AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024208

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024208.t1 MTR_7g082800 90.585 393 7 1 80 442 4 396 0.0 707
MS.gene024208.t1 MTR_6g004220 65.625 480 119 3 1 439 1 475 0.0 637
MS.gene024208.t1 MTR_6g004220 66.091 463 111 3 1 422 8 465 0.0 615
MS.gene024208.t1 MTR_6g004220 64.304 395 95 3 1 354 8 397 7.99e-179 507
MS.gene024208.t1 MTR_1g109060 47.335 469 205 4 9 436 5 472 6.39e-143 417
MS.gene024208.t1 MTR_1g108990 48.180 467 199 5 9 433 5 470 2.24e-140 410
MS.gene024208.t1 MTR_7g082810 46.966 445 194 3 29 432 21 464 2.86e-138 405
MS.gene024208.t1 MTR_1g109060 46.105 475 214 4 9 442 5 478 7.35e-138 404
MS.gene024208.t1 MTR_1g108840 45.957 470 209 6 13 439 25 492 8.51e-133 392
MS.gene024208.t1 MTR_6g004220 59.873 314 80 3 1 273 8 316 4.53e-127 371
MS.gene024208.t1 MTR_6g081410 40.693 462 225 5 12 430 14 469 2.18e-111 337
MS.gene024208.t1 MTR_6g081780 41.126 462 223 5 12 430 14 469 3.70e-111 336
MS.gene024208.t1 MTR_6g066380 41.136 440 215 4 36 432 35 473 2.70e-106 323
MS.gene024208.t1 MTR_8g106670 37.387 444 236 3 28 430 12 454 4.38e-99 305
MS.gene024208.t1 MTR_1g108810 39.177 462 234 4 7 422 8 468 8.43e-99 304
MS.gene024208.t1 MTR_6g081810 38.034 468 221 5 7 432 5 445 2.57e-98 302
MS.gene024208.t1 MTR_6g081400 37.639 449 239 3 23 430 10 458 7.81e-97 299
MS.gene024208.t1 MTR_6g081300 37.255 459 242 5 29 442 11 468 2.35e-95 295
MS.gene024208.t1 MTR_6g081240 35.862 435 237 4 29 422 11 444 5.07e-90 280
MS.gene024208.t1 MTR_6g081310 36.080 449 235 3 46 442 14 462 2.24e-89 280
MS.gene024208.t1 MTR_6g081390 36.971 449 242 3 23 430 7 455 2.97e-89 279
MS.gene024208.t1 MTR_2g078930 32.500 480 271 7 7 435 12 489 3.91e-79 254
MS.gene024208.t1 MTR_4g048000 31.365 491 274 6 4 432 19 508 6.15e-75 243
MS.gene024208.t1 MTR_2g088400 33.110 447 257 4 27 432 51 496 1.46e-74 242
MS.gene024208.t1 MTR_2g079020 31.524 479 279 6 4 435 7 483 7.40e-74 240
MS.gene024208.t1 MTR_2g078960 33.562 438 248 5 39 435 44 479 1.22e-72 236
MS.gene024208.t1 MTR_8g069470 31.733 479 268 9 15 439 31 504 5.83e-71 233
MS.gene024208.t1 MTR_2g022980 31.545 466 273 5 10 432 30 492 3.09e-70 231
MS.gene024208.t1 MTR_2g078970 31.144 472 272 7 11 435 12 477 1.16e-67 224
MS.gene024208.t1 MTR_5g032720 31.064 470 282 7 4 432 12 480 2.46e-65 218
MS.gene024208.t1 MTR_5g033100 29.713 488 287 7 7 442 31 514 5.91e-64 214
MS.gene024208.t1 MTR_1g021740 30.556 468 283 6 5 432 13 478 2.89e-63 212
MS.gene024208.t1 MTR_5g032750 30.947 475 288 8 4 438 12 486 3.73e-63 212
MS.gene024208.t1 MTR_7g087410 32.379 454 265 8 27 439 30 482 1.37e-61 207
MS.gene024208.t1 MTR_7g087400 30.515 485 289 8 1 441 1 481 8.40e-61 205
MS.gene024208.t1 MTR_2g088400 32.108 408 235 4 27 393 51 457 1.13e-60 204
MS.gene024208.t1 MTR_5g067460 28.326 466 282 8 10 428 35 495 4.50e-58 200
MS.gene024208.t1 MTR_3g099700 29.218 486 295 7 1 442 20 500 4.56e-58 199
MS.gene024208.t1 MTR_7g087430 34.204 383 221 5 80 432 4 385 5.66e-58 196
MS.gene024208.t1 MTR_5g090290 28.602 465 287 4 14 433 27 491 1.08e-57 199
MS.gene024208.t1 MTR_0039s0080 29.228 479 292 9 6 439 14 490 2.05e-56 195
MS.gene024208.t1 MTR_7g087410 32.481 391 232 5 80 439 4 393 2.18e-56 192
MS.gene024208.t1 MTR_8g063590 29.821 446 272 4 29 433 54 499 4.19e-56 194
MS.gene024208.t1 MTR_6g043810 28.041 485 283 8 5 428 3 482 4.68e-56 194
MS.gene024208.t1 MTR_6g043810 28.667 450 270 6 29 428 24 472 5.63e-56 193
MS.gene024208.t1 MTR_7g087370 28.807 486 267 8 1 441 1 452 3.05e-55 190
MS.gene024208.t1 MTR_1g101500 29.512 471 277 9 8 428 39 504 6.68e-55 191
MS.gene024208.t1 MTR_6g027200 29.792 480 279 12 3 430 4 477 6.33e-54 187
MS.gene024208.t1 MTR_6g047640 31.290 473 272 10 7 430 3 471 2.18e-53 186
MS.gene024208.t1 MTR_5g010830 29.372 446 263 9 29 428 66 505 2.39e-53 187
MS.gene024208.t1 MTR_3g111020 27.074 458 290 7 14 428 35 491 3.19e-53 187
MS.gene024208.t1 MTR_6g047640 30.867 473 255 11 7 430 3 452 4.12e-53 184
MS.gene024208.t1 MTR_6g047610 29.202 476 279 11 7 430 3 472 5.55e-53 185
MS.gene024208.t1 MTR_1g100180 27.835 485 293 8 4 432 2 485 1.10e-49 176
MS.gene024208.t1 MTR_3g099720 26.889 450 288 4 29 438 42 490 1.60e-48 173
MS.gene024208.t1 MTR_6g047590 29.661 472 280 9 7 430 3 470 1.13e-45 165
MS.gene024208.t1 MTR_6g027190 28.810 479 288 9 1 436 3 471 1.51e-45 165
MS.gene024208.t1 MTR_2g078990 33.459 266 176 1 170 435 42 306 3.92e-45 159
MS.gene024208.t1 MTR_4g027920 26.682 446 277 10 29 428 157 598 5.00e-44 163
MS.gene024208.t1 MTR_6g088805 24.520 469 288 7 8 427 12 463 2.25e-41 153
