Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73453.t1 | XP_003592601.2 | 96 | 424 | 17 | 0 | 1 | 424 | 52 | 475 | 3.40E-211 | 744.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73453.t1 | Q9C994 | 61.3 | 421 | 163 | 0 | 1 | 421 | 52 | 472 | 2.9e-142 | 506.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73453.t1 | G7IC65 | 96.0 | 424 | 17 | 0 | 1 | 424 | 52 | 475 | 2.4e-211 | 744.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73453.t1 | MTR_1g108990 | 96.698 | 424 | 14 | 0 | 1 | 424 | 52 | 475 | 0.0 | 822 |
MS.gene73453.t1 | MTR_1g109060 | 88.278 | 418 | 49 | 0 | 1 | 418 | 51 | 468 | 0.0 | 730 |
MS.gene73453.t1 | MTR_1g109060 | 86.811 | 417 | 54 | 1 | 1 | 417 | 51 | 466 | 0.0 | 713 |
MS.gene73453.t1 | MTR_1g108840 | 60.748 | 428 | 168 | 0 | 1 | 428 | 68 | 495 | 0.0 | 540 |
MS.gene73453.t1 | MTR_7g082810 | 55.875 | 417 | 184 | 0 | 1 | 417 | 47 | 463 | 1.53e-164 | 471 |
MS.gene73453.t1 | MTR_6g004220 | 50.816 | 429 | 210 | 1 | 1 | 428 | 50 | 478 | 1.74e-156 | 451 |
MS.gene73453.t1 | MTR_6g004220 | 50.856 | 409 | 200 | 1 | 1 | 408 | 57 | 465 | 2.05e-148 | 431 |
MS.gene73453.t1 | MTR_7g082800 | 52.672 | 393 | 186 | 0 | 33 | 425 | 1 | 393 | 1.97e-147 | 425 |
MS.gene73453.t1 | MTR_6g081410 | 52.143 | 420 | 199 | 1 | 1 | 418 | 52 | 471 | 9.50e-147 | 426 |
MS.gene73453.t1 | MTR_6g081780 | 50.714 | 420 | 205 | 1 | 1 | 418 | 52 | 471 | 2.63e-145 | 422 |
MS.gene73453.t1 | MTR_6g066380 | 51.790 | 419 | 200 | 1 | 1 | 417 | 54 | 472 | 7.82e-141 | 411 |
MS.gene73453.t1 | MTR_6g081810 | 49.640 | 417 | 184 | 1 | 1 | 417 | 54 | 444 | 1.06e-130 | 384 |
MS.gene73453.t1 | MTR_6g081300 | 45.714 | 420 | 228 | 0 | 1 | 420 | 37 | 456 | 2.92e-126 | 374 |
MS.gene73453.t1 | MTR_1g108810 | 47.304 | 408 | 215 | 0 | 1 | 408 | 61 | 468 | 1.48e-124 | 370 |
MS.gene73453.t1 | MTR_8g106670 | 44.258 | 418 | 233 | 0 | 1 | 418 | 39 | 456 | 8.84e-122 | 362 |
MS.gene73453.t1 | MTR_6g081240 | 44.282 | 411 | 228 | 1 | 1 | 410 | 36 | 446 | 1.03e-120 | 358 |
MS.gene73453.t1 | MTR_6g004220 | 51.613 | 341 | 164 | 1 | 1 | 340 | 57 | 397 | 4.71e-119 | 355 |
MS.gene73453.t1 | MTR_6g081310 | 43.981 | 432 | 230 | 2 | 1 | 420 | 23 | 454 | 2.78e-117 | 350 |
MS.gene73453.t1 | MTR_6g081390 | 42.005 | 419 | 242 | 1 | 1 | 418 | 39 | 457 | 1.36e-108 | 328 |
MS.gene73453.t1 | MTR_6g081400 | 40.573 | 419 | 248 | 1 | 1 | 418 | 42 | 460 | 9.57e-108 | 326 |
MS.gene73453.t1 | MTR_2g088400 | 37.681 | 414 | 258 | 0 | 5 | 418 | 83 | 496 | 5.41e-96 | 297 |
MS.gene73453.t1 | MTR_4g048000 | 35.266 | 414 | 268 | 0 | 5 | 418 | 95 | 508 | 4.19e-92 | 288 |
MS.gene73453.t1 | MTR_6g004220 | 52.852 | 263 | 121 | 2 | 1 | 262 | 57 | 317 | 7.53e-90 | 275 |
MS.gene73453.t1 | MTR_2g078930 | 37.101 | 407 | 256 | 0 | 1 | 407 | 70 | 476 | 4.98e-88 | 276 |
MS.gene73453.t1 | MTR_2g022980 | 35.507 | 414 | 267 | 0 | 5 | 418 | 79 | 492 | 7.75e-88 | 276 |
MS.gene73453.t1 | MTR_2g078960 | 37.101 | 407 | 256 | 0 | 1 | 407 | 60 | 466 | 1.23e-87 | 275 |
MS.gene73453.t1 | MTR_2g078970 | 37.864 | 412 | 246 | 3 | 1 | 407 | 58 | 464 | 6.56e-87 | 273 |
MS.gene73453.t1 | MTR_2g079020 | 36.855 | 407 | 257 | 0 | 1 | 407 | 64 | 470 | 1.34e-85 | 270 |
MS.gene73453.t1 | MTR_2g088400 | 38.259 | 379 | 234 | 0 | 5 | 383 | 83 | 461 | 2.53e-85 | 268 |
MS.gene73453.t1 | MTR_5g033100 | 36.298 | 416 | 264 | 1 | 5 | 420 | 87 | 501 | 8.67e-83 | 263 |
MS.gene73453.t1 | MTR_1g021740 | 36.211 | 417 | 265 | 1 | 4 | 420 | 65 | 480 | 2.06e-78 | 251 |
MS.gene73453.t1 | MTR_5g032720 | 35.663 | 415 | 265 | 2 | 5 | 418 | 67 | 480 | 4.37e-77 | 248 |
MS.gene73453.t1 | MTR_5g090290 | 35.664 | 429 | 275 | 1 | 1 | 428 | 73 | 501 | 8.96e-76 | 246 |
MS.gene73453.t1 | MTR_8g063590 | 34.762 | 420 | 273 | 1 | 1 | 419 | 80 | 499 | 9.83e-75 | 242 |
MS.gene73453.t1 | MTR_8g069470 | 33.173 | 416 | 277 | 1 | 5 | 420 | 81 | 495 | 2.38e-73 | 239 |
MS.gene73453.t1 | MTR_7g087400 | 33.806 | 423 | 278 | 1 | 4 | 426 | 60 | 480 | 6.42e-71 | 231 |
MS.gene73453.t1 | MTR_5g067460 | 29.808 | 416 | 288 | 2 | 1 | 414 | 82 | 495 | 1.41e-69 | 230 |
MS.gene73453.t1 | MTR_7g087410 | 33.012 | 415 | 277 | 1 | 4 | 418 | 61 | 474 | 2.64e-69 | 228 |
MS.gene73453.t1 | MTR_3g111020 | 31.415 | 417 | 280 | 2 | 1 | 414 | 78 | 491 | 1.14e-68 | 228 |
MS.gene73453.t1 | MTR_1g101500 | 31.655 | 417 | 279 | 2 | 1 | 414 | 91 | 504 | 1.51e-68 | 227 |
MS.gene73453.t1 | MTR_6g043810 | 31.881 | 436 | 284 | 5 | 2 | 426 | 51 | 484 | 1.53e-68 | 226 |
MS.gene73453.t1 | MTR_6g043810 | 31.881 | 436 | 284 | 5 | 2 | 426 | 61 | 494 | 2.27e-68 | 226 |
