Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029498.t1 | XP_013470105.1 | 94.5 | 475 | 26 | 0 | 1 | 475 | 1 | 475 | 1.60E-246 | 861.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029498.t1 | Q9C994 | 57.8 | 472 | 195 | 2 | 2 | 472 | 5 | 473 | 5.1e-148 | 525.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029498.t1 | A0A072VRR8 | 94.5 | 475 | 26 | 0 | 1 | 475 | 1 | 475 | 1.2e-246 | 861.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029498.t1 | MTR_1g109060 | 97.895 | 475 | 10 | 0 | 1 | 475 | 1 | 475 | 0.0 | 933 |
MS.gene029498.t1 | MTR_1g109060 | 96.360 | 467 | 16 | 1 | 1 | 467 | 1 | 466 | 0.0 | 900 |
MS.gene029498.t1 | MTR_1g108990 | 89.552 | 469 | 48 | 1 | 1 | 468 | 1 | 469 | 0.0 | 822 |
MS.gene029498.t1 | MTR_1g108840 | 58.159 | 478 | 190 | 1 | 1 | 468 | 8 | 485 | 0.0 | 588 |
MS.gene029498.t1 | MTR_7g082810 | 53.305 | 469 | 215 | 1 | 1 | 469 | 1 | 465 | 1.51e-180 | 514 |
MS.gene029498.t1 | MTR_6g004220 | 52.232 | 448 | 213 | 1 | 22 | 468 | 21 | 468 | 1.65e-169 | 486 |
MS.gene029498.t1 | MTR_6g004220 | 51.826 | 438 | 210 | 1 | 22 | 458 | 28 | 465 | 7.58e-163 | 470 |
MS.gene029498.t1 | MTR_6g081410 | 49.247 | 465 | 229 | 2 | 7 | 469 | 13 | 472 | 6.78e-154 | 446 |
MS.gene029498.t1 | MTR_6g081780 | 47.957 | 465 | 235 | 2 | 7 | 469 | 13 | 472 | 1.33e-150 | 438 |
MS.gene029498.t1 | MTR_7g082800 | 53.590 | 390 | 181 | 0 | 83 | 472 | 1 | 390 | 5.30e-150 | 433 |
MS.gene029498.t1 | MTR_6g066380 | 47.425 | 466 | 243 | 1 | 5 | 468 | 8 | 473 | 8.69e-143 | 418 |
MS.gene029498.t1 | MTR_6g081810 | 45.905 | 464 | 225 | 1 | 5 | 468 | 8 | 445 | 4.37e-140 | 410 |
MS.gene029498.t1 | MTR_6g081300 | 45.815 | 454 | 241 | 1 | 13 | 466 | 4 | 452 | 8.50e-135 | 397 |
MS.gene029498.t1 | MTR_1g108810 | 48.394 | 436 | 225 | 0 | 23 | 458 | 33 | 468 | 1.49e-133 | 394 |
MS.gene029498.t1 | MTR_6g004220 | 52.432 | 370 | 175 | 1 | 22 | 390 | 28 | 397 | 1.65e-132 | 390 |
MS.gene029498.t1 | MTR_6g081240 | 43.636 | 440 | 246 | 2 | 23 | 461 | 9 | 447 | 2.86e-126 | 375 |
MS.gene029498.t1 | MTR_8g106670 | 42.257 | 452 | 261 | 0 | 15 | 466 | 3 | 454 | 2.07e-124 | 371 |
MS.gene029498.t1 | MTR_6g081310 | 45.309 | 437 | 227 | 2 | 42 | 466 | 14 | 450 | 6.64e-123 | 367 |
MS.gene029498.t1 | MTR_6g081390 | 41.704 | 446 | 259 | 1 | 24 | 468 | 12 | 457 | 9.48e-118 | 353 |
MS.gene029498.t1 | MTR_6g081400 | 40.359 | 446 | 265 | 1 | 24 | 468 | 15 | 460 | 6.15e-116 | 349 |
MS.gene029498.t1 | MTR_6g004220 | 53.979 | 289 | 132 | 1 | 22 | 309 | 28 | 316 | 9.39e-105 | 315 |
MS.gene029498.t1 | MTR_4g048000 | 35.398 | 452 | 290 | 1 | 25 | 474 | 65 | 516 | 3.32e-95 | 297 |
MS.gene029498.t1 | MTR_2g088400 | 35.491 | 448 | 289 | 0 | 25 | 472 | 53 | 500 | 3.69e-95 | 297 |
MS.gene029498.t1 | MTR_2g078930 | 35.402 | 435 | 281 | 0 | 23 | 457 | 42 | 476 | 8.16e-91 | 285 |
MS.gene029498.t1 | MTR_2g078960 | 34.649 | 456 | 298 | 0 | 2 | 457 | 11 | 466 | 1.71e-90 | 284 |
MS.gene029498.t1 | MTR_2g078970 | 34.943 | 435 | 283 | 0 | 23 | 457 | 30 | 464 | 7.44e-89 | 280 |
MS.gene029498.t1 | MTR_2g022980 | 36.219 | 439 | 272 | 2 | 32 | 466 | 56 | 490 | 3.74e-88 | 278 |
MS.gene029498.t1 | MTR_2g079020 | 35.172 | 435 | 282 | 0 | 23 | 457 | 36 | 470 | 4.09e-88 | 278 |
MS.gene029498.t1 | MTR_5g033100 | 35.526 | 456 | 291 | 2 | 22 | 475 | 54 | 508 | 1.96e-86 | 275 |
MS.gene029498.t1 | MTR_2g088400 | 35.941 | 409 | 262 | 0 | 25 | 433 | 53 | 461 | 2.37e-84 | 267 |
MS.gene029498.t1 | MTR_8g069470 | 34.792 | 457 | 292 | 4 | 22 | 475 | 48 | 501 | 1.13e-81 | 262 |
MS.gene029498.t1 | MTR_8g063590 | 35.135 | 444 | 285 | 3 | 25 | 466 | 54 | 496 | 7.27e-79 | 254 |
MS.gene029498.t1 | MTR_1g021740 | 34.842 | 442 | 287 | 1 | 25 | 466 | 36 | 476 | 1.71e-78 | 253 |
MS.gene029498.t1 | MTR_5g090290 | 34.703 | 438 | 282 | 2 | 37 | 472 | 59 | 494 | 5.26e-78 | 254 |
MS.gene029498.t1 | MTR_5g032720 | 34.989 | 443 | 286 | 2 | 25 | 466 | 37 | 478 | 2.30e-77 | 250 |
MS.gene029498.t1 | MTR_7g087400 | 33.478 | 460 | 299 | 3 | 7 | 466 | 18 | 470 | 1.06e-75 | 246 |
MS.gene029498.t1 | MTR_5g010830 | 33.258 | 445 | 291 | 2 | 23 | 464 | 64 | 505 | 6.60e-75 | 245 |
MS.gene029498.t1 | MTR_5g067460 | 31.081 | 444 | 302 | 2 | 23 | 464 | 54 | 495 | 1.81e-74 | 244 |
MS.gene029498.t1 | MTR_7g087410 | 33.183 | 443 | 295 | 1 | 24 | 466 | 31 | 472 | 9.16e-74 | 241 |
MS.gene029498.t1 | MTR_1g101500 | 31.532 | 444 | 298 | 2 | 24 | 464 | 64 | 504 | 2.81e-72 | 238 |
MS.gene029498.t1 | MTR_3g111020 | 31.304 | 460 | 310 | 2 | 8 | 464 | 35 | 491 | 6.83e-72 | 238 |
MS.gene029498.t1 | MTR_6g088805 | 33.118 | 465 | 299 | 5 | 1 | 463 | 9 | 463 | 1.22e-71 | 235 |
MS.gene029498.t1 | MTR_6g043810 | 30.983 | 468 | 313 | 4 | 7 | 464 | 5 | 472 | 3.44e-71 | 234 |
MS.gene029498.t1 | MTR_5g032750 | 34.820 | 471 | 286 | 11 | 1 | 463 | 18 | 475 | 4.30e-71 | 234 |
