Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73451.t1 | XP_003592601.2 | 95.8 | 475 | 19 | 1 | 1 | 474 | 1 | 475 | 1.70E-235 | 825.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73451.t1 | Q9C994 | 58.8 | 471 | 190 | 2 | 2 | 471 | 5 | 472 | 6.0e-149 | 528.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73451.t1 | G7IC65 | 95.8 | 475 | 19 | 1 | 1 | 474 | 1 | 475 | 1.2e-235 | 825.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73451.t1 | MTR_1g108990 | 96.000 | 475 | 18 | 1 | 1 | 474 | 1 | 475 | 0.0 | 878 |
MS.gene73451.t1 | MTR_1g109060 | 87.607 | 468 | 58 | 0 | 1 | 468 | 1 | 468 | 0.0 | 813 |
MS.gene73451.t1 | MTR_1g109060 | 86.510 | 467 | 62 | 1 | 1 | 467 | 1 | 466 | 0.0 | 800 |
MS.gene73451.t1 | MTR_1g108840 | 57.582 | 488 | 197 | 1 | 1 | 478 | 8 | 495 | 0.0 | 582 |
MS.gene73451.t1 | MTR_7g082810 | 52.991 | 468 | 216 | 1 | 1 | 468 | 1 | 464 | 1.07e-176 | 504 |
MS.gene73451.t1 | MTR_6g004220 | 51.528 | 458 | 221 | 1 | 22 | 478 | 21 | 478 | 2.62e-170 | 488 |
MS.gene73451.t1 | MTR_6g004220 | 52.055 | 438 | 209 | 1 | 22 | 458 | 28 | 465 | 2.47e-163 | 471 |
MS.gene73451.t1 | MTR_6g081410 | 50.647 | 464 | 222 | 2 | 7 | 468 | 13 | 471 | 2.60e-156 | 452 |
MS.gene73451.t1 | MTR_6g081780 | 48.922 | 464 | 230 | 2 | 7 | 468 | 13 | 471 | 4.77e-154 | 447 |
MS.gene73451.t1 | MTR_7g082800 | 52.163 | 393 | 188 | 0 | 83 | 475 | 1 | 393 | 2.65e-146 | 424 |
MS.gene73451.t1 | MTR_6g066380 | 48.712 | 466 | 237 | 1 | 5 | 468 | 8 | 473 | 7.10e-145 | 424 |
MS.gene73451.t1 | MTR_6g081810 | 47.198 | 464 | 219 | 1 | 5 | 468 | 8 | 445 | 8.92e-139 | 407 |
MS.gene73451.t1 | MTR_1g108810 | 47.936 | 436 | 227 | 0 | 23 | 458 | 33 | 468 | 1.88e-135 | 399 |
MS.gene73451.t1 | MTR_6g004220 | 52.703 | 370 | 174 | 1 | 22 | 390 | 28 | 397 | 3.78e-134 | 395 |
MS.gene73451.t1 | MTR_6g081300 | 44.612 | 464 | 252 | 1 | 13 | 476 | 4 | 462 | 1.84e-132 | 391 |
MS.gene73451.t1 | MTR_6g081240 | 44.875 | 439 | 240 | 2 | 23 | 460 | 9 | 446 | 3.81e-130 | 385 |
MS.gene73451.t1 | MTR_8g106670 | 43.584 | 452 | 255 | 0 | 15 | 466 | 3 | 454 | 8.70e-128 | 380 |
MS.gene73451.t1 | MTR_6g081310 | 43.902 | 451 | 241 | 2 | 36 | 474 | 8 | 458 | 1.81e-121 | 363 |
MS.gene73451.t1 | MTR_6g081390 | 42.601 | 446 | 255 | 1 | 24 | 468 | 12 | 457 | 3.37e-116 | 350 |
MS.gene73451.t1 | MTR_6g081400 | 41.031 | 446 | 262 | 1 | 24 | 468 | 15 | 460 | 5.77e-115 | 347 |
MS.gene73451.t1 | MTR_6g004220 | 54.110 | 292 | 131 | 2 | 22 | 312 | 28 | 317 | 3.00e-105 | 317 |
MS.gene73451.t1 | MTR_2g088400 | 37.330 | 442 | 277 | 0 | 25 | 466 | 53 | 494 | 3.55e-98 | 305 |
MS.gene73451.t1 | MTR_2g078930 | 37.011 | 435 | 274 | 0 | 23 | 457 | 42 | 476 | 1.13e-94 | 295 |
MS.gene73451.t1 | MTR_4g048000 | 35.068 | 442 | 287 | 0 | 25 | 466 | 65 | 506 | 4.98e-94 | 294 |
MS.gene73451.t1 | MTR_2g078960 | 35.965 | 456 | 292 | 0 | 2 | 457 | 11 | 466 | 6.41e-94 | 293 |
MS.gene73451.t1 | MTR_2g078970 | 37.727 | 440 | 264 | 3 | 23 | 457 | 30 | 464 | 1.95e-93 | 292 |
MS.gene73451.t1 | MTR_2g079020 | 36.552 | 435 | 276 | 0 | 23 | 457 | 36 | 470 | 1.07e-92 | 290 |
MS.gene73451.t1 | MTR_2g022980 | 35.402 | 435 | 281 | 0 | 32 | 466 | 56 | 490 | 3.35e-89 | 281 |
MS.gene73451.t1 | MTR_2g088400 | 37.653 | 409 | 255 | 0 | 25 | 433 | 53 | 461 | 6.19e-88 | 277 |
MS.gene73451.t1 | MTR_5g033100 | 35.857 | 449 | 287 | 1 | 22 | 470 | 54 | 501 | 1.25e-87 | 278 |
MS.gene73451.t1 | MTR_1g021740 | 36.547 | 446 | 282 | 1 | 25 | 470 | 36 | 480 | 1.90e-81 | 261 |
MS.gene73451.t1 | MTR_8g069470 | 33.630 | 449 | 297 | 1 | 22 | 470 | 48 | 495 | 5.25e-81 | 260 |
MS.gene73451.t1 | MTR_5g090290 | 35.281 | 445 | 283 | 2 | 37 | 478 | 59 | 501 | 5.32e-78 | 254 |
MS.gene73451.t1 | MTR_5g032720 | 34.312 | 443 | 289 | 2 | 25 | 466 | 37 | 478 | 1.52e-77 | 251 |
MS.gene73451.t1 | MTR_8g063590 | 33.857 | 446 | 294 | 1 | 25 | 469 | 54 | 499 | 3.89e-75 | 245 |
MS.gene73451.t1 | MTR_7g087400 | 32.017 | 481 | 316 | 3 | 1 | 476 | 6 | 480 | 3.56e-74 | 241 |
MS.gene73451.t1 | MTR_7g087410 | 33.183 | 443 | 295 | 1 | 24 | 466 | 31 | 472 | 1.05e-73 | 241 |
MS.gene73451.t1 | MTR_6g043810 | 30.913 | 482 | 319 | 6 | 7 | 476 | 5 | 484 | 5.44e-73 | 239 |
MS.gene73451.t1 | MTR_6g043810 | 30.913 | 482 | 319 | 6 | 7 | 476 | 15 | 494 | 6.12e-73 | 239 |
MS.gene73451.t1 | MTR_5g067460 | 29.955 | 444 | 307 | 2 | 23 | 464 | 54 | 495 | 1.60e-72 | 239 |
MS.gene73451.t1 | MTR_1g101500 | 33.184 | 446 | 288 | 4 | 24 | 464 | 64 | 504 | 2.04e-72 | 239 |
MS.gene73451.t1 | MTR_5g032750 | 33.473 | 478 | 297 | 10 | 1 | 470 | 18 | 482 | 3.08e-72 | 237 |
MS.gene73451.t1 | MTR_5g010830 | 32.287 | 446 | 294 | 4 | 23 | 464 | 64 | 505 | 8.28e-72 | 237 |
MS.gene73451.t1 | MTR_3g111020 | 30.870 | 460 | 312 | 2 | 8 | 464 | 35 | 491 | 1.24e-71 | 237 |