MS.gene73453.t1 | MTR_5g032750 | 33.571 | 420 | 271 | 6 | 5 | 420 | 67 | 482 | 5.97e-67 | 221 |
MS.gene73453.t1 | MTR_5g010830 | 31.818 | 418 | 277 | 4 | 1 | 414 | 92 | 505 | 7.22e-67 | 222 |
MS.gene73453.t1 | MTR_7g087430 | 34.264 | 394 | 258 | 1 | 33 | 426 | 1 | 393 | 1.72e-66 | 218 |
MS.gene73453.t1 | MTR_7g087410 | 33.420 | 386 | 256 | 1 | 33 | 418 | 1 | 385 | 7.39e-66 | 216 |
MS.gene73453.t1 | MTR_6g088805 | 32.143 | 420 | 268 | 5 | 1 | 413 | 54 | 463 | 2.24e-65 | 217 |
MS.gene73453.t1 | MTR_7g087370 | 32.388 | 423 | 255 | 2 | 4 | 426 | 60 | 451 | 1.11e-64 | 214 |
MS.gene73453.t1 | MTR_3g099700 | 33.095 | 420 | 269 | 5 | 5 | 418 | 77 | 490 | 1.84e-64 | 215 |
MS.gene73453.t1 | MTR_5g087930 | 33.176 | 425 | 262 | 4 | 1 | 425 | 53 | 455 | 4.02e-64 | 213 |
MS.gene73453.t1 | MTR_6g047640 | 32.039 | 412 | 259 | 2 | 5 | 416 | 62 | 452 | 1.33e-63 | 212 |
MS.gene73453.t1 | MTR_6g047640 | 33.252 | 412 | 273 | 1 | 5 | 416 | 62 | 471 | 1.57e-63 | 212 |
MS.gene73453.t1 | MTR_0039s0080 | 29.496 | 417 | 288 | 2 | 1 | 414 | 65 | 478 | 4.69e-63 | 212 |
MS.gene73453.t1 | MTR_8g102430 | 28.571 | 413 | 275 | 2 | 1 | 413 | 50 | 442 | 5.88e-60 | 202 |
MS.gene73453.t1 | MTR_1g100180 | 31.981 | 419 | 283 | 1 | 2 | 420 | 71 | 487 | 9.10e-60 | 202 |
MS.gene73453.t1 | MTR_2g078990 | 37.584 | 298 | 176 | 3 | 115 | 407 | 1 | 293 | 1.02e-59 | 197 |
MS.gene73453.t1 | MTR_6g047610 | 31.678 | 423 | 284 | 3 | 5 | 425 | 62 | 481 | 3.98e-59 | 201 |
MS.gene73453.t1 | MTR_3g099720 | 30.693 | 404 | 279 | 1 | 5 | 408 | 72 | 474 | 9.86e-59 | 200 |
MS.gene73453.t1 | MTR_6g047590 | 32.850 | 414 | 271 | 5 | 5 | 416 | 62 | 470 | 3.03e-55 | 190 |
MS.gene73453.t1 | MTR_4g027920 | 30.879 | 421 | 279 | 8 | 1 | 414 | 183 | 598 | 9.10e-55 | 192 |
MS.gene73453.t1 | MTR_6g027190 | 33.493 | 418 | 271 | 5 | 4 | 418 | 54 | 467 | 1.60e-53 | 186 |
MS.gene73453.t1 | MTR_6g027200 | 32.737 | 391 | 259 | 2 | 29 | 418 | 92 | 479 | 2.10e-52 | 183 |
MS.gene73453.t1 | MTR_2g435930 | 29.070 | 430 | 287 | 2 | 4 | 416 | 49 | 477 | 3.50e-51 | 180 |
MS.gene73453.t1 | MTR_5g090280 | 29.604 | 429 | 257 | 6 | 33 | 428 | 1 | 417 | 2.50e-45 | 162 |
MS.gene73453.t1 | MTR_5g011540 | 29.904 | 418 | 278 | 5 | 4 | 413 | 73 | 483 | 1.26e-42 | 157 |
MS.gene73453.t1 | MTR_2g079030 | 38.660 | 194 | 119 | 0 | 214 | 407 | 320 | 513 | 2.42e-38 | 145 |
MS.gene73453.t1 | MTR_7g007430 | 52.381 | 63 | 30 | 0 | 260 | 322 | 16 | 78 | 9.80e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73453.t1 | AT1G71140 | 64.439 | 419 | 149 | 0 | 1 | 419 | 52 | 470 | 0.0 | 559 |
MS.gene73453.t1 | AT1G15150 | 57.212 | 416 | 178 | 0 | 1 | 416 | 57 | 472 | 1.78e-179 | 509 |
MS.gene73453.t1 | AT1G15160 | 56.410 | 429 | 185 | 1 | 1 | 427 | 57 | 485 | 3.32e-178 | 506 |
MS.gene73453.t1 | AT1G15170 | 59.375 | 416 | 169 | 0 | 1 | 416 | 60 | 475 | 3.51e-177 | 504 |
MS.gene73453.t1 | AT1G15180 | 58.413 | 416 | 173 | 0 | 1 | 416 | 61 | 476 | 3.86e-168 | 481 |
MS.gene73453.t1 | AT1G15170 | 58.640 | 353 | 146 | 0 | 64 | 416 | 4 | 356 | 7.36e-151 | 432 |
MS.gene73453.t1 | AT1G66780 | 52.644 | 416 | 197 | 0 | 1 | 416 | 61 | 476 | 1.81e-149 | 433 |
MS.gene73453.t1 | AT1G15150 | 55.191 | 366 | 162 | 1 | 64 | 427 | 4 | 369 | 5.40e-149 | 428 |
MS.gene73453.t1 | AT1G66760 | 50.820 | 427 | 210 | 0 | 2 | 428 | 55 | 481 | 6.04e-147 | 427 |
MS.gene73453.t1 | AT2G04080 | 50.000 | 416 | 208 | 0 | 1 | 416 | 53 | 468 | 1.06e-146 | 426 |
MS.gene73453.t1 | AT2G04100 | 50.240 | 416 | 207 | 0 | 1 | 416 | 56 | 471 | 4.72e-146 | 424 |
MS.gene73453.t1 | AT2G04070 | 50.000 | 416 | 208 | 0 | 1 | 416 | 53 | 468 | 1.19e-144 | 421 |
MS.gene73453.t1 | AT2G04090 | 49.760 | 416 | 209 | 0 | 1 | 416 | 56 | 471 | 2.11e-143 | 417 |
MS.gene73453.t1 | AT2G04050 | 49.883 | 427 | 210 | 1 | 1 | 427 | 53 | 475 | 9.07e-143 | 416 |
MS.gene73453.t1 | AT2G04080 | 49.510 | 408 | 206 | 0 | 1 | 408 | 53 | 460 | 3.61e-142 | 414 |
MS.gene73453.t1 | AT2G04100 | 49.755 | 408 | 205 | 0 | 1 | 408 | 56 | 463 | 3.62e-141 | 412 |
MS.gene73453.t1 | AT2G04040 | 49.180 | 427 | 213 | 1 | 1 | 427 | 53 | 475 | 3.83e-141 | 412 |
MS.gene73453.t1 | AT1G66760 | 50.611 | 409 | 202 | 0 | 2 | 410 | 55 | 463 | 1.24e-140 | 410 |
MS.gene73453.t1 | AT1G64820 | 47.608 | 418 | 219 | 0 | 1 | 418 | 55 | 472 | 2.10e-138 | 406 |
MS.gene73453.t1 | AT1G73700 | 49.279 | 416 | 211 | 0 | 1 | 416 | 50 | 465 | 2.71e-134 | 394 |
MS.gene73453.t1 | AT5G52450 | 49.074 | 432 | 216 | 1 | 1 | 428 | 52 | 483 | 5.91e-133 | 391 |
MS.gene73453.t1 | AT2G34360 | 47.115 | 416 | 212 | 2 | 1 | 415 | 53 | 461 | 1.36e-126 | 375 |