MS.gene029498.t1 | MTR_6g043810 | 30.983 | 468 | 313 | 4 | 7 | 464 | 15 | 482 | 5.63e-71 | 234 |
MS.gene029498.t1 | MTR_7g087370 | 31.635 | 471 | 282 | 4 | 1 | 466 | 6 | 441 | 1.62e-68 | 226 |
MS.gene029498.t1 | MTR_7g087430 | 35.677 | 384 | 246 | 1 | 83 | 466 | 1 | 383 | 3.55e-68 | 223 |
MS.gene029498.t1 | MTR_0039s0080 | 29.279 | 444 | 308 | 2 | 24 | 464 | 38 | 478 | 1.61e-67 | 225 |
MS.gene029498.t1 | MTR_7g087410 | 33.854 | 384 | 253 | 1 | 83 | 466 | 1 | 383 | 8.49e-67 | 220 |
MS.gene029498.t1 | MTR_1g100180 | 32.819 | 454 | 302 | 2 | 21 | 473 | 40 | 491 | 6.95e-65 | 218 |
MS.gene029498.t1 | MTR_8g102430 | 28.510 | 463 | 310 | 3 | 1 | 463 | 1 | 442 | 8.08e-64 | 213 |
MS.gene029498.t1 | MTR_3g099700 | 30.769 | 468 | 316 | 4 | 1 | 466 | 27 | 488 | 3.31e-63 | 213 |
MS.gene029498.t1 | MTR_3g099720 | 30.317 | 442 | 307 | 1 | 25 | 466 | 42 | 482 | 1.81e-62 | 211 |
MS.gene029498.t1 | MTR_6g047640 | 30.493 | 446 | 289 | 2 | 21 | 466 | 28 | 452 | 1.54e-61 | 208 |
MS.gene029498.t1 | MTR_6g047640 | 31.614 | 446 | 303 | 1 | 21 | 466 | 28 | 471 | 3.06e-61 | 207 |
MS.gene029498.t1 | MTR_6g047610 | 31.126 | 453 | 307 | 3 | 21 | 471 | 28 | 477 | 8.18e-61 | 206 |
MS.gene029498.t1 | MTR_5g087930 | 33.995 | 403 | 241 | 6 | 49 | 449 | 51 | 430 | 1.29e-60 | 205 |
MS.gene029498.t1 | MTR_4g027920 | 31.778 | 450 | 291 | 9 | 24 | 464 | 156 | 598 | 1.18e-58 | 204 |
MS.gene029498.t1 | MTR_6g027200 | 31.965 | 463 | 300 | 6 | 9 | 466 | 25 | 477 | 2.74e-58 | 200 |
MS.gene029498.t1 | MTR_2g435930 | 29.221 | 462 | 307 | 4 | 23 | 466 | 18 | 477 | 1.15e-57 | 199 |
MS.gene029498.t1 | MTR_6g027190 | 32.696 | 471 | 304 | 7 | 1 | 466 | 3 | 465 | 3.64e-57 | 197 |
MS.gene029498.t1 | MTR_6g047590 | 30.717 | 446 | 306 | 2 | 21 | 466 | 28 | 470 | 5.39e-55 | 191 |
MS.gene029498.t1 | MTR_2g078990 | 34.130 | 293 | 193 | 0 | 165 | 457 | 1 | 293 | 2.58e-54 | 184 |
MS.gene029498.t1 | MTR_5g011540 | 29.688 | 448 | 300 | 6 | 24 | 463 | 43 | 483 | 4.06e-48 | 173 |
MS.gene029498.t1 | MTR_5g090280 | 29.017 | 417 | 262 | 3 | 83 | 472 | 1 | 410 | 1.19e-44 | 162 |
MS.gene029498.t1 | MTR_2g079030 | 36.923 | 195 | 123 | 0 | 263 | 457 | 319 | 513 | 7.62e-35 | 137 |
MS.gene029498.t1 | MTR_7g007430 | 50.000 | 62 | 31 | 0 | 310 | 371 | 16 | 77 | 1.38e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029498.t1 | AT1G71140 | 60.944 | 466 | 178 | 2 | 2 | 466 | 5 | 467 | 0.0 | 584 |
MS.gene029498.t1 | AT1G15150 | 56.739 | 460 | 199 | 0 | 15 | 474 | 21 | 480 | 0.0 | 551 |
MS.gene029498.t1 | AT1G15170 | 58.643 | 457 | 184 | 1 | 15 | 466 | 19 | 475 | 0.0 | 546 |
MS.gene029498.t1 | AT1G15160 | 55.720 | 472 | 204 | 1 | 8 | 474 | 9 | 480 | 0.0 | 546 |
MS.gene029498.t1 | AT1G15180 | 58.407 | 452 | 188 | 0 | 15 | 466 | 25 | 476 | 0.0 | 521 |
MS.gene029498.t1 | AT1G66760 | 49.251 | 467 | 231 | 2 | 7 | 473 | 14 | 474 | 5.08e-160 | 462 |
MS.gene029498.t1 | AT2G04080 | 49.573 | 468 | 234 | 1 | 1 | 466 | 1 | 468 | 1.40e-158 | 458 |
MS.gene029498.t1 | AT2G04100 | 49.257 | 471 | 234 | 2 | 1 | 466 | 1 | 471 | 3.84e-158 | 457 |
MS.gene029498.t1 | AT2G04090 | 48.832 | 471 | 236 | 1 | 1 | 466 | 1 | 471 | 3.88e-157 | 454 |
MS.gene029498.t1 | AT2G04050 | 49.684 | 475 | 237 | 1 | 1 | 473 | 1 | 475 | 2.75e-156 | 452 |
MS.gene029498.t1 | AT1G15170 | 59.831 | 356 | 143 | 0 | 111 | 466 | 1 | 356 | 4.13e-156 | 447 |
MS.gene029498.t1 | AT2G04070 | 48.626 | 473 | 241 | 1 | 1 | 471 | 1 | 473 | 1.28e-155 | 451 |
MS.gene029498.t1 | AT1G66780 | 50.433 | 462 | 229 | 0 | 7 | 468 | 17 | 478 | 1.33e-155 | 451 |
MS.gene029498.t1 | AT1G15150 | 57.418 | 364 | 155 | 0 | 111 | 474 | 1 | 364 | 1.90e-155 | 446 |
MS.gene029498.t1 | AT1G66760 | 48.678 | 454 | 229 | 1 | 7 | 460 | 14 | 463 | 3.81e-154 | 446 |
MS.gene029498.t1 | AT2G04080 | 49.130 | 460 | 232 | 1 | 1 | 458 | 1 | 460 | 4.60e-154 | 446 |
MS.gene029498.t1 | AT2G04040 | 48.000 | 475 | 245 | 1 | 1 | 473 | 1 | 475 | 5.51e-154 | 446 |
MS.gene029498.t1 | AT1G64820 | 48.780 | 451 | 231 | 0 | 23 | 473 | 27 | 477 | 8.10e-154 | 447 |
MS.gene029498.t1 | AT2G04100 | 48.812 | 463 | 232 | 2 | 1 | 458 | 1 | 463 | 1.72e-153 | 445 |
MS.gene029498.t1 | AT1G73700 | 49.210 | 443 | 225 | 0 | 24 | 466 | 23 | 465 | 7.71e-144 | 421 |
MS.gene029498.t1 | AT5G52450 | 48.180 | 467 | 236 | 1 | 6 | 466 | 1 | 467 | 8.00e-142 | 416 |
MS.gene029498.t1 | AT2G34360 | 45.633 | 458 | 236 | 3 | 9 | 465 | 16 | 461 | 2.51e-133 | 394 |
MS.gene029498.t1 | AT1G66760 | 47.656 | 384 | 197 | 1 | 7 | 390 | 14 | 393 | 9.35e-122 | 361 |
MS.gene029498.t1 | AT1G66760 | 50.448 | 335 | 166 | 0 | 126 | 460 | 1 | 335 | 1.33e-115 | 343 |
MS.gene029498.t1 | AT2G34360 | 40.044 | 457 | 221 | 2 | 9 | 465 | 16 | 419 | 1.86e-111 | 337 |