MS.gene73451.t1 | MTR_6g088805 | 32.340 | 470 | 296 | 7 | 1 | 463 | 9 | 463 | 4.62e-70 | 231 |
MS.gene73451.t1 | MTR_7g087370 | 30.769 | 481 | 293 | 4 | 1 | 476 | 6 | 451 | 1.24e-68 | 226 |
MS.gene73451.t1 | MTR_0039s0080 | 29.221 | 462 | 316 | 3 | 24 | 477 | 38 | 496 | 7.19e-67 | 224 |
MS.gene73451.t1 | MTR_3g099700 | 31.603 | 443 | 301 | 2 | 25 | 466 | 47 | 488 | 7.26e-66 | 220 |
MS.gene73451.t1 | MTR_7g087430 | 34.772 | 394 | 256 | 1 | 83 | 476 | 1 | 393 | 1.69e-65 | 216 |
MS.gene73451.t1 | MTR_7g087410 | 33.594 | 384 | 254 | 1 | 83 | 466 | 1 | 383 | 3.26e-65 | 216 |
MS.gene73451.t1 | MTR_5g087930 | 33.021 | 427 | 264 | 4 | 49 | 475 | 51 | 455 | 5.16e-65 | 217 |
MS.gene73451.t1 | MTR_1g100180 | 32.222 | 450 | 303 | 1 | 21 | 470 | 40 | 487 | 8.16e-65 | 218 |
MS.gene73451.t1 | MTR_6g047640 | 31.072 | 457 | 292 | 3 | 21 | 475 | 28 | 463 | 5.23e-64 | 214 |
MS.gene73451.t1 | MTR_6g047640 | 32.166 | 457 | 306 | 2 | 21 | 475 | 28 | 482 | 8.20e-64 | 214 |
MS.gene73451.t1 | MTR_8g102430 | 27.646 | 463 | 314 | 3 | 1 | 463 | 1 | 442 | 1.20e-61 | 207 |
MS.gene73451.t1 | MTR_3g099720 | 29.954 | 434 | 303 | 1 | 25 | 458 | 42 | 474 | 1.84e-61 | 208 |
MS.gene73451.t1 | MTR_6g047610 | 31.155 | 459 | 311 | 3 | 21 | 477 | 28 | 483 | 1.99e-61 | 208 |
MS.gene73451.t1 | MTR_2g078990 | 37.919 | 298 | 175 | 3 | 165 | 457 | 1 | 293 | 8.90e-60 | 199 |
MS.gene73451.t1 | MTR_6g027190 | 32.484 | 471 | 305 | 7 | 1 | 466 | 3 | 465 | 1.37e-57 | 198 |
MS.gene73451.t1 | MTR_6g047590 | 31.544 | 447 | 301 | 3 | 21 | 466 | 28 | 470 | 1.67e-56 | 195 |
MS.gene73451.t1 | MTR_4g027920 | 30.238 | 463 | 307 | 9 | 24 | 475 | 156 | 613 | 1.78e-56 | 198 |
MS.gene73451.t1 | MTR_6g027200 | 29.847 | 459 | 315 | 3 | 9 | 466 | 25 | 477 | 1.50e-55 | 193 |
MS.gene73451.t1 | MTR_2g435930 | 28.200 | 461 | 313 | 2 | 23 | 466 | 18 | 477 | 2.08e-53 | 187 |
MS.gene73451.t1 | MTR_5g090280 | 30.070 | 429 | 255 | 6 | 83 | 478 | 1 | 417 | 9.52e-46 | 165 |
MS.gene73451.t1 | MTR_5g011540 | 29.241 | 448 | 302 | 5 | 24 | 463 | 43 | 483 | 3.94e-45 | 165 |
MS.gene73451.t1 | MTR_2g079030 | 38.660 | 194 | 119 | 0 | 264 | 457 | 320 | 513 | 2.78e-38 | 147 |
MS.gene73451.t1 | MTR_7g007430 | 39.623 | 106 | 55 | 3 | 310 | 415 | 16 | 112 | 6.70e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73451.t1 | AT1G71140 | 61.834 | 469 | 175 | 2 | 2 | 469 | 5 | 470 | 0.0 | 588 |
MS.gene73451.t1 | AT1G15150 | 55.054 | 465 | 207 | 1 | 15 | 477 | 21 | 485 | 0.0 | 535 |
MS.gene73451.t1 | AT1G15160 | 54.088 | 477 | 212 | 2 | 8 | 477 | 9 | 485 | 0.0 | 530 |
MS.gene73451.t1 | AT1G15170 | 56.170 | 470 | 198 | 2 | 2 | 466 | 9 | 475 | 0.0 | 529 |
MS.gene73451.t1 | AT1G15180 | 56.236 | 457 | 195 | 1 | 15 | 466 | 20 | 476 | 1.04e-176 | 504 |
MS.gene73451.t1 | AT2G04080 | 48.504 | 468 | 239 | 1 | 1 | 466 | 1 | 468 | 8.51e-158 | 456 |
MS.gene73451.t1 | AT2G04100 | 48.620 | 471 | 237 | 2 | 1 | 466 | 1 | 471 | 2.22e-156 | 453 |
MS.gene73451.t1 | AT2G04070 | 48.504 | 468 | 239 | 1 | 1 | 466 | 1 | 468 | 1.52e-155 | 451 |
MS.gene73451.t1 | AT2G04090 | 48.195 | 471 | 239 | 1 | 1 | 466 | 1 | 471 | 4.22e-155 | 449 |
MS.gene73451.t1 | AT1G66760 | 48.305 | 472 | 240 | 1 | 7 | 478 | 14 | 481 | 4.77e-155 | 449 |
MS.gene73451.t1 | AT2G04080 | 48.261 | 460 | 236 | 1 | 1 | 458 | 1 | 460 | 1.09e-154 | 448 |
MS.gene73451.t1 | AT2G04100 | 48.380 | 463 | 234 | 2 | 1 | 458 | 1 | 463 | 6.62e-153 | 444 |
MS.gene73451.t1 | AT2G04050 | 48.225 | 479 | 242 | 2 | 1 | 477 | 1 | 475 | 1.04e-152 | 443 |
MS.gene73451.t1 | AT1G66780 | 49.784 | 462 | 232 | 0 | 7 | 468 | 17 | 478 | 2.55e-152 | 442 |
MS.gene73451.t1 | AT2G04040 | 47.599 | 479 | 245 | 2 | 1 | 477 | 1 | 475 | 2.63e-151 | 440 |
MS.gene73451.t1 | AT1G66760 | 48.026 | 456 | 233 | 1 | 7 | 462 | 14 | 465 | 7.36e-150 | 436 |
MS.gene73451.t1 | AT1G15150 | 55.464 | 366 | 161 | 1 | 114 | 477 | 4 | 369 | 1.33e-148 | 429 |
MS.gene73451.t1 | AT1G15170 | 58.074 | 353 | 148 | 0 | 114 | 466 | 4 | 356 | 1.60e-148 | 428 |
MS.gene73451.t1 | AT1G64820 | 46.861 | 446 | 237 | 0 | 23 | 468 | 27 | 472 | 7.94e-147 | 429 |
MS.gene73451.t1 | AT5G52450 | 47.826 | 483 | 242 | 2 | 6 | 478 | 1 | 483 | 1.59e-145 | 425 |
MS.gene73451.t1 | AT1G73700 | 49.436 | 443 | 224 | 0 | 24 | 466 | 23 | 465 | 3.74e-145 | 424 |
MS.gene73451.t1 | AT2G34360 | 46.288 | 458 | 233 | 3 | 9 | 465 | 16 | 461 | 4.67e-136 | 401 |
MS.gene73451.t1 | AT1G66760 | 47.656 | 384 | 197 | 1 | 7 | 390 | 14 | 393 | 8.81e-119 | 353 |
MS.gene73451.t1 | AT2G34360 | 40.919 | 457 | 217 | 2 | 9 | 465 | 16 | 419 | 5.63e-115 | 345 |
MS.gene73451.t1 | AT1G66760 | 49.254 | 335 | 170 | 0 | 128 | 462 | 3 | 337 | 7.39e-110 | 329 |
MS.gene73451.t1 | AT1G15180 | 55.596 | 277 | 123 | 0 | 114 | 390 | 4 | 280 | 3.91e-105 | 319 |
MS.gene73451.t1 | AT3G23560 | 37.199 | 457 | 278 | 2 | 7 | 457 | 18 | 471 | 3.64e-95 | 296 |