MS.gene73453.t1 | AT1G66760 | 50.150 | 333 | 166 | 0 | 78 | 410 | 3 | 335 | 3.36e-111 | 330 |
MS.gene73453.t1 | AT1G66760 | 50.147 | 339 | 169 | 0 | 2 | 340 | 55 | 393 | 3.59e-109 | 327 |
MS.gene73453.t1 | AT1G15180 | 56.318 | 277 | 121 | 0 | 64 | 340 | 4 | 280 | 5.83e-107 | 322 |
MS.gene73453.t1 | AT2G34360 | 41.205 | 415 | 196 | 1 | 1 | 415 | 53 | 419 | 1.11e-105 | 320 |
MS.gene73453.t1 | AT1G61890 | 35.680 | 412 | 265 | 0 | 5 | 416 | 77 | 488 | 3.80e-91 | 285 |
MS.gene73453.t1 | AT3G23560 | 37.101 | 407 | 256 | 0 | 1 | 407 | 65 | 471 | 1.40e-89 | 280 |
MS.gene73453.t1 | AT1G61890 | 35.644 | 404 | 260 | 0 | 5 | 408 | 77 | 480 | 3.58e-89 | 279 |
MS.gene73453.t1 | AT3G21690 | 36.232 | 414 | 264 | 0 | 5 | 418 | 82 | 495 | 1.18e-88 | 278 |
MS.gene73453.t1 | AT3G23550 | 36.855 | 407 | 257 | 0 | 1 | 407 | 57 | 463 | 2.90e-88 | 276 |
MS.gene73453.t1 | AT1G11670 | 35.680 | 412 | 265 | 0 | 5 | 416 | 80 | 491 | 3.97e-87 | 274 |
MS.gene73453.t1 | AT4G21910 | 37.260 | 416 | 252 | 4 | 5 | 416 | 87 | 497 | 9.48e-84 | 266 |
MS.gene73453.t1 | AT4G21910 | 37.260 | 416 | 252 | 4 | 5 | 416 | 87 | 497 | 9.48e-84 | 266 |
MS.gene73453.t1 | AT4G21903 | 35.437 | 412 | 265 | 1 | 5 | 416 | 83 | 493 | 3.79e-83 | 264 |
MS.gene73453.t1 | AT4G21910 | 36.779 | 416 | 254 | 4 | 5 | 416 | 85 | 495 | 1.59e-82 | 262 |
MS.gene73453.t1 | AT4G21910 | 36.779 | 416 | 254 | 4 | 5 | 416 | 85 | 495 | 1.59e-82 | 262 |
MS.gene73453.t1 | AT4G21903 | 34.940 | 415 | 265 | 2 | 5 | 415 | 83 | 496 | 2.76e-80 | 257 |
MS.gene73453.t1 | AT4G21903 | 35.677 | 384 | 247 | 0 | 33 | 416 | 1 | 384 | 4.54e-80 | 253 |
MS.gene73453.t1 | AT1G61890 | 35.467 | 375 | 242 | 0 | 5 | 379 | 77 | 451 | 2.91e-79 | 253 |
MS.gene73453.t1 | AT1G47530 | 35.817 | 416 | 266 | 1 | 5 | 420 | 65 | 479 | 2.88e-77 | 248 |
MS.gene73453.t1 | AT3G59030 | 35.646 | 418 | 265 | 2 | 1 | 416 | 77 | 492 | 3.34e-77 | 249 |
MS.gene73453.t1 | AT1G12950 | 33.175 | 422 | 281 | 1 | 5 | 426 | 97 | 517 | 5.31e-76 | 246 |
MS.gene73453.t1 | AT5G38030 | 32.783 | 424 | 284 | 1 | 5 | 428 | 75 | 497 | 4.51e-75 | 243 |
MS.gene73453.t1 | AT3G26590 | 33.413 | 416 | 276 | 1 | 5 | 420 | 75 | 489 | 7.76e-74 | 239 |
MS.gene73453.t1 | AT1G47530 | 36.340 | 388 | 246 | 1 | 33 | 420 | 1 | 387 | 2.56e-73 | 235 |
MS.gene73453.t1 | AT1G23300 | 36.066 | 427 | 268 | 3 | 2 | 426 | 71 | 494 | 2.59e-73 | 239 |
MS.gene73453.t1 | AT5G44050 | 33.976 | 415 | 272 | 2 | 5 | 418 | 70 | 483 | 2.45e-72 | 235 |
MS.gene73453.t1 | AT1G71870 | 32.483 | 431 | 271 | 6 | 1 | 412 | 50 | 479 | 2.26e-70 | 231 |
MS.gene73453.t1 | AT5G65380 | 34.940 | 415 | 268 | 2 | 5 | 418 | 67 | 480 | 3.74e-70 | 229 |
MS.gene73453.t1 | AT5G19700 | 31.667 | 420 | 287 | 0 | 1 | 420 | 62 | 481 | 1.03e-69 | 229 |
MS.gene73453.t1 | AT3G26590 | 33.763 | 388 | 256 | 1 | 33 | 420 | 1 | 387 | 2.78e-69 | 225 |
MS.gene73453.t1 | AT1G33100 | 34.458 | 415 | 271 | 1 | 4 | 418 | 62 | 475 | 9.92e-69 | 226 |
MS.gene73453.t1 | AT1G33090 | 33.012 | 415 | 277 | 1 | 4 | 418 | 65 | 478 | 1.83e-68 | 225 |
MS.gene73453.t1 | AT1G33110 | 33.735 | 415 | 274 | 1 | 4 | 418 | 65 | 478 | 1.71e-67 | 223 |
MS.gene73453.t1 | AT4G00350 | 34.679 | 421 | 269 | 3 | 2 | 420 | 115 | 531 | 4.52e-67 | 223 |
MS.gene73453.t1 | AT4G29140 | 30.508 | 413 | 287 | 0 | 1 | 413 | 82 | 494 | 4.87e-67 | 223 |
MS.gene73453.t1 | AT1G58340 | 31.566 | 415 | 282 | 2 | 1 | 414 | 84 | 497 | 1.21e-66 | 222 |
MS.gene73453.t1 | AT5G10420 | 33.494 | 415 | 274 | 2 | 5 | 418 | 68 | 481 | 2.37e-66 | 220 |
MS.gene73453.t1 | AT2G38510 | 31.250 | 416 | 283 | 3 | 1 | 414 | 32 | 446 | 5.47e-64 | 213 |
MS.gene73453.t1 | AT3G23560 | 35.000 | 340 | 221 | 0 | 1 | 340 | 65 | 404 | 7.06e-64 | 211 |
MS.gene73453.t1 | AT4G23030 | 32.168 | 429 | 284 | 3 | 1 | 425 | 58 | 483 | 6.81e-63 | 211 |
MS.gene73453.t1 | AT1G33080 | 32.048 | 415 | 281 | 1 | 4 | 418 | 65 | 478 | 1.55e-62 | 210 |
MS.gene73453.t1 | AT1G33080 | 31.991 | 422 | 282 | 2 | 4 | 425 | 65 | 481 | 1.78e-62 | 209 |
MS.gene73453.t1 | AT4G25640 | 33.413 | 419 | 277 | 1 | 2 | 420 | 61 | 477 | 1.65e-58 | 199 |
MS.gene73453.t1 | AT5G52050 | 29.327 | 416 | 288 | 1 | 4 | 413 | 64 | 479 | 1.91e-58 | 199 |
MS.gene73453.t1 | AT4G25640 | 33.413 | 419 | 277 | 1 | 2 | 420 | 61 | 477 | 4.21e-58 | 199 |
MS.gene73453.t1 | AT3G03620 | 31.643 | 414 | 280 | 3 | 4 | 416 | 66 | 477 | 4.87e-57 | 196 |
MS.gene73453.t1 | AT3G03620 | 31.643 | 414 | 280 | 3 | 4 | 416 | 66 | 477 | 4.87e-57 | 196 |
MS.gene73453.t1 | AT3G59030 | 33.918 | 342 | 222 | 2 | 1 | 340 | 77 | 416 | 2.53e-54 | 186 |