MS.gene029498.t1 | AT1G15180 | 57.500 | 280 | 119 | 0 | 111 | 390 | 1 | 280 | 6.07e-111 | 334 |
MS.gene029498.t1 | AT3G23550 | 36.044 | 455 | 287 | 2 | 7 | 457 | 9 | 463 | 4.60e-95 | 295 |
MS.gene029498.t1 | AT3G23560 | 35.841 | 452 | 289 | 1 | 7 | 457 | 20 | 471 | 1.81e-92 | 289 |
MS.gene029498.t1 | AT1G61890 | 34.676 | 447 | 292 | 0 | 25 | 471 | 47 | 493 | 5.33e-92 | 288 |
MS.gene029498.t1 | AT3G21690 | 35.541 | 453 | 289 | 1 | 25 | 474 | 52 | 504 | 1.44e-91 | 287 |
MS.gene029498.t1 | AT1G11670 | 35.360 | 444 | 287 | 0 | 25 | 468 | 50 | 493 | 2.29e-91 | 287 |
MS.gene029498.t1 | AT1G61890 | 34.793 | 434 | 283 | 0 | 25 | 458 | 47 | 480 | 2.16e-89 | 281 |
MS.gene029498.t1 | AT4G21910 | 35.449 | 457 | 284 | 4 | 25 | 475 | 57 | 508 | 1.37e-85 | 272 |
MS.gene029498.t1 | AT4G21910 | 35.449 | 457 | 284 | 4 | 25 | 475 | 57 | 508 | 1.37e-85 | 272 |
MS.gene029498.t1 | AT4G21910 | 34.792 | 457 | 287 | 4 | 25 | 475 | 55 | 506 | 3.20e-84 | 268 |
MS.gene029498.t1 | AT4G21910 | 34.792 | 457 | 287 | 4 | 25 | 475 | 55 | 506 | 3.20e-84 | 268 |
MS.gene029498.t1 | AT1G12950 | 34.157 | 445 | 292 | 1 | 22 | 466 | 64 | 507 | 3.69e-82 | 263 |
MS.gene029498.t1 | AT1G47530 | 35.955 | 445 | 284 | 1 | 22 | 466 | 32 | 475 | 2.34e-81 | 260 |
MS.gene029498.t1 | AT4G21903 | 35.697 | 423 | 259 | 4 | 62 | 475 | 85 | 503 | 4.19e-81 | 260 |
MS.gene029498.t1 | AT3G59030 | 34.755 | 469 | 296 | 5 | 10 | 472 | 34 | 498 | 6.27e-80 | 257 |
MS.gene029498.t1 | AT3G26590 | 33.850 | 452 | 298 | 1 | 22 | 473 | 42 | 492 | 1.24e-79 | 256 |
MS.gene029498.t1 | AT1G61890 | 34.204 | 421 | 277 | 0 | 9 | 429 | 31 | 451 | 1.98e-79 | 255 |
MS.gene029498.t1 | AT1G23300 | 36.689 | 447 | 278 | 3 | 22 | 466 | 41 | 484 | 2.40e-79 | 256 |
MS.gene029498.t1 | AT4G21903 | 35.427 | 398 | 248 | 3 | 83 | 475 | 1 | 394 | 1.67e-78 | 250 |
MS.gene029498.t1 | AT5G38030 | 32.965 | 452 | 302 | 1 | 22 | 473 | 42 | 492 | 1.93e-78 | 253 |
MS.gene029498.t1 | AT4G21903 | 35.337 | 416 | 253 | 4 | 62 | 465 | 85 | 496 | 3.00e-78 | 253 |
MS.gene029498.t1 | AT5G44050 | 33.634 | 443 | 292 | 2 | 25 | 466 | 40 | 481 | 1.34e-74 | 243 |
MS.gene029498.t1 | AT1G71870 | 31.723 | 476 | 305 | 7 | 6 | 462 | 5 | 479 | 2.15e-72 | 238 |
MS.gene029498.t1 | AT4G29140 | 30.839 | 441 | 305 | 0 | 23 | 463 | 54 | 494 | 7.62e-72 | 237 |
MS.gene029498.t1 | AT1G47530 | 36.458 | 384 | 243 | 1 | 83 | 466 | 1 | 383 | 1.95e-71 | 232 |
MS.gene029498.t1 | AT5G19700 | 31.519 | 441 | 302 | 0 | 24 | 464 | 35 | 475 | 4.04e-71 | 234 |
MS.gene029498.t1 | AT5G65380 | 33.623 | 461 | 299 | 3 | 7 | 466 | 24 | 478 | 5.62e-71 | 233 |
MS.gene029498.t1 | AT1G58340 | 32.215 | 447 | 301 | 2 | 23 | 468 | 56 | 501 | 1.37e-70 | 233 |
MS.gene029498.t1 | AT3G26590 | 34.783 | 391 | 254 | 1 | 83 | 473 | 1 | 390 | 2.00e-70 | 229 |
MS.gene029498.t1 | AT1G33090 | 31.522 | 460 | 310 | 2 | 7 | 466 | 22 | 476 | 3.79e-70 | 231 |
MS.gene029498.t1 | AT1G33110 | 33.118 | 465 | 305 | 3 | 2 | 466 | 18 | 476 | 1.28e-69 | 230 |
MS.gene029498.t1 | AT1G33100 | 32.609 | 460 | 305 | 2 | 7 | 466 | 19 | 473 | 1.74e-69 | 229 |
MS.gene029498.t1 | AT5G10420 | 32.244 | 459 | 305 | 3 | 9 | 466 | 26 | 479 | 2.81e-69 | 229 |
MS.gene029498.t1 | AT5G52050 | 29.764 | 467 | 318 | 3 | 5 | 463 | 15 | 479 | 8.94e-68 | 225 |
MS.gene029498.t1 | AT3G23560 | 33.766 | 385 | 254 | 1 | 7 | 390 | 20 | 404 | 4.99e-67 | 221 |
MS.gene029498.t1 | AT4G23030 | 34.298 | 449 | 282 | 5 | 23 | 464 | 30 | 472 | 3.88e-66 | 221 |
MS.gene029498.t1 | AT1G33080 | 31.729 | 457 | 306 | 3 | 8 | 463 | 22 | 473 | 4.07e-65 | 218 |
MS.gene029498.t1 | AT4G00350 | 33.556 | 450 | 293 | 3 | 21 | 468 | 84 | 529 | 6.27e-65 | 219 |
MS.gene029498.t1 | AT1G33080 | 31.092 | 476 | 315 | 4 | 8 | 475 | 22 | 492 | 7.33e-65 | 218 |
MS.gene029498.t1 | AT2G38510 | 30.023 | 443 | 307 | 3 | 24 | 464 | 5 | 446 | 3.79e-64 | 215 |
MS.gene029498.t1 | AT5G49130 | 30.454 | 463 | 298 | 6 | 23 | 466 | 24 | 481 | 7.07e-62 | 210 |
MS.gene029498.t1 | AT4G25640 | 33.184 | 446 | 296 | 1 | 21 | 466 | 30 | 473 | 1.48e-59 | 203 |
MS.gene029498.t1 | AT4G25640 | 33.184 | 446 | 296 | 1 | 21 | 466 | 30 | 473 | 1.96e-59 | 204 |
MS.gene029498.t1 | AT3G59030 | 33.075 | 387 | 249 | 5 | 10 | 390 | 34 | 416 | 6.61e-56 | 192 |
MS.gene029498.t1 | AT4G25640 | 33.085 | 402 | 267 | 1 | 21 | 422 | 30 | 429 | 3.75e-54 | 188 |
MS.gene029498.t1 | AT5G17700 | 30.444 | 473 | 316 | 6 | 1 | 466 | 8 | 474 | 7.36e-54 | 188 |
MS.gene029498.t1 | AT5G17700 | 30.444 | 473 | 316 | 6 | 1 | 466 | 8 | 474 | 7.36e-54 | 188 |
MS.gene029498.t1 | AT3G03620 | 29.701 | 468 | 314 | 5 | 8 | 466 | 16 | 477 | 1.24e-53 | 188 |
MS.gene029498.t1 | AT3G03620 | 29.701 | 468 | 314 | 5 | 8 | 466 | 16 | 477 | 1.24e-53 | 188 |
MS.gene029498.t1 | AT4G22790 | 28.285 | 449 | 308 | 6 | 23 | 463 | 28 | 470 | 1.14e-49 | 177 |