MS.gene73451.t1 | AT1G61890 | 35.135 | 444 | 288 | 0 | 25 | 468 | 47 | 490 | 6.62e-94 | 293 |
MS.gene73451.t1 | AT3G23550 | 36.105 | 457 | 284 | 2 | 7 | 457 | 9 | 463 | 3.12e-93 | 291 |
MS.gene73451.t1 | AT1G61890 | 34.590 | 451 | 295 | 0 | 8 | 458 | 30 | 480 | 1.13e-92 | 290 |
MS.gene73451.t1 | AT1G11670 | 35.360 | 444 | 287 | 0 | 25 | 468 | 50 | 493 | 1.12e-89 | 283 |
MS.gene73451.t1 | AT3G21690 | 35.862 | 435 | 279 | 0 | 32 | 466 | 59 | 493 | 2.99e-89 | 281 |
MS.gene73451.t1 | AT4G21910 | 36.771 | 446 | 273 | 4 | 25 | 466 | 57 | 497 | 4.30e-86 | 273 |
MS.gene73451.t1 | AT4G21910 | 36.771 | 446 | 273 | 4 | 25 | 466 | 57 | 497 | 4.30e-86 | 273 |
MS.gene73451.t1 | AT4G21910 | 36.099 | 446 | 276 | 4 | 25 | 466 | 55 | 495 | 7.51e-85 | 270 |
MS.gene73451.t1 | AT4G21910 | 36.099 | 446 | 276 | 4 | 25 | 466 | 55 | 495 | 7.51e-85 | 270 |
MS.gene73451.t1 | AT4G21903 | 35.084 | 419 | 271 | 1 | 48 | 466 | 76 | 493 | 4.94e-83 | 265 |
MS.gene73451.t1 | AT1G61890 | 34.360 | 422 | 277 | 0 | 8 | 429 | 30 | 451 | 9.86e-83 | 264 |
MS.gene73451.t1 | AT1G12950 | 33.407 | 455 | 302 | 1 | 22 | 476 | 64 | 517 | 1.12e-81 | 262 |
MS.gene73451.t1 | AT4G21903 | 34.606 | 419 | 273 | 1 | 48 | 466 | 76 | 493 | 1.92e-81 | 261 |
MS.gene73451.t1 | AT4G21903 | 35.677 | 384 | 247 | 0 | 83 | 466 | 1 | 384 | 6.06e-80 | 254 |
MS.gene73451.t1 | AT5G38030 | 32.823 | 457 | 306 | 1 | 22 | 478 | 42 | 497 | 6.35e-80 | 257 |
MS.gene73451.t1 | AT3G59030 | 34.423 | 459 | 299 | 1 | 10 | 466 | 34 | 492 | 1.58e-79 | 256 |
MS.gene73451.t1 | AT3G26590 | 33.185 | 449 | 299 | 1 | 22 | 470 | 42 | 489 | 1.80e-79 | 256 |
MS.gene73451.t1 | AT1G47530 | 35.242 | 454 | 293 | 1 | 22 | 475 | 32 | 484 | 3.86e-79 | 254 |
MS.gene73451.t1 | AT1G23300 | 36.105 | 457 | 287 | 3 | 22 | 476 | 41 | 494 | 3.60e-78 | 253 |
MS.gene73451.t1 | AT5G44050 | 33.557 | 447 | 287 | 4 | 25 | 466 | 40 | 481 | 8.05e-74 | 241 |
MS.gene73451.t1 | AT1G71870 | 30.672 | 476 | 310 | 6 | 6 | 462 | 5 | 479 | 1.19e-72 | 238 |
MS.gene73451.t1 | AT5G65380 | 33.406 | 461 | 300 | 3 | 7 | 466 | 24 | 478 | 5.24e-72 | 236 |
MS.gene73451.t1 | AT1G33110 | 33.543 | 477 | 310 | 4 | 2 | 478 | 18 | 487 | 7.65e-72 | 236 |
MS.gene73451.t1 | AT1G33090 | 31.957 | 460 | 308 | 2 | 7 | 466 | 22 | 476 | 9.45e-72 | 236 |
MS.gene73451.t1 | AT1G33100 | 33.186 | 452 | 297 | 2 | 7 | 458 | 19 | 465 | 1.13e-71 | 235 |
MS.gene73451.t1 | AT5G19700 | 31.333 | 450 | 309 | 0 | 24 | 473 | 35 | 484 | 2.84e-70 | 232 |
MS.gene73451.t1 | AT1G47530 | 35.878 | 393 | 251 | 1 | 83 | 475 | 1 | 392 | 3.99e-70 | 228 |
MS.gene73451.t1 | AT1G58340 | 31.544 | 447 | 304 | 2 | 23 | 468 | 56 | 501 | 4.94e-70 | 232 |
MS.gene73451.t1 | AT5G10420 | 32.462 | 459 | 304 | 3 | 9 | 466 | 26 | 479 | 5.62e-70 | 231 |
MS.gene73451.t1 | AT3G23560 | 35.128 | 390 | 244 | 2 | 7 | 390 | 18 | 404 | 1.00e-68 | 225 |
MS.gene73451.t1 | AT3G26590 | 33.505 | 388 | 257 | 1 | 83 | 470 | 1 | 387 | 1.57e-68 | 224 |
MS.gene73451.t1 | AT4G29140 | 29.605 | 456 | 319 | 1 | 23 | 478 | 54 | 507 | 1.75e-68 | 228 |
MS.gene73451.t1 | AT1G33080 | 31.983 | 469 | 309 | 5 | 8 | 475 | 22 | 481 | 6.41e-67 | 223 |
MS.gene73451.t1 | AT4G00350 | 33.850 | 452 | 293 | 3 | 21 | 470 | 84 | 531 | 7.43e-67 | 224 |
MS.gene73451.t1 | AT1G33080 | 31.739 | 460 | 308 | 3 | 8 | 466 | 22 | 476 | 4.04e-66 | 221 |
MS.gene73451.t1 | AT5G52050 | 29.032 | 465 | 324 | 1 | 5 | 463 | 15 | 479 | 4.11e-64 | 216 |
MS.gene73451.t1 | AT2G38510 | 30.700 | 443 | 304 | 3 | 24 | 464 | 5 | 446 | 4.22e-64 | 215 |
MS.gene73451.t1 | AT4G23030 | 32.511 | 446 | 294 | 3 | 23 | 464 | 30 | 472 | 4.94e-64 | 216 |
MS.gene73451.t1 | AT4G25640 | 32.667 | 450 | 301 | 1 | 21 | 470 | 30 | 477 | 6.44e-60 | 204 |
MS.gene73451.t1 | AT4G25640 | 32.667 | 450 | 301 | 1 | 21 | 470 | 30 | 477 | 9.87e-60 | 204 |
MS.gene73451.t1 | AT3G59030 | 32.898 | 383 | 255 | 1 | 10 | 390 | 34 | 416 | 1.02e-57 | 197 |
MS.gene73451.t1 | AT3G03620 | 30.407 | 467 | 310 | 5 | 9 | 466 | 17 | 477 | 1.43e-56 | 196 |
MS.gene73451.t1 | AT3G03620 | 30.407 | 467 | 310 | 5 | 9 | 466 | 17 | 477 | 1.43e-56 | 196 |
MS.gene73451.t1 | AT4G25640 | 32.587 | 402 | 269 | 1 | 21 | 422 | 30 | 429 | 7.12e-54 | 187 |
MS.gene73451.t1 | AT5G17700 | 29.895 | 475 | 316 | 7 | 1 | 466 | 8 | 474 | 4.12e-53 | 186 |
MS.gene73451.t1 | AT5G17700 | 29.895 | 475 | 316 | 7 | 1 | 466 | 8 | 474 | 4.12e-53 | 186 |
MS.gene73451.t1 | AT5G49130 | 29.032 | 465 | 302 | 9 | 23 | 466 | 24 | 481 | 4.15e-53 | 186 |
MS.gene73451.t1 | AT1G33110 | 31.795 | 390 | 260 | 3 | 2 | 391 | 18 | 401 | 5.64e-49 | 173 |
MS.gene73451.t1 | AT4G22790 | 28.090 | 445 | 306 | 6 | 23 | 459 | 28 | 466 | 8.20e-48 | 172 |
MS.gene73451.t1 | AT2G04066 | 48.780 | 123 | 63 | 0 | 344 | 466 | 41 | 163 | 4.66e-38 | 137 |