MS.gene024208.t1 MTR_8g102430 26.484 438 264 7 29 427 24 442 1.12e-38 145
MS.gene024208.t1 MTR_5g011540 26.154 455 288 6 29 436 44 497 1.68e-37 143
MS.gene024208.t1 MTR_2g435930 38.073 218 135 0 216 433 263 480 2.31e-37 142
MS.gene024208.t1 MTR_2g435930 25.301 166 112 2 10 164 1 165 3.10e-12 68.9
MS.gene024208.t1 MTR_2g079030 36.923 195 123 0 227 421 319 513 1.13e-34 135
MS.gene024208.t1 MTR_5g087930 26.651 424 240 8 53 436 51 443 3.99e-31 124
MS.gene024208.t1 MTR_5g090280 26.077 418 236 7 80 436 4 409 4.54e-27 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024208.t1 AT1G66760 45.851 482 214 6 1 439 1 478 4.14e-144 420
MS.gene024208.t1 AT1G64820 47.630 443 190 4 31 432 31 472 1.03e-137 404
MS.gene024208.t1 AT2G04090 47.020 453 198 3 25 436 26 477 6.78e-137 402
MS.gene024208.t1 AT1G66760 45.806 465 205 6 1 422 1 461 1.17e-136 400
MS.gene024208.t1 AT1G71140 44.231 468 215 5 4 430 5 467 2.84e-134 395
MS.gene024208.t1 AT2G04100 45.733 457 206 3 25 440 26 481 4.89e-133 392
MS.gene024208.t1 AT1G66780 48.758 443 185 4 31 432 37 478 2.75e-132 390
MS.gene024208.t1 AT2G04050 44.492 463 208 5 15 430 8 468 8.78e-129 381
MS.gene024208.t1 AT2G04080 43.133 466 221 4 8 430 4 468 2.09e-128 380
MS.gene024208.t1 AT1G15170 44.444 477 218 5 1 431 1 476 4.86e-128 379
MS.gene024208.t1 AT2G04100 46.241 439 194 3 25 422 26 463 6.08e-128 379
MS.gene024208.t1 AT2G04040 45.598 443 199 4 29 430 27 468 1.13e-126 375
MS.gene024208.t1 AT1G15150 42.308 468 222 4 11 431 7 473 5.65e-126 374
MS.gene024208.t1 AT2G04070 42.641 462 218 4 15 430 8 468 1.03e-124 370
MS.gene024208.t1 AT2G04080 42.795 458 218 4 8 422 4 460 9.82e-124 368
MS.gene024208.t1 AT1G15160 42.667 450 216 3 23 431 25 473 2.24e-123 367
MS.gene024208.t1 AT1G15180 42.678 478 226 5 1 431 1 477 5.32e-115 346
MS.gene024208.t1 AT1G66760 44.836 397 172 6 1 354 1 393 1.11e-109 329
MS.gene024208.t1 AT5G52450 40.870 460 227 4 15 430 9 467 3.70e-109 331
MS.gene024208.t1 AT1G73700 39.085 481 245 5 3 442 2 475 6.07e-107 325
MS.gene024208.t1 AT1G15170 47.059 357 159 1 105 431 1 357 1.37e-104 315
MS.gene024208.t1 AT1G15150 44.258 357 169 1 105 431 1 357 2.36e-102 310
MS.gene024208.t1 AT2G34360 37.630 481 240 8 8 442 12 478 1.32e-101 311
MS.gene024208.t1 AT1G66760 47.447 333 145 2 120 422 1 333 2.80e-100 303
MS.gene024208.t1 AT2G34360 33.125 480 221 6 8 442 12 436 3.93e-82 260
MS.gene024208.t1 AT1G61890 31.544 447 260 3 29 432 47 490 1.51e-74 242
MS.gene024208.t1 AT1G61890 31.579 437 253 3 29 422 47 480 9.59e-72 234
MS.gene024208.t1 AT1G11670 31.081 444 266 4 29 432 50 493 1.74e-71 234
MS.gene024208.t1 AT4G21910 35.065 385 212 5 80 430 115 495 1.15e-67 224
MS.gene024208.t1 AT4G21910 35.065 385 212 5 80 430 115 495 1.15e-67 224
MS.gene024208.t1 AT4G21910 34.383 381 220 3 80 430 117 497 1.39e-67 224
MS.gene024208.t1 AT4G21910 34.383 381 220 3 80 430 117 497 1.39e-67 224
MS.gene024208.t1 AT3G21690 32.360 445 259 4 29 432 52 495 1.85e-67 224
MS.gene024208.t1 AT4G21903 34.383 381 220 2 80 430 4 384 2.02e-67 220
MS.gene024208.t1 AT4G21903 34.383 381 220 2 80 430 113 493 3.25e-66 220
MS.gene024208.t1 AT1G15180 43.929 280 127 1 105 354 1 280 3.55e-66 218
MS.gene024208.t1 AT3G23560 32.075 424 246 3 39 421 49 471 5.06e-66 219
MS.gene024208.t1 AT1G12950 29.684 475 287 6 4 432 36 509 1.40e-65 219
MS.gene024208.t1 AT3G23550 32.075 424 246 3 39 421 41 463 1.95e-65 217
MS.gene024208.t1 AT3G26590 30.247 486 280 8 3 432 5 487 4.70e-64 214
MS.gene024208.t1 AT3G59030 29.376 497 290 5 4 439 5 501 5.39e-64 214
MS.gene024208.t1 AT1G23300 30.720 472 266 6 14 432 23 486 6.24e-64 214
MS.gene024208.t1 AT5G38030 29.913 458 274 5 25 439 41 494 4.55e-63 212
MS.gene024208.t1 AT4G21903 34.048 373 216 2 80 422 113 485 1.03e-62 211
MS.gene024208.t1 AT5G65380 29.769 477 284 8 2 432 9 480 4.83e-60 204
MS.gene024208.t1 AT1G33100 30.977 481 283 9 5 441 10 485 1.93e-59 202
MS.gene024208.t1 AT5G44050 29.025 472 292 7 3 432 13 483 3.41e-59 201
MS.gene024208.t1 AT1G61890 30.392 408 238 3 29 393 47 451 6.08e-59 200
MS.gene024208.t1 AT1G33110 31.006 487 282 11 2 439 5 486 7.88e-59 201
MS.gene024208.t1 AT1G47530 29.202 476 290 5 1 430 1 475 1.18e-58 200
MS.gene024208.t1 AT3G26590 31.675 382 232 2 80 432 4 385 1.18e-58 197
MS.gene024208.t1 AT5G10420 29.114 474 287 7 4 432 12 481 9.73e-57 195
MS.gene024208.t1 AT1G33090 31.633 490 279 13 2 441 5 488 1.25e-56 195
MS.gene024208.t1 AT4G23030 28.959 442 271 5 29 428 32 472 2.46e-52 183
MS.gene024208.t1 AT4G00350 29.438 445 270 6 29 432 88 529 3.89e-52 184
MS.gene024208.t1 AT4G29140 28.059 474 296 7 5 436 33 503 5.92e-52 183