MS.gene029498.t1 | AT1G33110 | 30.769 | 390 | 264 | 3 | 2 | 391 | 18 | 401 | 5.15e-45 | 162 |
MS.gene029498.t1 | AT2G04066 | 48.438 | 128 | 66 | 0 | 344 | 471 | 41 | 168 | 6.36e-37 | 134 |
MS.gene029498.t1 | AT5G17700 | 28.463 | 397 | 271 | 6 | 1 | 390 | 8 | 398 | 1.58e-33 | 131 |
Find 104 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCTGTTATATTGGGTTTC+TGG | 0.056697 | 1.2:+80871819 | MS.gene029498:CDS |
GTCTTCCTCTATCTCTATTA+TGG | 0.186111 | 1.2:+80870192 | MS.gene029498:CDS |
GAACTCCTAATCCTTCTTTC+TGG | 0.192555 | 1.2:+80871011 | MS.gene029498:CDS |
AATTCCAATTGCTGTTATAT+TGG | 0.215901 | 1.2:+80871811 | MS.gene029498:CDS |
AGTTTACATGGCACCCTTTC+AGG | 0.234134 | 1.2:+80871603 | MS.gene029498:CDS |
CACCTTCCGGGAGGCGAAAA+TGG | 0.238801 | 1.2:-80871493 | None:intergenic |
GCTGCTGAGCCAGTTGCTTC+TGG | 0.243748 | 1.2:-80871260 | None:intergenic |
AGGAATGGCTCCATTGAAAT+TGG | 0.270954 | 1.2:-80870551 | None:intergenic |
CCGAGTTTCTTCACAATTAG+TGG | 0.275387 | 1.2:-80870525 | None:intergenic |
AGTTTGTAAAACCTGTTATA+AGG | 0.276471 | 1.2:-80871913 | None:intergenic |
ATTCCAATTGCTGTTATATT+GGG | 0.276947 | 1.2:+80871812 | MS.gene029498:CDS |
ATCTCTATTATGGATCTTCT+TGG | 0.306738 | 1.2:+80870202 | MS.gene029498:CDS |
ATCTCTCTCTGTGGTGTCTC+TGG | 0.340745 | 1.2:+80868789 | MS.gene029498:CDS |
ATACATAACCTAACACCTTC+CGG | 0.341937 | 1.2:-80871506 | None:intergenic |
AATGATGATGGTTGGTCGTT+TGG | 0.358959 | 1.2:+80868734 | MS.gene029498:CDS |
TTAGGAGCTGCACTTTCTAT+TGG | 0.362299 | 1.2:+80870452 | MS.gene029498:CDS |
GTTTGCCTATGCAACGCTTC+AGG | 0.367733 | 1.2:+80870307 | MS.gene029498:CDS |
TTCGCCTCCCGGAAGGTGTT+AGG | 0.373320 | 1.2:+80871498 | MS.gene029498:CDS |
TTCCATCAGCAGGAATGATT+TGG | 0.375335 | 1.2:+80870603 | MS.gene029498:CDS |
GAAGTTTCAAGCTGTGGGTT+TGG | 0.377359 | 1.2:-80871041 | None:intergenic |
TTTCTATTGGTACTTCATAC+TGG | 0.380879 | 1.2:+80870465 | MS.gene029498:CDS |
ACTCAATGCGGACAAGCTTA+TGG | 0.385550 | 1.2:+80870104 | MS.gene029498:CDS |
AAACCCAATATAACAGCAAT+TGG | 0.388406 | 1.2:-80871815 | None:intergenic |
ACAAATTATTTCAATGATGA+TGG | 0.391749 | 1.2:+80868722 | MS.gene029498:CDS |
GAGGAAAAGGACTGTGGATT+GGG | 0.392985 | 1.2:+80871852 | MS.gene029498:CDS |
GTTTGTAAAACCTGTTATAA+GGG | 0.396382 | 1.2:-80871912 | None:intergenic |
AAACTTCAGTCTTATCCATA+TGG | 0.405505 | 1.2:+80871057 | MS.gene029498:CDS |
GGTTTCTGGTTTGAGTTAAG+AGG | 0.406704 | 1.2:+80871833 | MS.gene029498:CDS |
AAATCTGGATTAGGTTGCTT+AGG | 0.409316 | 1.2:+80870434 | MS.gene029498:CDS |
TACATAACCTAACACCTTCC+GGG | 0.417821 | 1.2:-80871505 | None:intergenic |
AGAGGTTGAAAATATGGAAA+AGG | 0.418865 | 1.2:+80868572 | None:intergenic |
GAGGTTGAAAATATGGAAAA+GGG | 0.419894 | 1.2:+80868573 | None:intergenic |
ACAGGTATTGCTAGAGGATC+TGG | 0.427858 | 1.2:+80871737 | MS.gene029498:intron |
AACTCGGGTTCCAATTTCAA+TGG | 0.427870 | 1.2:+80870541 | MS.gene029498:CDS |
ATGGAGCCATTCCTTGGAAT+AGG | 0.428034 | 1.2:+80870560 | MS.gene029498:CDS |
ATGATGATGGTTGGTCGTTT+GGG | 0.428454 | 1.2:+80868735 | MS.gene029498:CDS |
AGAGGAAAAGGACTGTGGAT+TGG | 0.429463 | 1.2:+80871851 | MS.gene029498:CDS |
ACCAGAGTTTCAAATGCATT+AGG | 0.432096 | 1.2:+80871387 | MS.gene029498:CDS |
AGGATCTGGTTGGCAGAAGT+TGG | 0.434457 | 1.2:+80871751 | MS.gene029498:CDS |
ATTTCAATGGAGCCATTCCT+TGG | 0.438110 | 1.2:+80870554 | MS.gene029498:CDS |
GAAGACCAGAAAGAAGGATT+AGG | 0.438439 | 1.2:-80871016 | None:intergenic |
TGGTTTGAGTTAAGAGGAAA+AGG | 0.438724 | 1.2:+80871839 | MS.gene029498:CDS |
TCTCTATTATGGATCTTCTT+GGG | 0.443745 | 1.2:+80870203 | MS.gene029498:CDS |
AAGATCCATAATAGAGATAG+AGG | 0.444599 | 1.2:-80870197 | None:intergenic |
CCACTAATTGTGAAGAAACT+CGG | 0.458176 | 1.2:+80870525 | MS.gene029498:CDS |
TGGTTGAATGTGATTATACT+TGG | 0.474392 | 1.2:+80870485 | MS.gene029498:CDS |
CTGTGGATTGGGATACTTGT+GGG | 0.475726 | 1.2:+80871863 | MS.gene029498:CDS |
GGTGGACTATGTCACATATA+TGG | 0.479811 | 1.2:+80871548 | MS.gene029498:CDS |
CTATGCAACGCTTCAGGCAC+TGG | 0.480090 | 1.2:+80870313 | MS.gene029498:CDS |
AACTCTCCTATTCCAAGGAA+TGG | 0.484049 | 1.2:-80870566 | None:intergenic |
TATACAATTCCAGAAGCAAC+TGG | 0.486154 | 1.2:+80871251 | MS.gene029498:CDS |
CGATACGCTATTCCATCAGC+AGG | 0.488355 | 1.2:+80870593 | MS.gene029498:CDS |
CAGCTTCTTGTGAAATCAGA+GGG | 0.489275 | 1.2:-80870253 | None:intergenic |
TACCAAATCATTCCTGCTGA+TGG | 0.489588 | 1.2:-80870605 | None:intergenic |
GTTGCATAGGCAAACAGAGC+AGG | 0.493831 | 1.2:-80870299 | None:intergenic |
TCCTAATGCATTTGAAACTC+TGG | 0.496068 | 1.2:-80871388 | None:intergenic |
TATGACTGTTGCAGTTTCTG+AGG | 0.496073 | 1.2:+80871452 | MS.gene029498:CDS |
GACAAAGTGACAGCGATCAT+AGG | 0.498614 | 1.2:-80868687 | None:intergenic |
ATTATTTCAATGATGATGGT+TGG | 0.500723 | 1.2:+80868726 | MS.gene029498:CDS |