MS.gene73451.t1 | AT5G17700 | 28.571 | 399 | 268 | 7 | 1 | 390 | 8 | 398 | 2.76e-35 | 136 |
Find 92 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCTGCTATATTGGGTTTC+TGG | 0.054525 | 1.4:+83514959 | MS.gene73451:CDS |
GAGCTCCTAGTCTTTCTTTC+TGG | 0.112671 | 1.4:+83514150 | MS.gene73451:CDS |
AATTCCAATTGCTGCTATAT+TGG | 0.198673 | 1.4:+83514951 | MS.gene73451:CDS |
AGTTTACATGGTACCCTTTC+AGG | 0.227806 | 1.4:+83514746 | MS.gene73451:CDS |
GCTGCTGAGCCAGTTGCTTC+TGG | 0.243748 | 1.4:-83514385 | None:intergenic |
CGCAGTTTCTGAGGCTATAT+TGG | 0.244896 | 1.4:+83514604 | MS.gene73451:CDS |
AGTTTGTAAAACTTGTTATA+AGG | 0.265767 | 1.4:-83515053 | None:intergenic |
TCTTTGATTGCAGGCAATTT+TGG | 0.273791 | 1.4:+83515697 | MS.gene73451:intron |
AATTGAGAGGAAAAGGTCTT+TGG | 0.277505 | 1.4:+83514986 | MS.gene73451:CDS |
ATTCCAATTGCTGCTATATT+GGG | 0.299327 | 1.4:+83514952 | MS.gene73451:CDS |
CTCTCTATTGTGGCTCAACT+TGG | 0.315498 | 1.4:+83513624 | MS.gene73451:CDS |
AATGATGATGGTTGGTCATT+TGG | 0.337881 | 1.4:+83513174 | MS.gene73451:CDS |
GTTTGTAAAACTTGTTATAA+GGG | 0.343854 | 1.4:-83515052 | None:intergenic |
ATCTCTCTTTGTGCTGTCTC+TGG | 0.354104 | 1.4:+83513229 | MS.gene73451:CDS |
TTCCTTCAGCTGGAATGATT+TGG | 0.357308 | 1.4:+83514025 | MS.gene73451:CDS |
TTCGCCTCTCGACGGGTGTT+AGG | 0.359688 | 1.4:+83514641 | MS.gene73451:CDS |
GAAGTTTCAAGCTGTGGATT+TGG | 0.366799 | 1.4:-83514180 | None:intergenic |
CAGCTTCTTGTGAAATCAAC+CGG | 0.370651 | 1.4:-83513675 | None:intergenic |
CTTGTGAAATCAACCGGTCT+TGG | 0.372421 | 1.4:-83513669 | None:intergenic |
TTTCTATTGGCACTTCATAC+TGG | 0.376413 | 1.4:+83513887 | MS.gene73451:CDS |
CGCTATGCTATTCCTTCAGC+TGG | 0.379288 | 1.4:+83514015 | MS.gene73451:CDS |
GCAAGAGTTTCAAATGCATT+AGG | 0.381595 | 1.4:+83514530 | MS.gene73451:CDS |
ACTCAATGCGGACAAGCTTA+TGG | 0.385550 | 1.4:+83513526 | MS.gene73451:CDS |
ACAAATTATTTCAATGATGA+TGG | 0.391749 | 1.4:+83513162 | MS.gene73451:CDS |
GCAAAGCAATATAGAAAATT+CGG | 0.403587 | 1.4:+83513550 | MS.gene73451:CDS |
ATGATGATGGTTGGTCATTT+GGG | 0.404709 | 1.4:+83513175 | MS.gene73451:CDS |
GAGGAAAAGGTCTTTGGATT+GGG | 0.408289 | 1.4:+83514992 | MS.gene73451:CDS |
AAATCTGGATTAGGTAGCTT+AGG | 0.409316 | 1.4:+83513856 | MS.gene73451:CDS |
AGAGGAAAAGGTCTTTGGAT+TGG | 0.409324 | 1.4:+83514991 | MS.gene73451:CDS |
TGGGCTAGAAAATATGGAAA+AGG | 0.417099 | 1.4:+83513012 | None:intergenic |
AACTCGGGTTACAATTTCAA+TGG | 0.418595 | 1.4:+83513963 | MS.gene73451:CDS |
AAACCCAATATAGCAGCAAT+TGG | 0.424348 | 1.4:-83514955 | None:intergenic |
ATAAGTTCCTCTGTTACCCT+TGG | 0.428057 | 1.4:+83513799 | MS.gene73451:CDS |
TGGTTTGAATTGAGAGGAAA+AGG | 0.430282 | 1.4:+83514979 | MS.gene73451:CDS |
TCTCTATTGTGGCTCAACTT+GGG | 0.430995 | 1.4:+83513625 | MS.gene73451:CDS |
ATGGAGTCATTCACTGGAAT+AGG | 0.431417 | 1.4:+83513982 | MS.gene73451:CDS |
GGGAAGTTACTGAGTTTACT+TGG | 0.438885 | 1.4:+83513646 | MS.gene73451:CDS |
CTTTGGATTGGGATAATTGT+TGG | 0.439016 | 1.4:+83515003 | MS.gene73451:CDS |
GGATGTGGTTGGCAGAAGTC+AGG | 0.439503 | 1.4:+83514892 | MS.gene73451:CDS |
TTGATCATTTCAGCTTTGAA+TGG | 0.444548 | 1.4:+83514118 | MS.gene73451:intron |
GTTCAAGAGGTGAAAGATGT+TGG | 0.445298 | 1.4:+83513091 | MS.gene73451:CDS |
GTTATACCATATGGATAAAA+CGG | 0.456062 | 1.4:-83514202 | None:intergenic |
GATAAGTCTATCTGTTATAG+TGG | 0.466610 | 1.4:+83514721 | MS.gene73451:CDS |
ATAGGTATTGCTAGAGGATG+TGG | 0.480532 | 1.4:+83514877 | MS.gene73451:intron |
ATTTCAATGGAGTCATTCAC+TGG | 0.481478 | 1.4:+83513976 | MS.gene73451:CDS |
GGGCTAGAAAATATGGAAAA+GGG | 0.483348 | 1.4:+83513013 | None:intergenic |
CTCTATTGTGGCTCAACTTG+GGG | 0.483519 | 1.4:+83513626 | MS.gene73451:CDS |
GGATAGCAAAACTGCTTGAC+AGG | 0.491733 | 1.4:-83515031 | None:intergenic |
GTTTCAAATGCATTAGGAGC+TGG | 0.493198 | 1.4:+83514536 | MS.gene73451:CDS |
CCGTCGAGAGGCGAAAATGA+TGG | 0.496382 | 1.4:-83514633 | None:intergenic |
TATACAATTCCAGAAGCAAC+TGG | 0.498567 | 1.4:+83514376 | MS.gene73451:CDS |
ATTATTTCAATGATGATGGT+TGG | 0.500723 | 1.4:+83513166 | MS.gene73451:CDS |
TGGTTGAATGTGATTATCCT+TGG | 0.502212 | 1.4:+83513907 | MS.gene73451:CDS |
CGGTTGATTTCACAAGAAGC+TGG | 0.504249 | 1.4:+83513676 | MS.gene73451:CDS |
GTGTTCCTCTCTCTCTATTG+TGG | 0.509727 | 1.4:+83513614 | MS.gene73451:CDS |
AGTGAAGAGCCAACCTGAAA+GGG | 0.512365 | 1.4:-83514759 | None:intergenic |
GACAAAGTTACACTAATCAT+AGG | 0.512463 | 1.4:-83513127 | None:intergenic |
ATCATTTCAGCTTTGAATGG+TGG | 0.515417 | 1.4:+83514121 | MS.gene73451:intron |
TGAGTTTACTTGGCCAAGAC+CGG | 0.516073 | 1.4:+83513656 | MS.gene73451:CDS |
TTATATATTTAGCAATGAGC+AGG | 0.516377 | 1.4:+83514664 | MS.gene73451:CDS |
TTATGCAACTCTTCAGGCAC+TGG | 0.518233 | 1.4:+83513735 | MS.gene73451:CDS |
AAAACGGAAGTTTCAAGCTG+TGG | 0.540446 | 1.4:-83514186 | None:intergenic |
GTTATAGTGGATAGTTTACA+TGG | 0.546582 | 1.4:+83514734 | MS.gene73451:CDS |