MS.gene024208.t1 AT1G47530 30.287 383 236 2 80 432 4 385 8.65e-52 179
MS.gene024208.t1 AT1G33080 29.806 463 277 9 11 430 19 476 1.55e-51 181
MS.gene024208.t1 AT1G71870 30.000 460 256 11 29 426 24 479 6.48e-51 180
MS.gene024208.t1 AT1G33080 30.000 460 274 9 11 427 19 473 8.61e-51 179
MS.gene024208.t1 AT1G58340 26.398 447 287 4 29 434 58 503 2.32e-48 173
MS.gene024208.t1 AT3G03620 28.384 458 287 3 13 430 21 477 2.34e-48 172
MS.gene024208.t1 AT3G03620 28.384 458 287 3 13 430 21 477 2.34e-48 172
MS.gene024208.t1 AT4G25640 30.818 477 279 8 4 432 2 475 1.79e-47 170
MS.gene024208.t1 AT5G49130 28.138 494 296 6 4 442 4 493 2.79e-47 170
MS.gene024208.t1 AT4G25640 30.818 477 279 8 4 432 2 475 4.04e-47 169
MS.gene024208.t1 AT5G17700 27.637 474 294 8 2 430 5 474 7.20e-47 169
MS.gene024208.t1 AT5G17700 27.637 474 294 8 2 430 5 474 7.20e-47 169
MS.gene024208.t1 AT5G52050 26.875 480 288 10 3 427 8 479 1.32e-46 168
MS.gene024208.t1 AT3G23560 29.972 357 208 3 39 354 49 404 6.15e-46 164
MS.gene024208.t1 AT2G38510 24.123 456 297 6 29 439 6 457 2.82e-45 164
MS.gene024208.t1 AT5G19700 27.350 468 292 8 7 428 10 475 3.29e-44 162
MS.gene024208.t1 AT3G59030 27.427 412 238 5 4 354 5 416 2.30e-40 149
MS.gene024208.t1 AT4G25640 30.858 431 247 8 4 386 2 429 5.98e-40 149
MS.gene024208.t1 AT4G22790 27.376 442 277 7 29 427 30 470 5.00e-37 142
MS.gene024208.t1 AT1G33110 29.353 402 231 10 2 355 5 401 2.56e-36 138
MS.gene024208.t1 AT2G04066 50.407 123 61 0 308 430 41 163 3.36e-36 131
MS.gene024208.t1 AT5G17700 25.377 398 248 8 2 354 5 398 1.60e-26 110

Find 94 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCGAGTTGCTGTAATTAT+TGG 0.166292 7.1:+22141476 MS.gene024208:CDS
TGCAATGATCACCTTGATTT+TGG 0.168604 7.1:+22140533 MS.gene024208:CDS
TGCCAATTTGCCATCCCTTC+TGG 0.207967 7.1:+22140957 MS.gene024208:CDS
TTGCCATTGGTACTGCTTAT+TGG 0.227960 7.1:+22140832 MS.gene024208:CDS
CACCATTGGAAGGTGACTTT+TGG 0.231576 7.1:+22139446 MS.gene024208:CDS
AGTATAATATGTGCTCTTTC+AGG 0.270360 7.1:+22141638 MS.gene024208:CDS
ACTCGGGTTTCGAATGAATT+AGG 0.274720 7.1:+22141422 MS.gene024208:CDS
TCCCTTCTGGACTAATGTTT+TGG 0.275724 7.1:+22140970 MS.gene024208:CDS
GAATATCCACATGAGTGATA+TGG 0.285303 7.1:-22140565 None:intergenic
CTTATTGGTTGAATGTGATT+TGG 0.311806 7.1:+22140847 MS.gene024208:CDS
GTCCCTTGGCATTAAGCTTT+AGG 0.327251 7.1:-22142134 None:intergenic
CTCTGGATGGGAACACTAAC+AGG 0.338195 7.1:+22142156 MS.gene024208:CDS
AGGAGCACCTACAAGATAAT+AGG 0.350338 7.1:-22142088 None:intergenic
CTTGGAGCCTATTATCTTGT+AGG 0.350754 7.1:+22142081 MS.gene024208:CDS
GAGGTTTCGAGCTGCGAATT+AGG 0.357602 7.1:-22141133 None:intergenic
GTCCAGAAGGGATGGCAAAT+TGG 0.360998 7.1:-22140959 None:intergenic
GAAAGATCATACTCTGAATC+TGG 0.367334 7.1:-22140713 None:intergenic
AAACCTCAGTTCTTTCAGTA+TGG 0.373252 7.1:+22141149 MS.gene024208:CDS
GAGATACTTACAATTGTTGC+CGG 0.384614 7.1:+22141103 MS.gene024208:CDS
TACTTCATTCCTCATGCAAT+TGG 0.388661 7.1:+22141284 MS.gene024208:CDS
GTGGAGGATTTCAGACAATA+GGG 0.389445 7.1:+22142046 MS.gene024208:CDS
GATCCATCATGAGCTTCAAT+AGG 0.399956 7.1:-22142400 None:intergenic
TTGATGATGGTTGGACATAT+TGG 0.401641 7.1:+22139550 MS.gene024208:CDS
AGCTTAATGCCAAGGGACTC+TGG 0.407147 7.1:+22142139 MS.gene024208:CDS
ATTCTTCAGCTCCGTAGGTT+TGG 0.413343 7.1:-22140482 None:intergenic
AATATCCACATGAGTGATAT+GGG 0.415645 7.1:-22140564 None:intergenic
GAATGATGAGTTGGCACCAT+TGG 0.418883 7.1:+22139432 MS.gene024208:CDS
GGTGGAGGATTTCAGACAAT+AGG 0.422581 7.1:+22142045 MS.gene024208:CDS
GCTGAAGAATTCAGCAAGAT+TGG 0.423739 7.1:+22140495 MS.gene024208:CDS
GGAATACTAACTTCCTTCTC+TGG 0.430446 7.1:+22139571 MS.gene024208:CDS
TCAAGTTGTGTCGTTGATGA+TGG 0.452973 7.1:+22139537 MS.gene024208:CDS
GGGAATCCAAGGGCGGCAAA+AGG 0.467735 7.1:+22141449 MS.gene024208:CDS
GGGATCCATGGCAGCTCCAA+TGG 0.481092 7.1:+22139486 MS.gene024208:CDS
GAACTCAGCAATGTATAGTA+AGG 0.483039 7.1:-22140934 None:intergenic
GCAGGGATTGCAAGAGGTGG+AGG 0.486694 7.1:+22142030 MS.gene024208:intron
GTTAACAGATTGGCAGAAAG+AGG 0.491201 7.1:+22142218 MS.gene024208:CDS
GTTTCGAATGAATTAGGAGC+AGG 0.497615 7.1:+22141428 MS.gene024208:CDS
GTTCAAGAGGGTGGGATCCA+TGG 0.504420 7.1:+22139474 MS.gene024208:CDS
TAATGCCAAGGGACTCTGGA+TGG 0.506539 7.1:+22142143 MS.gene024208:CDS
GAATGAAGAGAATGATGAGT+TGG 0.511332 7.1:+22139423 MS.gene024208:CDS
GTTCATATCATAGTCTTGAA+TGG 0.516105 7.1:+22141071 MS.gene024208:intron
TCTTCATTCTTTGTTAGCAA+AGG 0.517568 7.1:-22139409 None:intergenic
TGGTTGAATGTGATTTGGCT+TGG 0.518790 7.1:+22140852 MS.gene024208:CDS
TGCCTAAAGCTTAATGCCAA+GGG 0.522840 7.1:+22142132 MS.gene024208:CDS
