTTACAAAATCAAAGACTGTGTTCTGATTCCACCCTCAGTTACCGTCTTTCTCTTGTTGCACCTCTACAAGTGCACGATTCTCCTAAATTATGATGTTGTTGAACATTACAGGGGTCAAATCAGATTGTTGAGATCTGGGAGCAACATATGCATAATGCATGCTTTTTCTGGTTGCTCTTCAGAGATGGAAAACCAAAAAGAATGCATCCACAACCCAAAGCAAAGCCATATCCAAAGTTAGCTTTAACATGTTTGGTTTATGTATAGAAATATCAAGTTGCAACAGTTAAGCCAATTCTACTGTTGTTGAAACTACACAAGTATGAGTGTGGAATGCCTAAACTCTAAAAGCATAGTAATATTTACGAAAAACACATGTACTACTTTCGATAGGTAAGTATATATATTTGTGGCTGGTTTCCATACAAACATGGGGTTTGTCTTTTATTCAAAGTGTTTGTCATATGTGATAATTTTTGGTGCACGCATACAAGTAAAAATAGAGACTTCAATTTGAGAGGATCGGGATGGTGTGGTGGGGCTTTTGTAACATTAAGGGTATTTTTAGAACAAAAAGATATGTTTTGGCTTCTCTTGGATGTGTTCCTTTCTTTTGTATGTGTTGTGACTTACATTTGGATGAACACGTTATCTTTTCTTTTTATTCTTATCATTTTTAAATTTCCAATAGGAAGTTGCCGCAGGTGAAACCAAGGATGCATGGTGCATTTCTACCCTAAATAGACTTAAAGAAGCTTCTCCATTGAGCTTGAAGGTTTCCTTGAGATCTGTGAGTTCCTTTTGCTTGTCTGATGTCTAGATATTTTGAATTCCTGTTTTCTTTCTCTTCTTTTCTCATAACCAGCCAACTGCTTCTATAATGTAATCAATCTATTTGGGATAGATACGAGAAGGTAGATTTCAGACCCTTGATCAGTGCTTGTTGCGCGAGTACCGGATGACTTTACAAGCAATTTCTAAACAGATATCTGGGGACTTCTGTGAGGTATAAACATTGTGAATTTCTGGAAACTGAAACAAACTTCTTATGTCTTTTTCAACATATGTTAATTTGAATTTCCTTATAGGGAGTGAGGGCACGTGTAGTGGACAAGGACATGGCCCCAAAGGTACCATTTATGTGCATTATTTTTTTAATTTTTTTTCAGATTTAAAATTCATTGGCCTAATACAATTTCTTCTTTGCAGACTGATTTTCTCCCTGTTTATATATAAAAATTCAATTGAAAATTGATATTCATACTCTGATTGTGAATTAAATATATGCAGTGGGATCCTCCAACTTTGGAAAAGGTTTCTCAAGATATGGTGGATCAGTACTTCATACCTCTAACTGAATTTGAACCTGATTTAGAGTTACCCACAAAATCCCGTGAAGCATTTTTGTAG

Protein sequence

>MS.gene022542.t1

MDACKQFFTTIYTFIYLIGTYLKPHVALLNGITMGGGAGISIPGTFRLATDKTVFATPEILIGFHPDAAASFYLSRLPGHIGEYLALTGEKLNGVEMVACGLATHYSLLARLPLIEEQLGKLVTDDPSVIETTLEQYGDLVHPGRSSVLQRLEILDKCFGHDTVEEIVDALEVAAGETKDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLLREYRMTLQAISKQISGDFCEGVRARVVDKDMAPKWDPPTLEKVSQDMVDQYFIPLTEFEPDLELPTKSREAFL