GGATCTGGTTGGCAGAAGTT+GGG | 0.512590 | 1.2:+80871752 | MS.gene029498:CDS |
GTTTCAAATGCATTAGGAGG+TGG | 0.514556 | 1.2:+80871393 | MS.gene029498:CDS |
AAGGATATTTCAAGGAAGAC+AGG | 0.516463 | 1.2:+80872608 | MS.gene029498:CDS |
GCACGGGAAAGGATATTTCA+AGG | 0.516542 | 1.2:+80872600 | MS.gene029498:CDS |
TTATGTATTTAGCAATGAGC+AGG | 0.518001 | 1.2:+80871521 | MS.gene029498:CDS |
TATTATGGATCTTCTTGGGA+AGG | 0.519439 | 1.2:+80870207 | MS.gene029498:CDS |
CCTCTGATTTCACAAGAAGC+TGG | 0.520359 | 1.2:+80870254 | MS.gene029498:CDS |
AGACTGAAGTTTCAAGCTGT+GGG | 0.523216 | 1.2:-80871046 | None:intergenic |
TTGGAAGAAGACCAGAAAGA+AGG | 0.534109 | 1.2:-80871022 | None:intergenic |
CCAGCTTCTTGTGAAATCAG+AGG | 0.537156 | 1.2:-80870254 | None:intergenic |
AAGACTGAAGTTTCAAGCTG+TGG | 0.540131 | 1.2:-80871047 | None:intergenic |
CACTAATTGTGAAGAAACTC+GGG | 0.553938 | 1.2:+80870526 | MS.gene029498:CDS |
CAGTGCCTGAAGCGTTGCAT+AGG | 0.557039 | 1.2:-80870312 | None:intergenic |
ATGGGGTGTATTTGTTCAAG+AGG | 0.559648 | 1.2:+80868638 | MS.gene029498:CDS |
ACAGACAATCGCGCTGCTTG+TGG | 0.562468 | 1.2:-80871420 | None:intergenic |
GTTATAGTAGATAGTTTACA+TGG | 0.564425 | 1.2:+80871591 | MS.gene029498:CDS |
AGTTAAGAGGAAAAGGACTG+TGG | 0.570117 | 1.2:+80871846 | MS.gene029498:CDS |
TTAGAGAAAGACAGAGAAGG+TGG | 0.570704 | 1.2:+80868600 | MS.gene029498:CDS |
TTGGGAGCATATGTGAACCT+TGG | 0.571235 | 1.2:+80871770 | MS.gene029498:CDS |
AGGCAATCAAAGCACGGGAA+AGG | 0.580536 | 1.2:+80872589 | MS.gene029498:intron |
ATTGCAGGCAATCAAAGCAC+GGG | 0.588180 | 1.2:+80872584 | MS.gene029498:intron |
GAAAGAACTCTCCTATTCCA+AGG | 0.590275 | 1.2:-80870571 | None:intergenic |
AGAGTTTCAAATGCATTAGG+AGG | 0.596053 | 1.2:+80871390 | MS.gene029498:CDS |
TAGCAAAAGTGCTTGACAGA+AGG | 0.596478 | 1.2:-80871888 | None:intergenic |
TTGTTAGAGAAAGACAGAGA+AGG | 0.598771 | 1.2:+80868597 | MS.gene029498:CDS |
TTATATACAGGTATTGCTAG+AGG | 0.605206 | 1.2:+80871731 | MS.gene029498:intron |
GTTCAAATGACCACCACTCA+AGG | 0.606561 | 1.2:-80870992 | None:intergenic |
TAGCAATGAGCAGGATGTGG+TGG | 0.608741 | 1.2:+80871530 | MS.gene029498:CDS |
ACAGAGGAACTTATAACAAG+AGG | 0.610630 | 1.2:-80870368 | None:intergenic |
GTGGTTCAAGAAGCATAACA+TGG | 0.612250 | 1.2:+80868619 | MS.gene029498:CDS |
GATTGCAGGCAATCAAAGCA+CGG | 0.614760 | 1.2:+80872583 | MS.gene029498:intron |
AAGCAACTGGCTCAGCAGCA+AGG | 0.628073 | 1.2:+80871264 | MS.gene029498:CDS |
CTTCCGGGAGGCGAAAATGG+TGG | 0.628733 | 1.2:-80871490 | None:intergenic |
CAGAGCAGGAATCATGCACA+TGG | 0.633097 | 1.2:-80870285 | None:intergenic |
TGGTTCAAGAAGCATAACAT+GGG | 0.635705 | 1.2:+80868620 | MS.gene029498:CDS |
GCTATTGCTATCTCTCTCTG+TGG | 0.641720 | 1.2:+80868780 | MS.gene029498:CDS |
ATTTAGCAATGAGCAGGATG+TGG | 0.642366 | 1.2:+80871527 | MS.gene029498:CDS |
ATAACATTTAGACTTATCAG+AGG | 0.656211 | 1.2:-80871573 | None:intergenic |
ATGGAAGCACAGGGTAACAG+AGG | 0.669450 | 1.2:-80870384 | None:intergenic |
GTATTGCTAGAGGATCTGGT+TGG | 0.685433 | 1.2:+80871741 | MS.gene029498:CDS |
ACTGTGGATTGGGATACTTG+TGG | 0.687788 | 1.2:+80871862 | MS.gene029498:CDS |
AAAAGCTACATGGAAGCACA+GGG | 0.694846 | 1.2:-80870393 | None:intergenic |
GGTTCAAGAAGCATAACATG+GGG | 0.725878 | 1.2:+80868621 | MS.gene029498:CDS |
ATAACCTAACACCTTCCGGG+AGG | 0.742045 | 1.2:-80871502 | None:intergenic |
TGTGCACTTGAAACTCAATG+CGG | 0.793392 | 1.2:+80870092 | MS.gene029498:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATAGTATAAAAATCTAAT+AGG | + | chr1.2:80872366-80872385 | MS.gene029498:intron | 10.0% |
!!! | TTACTTTATGAATTTTTTTT+AGG | - | chr1.2:80869795-80869814 | None:intergenic | 10.0% |
!! | ATACCTGTATATAAATATAA+TGG | - | chr1.2:80871725-80871744 | None:intergenic | 15.0% |
!!! | ATAATAAGTAACATTGATTT+TGG | - | chr1.2:80869999-80870018 | None:intergenic | 15.0% |
!!! | TAATGAGTAAACAATTATTT+TGG | - | chr1.2:80869496-80869515 | None:intergenic | 15.0% |
!!! | TATTGAATGTTTTTTTTTGT+TGG | + | chr1.2:80869878-80869897 | MS.gene029498:intron | 15.0% |
!!! | TATTTTTATTTCTTTCTGAT+TGG | + | chr1.2:80871350-80871369 | MS.gene029498:intron | 15.0% |
!!! | TTGTTTTTCATTCATATAAT+TGG | + | chr1.2:80871164-80871183 | MS.gene029498:intron | 15.0% |
!!! | TTTGTAATTTTAATACATTC+AGG | + | chr1.2:80872201-80872220 | MS.gene029498:intron | 15.0% |
!! | AAATGCAATTAATTTCGTAT+AGG | - | chr1.2:80869530-80869549 | None:intergenic | 20.0% |
!! | AATAAGTAATAACTACCAAA+CGG | - | chr1.2:80869823-80869842 | None:intergenic | 20.0% |
!! | AATATGTAAGAAACAAATCA+TGG | - | chr1.2:80870959-80870978 | None:intergenic | 20.0% |
!! | ACAAATTATTTCAATGATGA+TGG | + | chr1.2:80868722-80868741 | MS.gene029498:CDS | 20.0% |
!! | AGTCCATTATATTTATATAC+AGG | + | chr1.2:80871719-80871738 | MS.gene029498:intron | 20.0% |
!! | GCAAAGCAATATAAAAAATT+TGG | + | chr1.2:80870128-80870147 | MS.gene029498:CDS | 20.0% |