TTGTAACAATGTTAACAGAT+TGG 0.522867 7.1:+22142208 MS.gene024208:CDS
TGGGCAGAGTTCAAGAGGGT+GGG 0.523186 7.1:+22139466 MS.gene024208:CDS
AAATTGGGACTAGGACATGT+TGG 0.524906 7.1:+22140801 MS.gene024208:intron
TGTTCCCATCCAGAGTCCCT+TGG 0.528019 7.1:-22142148 None:intergenic
GCTGAATTCTTCAGCTCCGT+AGG 0.528316 7.1:-22140487 None:intergenic
GTTGGAGCAGCATTTGCCAT+TGG 0.531423 7.1:+22140819 MS.gene024208:CDS
TTGCCTAAAGCTTAATGCCA+AGG 0.533010 7.1:+22142131 MS.gene024208:CDS
TAGCAATGACAAGGAAGTTG+TGG 0.535228 7.1:+22141565 MS.gene024208:CDS
TACCAAAACATTAGTCCAGA+AGG 0.535664 7.1:-22140972 None:intergenic
AGCAAGTGCAACACCAGAGA+AGG 0.538030 7.1:-22139584 None:intergenic
GGGGAAACAAACCAAAATCA+AGG 0.541125 7.1:-22140544 None:intergenic
AATTAGGAGCAGGGAATCCA+AGG 0.541350 7.1:+22141438 MS.gene024208:CDS
AGTCACCATTGGAGCTGCCA+TGG 0.542672 7.1:-22139491 None:intergenic
TTGGGCAGAGTTCAAGAGGG+TGG 0.551130 7.1:+22139465 MS.gene024208:CDS
GATACAGTTACAGTCACCAT+TGG 0.552705 7.1:-22139502 None:intergenic
GTTGTGTCGTTGATGATGGT+TGG 0.558914 7.1:+22139541 MS.gene024208:CDS
GCCCAAAAGTCACCTTCCAA+TGG 0.563804 7.1:-22139448 None:intergenic
AATGCCAAGGGACTCTGGAT+GGG 0.568290 7.1:+22142144 MS.gene024208:CDS
GTTTCCCCATATCACTCATG+TGG 0.573571 7.1:+22140559 MS.gene024208:CDS
ATAGGGGCTTATGTGAACCT+TGG 0.575107 7.1:+22142063 MS.gene024208:CDS
AGATACTTACAATTGTTGCC+GGG 0.578227 7.1:+22141104 MS.gene024208:CDS
ATGCAATTGGAGCTTCTGCA+AGG 0.579820 7.1:+22141297 MS.gene024208:CDS
AAGCCTATTGAAGCTCATGA+TGG 0.581438 7.1:+22142397 MS.gene024208:CDS
TCAACGACACAACTTGAAGA+AGG 0.582325 7.1:-22139531 None:intergenic
ACTTTATGTGGCCAAACCTA+CGG 0.584131 7.1:+22140471 MS.gene024208:CDS
AAACATTAGTCCAGAAGGGA+TGG 0.586414 7.1:-22140967 None:intergenic
GGTGCATTAGAAACTTTATG+TGG 0.586910 7.1:+22140459 MS.gene024208:intron
CTGCGAATTAGGTAAAAGCC+CGG 0.588885 7.1:-22141122 None:intergenic
CTACAAGATAATAGGCTCCA+AGG 0.594620 7.1:-22142080 None:intergenic
TATTGCAGTCAACAAAAGCA+AGG 0.597479 7.1:+22142359 MS.gene024208:intron
GATGAGTTGGCACCATTGGA+AGG 0.605768 7.1:+22139436 MS.gene024208:CDS
GTACTTGCAGGGATTGCAAG+AGG 0.607287 7.1:+22142024 MS.gene024208:intron
CAACCAATAAGCAGTACCAA+TGG 0.609757 7.1:-22140835 None:intergenic
CTAACAGACACACAAAGAAG+AGG 0.611652 7.1:-22141608 None:intergenic
TGTGGATTATGTTACAGACA+TGG 0.611763 7.1:+22141583 MS.gene024208:CDS
ACCAAAACATTAGTCCAGAA+GGG 0.612088 7.1:-22140971 None:intergenic
TGGAGGATTTCAGACAATAG+GGG 0.632602 7.1:+22142047 MS.gene024208:CDS
TTTCGAATGAATTAGGAGCA+GGG 0.637279 7.1:+22141429 MS.gene024208:CDS
CTTGCAGGGATTGCAAGAGG+TGG 0.639235 7.1:+22142027 MS.gene024208:intron
TCTGCATAGAGAGATGGGTA+AGG 0.644068 7.1:+22139375 None:intergenic
TGTAATTATTGGAATTGCTG+AGG 0.648765 7.1:+22141487 MS.gene024208:CDS
CATATCATAGTCTTGAATGG+TGG 0.649709 7.1:+22141074 MS.gene024208:intron
ATTGCAGTCAACAAAAGCAA+GGG 0.655709 7.1:+22142360 MS.gene024208:intron
GCAGAAGCTCCAATTGCATG+AGG 0.660952 7.1:-22141293 None:intergenic
ATTAGGAGCAGGGAATCCAA+GGG 0.670050 7.1:+22141439 MS.gene024208:CDS
TCAAAGATTGAAGAACAGCA+TGG 0.672291 7.1:-22140680 None:intergenic
AAATGCTTATAGCAATGACA+AGG 0.686965 7.1:+22141556 MS.gene024208:CDS
ATATCCACATGAGTGATATG+GGG 0.690515 7.1:-22140563 None:intergenic
AGGAGCAGGGAATCCAAGGG+CGG 0.695441 7.1:+22141442 MS.gene024208:CDS
TCACCATACTGAAAGAACTG+AGG 0.729273 7.1:-22141152 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCATATAAACAAACTATA+AGG + chr7.1:22141832-22141851 MS.gene024208:intron 15.0%
!!! AAAGATAATCCTATAAATTT+TGG + chr7.1:22141389-22141408 MS.gene024208:intron 15.0%
!! ACACACACAAAAAAAAATAT+TGG - chr7.1:22141330-22141349 None:intergenic 20.0%
!! ATTTATTTGAGCTTATTTAC+TGG - chr7.1:22141969-22141988 None:intergenic 20.0%
!! CACACACAAAAAAAAATATT+GGG - chr7.1:22141329-22141348 None:intergenic 20.0%
!! TTTAAGAATTAAGATGATGT+TGG - chr7.1:22141702-22141721 None:intergenic 20.0%
!!! ATGTCAAACTTTTTAAGATA+GGG + chr7.1:22139947-22139966 MS.gene024208:intron 20.0%
!!! CTTTGTTTTAGGAATTTTAT+AGG + chr7.1:22141533-22141552 MS.gene024208:CDS 20.0%
! AAACCCAAAAAATATGCTAT+AGG - chr7.1:22142111-22142130 None:intergenic 25.0%
! AAGTTTGACATCATATTAAG+AGG - chr7.1:22139938-22139957 None:intergenic 25.0%
! AGTTAAATAAAGAAACCAAG+TGG - chr7.1:22140357-22140376 None:intergenic 25.0%
! ATAAGCTAAAAACAGCTTAT+CGG + chr7.1:22141889-22141908 MS.gene024208:intron 25.0%
! ATCAAGCAAAGAAACAAAAA+GGG - chr7.1:22142279-22142298 None:intergenic 25.0%
! CTGCAAAAACCAAAATTTAT+AGG - chr7.1:22141401-22141420 None:intergenic 25.0%
! GATGATTCATTCAAAATTGT+AGG - chr7.1:22140381-22140400 None:intergenic 25.0%