MS.gene73453.t1 | AT5G17700 | 31.490 | 416 | 278 | 4 | 4 | 416 | 63 | 474 | 6.81e-54 | 187 |
MS.gene73453.t1 | AT5G17700 | 31.490 | 416 | 278 | 4 | 4 | 416 | 63 | 474 | 6.81e-54 | 187 |
MS.gene73453.t1 | AT4G25640 | 33.423 | 371 | 245 | 1 | 2 | 372 | 61 | 429 | 1.01e-51 | 181 |
MS.gene73453.t1 | AT5G49130 | 29.425 | 435 | 283 | 6 | 4 | 419 | 55 | 484 | 1.23e-49 | 176 |
MS.gene73453.t1 | AT4G22790 | 28.916 | 415 | 287 | 5 | 4 | 413 | 59 | 470 | 1.34e-46 | 167 |
MS.gene73453.t1 | AT1G33110 | 31.657 | 338 | 230 | 1 | 4 | 341 | 65 | 401 | 2.19e-43 | 157 |
MS.gene73453.t1 | AT2G04066 | 51.220 | 123 | 60 | 0 | 294 | 416 | 41 | 163 | 1.48e-40 | 142 |
MS.gene73453.t1 | AT5G17700 | 29.706 | 340 | 232 | 4 | 4 | 340 | 63 | 398 | 5.37e-34 | 131 |
Find 88 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCTGTTATATTGGGTTTC+TGG | 0.056697 | 1.4:+83497828 | MS.gene73453:CDS |
GAGCTCCTAGTCTTTCTTTC+TGG | 0.112671 | 1.4:+83497022 | MS.gene73453:CDS |
AATTCCAATTGCTGTTATAT+TGG | 0.215901 | 1.4:+83497820 | MS.gene73453:CDS |
AGTTTACATGGTACCCTTTC+AGG | 0.227806 | 1.4:+83497615 | MS.gene73453:CDS |
CTTGGATTCCATGTAGCTTT+TGG | 0.240667 | 1.4:+83496689 | MS.gene73453:CDS |
GCTGCTGAGCCAGTTGCTTC+TGG | 0.243748 | 1.4:-83497259 | None:intergenic |
AGTTTGTAAAACTTGTTATA+AGG | 0.265767 | 1.4:-83497922 | None:intergenic |
TGCAGTTTCTGAGGCTATAT+TGG | 0.274276 | 1.4:+83497473 | MS.gene73453:CDS |
ATTCCAATTGCTGTTATATT+GGG | 0.276947 | 1.4:+83497821 | MS.gene73453:CDS |
CTCTCTATTGTGGCTCAACT+TGG | 0.315498 | 1.4:+83496496 | MS.gene73453:CDS |
TCTATGATTGCAGGCAATTA+AGG | 0.317453 | 1.4:+83498480 | MS.gene73453:intron |
AATGATGATGGTTGGTCATT+TGG | 0.337881 | 1.4:+83496047 | None:intergenic |
GTTTGTAAAACTTGTTATAA+GGG | 0.343854 | 1.4:-83497921 | None:intergenic |
GAAGTTTCAAGCTGTGGATT+TGG | 0.349679 | 1.4:-83497052 | None:intergenic |
ATCTCTCTTTGTGCTGTCTC+TGG | 0.354104 | 1.4:+83496102 | MS.gene73453:CDS |
TTCCTTCAGCTGGAATGATT+TGG | 0.357308 | 1.4:+83496897 | MS.gene73453:CDS |
TTCGCCTCTCGACGGGTGTT+AGG | 0.359688 | 1.4:+83497510 | MS.gene73453:CDS |
AATTGAGAGGAAAAGGCCTT+TGG | 0.373378 | 1.4:+83497855 | MS.gene73453:CDS |
TTTCTATTGGCACTTCATAC+TGG | 0.376413 | 1.4:+83496759 | MS.gene73453:CDS |
CGCTATGCTATTCCTTCAGC+TGG | 0.379288 | 1.4:+83496887 | MS.gene73453:CDS |
GCAAGAGTTTCAAATGCATT+AGG | 0.381595 | 1.4:+83497399 | MS.gene73453:CDS |
ACTCAATGCGGACAAGCTTA+TGG | 0.385550 | 1.4:+83496398 | MS.gene73453:CDS |
AAACCCAATATAACAGCAAT+TGG | 0.388406 | 1.4:-83497824 | None:intergenic |
ACAAATTATTTCAATGATGA+TGG | 0.391749 | 1.4:+83496035 | None:intergenic |
GCAAAGCAATATAGAAAATT+CGG | 0.403587 | 1.4:+83496422 | MS.gene73453:CDS |
ATGATGATGGTTGGTCATTT+GGG | 0.404709 | 1.4:+83496048 | MS.gene73453:CDS |
AAATCTGGATTAGGTAGCTT+AGG | 0.409316 | 1.4:+83496728 | MS.gene73453:CDS |
GAGGAAAAGGCCTTTGGATT+GGG | 0.414778 | 1.4:+83497861 | MS.gene73453:CDS |
AACTCGGGTTACAATTTCAA+TGG | 0.418595 | 1.4:+83496835 | MS.gene73453:CDS |
TGGTTTGAATTGAGAGGAAA+AGG | 0.423778 | 1.4:+83497848 | MS.gene73453:CDS |
CTTGTGAAATCAAAGGGTCT+TGG | 0.424958 | 1.4:-83496541 | None:intergenic |
ATAAGTTCCTCTGTTACCCT+TGG | 0.428057 | 1.4:+83496671 | MS.gene73453:CDS |
CAGCTTCTTGTGAAATCAAA+GGG | 0.429348 | 1.4:-83496547 | None:intergenic |
TCTCTATTGTGGCTCAACTT+GGG | 0.430995 | 1.4:+83496497 | MS.gene73453:CDS |
ATGGAGTCATTCACTGGAAT+AGG | 0.431417 | 1.4:+83496854 | MS.gene73453:CDS |
AGAGGAAAAGGCCTTTGGAT+TGG | 0.431553 | 1.4:+83497860 | MS.gene73453:CDS |
GGGAAGTTACTGAGTTTACT+TGG | 0.438885 | 1.4:+83496518 | MS.gene73453:CDS |
GGATGTGGTTGGCAGAAGTC+AGG | 0.439503 | 1.4:+83497761 | MS.gene73453:CDS |
CTTTGGATTGGGATAATTGT+TGG | 0.441399 | 1.4:+83497872 | MS.gene73453:CDS |
TTGATCATTTCAGCTTTGAA+TGG | 0.444548 | 1.4:+83496990 | MS.gene73453:intron |
CCAGCTTCTTGTGAAATCAA+AGG | 0.452238 | 1.4:-83496548 | None:intergenic |
CCTTTGATTTCACAAGAAGC+TGG | 0.461234 | 1.4:+83496548 | MS.gene73453:CDS |
GATAAGTCTATCTGTTATAG+TGG | 0.466610 | 1.4:+83497590 | MS.gene73453:CDS |
ATAGGTATTGCTAGAGGATG+TGG | 0.480532 | 1.4:+83497746 | MS.gene73453:intron |
ATTTCAATGGAGTCATTCAC+TGG | 0.481478 | 1.4:+83496848 | MS.gene73453:CDS |
CTCTATTGTGGCTCAACTTG+GGG | 0.483519 | 1.4:+83496498 | MS.gene73453:CDS |
GGATAGCAAAACTGCTTGAC+AGG | 0.491733 | 1.4:-83497900 | None:intergenic |
GTTTCAAATGCATTAGGAGC+TGG | 0.493198 | 1.4:+83497405 | MS.gene73453:CDS |
CCGTCGAGAGGCGAAAATGA+TGG | 0.496382 | 1.4:-83497502 | None:intergenic |
AATATAGAGCCAACCTGAAA+GGG | 0.497653 | 1.4:-83497628 | None:intergenic |
TATACAATTCCAGAAGCAAC+TGG | 0.498567 | 1.4:+83497250 | MS.gene73453:CDS |