!! | GCAATCAATTTCATATTAAT+TGG | - | chr1.2:80870028-80870047 | None:intergenic | 20.0% |
!! | TAAAAGGTTAGATATAAGAT+AGG | + | chr1.2:80869253-80869272 | MS.gene029498:intron | 20.0% |
!!! | ACATACCTAATATAAGTTTT+GGG | + | chr1.2:80869089-80869108 | MS.gene029498:intron | 20.0% |
!!! | GTCTTCTATTAGTAATTTTA+CGG | - | chr1.2:80869905-80869924 | None:intergenic | 20.0% |
!!! | TTAGTTTTTAAATCTGGATT+AGG | + | chr1.2:80870425-80870444 | MS.gene029498:CDS | 20.0% |
!!! | TTCTTCTATCAGTAATTTTA+TGG | - | chr1.2:80869402-80869421 | None:intergenic | 20.0% |
!!! | TTTGGTAGTTATTACTTATT+AGG | + | chr1.2:80869823-80869842 | MS.gene029498:intron | 20.0% |
! | ACATTCAATATCAAACTTGT+TGG | - | chr1.2:80869362-80869381 | None:intergenic | 25.0% |
! | AGAATCTTAATAAGATAGCA+TGG | - | chr1.2:80872508-80872527 | None:intergenic | 25.0% |
! | AGTTTGTAAAACCTGTTATA+AGG | - | chr1.2:80871916-80871935 | None:intergenic | 25.0% |
! | ATAACATTTAGACTTATCAG+AGG | - | chr1.2:80871576-80871595 | None:intergenic | 25.0% |
! | GTTATAGTAGATAGTTTACA+TGG | + | chr1.2:80871591-80871610 | MS.gene029498:CDS | 25.0% |
! | GTTTGTAAAACCTGTTATAA+GGG | - | chr1.2:80871915-80871934 | None:intergenic | 25.0% |
! | TGGAATTCCAAAAACATAAT+AGG | - | chr1.2:80871798-80871817 | None:intergenic | 25.0% |
! | TTTGTACATATCAAACAGTT+TGG | + | chr1.2:80869560-80869579 | MS.gene029498:intron | 25.0% |
!! | AATTCCAATTGCTGTTATAT+TGG | + | chr1.2:80871811-80871830 | MS.gene029498:CDS | 25.0% |
!! | ACACTATTTTACTCATTCAT+AGG | - | chr1.2:80869045-80869064 | None:intergenic | 25.0% |
!! | ATTCCAATTGCTGTTATATT+GGG | + | chr1.2:80871812-80871831 | MS.gene029498:CDS | 25.0% |
!! | CACATACCTAATATAAGTTT+TGG | + | chr1.2:80869088-80869107 | MS.gene029498:intron | 25.0% |
!! | CATTCAATATCAAACTTGTT+GGG | - | chr1.2:80869361-80869380 | None:intergenic | 25.0% |
!! | TATAACAGGTTTTACAAACT+GGG | + | chr1.2:80871916-80871935 | MS.gene029498:CDS | 25.0% |
!! | TTATAACAGGTTTTACAAAC+TGG | + | chr1.2:80871915-80871934 | MS.gene029498:CDS | 25.0% |
!!! | ACACAAATTTTAAGACACAA+AGG | - | chr1.2:80871120-80871139 | None:intergenic | 25.0% |
!!! | ATTATTTCAATGATGATGGT+TGG | + | chr1.2:80868726-80868745 | MS.gene029498:CDS | 25.0% |
!!! | ATTCAATATCAAACTTGTTG+GGG | - | chr1.2:80869360-80869379 | None:intergenic | 25.0% |
!!! | TGAATGTGTAATTTGTTTGT+TGG | + | chr1.2:80869375-80869394 | MS.gene029498:intron | 25.0% |
!!! | TGTTATTTTGATTCATTCAG+AGG | - | chr1.2:80869655-80869674 | None:intergenic | 25.0% |
!!! | TTCGATTAGTTAGTTTTGTT+GGG | + | chr1.2:80868990-80869009 | MS.gene029498:intron | 25.0% |
!!! | TTGAAGTTTTGATACATTGA+AGG | + | chr1.2:80869438-80869457 | MS.gene029498:intron | 25.0% |
!!! | TTTCGATTAGTTAGTTTTGT+TGG | + | chr1.2:80868989-80869008 | MS.gene029498:intron | 25.0% |
!!! | TTTTATACTATTAGCTTGAC+AGG | - | chr1.2:80872359-80872378 | None:intergenic | 25.0% |
!!! | TTTTTTTTAGGATGAAGAGA+TGG | - | chr1.2:80869783-80869802 | None:intergenic | 25.0% |
AAAAGTGGCATTATACCATA+TGG | - | chr1.2:80871075-80871094 | None:intergenic | 30.0% | |
AAACCCAATATAACAGCAAT+TGG | - | chr1.2:80871818-80871837 | None:intergenic | 30.0% | |
AAGATCCATAATAGAGATAG+AGG | - | chr1.2:80870200-80870219 | None:intergenic | 30.0% | |
ATATGAAAGACGAAGAAAAG+TGG | - | chr1.2:80871090-80871109 | None:intergenic | 30.0% | |
ATCAAGTAGTTGCAAGTATA+TGG | + | chr1.2:80870766-80870785 | MS.gene029498:intron | 30.0% | |
ATCTCTATTATGGATCTTCT+TGG | + | chr1.2:80870202-80870221 | MS.gene029498:CDS | 30.0% | |
CCAAATGAAACAATATGAGA+CGG | + | chr1.2:80870887-80870906 | MS.gene029498:intron | 30.0% | |
GCAATTAATTTCGTATAGGT+TGG | - | chr1.2:80869526-80869545 | None:intergenic | 30.0% | |
TACTAATAGAAGACACATTC+AGG | + | chr1.2:80869911-80869930 | MS.gene029498:intron | 30.0% | |
TCTCTATTATGGATCTTCTT+GGG | + | chr1.2:80870203-80870222 | MS.gene029498:CDS | 30.0% | |
TGCATGAATGAATTATGCTA+TGG | + | chr1.2:80871685-80871704 | MS.gene029498:intron | 30.0% | |
TGGTTGAATGTGATTATACT+TGG | + | chr1.2:80870485-80870504 | MS.gene029498:CDS | 30.0% | |
TGTACACTAAACAGTCATTT+AGG | + | chr1.2:80869592-80869611 | MS.gene029498:intron | 30.0% | |
TTATGTATTTAGCAATGAGC+AGG | + | chr1.2:80871521-80871540 | MS.gene029498:CDS | 30.0% | |
TTTCTATTGGTACTTCATAC+TGG | + | chr1.2:80870465-80870484 | MS.gene029498:CDS | 30.0% | |
TTTGTGCATATCAAACAGTT+TGG | + | chr1.2:80870062-80870081 | MS.gene029498:intron | 30.0% | |
! | AAACTTCAGTCTTATCCATA+TGG | + | chr1.2:80871057-80871076 | MS.gene029498:CDS | 30.0% |
! | TCTTAAGGCATTAGGTATAT+AGG | - | chr1.2:80869282-80869301 | None:intergenic | 30.0% |
! | TTATATACAGGTATTGCTAG+AGG | + | chr1.2:80871731-80871750 | MS.gene029498:intron | 30.0% |
! | TTGAAGTTCTGATTCATTGA+AGG | + | chr1.2:80869941-80869960 | MS.gene029498:intron | 30.0% |