! GGTAAATAAAGTATGATCAA+TGG + chr7.1:22140083-22140102 MS.gene024208:intron 25.0%
! TAAATTAGAAGAACACTTCA+TGG - chr7.1:22141223-22141242 None:intergenic 25.0%
! TTGTAACAATGTTAACAGAT+TGG + chr7.1:22142208-22142227 MS.gene024208:CDS 25.0%
!! ACTCAATTTGTTTCTCATAA+AGG - chr7.1:22139893-22139912 None:intergenic 25.0%
!! CACTAAGTGATTATATTTTG+TGG + chr7.1:22142335-22142354 MS.gene024208:intron 25.0%
!!! ACTTCATGGCTTTATTTAAA+TGG - chr7.1:22141209-22141228 None:intergenic 25.0%
!!! GATAAATTACTCTTGCTTTT+CGG + chr7.1:22140591-22140610 MS.gene024208:CDS 25.0%
!!! GATGTCAAACTTTTTAAGAT+AGG + chr7.1:22139946-22139965 MS.gene024208:intron 25.0%
!!! TGGTTCGATTTTTAAAACAT+TGG + chr7.1:22140252-22140271 MS.gene024208:intron 25.0%
!!! TTTTAAAAATCGAACCAAAC+CGG - chr7.1:22140249-22140268 None:intergenic 25.0%
AAATAAAGAAACCAAGTGGT+TGG - chr7.1:22140353-22140372 None:intergenic 30.0%
AAATGCTTATAGCAATGACA+AGG + chr7.1:22141556-22141575 MS.gene024208:CDS 30.0%
AATATCCACATGAGTGATAT+GGG - chr7.1:22140567-22140586 None:intergenic 30.0%
AGTATAATATGTGCTCTTTC+AGG + chr7.1:22141638-22141657 MS.gene024208:CDS 30.0%
ATGCAAACACAAAATCACAA+TGG - chr7.1:22140754-22140773 None:intergenic 30.0%
CATCAAGCAAAGAAACAAAA+AGG - chr7.1:22142280-22142299 None:intergenic 30.0%
TCTTCATTCTTTGTTAGCAA+AGG - chr7.1:22139412-22139431 None:intergenic 30.0%
TGGTGTCTGGTATTTAAATT+GGG + chr7.1:22140786-22140805 MS.gene024208:intron 30.0%
TGTAATTATTGGAATTGCTG+AGG + chr7.1:22141487-22141506 MS.gene024208:CDS 30.0%
! AAAACAGTTGATATCTGGTT+CGG - chr7.1:22140133-22140152 None:intergenic 30.0%
! CTGTTTTATACCACTCAAAA+TGG + chr7.1:22140146-22140165 MS.gene024208:intron 30.0%
! CTTATTGGTTGAATGTGATT+TGG + chr7.1:22140847-22140866 MS.gene024208:CDS 30.0%
! GGTATAAAACAGTTGATATC+TGG - chr7.1:22140138-22140157 None:intergenic 30.0%
! GTTCATATCATAGTCTTGAA+TGG + chr7.1:22141071-22141090 MS.gene024208:intron 30.0%
! TTGGTGTCTGGTATTTAAAT+TGG + chr7.1:22140785-22140804 MS.gene024208:intron 30.0%
!! ACAAACTCCGGTTTTTAATT+AGG - chr7.1:22142006-22142025 None:intergenic 30.0%
!! CAAACTCCGGTTTTTAATTA+GGG - chr7.1:22142005-22142024 None:intergenic 30.0%
!! CTTATTTTCATATGCTCTCT+AGG - chr7.1:22141874-22141893 None:intergenic 30.0%
!!! ATTTTGGTTTTTGCAGTACT+CGG + chr7.1:22141405-22141424 MS.gene024208:intron 30.0%
!!! GCACATTGTTTCTTTGTTTT+AGG + chr7.1:22141522-22141541 MS.gene024208:CDS 30.0%
!!! GCTCCTATAGCATATTTTTT+GGG + chr7.1:22142105-22142124 MS.gene024208:CDS 30.0%
!!! TGCTCCTATAGCATATTTTT+TGG + chr7.1:22142104-22142123 MS.gene024208:CDS 30.0%
!!! TGGTTCGGTTTTTAAAACAT+TGG - chr7.1:22140118-22140137 None:intergenic 30.0%
AAACACTTGTGAGACTGATT+AGG - chr7.1:22141943-22141962 None:intergenic 35.0%
AAACCGCTCAAATAACCAAA+CGG + chr7.1:22140184-22140203 MS.gene024208:intron 35.0%
AAACCTCAGTTCTTTCAGTA+TGG + chr7.1:22141149-22141168 MS.gene024208:CDS 35.0%
AACCGACCCTAATTAAAAAC+CGG + chr7.1:22141996-22142015 MS.gene024208:intron 35.0%
AATACCAGACACCAACAAAT+AGG - chr7.1:22140780-22140799 None:intergenic 35.0%
ACCAAAACATTAGTCCAGAA+GGG - chr7.1:22140974-22140993 None:intergenic 35.0%
AGATACTTACAATTGTTGCC+GGG + chr7.1:22141104-22141123 MS.gene024208:CDS 35.0%
ATATCCACATGAGTGATATG+GGG - chr7.1:22140566-22140585 None:intergenic 35.0%
ATTGCAGTCAACAAAAGCAA+GGG + chr7.1:22142360-22142379 MS.gene024208:intron 35.0%
CTGGTATTTAAATTGGGACT+AGG + chr7.1:22140792-22140811 MS.gene024208:intron 35.0%
GAAAGATCATACTCTGAATC+TGG - chr7.1:22140716-22140735 None:intergenic 35.0%
GAACTCAGCAATGTATAGTA+AGG - chr7.1:22140937-22140956 None:intergenic 35.0%
GAATATCCACATGAGTGATA+TGG - chr7.1:22140568-22140587 None:intergenic 35.0%
GAATGAAGAGAATGATGAGT+TGG + chr7.1:22139423-22139442 MS.gene024208:CDS 35.0%
GAATGAATGACAGATTGGAA+TGG + chr7.1:22140434-22140453 MS.gene024208:intron 35.0%
GAGATACTTACAATTGTTGC+CGG + chr7.1:22141103-22141122 MS.gene024208:CDS 35.0%
GGTGCATTAGAAACTTTATG+TGG + chr7.1:22140459-22140478 MS.gene024208:intron 35.0%
GTTTGCATGTACCTATTTGT+TGG + chr7.1:22140766-22140785 MS.gene024208:intron 35.0%
TACCAAAACATTAGTCCAGA+AGG - chr7.1:22140975-22140994 None:intergenic 35.0%
TACTTCATTCCTCATGCAAT+TGG + chr7.1:22141284-22141303 MS.gene024208:CDS 35.0%
TATTGCAGTCAACAAAAGCA+AGG + chr7.1:22142359-22142378 MS.gene024208:intron 35.0%
TCAAAGATTGAAGAACAGCA+TGG - chr7.1:22140683-22140702 None:intergenic 35.0%
TCAGAGACTACTGAAACTAT+TGG + chr7.1:22140294-22140313 MS.gene024208:intron 35.0%
TCAGAGTATGATCTTTCCAA+TGG + chr7.1:22140719-22140738 MS.gene024208:intron 35.0%
TTTCGAATGAATTAGGAGCA+GGG + chr7.1:22141429-22141448 MS.gene024208:CDS 35.0%