GGTTTCTGGTTTGAATTGAG+AGG | 0.547543 | 1.4:+83514973 | MS.gene73451:CDS |
AAGTGAAGAGCCAACCTGAA+AGG | 0.553559 | 1.4:-83514760 | None:intergenic |
TTGAGCCACAATAGAGAGAG+AGG | 0.556374 | 1.4:-83513619 | None:intergenic |
ATGGGGTGTATTTGTTCAAG+AGG | 0.559648 | 1.4:+83513078 | MS.gene73451:CDS |
GGTGGAGTATGTCACAGATA+TGG | 0.560664 | 1.4:+83514691 | MS.gene73451:CDS |
ATTGTCTGTCTATGCTGCTA+TGG | 0.563212 | 1.4:+83514577 | MS.gene73451:CDS |
CACCAAATCATTCCAGCTGA+AGG | 0.565508 | 1.4:-83514027 | None:intergenic |
CGGGAAAGGATATTTCAAGA+AGG | 0.568207 | 1.4:+83515722 | MS.gene73451:CDS |
TTAGAGAAAGACAGAGAAGG+TGG | 0.570704 | 1.4:+83513040 | MS.gene73451:CDS |
TCAGGAGCATATGTGAACCT+TGG | 0.571235 | 1.4:+83514910 | MS.gene73451:CDS |
ATTTAGCAATGAGCAGGATG+TGG | 0.575627 | 1.4:+83514670 | MS.gene73451:CDS |
TATGGCTATCGCAGTTTCTG+AGG | 0.590003 | 1.4:+83514595 | MS.gene73451:CDS |
ACAGACAATCGTGCTGCGTG+TGG | 0.597992 | 1.4:-83514563 | None:intergenic |
TTGTTAGAGAAAGACAGAGA+AGG | 0.598771 | 1.4:+83513037 | MS.gene73451:CDS |
TAGCAATGAGCAGGATGTGG+TGG | 0.608741 | 1.4:+83514673 | MS.gene73451:CDS |
ACAGAGGAACTTATAACAAG+AGG | 0.610630 | 1.4:-83513790 | None:intergenic |
GTGGTTCAAGAAGCATAACA+TGG | 0.612250 | 1.4:+83513059 | MS.gene73451:CDS |
ATAACCTAACACCCGTCGAG+AGG | 0.620438 | 1.4:-83514645 | None:intergenic |
TCTATTATAGGTATTGCTAG+AGG | 0.626271 | 1.4:+83514871 | MS.gene73451:intron |
AAGCAACTGGCTCAGCAGCA+AGG | 0.628073 | 1.4:+83514389 | MS.gene73451:CDS |
GAAGACCAGAAAGAAAGACT+AGG | 0.630328 | 1.4:-83514155 | None:intergenic |
TGGTTCAAGAAGCATAACAT+GGG | 0.635705 | 1.4:+83513060 | MS.gene73451:CDS |
AAAAGCTACATGGAATCCAA+GGG | 0.647250 | 1.4:-83513815 | None:intergenic |
ATGGAATCCAAGGGTAACAG+AGG | 0.649163 | 1.4:-83513806 | None:intergenic |
TAGCAAAACTGCTTGACAGG+AGG | 0.664773 | 1.4:-83515028 | None:intergenic |
GTATTGCTAGAGGATGTGGT+TGG | 0.678617 | 1.4:+83514881 | MS.gene73451:CDS |
ATAACAGATAGACTTATCAG+AGG | 0.687739 | 1.4:-83514716 | None:intergenic |
GGTTCAAGAAGCATAACATG+GGG | 0.725878 | 1.4:+83513061 | MS.gene73451:CDS |
TGTGCACTTGAAACTCAATG+CGG | 0.793392 | 1.4:+83513514 | MS.gene73451:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAAAAATTTGTATTGTAA+TGG | + | chr1.4:83514266-83514285 | MS.gene73451:intron | 10.0% |
!! | GTTTAGTATAAAAATCTAAT+GGG | + | chr1.4:83515481-83515500 | MS.gene73451:intron | 15.0% |
!!! | AATGAGTATATTTTAATGAA+CGG | - | chr1.4:83515668-83515687 | None:intergenic | 15.0% |
!!! | AGAATTTTATATATAATCCA+AGG | - | chr1.4:83513927-83513946 | None:intergenic | 15.0% |
!! | AATCATAGCTAAAAATTAAC+AGG | - | chr1.4:83514084-83514103 | None:intergenic | 20.0% |
!! | ACAAATTATTTCAATGATGA+TGG | + | chr1.4:83513162-83513181 | MS.gene73451:CDS | 20.0% |
!! | ATCATAGCTAAAAATTAACA+GGG | - | chr1.4:83514083-83514102 | None:intergenic | 20.0% |
!! | GGTTTAGTATAAAAATCTAA+TGG | + | chr1.4:83515480-83515499 | MS.gene73451:intron | 20.0% |
!! | TCAACACTAATTTATAAGAA+TGG | - | chr1.4:83514315-83514334 | None:intergenic | 20.0% |
!! | TGGAATTCCAAAAATATAAT+AGG | - | chr1.4:83514938-83514957 | None:intergenic | 20.0% |
!!! | AGTTTGTAAAACTTGTTATA+AGG | - | chr1.4:83515056-83515075 | None:intergenic | 20.0% |
!!! | ATTTGTGTTTTTAGAGTAAA+CGG | - | chr1.4:83515375-83515394 | None:intergenic | 20.0% |
!!! | CATTTTTTTCATGAAATTCA+TGG | + | chr1.4:83514813-83514832 | MS.gene73451:intron | 20.0% |
!!! | GTTTGTAAAACTTGTTATAA+GGG | - | chr1.4:83515055-83515074 | None:intergenic | 20.0% |
!!! | TATAACAAGTTTTACAAACT+GGG | + | chr1.4:83515056-83515075 | MS.gene73451:CDS | 20.0% |
!!! | TGGTTATTAGTTTTTAAATC+TGG | + | chr1.4:83513841-83513860 | MS.gene73451:CDS | 20.0% |
!!! | TTAGTTTTTAAATCTGGATT+AGG | + | chr1.4:83513847-83513866 | MS.gene73451:CDS | 20.0% |
!!! | TTATAACAAGTTTTACAAAC+TGG | + | chr1.4:83515055-83515074 | MS.gene73451:CDS | 20.0% |
! | AGAATCTTAATAAGATAGCA+TGG | - | chr1.4:83515625-83515644 | None:intergenic | 25.0% |
! | ATATAATATCAAGGGAAAAG+AGG | - | chr1.4:83513274-83513293 | None:intergenic | 25.0% |
! | ATGTAACACTTGTCTATTAT+AGG | + | chr1.4:83514859-83514878 | MS.gene73451:intron | 25.0% |
! | ATGTGTAAAACTAAACACTA+GGG | - | chr1.4:83514231-83514250 | None:intergenic | 25.0% |
! | ATTATTTGCATCAAATCGAA+TGG | + | chr1.4:83513431-83513450 | MS.gene73451:intron | 25.0% |
! | CAAAAATATAATAGGATCCA+AGG | - | chr1.4:83514930-83514949 | None:intergenic | 25.0% |
! | CTTTGTTCTTTAAATAAGTG+AGG | + | chr1.4:83515170-83515189 | MS.gene73451:intron | 25.0% |
! | GCAAAGCAATATAGAAAATT+CGG | + | chr1.4:83513550-83513569 | MS.gene73451:CDS | 25.0% |
! | GTTATACCATATGGATAAAA+CGG | - | chr1.4:83514205-83514224 | None:intergenic | 25.0% |
! | TGGAGTCTATATAATATCAA+GGG | - | chr1.4:83513282-83513301 | None:intergenic | 25.0% |