ATTATTTCAATGATGATGGT+TGG | 0.500723 | 1.4:+83496039 | None:intergenic |
TGGTTGAATGTGATTATCCT+TGG | 0.502212 | 1.4:+83496779 | MS.gene73453:CDS |
GTGTTCCTCTCTCTCTATTG+TGG | 0.509727 | 1.4:+83496486 | MS.gene73453:CDS |
ATCATTTCAGCTTTGAATGG+TGG | 0.515417 | 1.4:+83496993 | MS.gene73453:intron |
TTATATATTTAGCAATGAGC+AGG | 0.516377 | 1.4:+83497533 | MS.gene73453:CDS |
TTATGCAACTCTTCAGGCAC+TGG | 0.518233 | 1.4:+83496607 | MS.gene73453:CDS |
CAAAAGCTACATGGAATCCA+AGG | 0.523606 | 1.4:-83496688 | None:intergenic |
GGTGGATTATGTCACAGATA+TGG | 0.527663 | 1.4:+83497560 | MS.gene73453:CDS |
AAATATAGAGCCAACCTGAA+AGG | 0.538847 | 1.4:-83497629 | None:intergenic |
AAAACAGAAGTTTCAAGCTG+TGG | 0.540446 | 1.4:-83497058 | None:intergenic |
ATAACCAACCAAAAGCTACA+TGG | 0.545005 | 1.4:-83496697 | None:intergenic |
GTTATAGTGGATAGTTTACA+TGG | 0.546582 | 1.4:+83497603 | MS.gene73453:CDS |
GGTTTCTGGTTTGAATTGAG+AGG | 0.547543 | 1.4:+83497842 | MS.gene73453:CDS |
TTGAGCCACAATAGAGAGAG+AGG | 0.556374 | 1.4:-83496491 | None:intergenic |
TATGACTATTGCAGTTTCTG+AGG | 0.556644 | 1.4:+83497464 | MS.gene73453:CDS |
CACCAAATCATTCCAGCTGA+AGG | 0.565508 | 1.4:-83496899 | None:intergenic |
ATTGCAGGCAATTAAGGCAC+GGG | 0.566924 | 1.4:+83498486 | MS.gene73453:intron |
TCAGGAGCATATGTGAACCT+TGG | 0.571235 | 1.4:+83497779 | MS.gene73453:CDS |
ATTTAGCAATGAGCAGGATG+TGG | 0.575627 | 1.4:+83497539 | MS.gene73453:CDS |
AGGCAATTAAGGCACGGGAA+AGG | 0.578737 | 1.4:+83498491 | MS.gene73453:intron |
AGAATTTCATATATAATCCA+AGG | 0.582854 | 1.4:-83496796 | None:intergenic |
TAGCAATGAGCAGGATGTGG+TGG | 0.589605 | 1.4:+83497542 | MS.gene73453:CDS |
ACAGACAATCGTGCTGCGTG+TGG | 0.597992 | 1.4:-83497432 | None:intergenic |
CGGGAAAGGATATTTCGAGA+AGG | 0.601517 | 1.4:+83498505 | MS.gene73453:CDS |
ACAGAGGAACTTATAACAAG+AGG | 0.610630 | 1.4:-83496662 | None:intergenic |
GATTGCAGGCAATTAAGGCA+CGG | 0.613526 | 1.4:+83498485 | MS.gene73453:intron |
ATAACCTAACACCCGTCGAG+AGG | 0.620438 | 1.4:-83497514 | None:intergenic |
TCTATTATAGGTATTGCTAG+AGG | 0.626271 | 1.4:+83497740 | MS.gene73453:intron |
AAGCAACTGGCTCAGCAGCA+AGG | 0.628073 | 1.4:+83497263 | MS.gene73453:CDS |
GAAGACCAGAAAGAAAGACT+AGG | 0.630328 | 1.4:-83497027 | None:intergenic |
ATGGAATCCAAGGGTAACAG+AGG | 0.649163 | 1.4:-83496678 | None:intergenic |
CAACAATTATCCCAATCCAA+AGG | 0.651502 | 1.4:-83497871 | None:intergenic |
AAAAGCTACATGGAATCCAA+GGG | 0.664643 | 1.4:-83496687 | None:intergenic |
TAGCAAAACTGCTTGACAGG+AGG | 0.664773 | 1.4:-83497897 | None:intergenic |
GTATTGCTAGAGGATGTGGT+TGG | 0.678617 | 1.4:+83497750 | MS.gene73453:CDS |
ATAACAGATAGACTTATCAG+AGG | 0.687739 | 1.4:-83497585 | None:intergenic |
TGTGCACTTGAAACTCAATG+CGG | 0.793392 | 1.4:+83496386 | MS.gene73453:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAAAAATTTGTATTGTAA+TGG | + | chr1.4:83497138-83497157 | MS.gene73453:intron | 10.0% |
!!! | TTTTAGTATAAAAATCTAAT+AGG | + | chr1.4:83498292-83498311 | MS.gene73453:intron | 10.0% |
!!! | CACTCTTAATAAATTATTTT+CGG | - | chr1.4:83498230-83498249 | None:intergenic | 15.0% |
!! | AATCATAGCTAAAAATTAAC+AGG | - | chr1.4:83496956-83496975 | None:intergenic | 20.0% |
!! | AGAATTTCATATATAATCCA+AGG | - | chr1.4:83496799-83496818 | None:intergenic | 20.0% |
!! | ATCATAGCTAAAAATTAACA+GGG | - | chr1.4:83496955-83496974 | None:intergenic | 20.0% |
!! | TCAACACTAATTTATAAGAA+TGG | - | chr1.4:83497187-83497206 | None:intergenic | 20.0% |
!!! | AATGAGTTTATTTTAACGAA+CGG | - | chr1.4:83498451-83498470 | None:intergenic | 20.0% |
!!! | AGTTTGTAAAACTTGTTATA+AGG | - | chr1.4:83497925-83497944 | None:intergenic | 20.0% |
!!! | GTTTGTAAAACTTGTTATAA+GGG | - | chr1.4:83497924-83497943 | None:intergenic | 20.0% |
!!! | TATAACAAGTTTTACAAACT+GGG | + | chr1.4:83497925-83497944 | MS.gene73453:CDS | 20.0% |
!!! | TCATTTTTTCATGAAATTCA+TGG | + | chr1.4:83497681-83497700 | MS.gene73453:intron | 20.0% |
!!! | TGGTTATTAGTTTTTAAATC+TGG | + | chr1.4:83496713-83496732 | MS.gene73453:CDS | 20.0% |
!!! | TTAGTTTTTAAATCTGGATT+AGG | + | chr1.4:83496719-83496738 | MS.gene73453:CDS | 20.0% |
!!! | TTATAACAAGTTTTACAAAC+TGG | + | chr1.4:83497924-83497943 | MS.gene73453:CDS | 20.0% |
! | ATATAATATCAAGGGAAAAG+AGG | - | chr1.4:83496147-83496166 | None:intergenic | 25.0% |
! | ATGTAACACTTGTCTATTAT+AGG | + | chr1.4:83497728-83497747 | MS.gene73453:intron | 25.0% |
! | ATTATTTGCATCAAATCGAA+TGG | + | chr1.4:83496303-83496322 | MS.gene73453:intron | 25.0% |
! | GCAAAGCAATATAGAAAATT+CGG | + | chr1.4:83496422-83496441 | MS.gene73453:CDS | 25.0% |
! | TGAATCTTAATAAGATAGCA+TGG | - | chr1.4:83498408-83498427 | None:intergenic | 25.0% |