TTTGCGAATGAATGACAGAT+TGG + chr7.1:22140429-22140448 MS.gene024208:intron 35.0%
! AATCTAAGTGTTGCTCTGTT+TGG + chr7.1:22141731-22141750 MS.gene024208:intron 35.0%
! ACATCTTCAATCAGAAGTGT+CGG + chr7.1:22139833-22139852 MS.gene024208:intron 35.0%
! ATCTCTTTTGCTGAATGTAC+TGG + chr7.1:22139607-22139626 MS.gene024208:intron 35.0%
! ATTCCTTCACTCTGAAAAGA+GGG - chr7.1:22140036-22140055 None:intergenic 35.0%
! CATATCATAGTCTTGAATGG+TGG + chr7.1:22141074-22141093 MS.gene024208:intron 35.0%
! TAATCTAGAATGTTGTCGAG+TGG + chr7.1:22140062-22140081 MS.gene024208:intron 35.0%
! TGCAATGATCACCTTGATTT+TGG + chr7.1:22140533-22140552 MS.gene024208:CDS 35.0%
! TGTGGATTATGTTACAGACA+TGG + chr7.1:22141583-22141602 MS.gene024208:CDS 35.0%
! TTGTTTGTTAGAGATCGTAG+TGG + chr7.1:22142310-22142329 MS.gene024208:intron 35.0%
!! ATTTGTTGTTTCCAACCACT+TGG + chr7.1:22140339-22140358 MS.gene024208:intron 35.0%
!! GTTCGAGTTGCTGTAATTAT+TGG + chr7.1:22141476-22141495 MS.gene024208:CDS 35.0%
!! GTTTGTATCAGTGTTGTTTC+TGG - chr7.1:22139750-22139769 None:intergenic 35.0%
!! TTGATGATGGTTGGACATAT+TGG + chr7.1:22139550-22139569 MS.gene024208:CDS 35.0%
!!! ATCTTCGTTTTTTCACAAGC+TGG - chr7.1:22140897-22140916 None:intergenic 35.0%
!!! TTTTGGTTTTTGCAGTACTC+GGG + chr7.1:22141406-22141425 MS.gene024208:intron 35.0%
AAACATTAGTCCAGAAGGGA+TGG - chr7.1:22140970-22140989 None:intergenic 40.0%
AAATTGGGACTAGGACATGT+TGG + chr7.1:22140801-22140820 MS.gene024208:intron 40.0%
AAGCCTATTGAAGCTCATGA+TGG + chr7.1:22142397-22142416 MS.gene024208:CDS 40.0%
ACAATGGAGCTGAAAACCAT+TGG - chr7.1:22140738-22140757 None:intergenic 40.0%
ACTCGGGTTTCGAATGAATT+AGG + chr7.1:22141422-22141441 MS.gene024208:CDS 40.0%
ACTTTATGTGGCCAAACCTA+CGG + chr7.1:22140471-22140490 MS.gene024208:CDS 40.0%
AGTTCTTTCAGTATGGTGAG+TGG + chr7.1:22141156-22141175 MS.gene024208:intron 40.0%
CAACCAATAAGCAGTACCAA+TGG - chr7.1:22140838-22140857 None:intergenic 40.0%
CTAACAGACACACAAAGAAG+AGG - chr7.1:22141611-22141630 None:intergenic 40.0%
CTACAAGATAATAGGCTCCA+AGG - chr7.1:22142083-22142102 None:intergenic 40.0%
CTTGGAGCCTATTATCTTGT+AGG + chr7.1:22142081-22142100 MS.gene024208:CDS 40.0%
GACAACATTCTAGATTAGCG+AGG - chr7.1:22140059-22140078 None:intergenic 40.0%
GATACAGTTACAGTCACCAT+TGG - chr7.1:22139505-22139524 None:intergenic 40.0%
GATCCATCATGAGCTTCAAT+AGG - chr7.1:22142403-22142422 None:intergenic 40.0%
GCTGAAGAATTCAGCAAGAT+TGG + chr7.1:22140495-22140514 MS.gene024208:CDS 40.0%
GGAATACTAACTTCCTTCTC+TGG + chr7.1:22139571-22139590 MS.gene024208:CDS 40.0%
GGGGAAACAAACCAAAATCA+AGG - chr7.1:22140547-22140566 None:intergenic 40.0%
GTGGAGGATTTCAGACAATA+GGG + chr7.1:22142046-22142065 MS.gene024208:CDS 40.0%
GTTAACAGATTGGCAGAAAG+AGG + chr7.1:22142218-22142237 MS.gene024208:CDS 40.0%
GTTTCGAATGAATTAGGAGC+AGG + chr7.1:22141428-22141447 MS.gene024208:CDS 40.0%
TAGCAATGACAAGGAAGTTG+TGG + chr7.1:22141565-22141584 MS.gene024208:CDS 40.0%
TCAACGACACAACTTGAAGA+AGG - chr7.1:22139534-22139553 None:intergenic 40.0%
TCACCATACTGAAAGAACTG+AGG - chr7.1:22141155-22141174 None:intergenic 40.0%
TGCCTAAAGCTTAATGCCAA+GGG + chr7.1:22142132-22142151 MS.gene024208:CDS 40.0%
TGGAGGATTTCAGACAATAG+GGG + chr7.1:22142047-22142066 MS.gene024208:CDS 40.0%
TGTCCGTTTGGTTATTTGAG+CGG - chr7.1:22140190-22140209 None:intergenic 40.0%
TTGCCATTGGTACTGCTTAT+TGG + chr7.1:22140832-22140851 MS.gene024208:CDS 40.0%
TTGCCTAAAGCTTAATGCCA+AGG + chr7.1:22142131-22142150 MS.gene024208:CDS 40.0%
! ACCATTGGAAGGTGACTTTT+GGG + chr7.1:22139447-22139466 MS.gene024208:CDS 40.0%
! CAGTTTCACTCCATTTTGAG+TGG - chr7.1:22140159-22140178 None:intergenic 40.0%
! GATTCCTTCACTCTGAAAAG+AGG - chr7.1:22140037-22140056 None:intergenic 40.0%
! GTCAGTGTCTGTGTTGATAA+CGG + chr7.1:22139808-22139827 MS.gene024208:intron 40.0%
! TAACCCTCTTTTCAGAGTGA+AGG + chr7.1:22140030-22140049 MS.gene024208:intron 40.0%
! TCAAGTTGTGTCGTTGATGA+TGG + chr7.1:22139537-22139556 MS.gene024208:CDS 40.0%
! TCCCTTCTGGACTAATGTTT+TGG + chr7.1:22140970-22140989 MS.gene024208:CDS 40.0%
! TGGTTGAATGTGATTTGGCT+TGG + chr7.1:22140852-22140871 MS.gene024208:CDS 40.0%
! TGTACCTATTTGTTGGTGTC+TGG + chr7.1:22140773-22140792 MS.gene024208:intron 40.0%
!! AGGAGCACCTACAAGATAAT+AGG - chr7.1:22142091-22142110 None:intergenic 40.0%
!! CTCCGGTTTTTAATTAGGGT+CGG - chr7.1:22142001-22142020 None:intergenic 40.0%
!!! AGAAGTGTCGGTGCTTTTAT+AGG + chr7.1:22139845-22139864 MS.gene024208:intron 40.0%
AAACCGGAGTTTGTACTTGC+AGG + chr7.1:22142012-22142031 MS.gene024208:intron 45.0%
AACCAGTTGAACCATCTGTC+CGG + chr7.1:22140227-22140246 MS.gene024208:intron 45.0%