! | TTATATATTTAGCAATGAGC+AGG | + | chr1.4:83514664-83514683 | MS.gene73451:CDS | 25.0% |
! | TTGGAGTCTATATAATATCA+AGG | - | chr1.4:83513283-83513302 | None:intergenic | 25.0% |
! | TTTGTACATATCAAACAGTT+TGG | + | chr1.4:83513484-83513503 | MS.gene73451:intron | 25.0% |
!! | ATGTCTTTTGTTAGTCAATT+TGG | + | chr1.4:83515275-83515294 | MS.gene73451:intron | 25.0% |
!! | CTTGGATCCTATTATATTTT+TGG | + | chr1.4:83514928-83514947 | MS.gene73451:CDS | 25.0% |
!! | TGTCAAGCTAATTATTTTCA+AGG | + | chr1.4:83515541-83515560 | MS.gene73451:intron | 25.0% |
!!! | ATTATTTCAATGATGATGGT+TGG | + | chr1.4:83513166-83513185 | MS.gene73451:CDS | 25.0% |
AATTCCAATTGCTGCTATAT+TGG | + | chr1.4:83514951-83514970 | MS.gene73451:CDS | 30.0% | |
ATAACAGATAGACTTATCAG+AGG | - | chr1.4:83514719-83514738 | None:intergenic | 30.0% | |
ATAACCAACAAAAAGCTACA+TGG | - | chr1.4:83513828-83513847 | None:intergenic | 30.0% | |
ATAGACTCCAATATCATATC+AGG | + | chr1.4:83513292-83513311 | MS.gene73451:intron | 30.0% | |
ATAGCTAAAAATTAACAGGG+AGG | - | chr1.4:83514080-83514099 | None:intergenic | 30.0% | |
ATGTGTATGCACAAATTGAA+TGG | - | chr1.4:83514438-83514457 | None:intergenic | 30.0% | |
ATTCCAATTGCTGCTATATT+GGG | + | chr1.4:83514952-83514971 | MS.gene73451:CDS | 30.0% | |
ATTCCATGTCATAATCATTC+AGG | - | chr1.4:83514841-83514860 | None:intergenic | 30.0% | |
CATGTGTAAAACTAAACACT+AGG | - | chr1.4:83514232-83514251 | None:intergenic | 30.0% | |
GACAAAGTTACACTAATCAT+AGG | - | chr1.4:83513130-83513149 | None:intergenic | 30.0% | |
GATAAGTCTATCTGTTATAG+TGG | + | chr1.4:83514721-83514740 | MS.gene73451:CDS | 30.0% | |
TGGAAAACCTGATATGATAT+TGG | - | chr1.4:83513302-83513321 | None:intergenic | 30.0% | |
TGTGTATGCACAAATTGAAT+GGG | - | chr1.4:83514437-83514456 | None:intergenic | 30.0% | |
! | AAACTTCCGTTTTATCCATA+TGG | + | chr1.4:83514196-83514215 | MS.gene73451:CDS | 30.0% |
! | CAGATTTTCTCTTTTCAACA+TGG | - | chr1.4:83515399-83515418 | None:intergenic | 30.0% |
! | GATATTTCAAGAAGGTTTTG+TGG | + | chr1.4:83515730-83515749 | MS.gene73451:CDS | 30.0% |
! | TCTATTATAGGTATTGCTAG+AGG | + | chr1.4:83514871-83514890 | MS.gene73451:intron | 30.0% |
! | TTTTACAAACTGGGAAAAAC+AGG | + | chr1.4:83515065-83515084 | MS.gene73451:CDS | 30.0% |
!! | GATGTTTTTATACGTTATGC+TGG | - | chr1.4:83513322-83513341 | None:intergenic | 30.0% |
!! | GCTATTTCTTTGTTTGTGTT+TGG | + | chr1.4:83514481-83514500 | MS.gene73451:intron | 30.0% |
!! | GTTATAGTGGATAGTTTACA+TGG | + | chr1.4:83514734-83514753 | MS.gene73451:CDS | 30.0% |
!! | TTGATCATTTCAGCTTTGAA+TGG | + | chr1.4:83514118-83514137 | MS.gene73451:intron | 30.0% |
!!! | CTAGTGTTTAGTTTTACACA+TGG | + | chr1.4:83514230-83514249 | MS.gene73451:intron | 30.0% |
AAAAAGCTACATGGAATCCA+AGG | - | chr1.4:83513819-83513838 | None:intergenic | 35.0% | |
AAAAGCTACATGGAATCCAA+GGG | - | chr1.4:83513818-83513837 | None:intergenic | 35.0% | |
AAACCCAATATAGCAGCAAT+TGG | - | chr1.4:83514958-83514977 | None:intergenic | 35.0% | |
AACTCGGGTTACAATTTCAA+TGG | + | chr1.4:83513963-83513982 | MS.gene73451:CDS | 35.0% | |
AATACCAACTTGTAAGCTGA+AGG | - | chr1.4:83515446-83515465 | None:intergenic | 35.0% | |
AATTGAGAGGAAAAGGTCTT+TGG | + | chr1.4:83514986-83515005 | MS.gene73451:CDS | 35.0% | |
ACAGAGGAACTTATAACAAG+AGG | - | chr1.4:83513793-83513812 | None:intergenic | 35.0% | |
ATAAGATTTAAGAGGAGGGA+GGG | - | chr1.4:83514057-83514076 | None:intergenic | 35.0% | |
ATACCAACTTGTAAGCTGAA+GGG | - | chr1.4:83515445-83515464 | None:intergenic | 35.0% | |
ATTTCAATGGAGTCATTCAC+TGG | + | chr1.4:83513976-83513995 | MS.gene73451:CDS | 35.0% | |
CTAGGGAAAGTTATACCATA+TGG | - | chr1.4:83514214-83514233 | None:intergenic | 35.0% | |
GAGGATAAGATTTAAGAGGA+GGG | - | chr1.4:83514061-83514080 | None:intergenic | 35.0% | |
GCAAGAGTTTCAAATGCATT+AGG | + | chr1.4:83514530-83514549 | MS.gene73451:CDS | 35.0% | |
TATACAATTCCAGAAGCAAC+TGG | + | chr1.4:83514376-83514395 | MS.gene73451:CDS | 35.0% | |
TGGTTGAATGTGATTATCCT+TGG | + | chr1.4:83513907-83513926 | MS.gene73451:CDS | 35.0% | |
TGGTTTGAATTGAGAGGAAA+AGG | + | chr1.4:83514979-83514998 | MS.gene73451:CDS | 35.0% | |
TGTTGAGATGATTGACAAAC+TGG | - | chr1.4:83514353-83514372 | None:intergenic | 35.0% | |
TTGTTAGAGAAAGACAGAGA+AGG | + | chr1.4:83513037-83513056 | MS.gene73451:CDS | 35.0% | |
TTTCTATTGGCACTTCATAC+TGG | + | chr1.4:83513887-83513906 | MS.gene73451:CDS | 35.0% | |
! | AAATCTGGATTAGGTAGCTT+AGG | + | chr1.4:83513856-83513875 | MS.gene73451:CDS | 35.0% |
! | CTGCTGATTGTGAAAAAACT+CGG | + | chr1.4:83513947-83513966 | MS.gene73451:CDS | 35.0% |
! | CTTTGGATTGGGATAATTGT+TGG | + | chr1.4:83515003-83515022 | MS.gene73451:CDS | 35.0% |
! | GATTCCATGTAGCTTTTTGT+TGG | + | chr1.4:83513821-83513840 | MS.gene73451:CDS | 35.0% |
! | TCTTTGATTGCAGGCAATTT+TGG | + | chr1.4:83515697-83515716 | MS.gene73451:intron | 35.0% |