! | TTTTACAAACTGGGAAAAAC+AGG | + | chr1.2:80871925-80871944 | MS.gene029498:CDS | 30.0% |
!!! | ACCTAATATAAGTTTTGGGT+GGG | + | chr1.2:80869093-80869112 | MS.gene029498:intron | 30.0% |
!!! | ACTTGTGTTTTTAGAGTAAG+CGG | - | chr1.2:80872269-80872288 | None:intergenic | 30.0% |
!!! | TACCTAATATAAGTTTTGGG+TGG | + | chr1.2:80869092-80869111 | MS.gene029498:intron | 30.0% |
!!! | TGGCTGTTAGTTTTTAAATC+TGG | + | chr1.2:80870419-80870438 | MS.gene029498:CDS | 30.0% |
!!! | TTAGTTTTGTGTTTCTTTCC+CGG | + | chr1.2:80870922-80870941 | MS.gene029498:intron | 30.0% |
AAACAATATGAGACGGAGAA+AGG | + | chr1.2:80870894-80870913 | MS.gene029498:intron | 35.0% | |
AAGGATATTTCAAGGAAGAC+AGG | + | chr1.2:80872608-80872627 | MS.gene029498:CDS | 35.0% | |
AAGTAGTTGCAAGTATATGG+TGG | + | chr1.2:80870769-80870788 | MS.gene029498:intron | 35.0% | |
AATCATGGCTGAAAATCAAC+CGG | - | chr1.2:80870944-80870963 | None:intergenic | 35.0% | |
ACAGAGGAACTTATAACAAG+AGG | - | chr1.2:80870371-80870390 | None:intergenic | 35.0% | |
ACCAGAGTTTCAAATGCATT+AGG | + | chr1.2:80871387-80871406 | MS.gene029498:CDS | 35.0% | |
ACCTAATGCCTTAAGACTTT+GGG | + | chr1.2:80869286-80869305 | MS.gene029498:intron | 35.0% | |
AGAAAAAAAGCCAACCTGAA+AGG | - | chr1.2:80871620-80871639 | None:intergenic | 35.0% | |
AGAGTTTCAAATGCATTAGG+AGG | + | chr1.2:80871390-80871409 | MS.gene029498:CDS | 35.0% | |
AGGAAGTAAGATGTAAAAGG+AGG | - | chr1.2:80870639-80870658 | None:intergenic | 35.0% | |
AGGAGGAAGTAAGATGTAAA+AGG | - | chr1.2:80870642-80870661 | None:intergenic | 35.0% | |
ATACATAACCTAACACCTTC+CGG | - | chr1.2:80871509-80871528 | None:intergenic | 35.0% | |
ATGAGACACATAATACGTGA+AGG | - | chr1.2:80870662-80870681 | None:intergenic | 35.0% | |
ATTTGATCCTTAGTTGTGTG+AGG | + | chr1.2:80872027-80872046 | MS.gene029498:intron | 35.0% | |
CAAAAACATAATAGGCTCCA+AGG | - | chr1.2:80871790-80871809 | None:intergenic | 35.0% | |
CACTAATTGTGAAGAAACTC+GGG | + | chr1.2:80870526-80870545 | MS.gene029498:CDS | 35.0% | |
CATAATTCATTCATGCAGCA+GGG | - | chr1.2:80871682-80871701 | None:intergenic | 35.0% | |
CCACTAATTGTGAAGAAACT+CGG | + | chr1.2:80870525-80870544 | MS.gene029498:CDS | 35.0% | |
CCGTCTCATATTGTTTCATT+TGG | - | chr1.2:80870890-80870909 | None:intergenic | 35.0% | |
CGAATAATAAATGAGGTACG+AGG | + | chr1.2:80870793-80870812 | MS.gene029498:intron | 35.0% | |
GAAAAAAAGCCAACCTGAAA+GGG | - | chr1.2:80871619-80871638 | None:intergenic | 35.0% | |
GGAAGTAAGATGTAAAAGGA+GGG | - | chr1.2:80870638-80870657 | None:intergenic | 35.0% | |
GTCTTCCTCTATCTCTATTA+TGG | + | chr1.2:80870192-80870211 | MS.gene029498:CDS | 35.0% | |
GTGAAAATATTTAGCCTGAC+AGG | - | chr1.2:80872423-80872442 | None:intergenic | 35.0% | |
TAAGATCAAGAAATCCTGTC+AGG | + | chr1.2:80872406-80872425 | MS.gene029498:intron | 35.0% | |
TACCTAATGCCTTAAGACTT+TGG | + | chr1.2:80869285-80869304 | MS.gene029498:intron | 35.0% | |
TATACAATTCCAGAAGCAAC+TGG | + | chr1.2:80871251-80871270 | MS.gene029498:CDS | 35.0% | |
TATTATGGATCTTCTTGGGA+AGG | + | chr1.2:80870207-80870226 | MS.gene029498:CDS | 35.0% | |
TCAAACAGAACTAGCATCTT+AGG | + | chr1.2:80872482-80872501 | MS.gene029498:intron | 35.0% | |
TCAATGCAAAAAACGTGTCA+AGG | - | chr1.2:80870828-80870847 | None:intergenic | 35.0% | |
TGCAACTACTTGATAAACGA+GGG | - | chr1.2:80870760-80870779 | None:intergenic | 35.0% | |
TTGATAAACGAGGGTAACAT+CGG | - | chr1.2:80870751-80870770 | None:intergenic | 35.0% | |
TTGCAACTACTTGATAAACG+AGG | - | chr1.2:80870761-80870780 | None:intergenic | 35.0% | |
TTGTTAGAGAAAGACAGAGA+AGG | + | chr1.2:80868597-80868616 | MS.gene029498:CDS | 35.0% | |
TTTCATACTAGTGCCAAATG+TGG | - | chr1.2:80871990-80872009 | None:intergenic | 35.0% | |
! | AAATCTGGATTAGGTTGCTT+AGG | + | chr1.2:80870434-80870453 | MS.gene029498:CDS | 35.0% |
! | ACAAATAAAAGGCGCATTTG+AGG | + | chr1.2:80872173-80872192 | MS.gene029498:intron | 35.0% |
! | CAAATAAAAGGCGCATTTGA+GGG | + | chr1.2:80872174-80872193 | MS.gene029498:intron | 35.0% |
! | CTAACCTTTTACCCATTCAT+AGG | - | chr1.2:80869244-80869263 | None:intergenic | 35.0% |
! | CTTGGAGCCTATTATGTTTT+TGG | + | chr1.2:80871788-80871807 | MS.gene029498:CDS | 35.0% |
! | TCCTAATGCATTTGAAACTC+TGG | - | chr1.2:80871391-80871410 | None:intergenic | 35.0% |
! | TGGTGGACGAATAATAAATG+AGG | + | chr1.2:80870786-80870805 | MS.gene029498:intron | 35.0% |
! | TGGTTCAAGAAGCATAACAT+GGG | + | chr1.2:80868620-80868639 | MS.gene029498:CDS | 35.0% |
! | TGGTTTGAGTTAAGAGGAAA+AGG | + | chr1.2:80871839-80871858 | MS.gene029498:CDS | 35.0% |
! | TTATCATTTTCAGCCTTGAG+TGG | + | chr1.2:80870979-80870998 | MS.gene029498:intron | 35.0% |
! | TTGCTGTTATATTGGGTTTC+TGG | + | chr1.2:80871819-80871838 | MS.gene029498:CDS | 35.0% |