AACCGGAGTTTGTACTTGCA+GGG + chr7.1:22142013-22142032 MS.gene024208:intron 45.0%
AATTAGGAGCAGGGAATCCA+AGG + chr7.1:22141438-22141457 MS.gene024208:CDS 45.0%
ATAGGGGCTTATGTGAACCT+TGG + chr7.1:22142063-22142082 MS.gene024208:CDS 45.0%
ATCCCTGCAAGTACAAACTC+CGG - chr7.1:22142018-22142037 None:intergenic 45.0%
ATGCAATTGGAGCTTCTGCA+AGG + chr7.1:22141297-22141316 MS.gene024208:CDS 45.0%
ATTAGGAGCAGGGAATCCAA+GGG + chr7.1:22141439-22141458 MS.gene024208:CDS 45.0%
ATTCTTCAGCTCCGTAGGTT+TGG - chr7.1:22140485-22140504 None:intergenic 45.0%
CTGCGAATTAGGTAAAAGCC+CGG - chr7.1:22141125-22141144 None:intergenic 45.0%
GAATGACAGATTGGAATGGC+AGG + chr7.1:22140438-22140457 MS.gene024208:intron 45.0%
GGTGGAGGATTTCAGACAAT+AGG + chr7.1:22142045-22142064 MS.gene024208:CDS 45.0%
GTCCCTTGGCATTAAGCTTT+AGG - chr7.1:22142137-22142156 None:intergenic 45.0%
GTTTCCCCATATCACTCATG+TGG + chr7.1:22140559-22140578 MS.gene024208:CDS 45.0%
! AAACGGACAGTTCTAGTCCA+CGG + chr7.1:22140201-22140220 MS.gene024208:intron 45.0%
! ACTTTTGGGCAGAGTTCAAG+AGG + chr7.1:22139461-22139480 MS.gene024208:CDS 45.0%
! CACCATTGGAAGGTGACTTT+TGG + chr7.1:22139446-22139465 MS.gene024208:CDS 45.0%
! CTTTTGGGCAGAGTTCAAGA+GGG + chr7.1:22139462-22139481 MS.gene024208:CDS 45.0%
! GAATGATGAGTTGGCACCAT+TGG + chr7.1:22139432-22139451 MS.gene024208:CDS 45.0%
! TGCTTGATCCCAGCACTTTT+TGG + chr7.1:22140657-22140676 MS.gene024208:CDS 45.0%
!! GTTGTGTCGTTGATGATGGT+TGG + chr7.1:22139541-22139560 MS.gene024208:CDS 45.0%
AACCGGACAGATGGTTCAAC+TGG - chr7.1:22140232-22140251 None:intergenic 50.0%
AATGCCAAGGGACTCTGGAT+GGG + chr7.1:22142144-22142163 MS.gene024208:CDS 50.0%
AGCAAGTGCAACACCAGAGA+AGG - chr7.1:22139587-22139606 None:intergenic 50.0%
AGCTTAATGCCAAGGGACTC+TGG + chr7.1:22142139-22142158 MS.gene024208:CDS 50.0%
ATCGAACCAAACCGGACAGA+TGG - chr7.1:22140241-22140260 None:intergenic 50.0%
CTCTGGATGGGAACACTAAC+AGG + chr7.1:22142156-22142175 MS.gene024208:CDS 50.0%
GAGGTTTCGAGCTGCGAATT+AGG - chr7.1:22141136-22141155 None:intergenic 50.0%
GCAGAAGCTCCAATTGCATG+AGG - chr7.1:22141296-22141315 None:intergenic 50.0%
GCCCAAAAGTCACCTTCCAA+TGG - chr7.1:22139451-22139470 None:intergenic 50.0%
GCTGAATTCTTCAGCTCCGT+AGG - chr7.1:22140490-22140509 None:intergenic 50.0%
GTACTTGCAGGGATTGCAAG+AGG + chr7.1:22142024-22142043 MS.gene024208:intron 50.0%
GTCCAGAAGGGATGGCAAAT+TGG - chr7.1:22140962-22140981 None:intergenic 50.0%
GTTGAACCATCTGTCCGGTT+TGG + chr7.1:22140232-22140251 MS.gene024208:intron 50.0%
GTTGGAGCAGCATTTGCCAT+TGG + chr7.1:22140819-22140838 MS.gene024208:CDS 50.0%
TAATGCCAAGGGACTCTGGA+TGG + chr7.1:22142143-22142162 MS.gene024208:CDS 50.0%
TGCCAATTTGCCATCCCTTC+TGG + chr7.1:22140957-22140976 MS.gene024208:CDS 50.0%
TGGTTCAACTGGTTGTACCG+TGG - chr7.1:22140221-22140240 None:intergenic 50.0%
! ACAGCATGGCCAAAAAGTGC+TGG - chr7.1:22140669-22140688 None:intergenic 50.0%
! GATGAGTTGGCACCATTGGA+AGG + chr7.1:22139436-22139455 MS.gene024208:CDS 50.0%
!! CAGCATGGCCAAAAAGTGCT+GGG - chr7.1:22140668-22140687 None:intergenic 50.0%
!! GTGGACTAGAACTGTCCGTT+TGG - chr7.1:22140202-22140221 None:intergenic 50.0%
AGTCACCATTGGAGCTGCCA+TGG - chr7.1:22139494-22139513 None:intergenic 55.0%
CTTGCAGGGATTGCAAGAGG+TGG + chr7.1:22142027-22142046 MS.gene024208:intron 55.0%
GTTCAAGAGGGTGGGATCCA+TGG + chr7.1:22139474-22139493 MS.gene024208:CDS 55.0%
TGGGCAGAGTTCAAGAGGGT+GGG + chr7.1:22139466-22139485 MS.gene024208:CDS 55.0%
TGTTCCCATCCAGAGTCCCT+TGG - chr7.1:22142151-22142170 None:intergenic 55.0%
TTGGGCAGAGTTCAAGAGGG+TGG + chr7.1:22139465-22139484 MS.gene024208:CDS 55.0%
AGGAGCAGGGAATCCAAGGG+CGG + chr7.1:22141442-22141461 MS.gene024208:CDS 60.0%
GCAGGGATTGCAAGAGGTGG+AGG + chr7.1:22142030-22142049 MS.gene024208:intron 60.0%
GGGAATCCAAGGGCGGCAAA+AGG + chr7.1:22141449-22141468 MS.gene024208:CDS 60.0%
GGGATCCATGGCAGCTCCAA+TGG + chr7.1:22139486-22139505 MS.gene024208:CDS 60.0%
! ACAGCGCCTTTTGCCGCCCT+TGG - chr7.1:22141458-22141477 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 22139388 22142429 22139388 ID=MS.gene024208
chr7.1 mRNA 22139388 22142429 22139388 ID=MS.gene024208.t1;Parent=MS.gene024208
chr7.1 exon 22139388 22139622 22139388 ID=MS.gene024208.t1.exon1;Parent=MS.gene024208.t1
chr7.1 CDS 22139388 22139622 22139388 ID=cds.MS.gene024208.t1;Parent=MS.gene024208.t1
chr7.1 exon 22140460 22140723 22140460 ID=MS.gene024208.t1.exon2;Parent=MS.gene024208.t1
chr7.1 CDS 22140460 22140723 22140460 ID=cds.MS.gene024208.t1;Parent=MS.gene024208.t1
chr7.1 exon 22140814 22140991 22140814 ID=MS.gene024208.t1.exon3;Parent=MS.gene024208.t1