! | TGCTGATTGTGAAAAAACTC+GGG | + | chr1.4:83513948-83513967 | MS.gene73451:CDS | 35.0% |
! | TGGTTCAAGAAGCATAACAT+GGG | + | chr1.4:83513060-83513079 | MS.gene73451:CDS | 35.0% |
! | TTAGGAGCTGCATTTTCTAT+TGG | + | chr1.4:83513874-83513893 | MS.gene73451:CDS | 35.0% |
! | TTTTGCTTATGCAACTCTTC+AGG | + | chr1.4:83513729-83513748 | MS.gene73451:CDS | 35.0% |
!! | AATGATGATGGTTGGTCATT+TGG | + | chr1.4:83513174-83513193 | MS.gene73451:CDS | 35.0% |
!! | ATCATTTCAGCTTTGAATGG+TGG | + | chr1.4:83514121-83514140 | MS.gene73451:intron | 35.0% |
!! | ATGATGATGGTTGGTCATTT+GGG | + | chr1.4:83513175-83513194 | MS.gene73451:CDS | 35.0% |
AAAACGGAAGTTTCAAGCTG+TGG | - | chr1.4:83514189-83514208 | None:intergenic | 40.0% | |
ACTCAGAGAACTAGCATCTT+AGG | + | chr1.4:83515599-83515618 | MS.gene73451:intron | 40.0% | |
AGAGGAAAAGGTCTTTGGAT+TGG | + | chr1.4:83514991-83515010 | MS.gene73451:CDS | 40.0% | |
AGTTTACATGGTACCCTTTC+AGG | + | chr1.4:83514746-83514765 | MS.gene73451:CDS | 40.0% | |
ATAAGTTCCTCTGTTACCCT+TGG | + | chr1.4:83513799-83513818 | MS.gene73451:CDS | 40.0% | |
ATACCCTTCAGCTTACAAGT+TGG | + | chr1.4:83515439-83515458 | MS.gene73451:intron | 40.0% | |
ATGGAGTCATTCACTGGAAT+AGG | + | chr1.4:83513982-83514001 | MS.gene73451:CDS | 40.0% | |
ATGGGGTGTATTTGTTCAAG+AGG | + | chr1.4:83513078-83513097 | MS.gene73451:CDS | 40.0% | |
ATTGTCTGTCTATGCTGCTA+TGG | + | chr1.4:83514577-83514596 | MS.gene73451:CDS | 40.0% | |
ATTTAGCAATGAGCAGGATG+TGG | + | chr1.4:83514670-83514689 | MS.gene73451:CDS | 40.0% | |
CAGCTTCTTGTGAAATCAAC+CGG | - | chr1.4:83513678-83513697 | None:intergenic | 40.0% | |
CAGGGAGGATAAGATTTAAG+AGG | - | chr1.4:83514065-83514084 | None:intergenic | 40.0% | |
CATAGCGCATCGCTTATTTA+GGG | + | chr1.4:83515339-83515358 | MS.gene73451:intron | 40.0% | |
CGGGAAAGGATATTTCAAGA+AGG | + | chr1.4:83515722-83515741 | MS.gene73451:CDS | 40.0% | |
GAAGACCAGAAAGAAAGACT+AGG | - | chr1.4:83514158-83514177 | None:intergenic | 40.0% | |
GAAGTTTCAAGCTGTGGATT+TGG | - | chr1.4:83514183-83514202 | None:intergenic | 40.0% | |
GAGGAAAAGGTCTTTGGATT+GGG | + | chr1.4:83514992-83515011 | MS.gene73451:CDS | 40.0% | |
GATAAGATTTAAGAGGAGGG+AGG | - | chr1.4:83514058-83514077 | None:intergenic | 40.0% | |
GATGATTGACAAACTGGTCA+TGG | - | chr1.4:83514347-83514366 | None:intergenic | 40.0% | |
GGAGGATAAGATTTAAGAGG+AGG | - | chr1.4:83514062-83514081 | None:intergenic | 40.0% | |
GGGAAGTTACTGAGTTTACT+TGG | + | chr1.4:83513646-83513665 | MS.gene73451:CDS | 40.0% | |
GTGACTTTCGTTAGTCAACT+TGG | + | chr1.4:83515243-83515262 | MS.gene73451:intron | 40.0% | |
GTGCCTGAATGATTATGACA+TGG | + | chr1.4:83514835-83514854 | MS.gene73451:intron | 40.0% | |
GTTCAAGAGGTGAAAGATGT+TGG | + | chr1.4:83513091-83513110 | MS.gene73451:CDS | 40.0% | |
GTTGCATAAGCAAAAAGAGC+AGG | - | chr1.4:83513724-83513743 | None:intergenic | 40.0% | |
GTTTCAAATGCATTAGGAGC+TGG | + | chr1.4:83514536-83514555 | MS.gene73451:CDS | 40.0% | |
TCATAGCGCATCGCTTATTT+AGG | + | chr1.4:83515338-83515357 | MS.gene73451:intron | 40.0% | |
TCTCTATTGTGGCTCAACTT+GGG | + | chr1.4:83513625-83513644 | MS.gene73451:CDS | 40.0% | |
TCTTGAGTGTCTTTGATTGC+AGG | + | chr1.4:83515688-83515707 | MS.gene73451:intron | 40.0% | |
TGGTATTGTGAGTATCAGTC+AGG | + | chr1.4:83515459-83515478 | MS.gene73451:intron | 40.0% | |
TGTGCACTTGAAACTCAATG+CGG | + | chr1.4:83513514-83513533 | MS.gene73451:CDS | 40.0% | |
TTAGAGAAAGACAGAGAAGG+TGG | + | chr1.4:83513040-83513059 | MS.gene73451:CDS | 40.0% | |
TTCCTTCAGCTGGAATGATT+TGG | + | chr1.4:83514025-83514044 | MS.gene73451:CDS | 40.0% | |
TTGCTGCTATATTGGGTTTC+TGG | + | chr1.4:83514959-83514978 | MS.gene73451:CDS | 40.0% | |
TTTACCTCTCTGTGCACATT+TGG | + | chr1.4:83515116-83515135 | MS.gene73451:intron | 40.0% | |
! | ATAGGTATTGCTAGAGGATG+TGG | + | chr1.4:83514877-83514896 | MS.gene73451:intron | 40.0% |
! | GGTTCAAGAAGCATAACATG+GGG | + | chr1.4:83513061-83513080 | MS.gene73451:CDS | 40.0% |
! | GTGGTTCAAGAAGCATAACA+TGG | + | chr1.4:83513059-83513078 | MS.gene73451:CDS | 40.0% |
! | TTTCTTGATCTGAGATGCTC+CGG | - | chr1.4:83515518-83515537 | None:intergenic | 40.0% |
!! | GGTTTCTGGTTTGAATTGAG+AGG | + | chr1.4:83514973-83514992 | MS.gene73451:CDS | 40.0% |
AAGTGAAGAGCCAACCTGAA+AGG | - | chr1.4:83514763-83514782 | None:intergenic | 45.0% | |
ACTCAATGCGGACAAGCTTA+TGG | + | chr1.4:83513526-83513545 | MS.gene73451:CDS | 45.0% | |
AGTGAAGAGCCAACCTGAAA+GGG | - | chr1.4:83514762-83514781 | None:intergenic | 45.0% | |
ATCTCTCTTTGTGCTGTCTC+TGG | + | chr1.4:83513229-83513248 | MS.gene73451:CDS | 45.0% | |
ATGGAATCCAAGGGTAACAG+AGG | - | chr1.4:83513809-83513828 | None:intergenic | 45.0% | |
CACCAAATCATTCCAGCTGA+AGG | - | chr1.4:83514030-83514049 | None:intergenic | 45.0% | |