! | TGGAATTCCAAAAACATAAT+AGG | - | chr1.4:83497807-83497826 | None:intergenic | 25.0% |
! | TGGAGTCTATATAATATCAA+GGG | - | chr1.4:83496155-83496174 | None:intergenic | 25.0% |
! | TTATATATTTAGCAATGAGC+AGG | + | chr1.4:83497533-83497552 | MS.gene73453:CDS | 25.0% |
! | TTGGAGTCTATATAATATCA+AGG | - | chr1.4:83496156-83496175 | None:intergenic | 25.0% |
! | TTTGTACATATCAAACAGTT+TGG | + | chr1.4:83496356-83496375 | MS.gene73453:intron | 25.0% |
!! | AAACTTCTGTTTTATCCATA+TGG | + | chr1.4:83497068-83497087 | MS.gene73453:CDS | 25.0% |
!! | AATTCCAATTGCTGTTATAT+TGG | + | chr1.4:83497820-83497839 | MS.gene73453:CDS | 25.0% |
!! | ATTCCAATTGCTGTTATATT+GGG | + | chr1.4:83497821-83497840 | MS.gene73453:CDS | 25.0% |
!!! | ATTTGTGTTTTTCGAGTAAA+CGG | - | chr1.4:83498186-83498205 | None:intergenic | 25.0% |
AAAAATCTAATAGGCACAGT+TGG | + | chr1.4:83498301-83498320 | MS.gene73453:intron | 30.0% | |
AAAATCTAATAGGCACAGTT+GGG | + | chr1.4:83498302-83498321 | MS.gene73453:intron | 30.0% | |
AAACCCAATATAACAGCAAT+TGG | - | chr1.4:83497827-83497846 | None:intergenic | 30.0% | |
ATAACAGATAGACTTATCAG+AGG | - | chr1.4:83497588-83497607 | None:intergenic | 30.0% | |
ATAGACTCCAATATCATATC+AGG | + | chr1.4:83496165-83496184 | MS.gene73453:intron | 30.0% | |
ATAGCTAAAAATTAACAGGG+AGG | - | chr1.4:83496952-83496971 | None:intergenic | 30.0% | |
ATGCGTAAAACTAAACACTA+GGG | - | chr1.4:83497103-83497122 | None:intergenic | 30.0% | |
ATGTGTATGCACAAATTGAA+TGG | - | chr1.4:83497307-83497326 | None:intergenic | 30.0% | |
CAAAAACATAATAGGATCCA+AGG | - | chr1.4:83497799-83497818 | None:intergenic | 30.0% | |
GATAAGTCTATCTGTTATAG+TGG | + | chr1.4:83497590-83497609 | MS.gene73453:CDS | 30.0% | |
TGGAAAACCTGATATGATAT+TGG | - | chr1.4:83496175-83496194 | None:intergenic | 30.0% | |
TGTGTATGCACAAATTGAAT+GGG | - | chr1.4:83497306-83497325 | None:intergenic | 30.0% | |
! | AAAACCAACTTTTAAGCTGA+AGG | - | chr1.4:83498257-83498276 | None:intergenic | 30.0% |
! | AAACCAACTTTTAAGCTGAA+GGG | - | chr1.4:83498256-83498275 | None:intergenic | 30.0% |
! | CTTGGATCCTATTATGTTTT+TGG | + | chr1.4:83497797-83497816 | MS.gene73453:CDS | 30.0% |
! | TCTATTATAGGTATTGCTAG+AGG | + | chr1.4:83497740-83497759 | MS.gene73453:intron | 30.0% |
! | TTTTACAAACTGGGAAAAAC+AGG | + | chr1.4:83497934-83497953 | MS.gene73453:CDS | 30.0% |
!! | GATGTTTTTATACGTTATGC+TGG | - | chr1.4:83496195-83496214 | None:intergenic | 30.0% |
!! | GCTATTTCTTTGTTTGTGTT+TGG | + | chr1.4:83497350-83497369 | MS.gene73453:intron | 30.0% |
!! | GTTATAGTGGATAGTTTACA+TGG | + | chr1.4:83497603-83497622 | MS.gene73453:CDS | 30.0% |
!! | TTGATCATTTCAGCTTTGAA+TGG | + | chr1.4:83496990-83497009 | MS.gene73453:intron | 30.0% |
!!! | TTTGTGTTTTTCGAGTAAAC+GGG | - | chr1.4:83498185-83498204 | None:intergenic | 30.0% |
AAAACAGAAGTTTCAAGCTG+TGG | - | chr1.4:83497061-83497080 | None:intergenic | 35.0% | |
AAAAGCTACATGGAATCCAA+GGG | - | chr1.4:83496690-83496709 | None:intergenic | 35.0% | |
AAATATAGAGCCAACCTGAA+AGG | - | chr1.4:83497632-83497651 | None:intergenic | 35.0% | |
AACTCGGGTTACAATTTCAA+TGG | + | chr1.4:83496835-83496854 | MS.gene73453:CDS | 35.0% | |
AATATAGAGCCAACCTGAAA+GGG | - | chr1.4:83497631-83497650 | None:intergenic | 35.0% | |
ACAGAGGAACTTATAACAAG+AGG | - | chr1.4:83496665-83496684 | None:intergenic | 35.0% | |
ATAACCAACCAAAAGCTACA+TGG | - | chr1.4:83496700-83496719 | None:intergenic | 35.0% | |
ATAAGATTTAAGAGGAGGGA+GGG | - | chr1.4:83496929-83496948 | None:intergenic | 35.0% | |
ATACCCTTCAGCTTAAAAGT+TGG | + | chr1.4:83498250-83498269 | MS.gene73453:intron | 35.0% | |
ATTTCAATGGAGTCATTCAC+TGG | + | chr1.4:83496848-83496867 | MS.gene73453:CDS | 35.0% | |
CAACAATTATCCCAATCCAA+AGG | - | chr1.4:83497874-83497893 | None:intergenic | 35.0% | |
CAGCTTCTTGTGAAATCAAA+GGG | - | chr1.4:83496550-83496569 | None:intergenic | 35.0% | |
CATGCGTAAAACTAAACACT+AGG | - | chr1.4:83497104-83497123 | None:intergenic | 35.0% | |
CTAGGGAAAGTTATACCATA+TGG | - | chr1.4:83497086-83497105 | None:intergenic | 35.0% | |
GAGGATAAGATTTAAGAGGA+GGG | - | chr1.4:83496933-83496952 | None:intergenic | 35.0% | |
GCAAGAGTTTCAAATGCATT+AGG | + | chr1.4:83497399-83497418 | MS.gene73453:CDS | 35.0% | |
TACCTGGATGAATTATGACA+TGG | + | chr1.4:83497704-83497723 | MS.gene73453:intron | 35.0% | |
TATACAATTCCAGAAGCAAC+TGG | + | chr1.4:83497250-83497269 | MS.gene73453:CDS | 35.0% | |
TATGACTATTGCAGTTTCTG+AGG | + | chr1.4:83497464-83497483 | MS.gene73453:CDS | 35.0% | |
TCTATGATTGCAGGCAATTA+AGG | + | chr1.4:83498480-83498499 | MS.gene73453:intron | 35.0% | |