chr7.1 CDS 22140814 22140991 22140814 ID=cds.MS.gene024208.t1;Parent=MS.gene024208.t1
chr7.1 exon 22141084 22141170 22141084 ID=MS.gene024208.t1.exon4;Parent=MS.gene024208.t1
chr7.1 CDS 22141084 22141170 22141084 ID=cds.MS.gene024208.t1;Parent=MS.gene024208.t1
chr7.1 exon 22141262 22141318 22141262 ID=MS.gene024208.t1.exon5;Parent=MS.gene024208.t1
chr7.1 CDS 22141262 22141318 22141262 ID=cds.MS.gene024208.t1;Parent=MS.gene024208.t1
chr7.1 exon 22141421 22141659 22141421 ID=MS.gene024208.t1.exon6;Parent=MS.gene024208.t1
chr7.1 CDS 22141421 22141659 22141421 ID=cds.MS.gene024208.t1;Parent=MS.gene024208.t1
chr7.1 exon 22142034 22142239 22142034 ID=MS.gene024208.t1.exon7;Parent=MS.gene024208.t1
chr7.1 CDS 22142034 22142239 22142034 ID=cds.MS.gene024208.t1;Parent=MS.gene024208.t1
chr7.1 exon 22142367 22142429 22142367 ID=MS.gene024208.t1.exon8;Parent=MS.gene024208.t1
chr7.1 CDS 22142367 22142429 22142367 ID=cds.MS.gene024208.t1;Parent=MS.gene024208.t1
Gene Sequence

>MS.gene024208

ATGGGTAAGGAAGAAGCAACACCTTTGCTAACAAAGAATGAAGAGAATGATGAGTTGGCACCATTGGAAGGTGACTTTTGGGCAGAGTTCAAGAGGGTGGGATCCATGGCAGCTCCAATGGTGACTGTAACTGTATCTCAATACCTTCTTCAAGTTGTGTCGTTGATGATGGTTGGACATATTGGAATACTAACTTCCTTCTCTGGTGTTGCACTTGCTATCTCTTTTGCTGAATGTACTGGCTTCTGTGTTCTTGTAATGTCTTCTTTATTTCTTCTTCTCTATTATGTTTTTTTTTTCTTTTTCTTTTATATGTGATGTGAGTGTGTGTTTTCATGTGTGAAGCACTGACACAGACACCAGAAACAACACTGATACAAACTAATTTAAGAAAATTAATTAATTGAATGTAATGACATTGTCAGTGTCTGTGTTGATAACGGACACATCTTCAATCAGAAGTGTCGGTGCTTTTATAGGTTTTTGTGTCTTTGTGAGACTACCTTTATGAGAAACAAATTGAGTTAGCTGATAAGTGATGATACTTCCTCTTAATATGATGTCAAACTTTTTAAGATAGGGTCTAGAGAAATAGTTGACTTTAAAAGCTTCTCTTCAATCAACTTTCTTGTGTTTTAGTCTTAACCCTCTTTTCAGAGTGAAGGAATCCTCGCTAATCTAGAATGTTGTCGAGTGGTAAATAAAGTATGATCAATGGTTGTTTTGACCAATGTTTTAAAAACCGAACCAGATATCAACTGTTTTATACCACTCAAAATGGAGTGAAACTGCAGTCAAACCGCTCAAATAACCAAACGGACAGTTCTAGTCCACGGTACAACCAGTTGAACCATCTGTCCGGTTTGGTTCGATTTTTAAAACATTGGTTTCAACTAGAAATTGAACTCAGAGACTACTGAAACTATTGGAGCATAGCTGAAACACATAAACATTTGTTGTTTCCAACCACTTGGTTTCTTTATTTAACTTCCTACAATTTTGAATGAATCATCTTCAAGTGTTGTTGATAACTAACTAGATTTTGCGAATGAATGACAGATTGGAATGGCAGGTGCATTAGAAACTTTATGTGGCCAAACCTACGGAGCTGAAGAATTCAGCAAGATTGGAAACTACATTTGCAGTGCAATGATCACCTTGATTTTGGTTTGTTTCCCCATATCACTCATGTGGATATTCATTGATAAATTACTCTTGCTTTTCGGTCAAGACACTGAAATTGCTCAAGCAGCTCGCGAATATTGCATATGCTTGATCCCAGCACTTTTTGGCCATGCTGTTCTTCAATCTTTGATTCGCTACTTCCAGATTCAGAGTATGATCTTTCCAATGGTTTTCAGCTCCATTGTGATTTTGTGTTTGCATGTACCTATTTGTTGGTGTCTGGTATTTAAATTGGGACTAGGACATGTTGGAGCAGCATTTGCCATTGGTACTGCTTATTGGTTGAATGTGATTTGGCTTGGAATTTATATGAAGTATTCTCCAGCTTGTGAAAAAACGAAGATTGTGTTTTCTTACAATTCCTTACTATACATTGCTGAGTTCTGCCAATTTGCCATCCCTTCTGGACTAATGTTTTGGTAAGACATATATGACATAAACTTAACACAAAATGTACAATGATTCTTTTCTTATACTAATTGTTTTTCATATTTCAATGTTCATATCATAGTCTTGAATGGTGGTCATTTGAGATACTTACAATTGTTGCCGGGCTTTTACCTAATTCGCAGCTCGAAACCTCAGTTCTTTCAGTATGGTGAGTGGAATGAATGATCAATTTCTTAACAATTACCATTTAAATAAAGCCATGAAGTGTTCTTCTAATTTATGTAAAAAAACTTTTGCAGTCTTAGCACAACTACATTGCACTACTTCATTCCTCATGCAATTGGAGCTTCTGCAAGGTTTGATCCCAATATTTTTTTTTGTGTGTGTTGCTGTACTACGATACTGTATAACTATCTTCTGTTAAAAAAAGATAATCCTATAAATTTTGGTTTTTGCAGTACTCGGGTTTCGAATGAATTAGGAGCAGGGAATCCAAGGGCGGCAAAAGGCGCTGTTCGAGTTGCTGTAATTATTGGAATTGCTGAGGCAGTTATAGTCAGCACATTGTTTCTTTGTTTTAGGAATTTTATAGGAAATGCTTATAGCAATGACAAGGAAGTTGTGGATTATGTTACAGACATGGTTCCTCTTCTTTGTGTGTCTGTTAGTGCAGATAGTATAATATGTGCTCTTTCAGGTGAGTTTGTTTCTATTTGTTCTACTAGCATAAACTGCACCAACATCATCTTAATTCTTAAATGAGACACAAATCTAAGTGTTGCTCTGTTTGGATAAACAACTTAATTGAGCACTTATAGCATAAATGCTTATCATGTAACTGTTTTTGTATAAACTATTTTTATAATTGTTTTCATATAAACAAACTATAAGGTGTTTTCGTAAGTTATCCTAGAGAGCATATGAAAATAAGCTAAAAACAGCTTATCGGTGTGTCATAAACTGTTTCTGTAAGCTCTCCTAATCAGTCTCACAAGTGTTTATGCCAGTAAATAAGCTCAAATAAATCGATTCAAACCGACCCTAATTAAAAACCGGAGTTTGTACTTGCAGGGATTGCAAGAGGTGGAGGATTTCAGACAATAGGGGCTTATGTGAACCTTGGAGCCTATTATCTTGTAGGTGCTCCTATAGCATATTTTTTGGGTTTTTGCCTAAAGCTTAATGCCAAGGGACTCTGGATGGGAACACTAACAGGATCTATTCTTAATGTAATCATACTAGCTGTTGTAACAATGTTAACAGATTGGCAGAAAGAGGTTGACTTTCTTTCTTTCTTTTCAATTATTTTTAGACCCTTTTTGTTTCTTTGCTTGATGAATTCAATTGTTGTTTGTTAGAGATCGTAGTGGCTCACTAAGTGATTATATTTTGTGGTTATTGCAGTCAACAAAAGCAAGGGAAAGAATAGCTGAGAAGCCTATTGAAGCTCATGATGGATCAATATGA
Protein sequence

>MS.gene024208.t1

MGKEEATPLLTKNEENDELAPLEGDFWAEFKRVGSMAAPMVTVTVSQYLLQVVSLMMVGHIGILTSFSGVALAISFAECALETLCGQTYGAEEFSKIGNYICSAMITLILVCFPISLMWIFIDKLLLLFGQDTEIAQAAREYCICLIPALFGHAVLQSLIRYFQIQRHVGAAFAIGTAYWLNVIWLGIYMKYSPACEKTKIVFSYNSLLYIAEFCQFAIPSGLMFCLEWWSFEILTIVAGLLPNSQLETSVLSVCLSTTTLHYFIPHAIGASASTRVSNELGAGNPRAAKGAVRVAVIIGIAEAVIVSTLFLCFRNFIGNAYSNDKEVVDYVTDMVPLLCVSVSADSIICALSGIARGGGFQTIGAYVNLGAYYLVGAPIAYFLGFCLKLNAKGLWMGTLTGSILNVIILAVVTMLTDWQKESTKARERIAEKPIEAHDGSI