CCAGAAAGACTTGGAAGTGA+AGG | - | chr1.4:83515095-83515114 | None:intergenic | 45.0% | |
CCTTCACTTCCAAGTCTTTC+TGG | + | chr1.4:83515092-83515111 | MS.gene73451:intron | 45.0% | |
CTCTATTGTGGCTCAACTTG+GGG | + | chr1.4:83513626-83513645 | MS.gene73451:CDS | 45.0% | |
CTCTCTATTGTGGCTCAACT+TGG | + | chr1.4:83513624-83513643 | MS.gene73451:CDS | 45.0% | |
CTTGTGAAATCAACCGGTCT+TGG | - | chr1.4:83513672-83513691 | None:intergenic | 45.0% | |
GAGGTAAAGCCAGAAAGACT+TGG | - | chr1.4:83515104-83515123 | None:intergenic | 45.0% | |
GGATAGCAAAACTGCTTGAC+AGG | - | chr1.4:83515034-83515053 | None:intergenic | 45.0% | |
GGTGGAGTATGTCACAGATA+TGG | + | chr1.4:83514691-83514710 | MS.gene73451:CDS | 45.0% | |
GTATTGCTAGAGGATGTGGT+TGG | + | chr1.4:83514881-83514900 | MS.gene73451:CDS | 45.0% | |
GTGTTCCTCTCTCTCTATTG+TGG | + | chr1.4:83513614-83513633 | MS.gene73451:CDS | 45.0% | |
TAGCAAAACTGCTTGACAGG+AGG | - | chr1.4:83515031-83515050 | None:intergenic | 45.0% | |
TATGGCTATCGCAGTTTCTG+AGG | + | chr1.4:83514595-83514614 | MS.gene73451:CDS | 45.0% | |
TGAGTTTACTTGGCCAAGAC+CGG | + | chr1.4:83513656-83513675 | MS.gene73451:CDS | 45.0% | |
TTATGCAACTCTTCAGGCAC+TGG | + | chr1.4:83513735-83513754 | MS.gene73451:CDS | 45.0% | |
TTGAGCCACAATAGAGAGAG+AGG | - | chr1.4:83513622-83513641 | None:intergenic | 45.0% | |
! | CGGTTGATTTCACAAGAAGC+TGG | + | chr1.4:83513676-83513695 | MS.gene73451:CDS | 45.0% |
! | GAGCTCCTAGTCTTTCTTTC+TGG | + | chr1.4:83514150-83514169 | MS.gene73451:CDS | 45.0% |
! | TACATGGTACCCTTTCAGGT+TGG | + | chr1.4:83514750-83514769 | MS.gene73451:intron | 45.0% |
! | TCAGGAGCATATGTGAACCT+TGG | + | chr1.4:83514910-83514929 | MS.gene73451:CDS | 45.0% |
!! | CGCAGTTTCTGAGGCTATAT+TGG | + | chr1.4:83514604-83514623 | MS.gene73451:CDS | 45.0% |
AGTGCCAAATGTGCACAGAG+AGG | - | chr1.4:83515123-83515142 | None:intergenic | 50.0% | |
ATAACCTAACACCCGTCGAG+AGG | - | chr1.4:83514648-83514667 | None:intergenic | 50.0% | |
CGCTATGCTATTCCTTCAGC+TGG | + | chr1.4:83514015-83514034 | MS.gene73451:CDS | 50.0% | |
TAGCAATGAGCAGGATGTGG+TGG | + | chr1.4:83514673-83514692 | MS.gene73451:CDS | 50.0% | |
! | CATCATTTTCGCCTCTCGAC+GGG | + | chr1.4:83514634-83514653 | MS.gene73451:CDS | 50.0% |
! | CCATCATTTTCGCCTCTCGA+CGG | + | chr1.4:83514633-83514652 | MS.gene73451:CDS | 50.0% |
! | CTAATGGGCACAGACAGTTC+CGG | + | chr1.4:83515496-83515515 | MS.gene73451:intron | 50.0% |
!! | ATTGCAGGCAATTTTGGCGC+GGG | + | chr1.4:83515703-83515722 | MS.gene73451:intron | 50.0% |
!! | GATTGCAGGCAATTTTGGCG+CGG | + | chr1.4:83515702-83515721 | MS.gene73451:intron | 50.0% |
ACAGACAATCGTGCTGCGTG+TGG | - | chr1.4:83514566-83514585 | None:intergenic | 55.0% | |
CCGTCGAGAGGCGAAAATGA+TGG | - | chr1.4:83514636-83514655 | None:intergenic | 55.0% | |
GGATGTGGTTGGCAGAAGTC+AGG | + | chr1.4:83514892-83514911 | MS.gene73451:CDS | 55.0% | |
! | AAGCAACTGGCTCAGCAGCA+AGG | + | chr1.4:83514389-83514408 | MS.gene73451:CDS | 55.0% |
!! | AGGCAATTTTGGCGCGGGAA+AGG | + | chr1.4:83515708-83515727 | MS.gene73451:intron | 55.0% |
GCTGCTGAGCCAGTTGCTTC+TGG | - | chr1.4:83514388-83514407 | None:intergenic | 60.0% | |
TTCGCCTCTCGACGGGTGTT+AGG | + | chr1.4:83514641-83514660 | MS.gene73451:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 83513025 | 83515772 | 83513025 | ID=MS.gene73451 |
chr1.4 | mRNA | 83513025 | 83515772 | 83513025 | ID=MS.gene73451.t1;Parent=MS.gene73451 |
chr1.4 | exon | 83513025 | 83513264 | 83513025 | ID=MS.gene73451.t1.exon1;Parent=MS.gene73451.t1 |
chr1.4 | CDS | 83513025 | 83513264 | 83513025 | ID=cds.MS.gene73451.t1;Parent=MS.gene73451.t1 |
chr1.4 | exon | 83513502 | 83514046 | 83513502 | ID=MS.gene73451.t1.exon2;Parent=MS.gene73451.t1 |
chr1.4 | CDS | 83513502 | 83514046 | 83513502 | ID=cds.MS.gene73451.t1;Parent=MS.gene73451.t1 |
chr1.4 | exon | 83514131 | 83514217 | 83514131 | ID=MS.gene73451.t1.exon3;Parent=MS.gene73451.t1 |
chr1.4 | CDS | 83514131 | 83514217 | 83514131 | ID=cds.MS.gene73451.t1;Parent=MS.gene73451.t1 |
chr1.4 | exon | 83514354 | 83514410 | 83514354 | ID=MS.gene73451.t1.exon4;Parent=MS.gene73451.t1 |
chr1.4 | CDS | 83514354 | 83514410 | 83514354 | ID=cds.MS.gene73451.t1;Parent=MS.gene73451.t1 |
chr1.4 | exon | 83514529 | 83514767 | 83514529 | ID=MS.gene73451.t1.exon5;Parent=MS.gene73451.t1 |
chr1.4 | CDS | 83514529 | 83514767 | 83514529 | ID=cds.MS.gene73451.t1;Parent=MS.gene73451.t1 |
chr1.4 | exon | 83514881 | 83515086 | 83514881 | ID=MS.gene73451.t1.exon6;Parent=MS.gene73451.t1 |
chr1.4 | CDS | 83514881 | 83515086 | 83514881 | ID=cds.MS.gene73451.t1;Parent=MS.gene73451.t1 |
chr1.4 | exon | 83515710 | 83515772 | 83515710 | ID=MS.gene73451.t1.exon7;Parent=MS.gene73451.t1 |
chr1.4 | CDS | 83515710 | 83515772 | 83515710 | ID=cds.MS.gene73451.t1;Parent=MS.gene73451.t1 |
Gene Sequence |
Protein sequence |