TGGTTGAATGTGATTATCCT+TGG | + | chr1.4:83496779-83496798 | MS.gene73453:CDS | 35.0% | |
TGGTTTGAATTGAGAGGAAA+AGG | + | chr1.4:83497848-83497867 | MS.gene73453:CDS | 35.0% | |
TTCATGAAATTCATGGTACC+TGG | + | chr1.4:83497688-83497707 | MS.gene73453:intron | 35.0% | |
TTCCATGTCATAATTCATCC+AGG | - | chr1.4:83497709-83497728 | None:intergenic | 35.0% | |
TTTCTATTGGCACTTCATAC+TGG | + | chr1.4:83496759-83496778 | MS.gene73453:CDS | 35.0% | |
! | AAATCTGGATTAGGTAGCTT+AGG | + | chr1.4:83496728-83496747 | MS.gene73453:CDS | 35.0% |
! | CTGCTGATTGTGAAAAAACT+CGG | + | chr1.4:83496819-83496838 | MS.gene73453:CDS | 35.0% |
! | CTTTGGATTGGGATAATTGT+TGG | + | chr1.4:83497872-83497891 | MS.gene73453:CDS | 35.0% |
! | TGCTGATTGTGAAAAAACTC+GGG | + | chr1.4:83496820-83496839 | MS.gene73453:CDS | 35.0% |
! | TTAGGAGCTGCATTTTCTAT+TGG | + | chr1.4:83496746-83496765 | MS.gene73453:CDS | 35.0% |
! | TTGCTGTTATATTGGGTTTC+TGG | + | chr1.4:83497828-83497847 | MS.gene73453:CDS | 35.0% |
! | TTTTGCTTATGCAACTCTTC+AGG | + | chr1.4:83496601-83496620 | MS.gene73453:CDS | 35.0% |
!! | ATCATTTCAGCTTTGAATGG+TGG | + | chr1.4:83496993-83497012 | MS.gene73453:intron | 35.0% |
!! | ATGATGATGGTTGGTCATTT+GGG | + | chr1.4:83496048-83496067 | MS.gene73453:CDS | 35.0% |
!! | TTTTGAGTGTCTATGATTGC+AGG | + | chr1.4:83498471-83498490 | MS.gene73453:intron | 35.0% |
!!! | CTAGTGTTTAGTTTTACGCA+TGG | + | chr1.4:83497102-83497121 | MS.gene73453:intron | 35.0% |
AATTGAGAGGAAAAGGCCTT+TGG | + | chr1.4:83497855-83497874 | MS.gene73453:CDS | 40.0% | |
AGTTTACATGGTACCCTTTC+AGG | + | chr1.4:83497615-83497634 | MS.gene73453:CDS | 40.0% | |
ATAAGTTCCTCTGTTACCCT+TGG | + | chr1.4:83496671-83496690 | MS.gene73453:CDS | 40.0% | |
ATGGAGTCATTCACTGGAAT+AGG | + | chr1.4:83496854-83496873 | MS.gene73453:CDS | 40.0% | |
ATTTAGCAATGAGCAGGATG+TGG | + | chr1.4:83497539-83497558 | MS.gene73453:CDS | 40.0% | |
CAAAAGCTACATGGAATCCA+AGG | - | chr1.4:83496691-83496710 | None:intergenic | 40.0% | |
CAGGGAGGATAAGATTTAAG+AGG | - | chr1.4:83496937-83496956 | None:intergenic | 40.0% | |
CCAGCTTCTTGTGAAATCAA+AGG | - | chr1.4:83496551-83496570 | None:intergenic | 40.0% | |
CTTGTGAAATCAAAGGGTCT+TGG | - | chr1.4:83496544-83496563 | None:intergenic | 40.0% | |
GAAGACCAGAAAGAAAGACT+AGG | - | chr1.4:83497030-83497049 | None:intergenic | 40.0% | |
GAAGTTTCAAGCTGTGGATT+TGG | - | chr1.4:83497055-83497074 | None:intergenic | 40.0% | |
GATAAGATTTAAGAGGAGGG+AGG | - | chr1.4:83496930-83496949 | None:intergenic | 40.0% | |
GATAGCGCCTCACATATTTA+GGG | + | chr1.4:83498150-83498169 | MS.gene73453:intron | 40.0% | |
GGAGGATAAGATTTAAGAGG+AGG | - | chr1.4:83496934-83496953 | None:intergenic | 40.0% | |
GGGAAGTTACTGAGTTTACT+TGG | + | chr1.4:83496518-83496537 | MS.gene73453:CDS | 40.0% | |
GTTGCATAAGCAAAAAGAGC+AGG | - | chr1.4:83496596-83496615 | None:intergenic | 40.0% | |
GTTTCAAATGCATTAGGAGC+TGG | + | chr1.4:83497405-83497424 | MS.gene73453:CDS | 40.0% | |
GTTTGGTCCCTAAATATGTG+AGG | - | chr1.4:83498160-83498179 | None:intergenic | 40.0% | |
TCTCTATTGTGGCTCAACTT+GGG | + | chr1.4:83496497-83496516 | MS.gene73453:CDS | 40.0% | |
TGTGCACTTGAAACTCAATG+CGG | + | chr1.4:83496386-83496405 | MS.gene73453:CDS | 40.0% | |
TGTTGAGATGATTGACAAGC+TGG | - | chr1.4:83497227-83497246 | None:intergenic | 40.0% | |
TTCCTTCAGCTGGAATGATT+TGG | + | chr1.4:83496897-83496916 | MS.gene73453:CDS | 40.0% | |
! | ATAGGTATTGCTAGAGGATG+TGG | + | chr1.4:83497746-83497765 | MS.gene73453:intron | 40.0% |
! | CCTTTGATTTCACAAGAAGC+TGG | + | chr1.4:83496548-83496567 | MS.gene73453:CDS | 40.0% |
! | CTTGGATTCCATGTAGCTTT+TGG | + | chr1.4:83496689-83496708 | MS.gene73453:CDS | 40.0% |
! | GATTCCATGTAGCTTTTGGT+TGG | + | chr1.4:83496693-83496712 | MS.gene73453:CDS | 40.0% |
! | TGATAGCGCCTCACATATTT+AGG | + | chr1.4:83498149-83498168 | MS.gene73453:intron | 40.0% |
!! | GGTGGATTATGTCACAGATA+TGG | + | chr1.4:83497560-83497579 | MS.gene73453:CDS | 40.0% |
!! | GGTTTCTGGTTTGAATTGAG+AGG | + | chr1.4:83497842-83497861 | MS.gene73453:CDS | 40.0% |
!! | TGCAGTTTCTGAGGCTATAT+TGG | + | chr1.4:83497473-83497492 | MS.gene73453:CDS | 40.0% |
ACTCAATGCGGACAAGCTTA+TGG | + | chr1.4:83496398-83496417 | MS.gene73453:CDS | 45.0% | |
AGAGGAAAAGGCCTTTGGAT+TGG | + | chr1.4:83497860-83497879 | MS.gene73453:CDS | 45.0% | |
ATCTCTCTTTGTGCTGTCTC+TGG | + | chr1.4:83496102-83496121 | MS.gene73453:CDS | 45.0% | |
ATGGAATCCAAGGGTAACAG+AGG | - | chr1.4:83496681-83496700 | None:intergenic | 45.0% | |
ATTGCAGGCAATTAAGGCAC+GGG | + | chr1.4:83498486-83498505 | MS.gene73453:intron | 45.0% | |
CACCAAATCATTCCAGCTGA+AGG | - | chr1.4:83496902-83496921 | None:intergenic | 45.0% | |
CCAGAAAGACTTGGAAGTGA+AGG | - | chr1.4:83497964-83497983 | None:intergenic | 45.0% | |
CCTTCACTTCCAAGTCTTTC+TGG | + | chr1.4:83497961-83497980 | MS.gene73453:intron | 45.0% | |
CGGACTTTCTCATTTCAACG+TGG | - | chr1.4:83498210-83498229 | None:intergenic | 45.0% | |
CGGGAAAGGATATTTCGAGA+AGG | + | chr1.4:83498505-83498524 | MS.gene73453:CDS | 45.0% | |
CTCTATTGTGGCTCAACTTG+GGG | + | chr1.4:83496498-83496517 | MS.gene73453:CDS | 45.0% | |
CTCTCTATTGTGGCTCAACT+TGG | + | chr1.4:83496496-83496515 | MS.gene73453:CDS | 45.0% | |
GAGGAAAAGGCCTTTGGATT+GGG | + | chr1.4:83497861-83497880 | MS.gene73453:CDS | 45.0% | |
GATGATTGACAAGCTGGTCA+TGG | - | chr1.4:83497221-83497240 | None:intergenic | 45.0% | |
GATTGCAGGCAATTAAGGCA+CGG | + | chr1.4:83498485-83498504 | MS.gene73453:intron | 45.0% | |
GGATAGCAAAACTGCTTGAC+AGG | - | chr1.4:83497903-83497922 | None:intergenic | 45.0% | |
GTATTGCTAGAGGATGTGGT+TGG | + | chr1.4:83497750-83497769 | MS.gene73453:CDS | 45.0% | |
GTGTTCCTCTCTCTCTATTG+TGG | + | chr1.4:83496486-83496505 | MS.gene73453:CDS | 45.0% | |
TAGCAAAACTGCTTGACAGG+AGG | - | chr1.4:83497900-83497919 | None:intergenic | 45.0% | |
TTATGCAACTCTTCAGGCAC+TGG | + | chr1.4:83496607-83496626 | MS.gene73453:CDS | 45.0% | |
TTGAGCCACAATAGAGAGAG+AGG | - | chr1.4:83496494-83496513 | None:intergenic | 45.0% | |
! | GAGCTCCTAGTCTTTCTTTC+TGG | + | chr1.4:83497022-83497041 | MS.gene73453:CDS | 45.0% |
! | TACATGGTACCCTTTCAGGT+TGG | + | chr1.4:83497619-83497638 | MS.gene73453:intron | 45.0% |
! | TCAGGAGCATATGTGAACCT+TGG | + | chr1.4:83497779-83497798 | MS.gene73453:CDS | 45.0% |
! | TTTCGAGTAAACGGGCAGTT+TGG | - | chr1.4:83498177-83498196 | None:intergenic | 45.0% |
AGGCAATTAAGGCACGGGAA+AGG | + | chr1.4:83498491-83498510 | MS.gene73453:intron | 50.0% | |
ATAACCTAACACCCGTCGAG+AGG | - | chr1.4:83497517-83497536 | None:intergenic | 50.0% | |
CGCTATGCTATTCCTTCAGC+TGG | + | chr1.4:83496887-83496906 | MS.gene73453:CDS | 50.0% | |
GACGTAGAGCCAGAAAGACT+TGG | - | chr1.4:83497973-83497992 | None:intergenic | 50.0% | |
TAGCAATGAGCAGGATGTGG+TGG | + | chr1.4:83497542-83497561 | MS.gene73453:CDS | 50.0% | |
! | CATCATTTTCGCCTCTCGAC+GGG | + | chr1.4:83497503-83497522 | MS.gene73453:CDS | 50.0% |
! | CCATCATTTTCGCCTCTCGA+CGG | + | chr1.4:83497502-83497521 | MS.gene73453:CDS | 50.0% |
ACAGACAATCGTGCTGCGTG+TGG | - | chr1.4:83497435-83497454 | None:intergenic | 55.0% | |
CCGTCGAGAGGCGAAAATGA+TGG | - | chr1.4:83497505-83497524 | None:intergenic | 55.0% | |
GGATGTGGTTGGCAGAAGTC+AGG | + | chr1.4:83497761-83497780 | MS.gene73453:CDS | 55.0% | |
! | AAGCAACTGGCTCAGCAGCA+AGG | + | chr1.4:83497263-83497282 | MS.gene73453:CDS | 55.0% |
GCTGCTGAGCCAGTTGCTTC+TGG | - | chr1.4:83497262-83497281 | None:intergenic | 60.0% | |
TTCGCCTCTCGACGGGTGTT+AGG | + | chr1.4:83497510-83497529 | MS.gene73453:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 83496048 | 83498555 | 83496048 | ID=MS.gene73453 |
chr1.4 | mRNA | 83496048 | 83498555 | 83496048 | ID=MS.gene73453.t1;Parent=MS.gene73453 |
chr1.4 | exon | 83496048 | 83496137 | 83496048 | ID=MS.gene73453.t1.exon1;Parent=MS.gene73453.t1 |
chr1.4 | CDS | 83496048 | 83496137 | 83496048 | ID=cds.MS.gene73453.t1;Parent=MS.gene73453.t1 |
chr1.4 | exon | 83496374 | 83496918 | 83496374 | ID=MS.gene73453.t1.exon2;Parent=MS.gene73453.t1 |
chr1.4 | CDS | 83496374 | 83496918 | 83496374 | ID=cds.MS.gene73453.t1;Parent=MS.gene73453.t1 |
chr1.4 | exon | 83497003 | 83497089 | 83497003 | ID=MS.gene73453.t1.exon3;Parent=MS.gene73453.t1 |
chr1.4 | CDS | 83497003 | 83497089 | 83497003 | ID=cds.MS.gene73453.t1;Parent=MS.gene73453.t1 |
chr1.4 | exon | 83497228 | 83497284 | 83497228 | ID=MS.gene73453.t1.exon4;Parent=MS.gene73453.t1 |
chr1.4 | CDS | 83497228 | 83497284 | 83497228 | ID=cds.MS.gene73453.t1;Parent=MS.gene73453.t1 |
chr1.4 | exon | 83497398 | 83497636 | 83497398 | ID=MS.gene73453.t1.exon5;Parent=MS.gene73453.t1 |
chr1.4 | CDS | 83497398 | 83497636 | 83497398 | ID=cds.MS.gene73453.t1;Parent=MS.gene73453.t1 |
chr1.4 | exon | 83497750 | 83497955 | 83497750 | ID=MS.gene73453.t1.exon6;Parent=MS.gene73453.t1 |
chr1.4 | CDS | 83497750 | 83497955 | 83497750 | ID=cds.MS.gene73453.t1;Parent=MS.gene73453.t1 |
chr1.4 | exon | 83498493 | 83498555 | 83498493 | ID=MS.gene73453.t1.exon7;Parent=MS.gene73453.t1 |
chr1.4 | CDS | 83498493 | 83498555 | 83498493 | ID=cds.MS.gene73453.t1;Parent=MS.gene73453.t1 |
Gene Sequence |
Protein sequence |