! | TTTTGGTCTCTAAATCTGTG+AGG | - | chr1.2:80869982-80870001 | None:intergenic | 35.0% |
!!! | CCTAATATAAGTTTTGGGTG+GGG | + | chr1.2:80869094-80869113 | MS.gene029498:intron | 35.0% |
AACTCGGGTTCCAATTTCAA+TGG | + | chr1.2:80870541-80870560 | MS.gene029498:CDS | 40.0% | |
AACTCTCCTATTCCAAGGAA+TGG | - | chr1.2:80870569-80870588 | None:intergenic | 40.0% | |
AAGACTGAAGTTTCAAGCTG+TGG | - | chr1.2:80871050-80871069 | None:intergenic | 40.0% | |
ACAGCCAACAAAAAGCTACA+TGG | - | chr1.2:80870406-80870425 | None:intergenic | 40.0% | |
AGACACATAATACGTGAAGG+AGG | - | chr1.2:80870659-80870678 | None:intergenic | 40.0% | |
AGACTGAAGTTTCAAGCTGT+GGG | - | chr1.2:80871049-80871068 | None:intergenic | 40.0% | |
AGGAATGGCTCCATTGAAAT+TGG | - | chr1.2:80870554-80870573 | None:intergenic | 40.0% | |
AGGTCTTCTTTGTCTTGTAC+TGG | + | chr1.2:80869753-80869772 | MS.gene029498:intron | 40.0% | |
AGTTAAGAGGAAAAGGACTG+TGG | + | chr1.2:80871846-80871865 | MS.gene029498:CDS | 40.0% | |
ATCATGGCTGAAAATCAACC+GGG | - | chr1.2:80870943-80870962 | None:intergenic | 40.0% | |
ATGGGGTGTATTTGTTCAAG+AGG | + | chr1.2:80868638-80868657 | MS.gene029498:CDS | 40.0% | |
ATGGGTTCTTGCTTATGTCA+GGG | + | chr1.2:80868882-80868901 | MS.gene029498:intron | 40.0% | |
ATTTAGCAATGAGCAGGATG+TGG | + | chr1.2:80871527-80871546 | MS.gene029498:CDS | 40.0% | |
ATTTCAATGGAGCCATTCCT+TGG | + | chr1.2:80870554-80870573 | MS.gene029498:CDS | 40.0% | |
CAGCTTCTTGTGAAATCAGA+GGG | - | chr1.2:80870256-80870275 | None:intergenic | 40.0% | |
CCCCACCCAAAACTTATATT+AGG | - | chr1.2:80869097-80869116 | None:intergenic | 40.0% | |
CCGAGTTTCTTCACAATTAG+TGG | - | chr1.2:80870528-80870547 | None:intergenic | 40.0% | |
CTGTGTCTTTGACATAAGCA+AGG | - | chr1.2:80869619-80869638 | None:intergenic | 40.0% | |
GAAAGAACTCTCCTATTCCA+AGG | - | chr1.2:80870574-80870593 | None:intergenic | 40.0% | |
GAACTCCTAATCCTTCTTTC+TGG | + | chr1.2:80871011-80871030 | MS.gene029498:CDS | 40.0% | |
GAAGACCAGAAAGAAGGATT+AGG | - | chr1.2:80871019-80871038 | None:intergenic | 40.0% | |
GACTAGCAAAAGACACATTC+AGG | - | chr1.2:80868949-80868968 | None:intergenic | 40.0% | |
GCATAATTCATTCATGCAGC+AGG | - | chr1.2:80871683-80871702 | None:intergenic | 40.0% | |
GTACAAGACAAAGAAGACCT+TGG | - | chr1.2:80869753-80869772 | None:intergenic | 40.0% | |
GTGTTTGGATCAAGTACAAG+AGG | + | chr1.2:80869177-80869196 | MS.gene029498:intron | 40.0% | |
GTTCAAAGAACACTCACAGA+AGG | - | chr1.2:80869729-80869748 | None:intergenic | 40.0% | |
GTTTCAAATGCATTAGGAGG+TGG | + | chr1.2:80871393-80871412 | MS.gene029498:CDS | 40.0% | |
TAATGCCTTAAGACTTTGGG+TGG | + | chr1.2:80869289-80869308 | MS.gene029498:intron | 40.0% | |
TACATAACCTAACACCTTCC+GGG | - | chr1.2:80871508-80871527 | None:intergenic | 40.0% | |
TACCAAATCATTCCTGCTGA+TGG | - | chr1.2:80870608-80870627 | None:intergenic | 40.0% | |
TACTCATTCATAGGCGATGT+GGG | - | chr1.2:80869036-80869055 | None:intergenic | 40.0% | |
TATGACTGTTGCAGTTTCTG+AGG | + | chr1.2:80871452-80871471 | MS.gene029498:CDS | 40.0% | |
TATGGGTTCTTGCTTATGTC+AGG | + | chr1.2:80868881-80868900 | MS.gene029498:intron | 40.0% | |
TGAGTGTTCTTTGAACTCCA+AGG | + | chr1.2:80869733-80869752 | MS.gene029498:intron | 40.0% | |
TGCACACTGAAGAGTCATAT+GGG | + | chr1.2:80868864-80868883 | MS.gene029498:intron | 40.0% | |
TGTGCACTTGAAACTCAATG+CGG | + | chr1.2:80870092-80870111 | MS.gene029498:CDS | 40.0% | |
TTACTCATTCATAGGCGATG+TGG | - | chr1.2:80869037-80869056 | None:intergenic | 40.0% | |
TTAGAGAAAGACAGAGAAGG+TGG | + | chr1.2:80868600-80868619 | MS.gene029498:CDS | 40.0% | |
TTAGGAGCTGCACTTTCTAT+TGG | + | chr1.2:80870452-80870471 | MS.gene029498:CDS | 40.0% | |
TTCCATCAGCAGGAATGATT+TGG | + | chr1.2:80870603-80870622 | MS.gene029498:CDS | 40.0% | |
TTGCACACTGAAGAGTCATA+TGG | + | chr1.2:80868863-80868882 | MS.gene029498:intron | 40.0% | |
TTGGAAGAAGACCAGAAAGA+AGG | - | chr1.2:80871025-80871044 | None:intergenic | 40.0% | |
TTGGATCAAGTACAAGAGGT+GGG | + | chr1.2:80869181-80869200 | MS.gene029498:intron | 40.0% | |
TTTGGATCAAGTACAAGAGG+TGG | + | chr1.2:80869180-80869199 | MS.gene029498:intron | 40.0% | |
! | AAAAAGCTACATGGAAGCAC+AGG | - | chr1.2:80870397-80870416 | None:intergenic | 40.0% |
! | AAAAGCTACATGGAAGCACA+GGG | - | chr1.2:80870396-80870415 | None:intergenic | 40.0% |
! | ACCCAAAGTCTTAAGGCATT+AGG | - | chr1.2:80869290-80869309 | None:intergenic | 40.0% |
! | ATGTGCCATTCACTAGTTTG+AGG | + | chr1.2:80869688-80869707 | MS.gene029498:intron | 40.0% |
! | CTTTTGCTAGCCCTTATAAC+AGG | + | chr1.2:80871902-80871921 | MS.gene029498:CDS | 40.0% |
! | GACATTGCCTCACAGTTTTA+GGG | + | chr1.2:80869469-80869488 | MS.gene029498:intron | 40.0% |
! | GCTTCCATGTAGCTTTTTGT+TGG | + | chr1.2:80870399-80870418 | MS.gene029498:CDS | 40.0% |
! | GGTTCAAGAAGCATAACATG+GGG | + | chr1.2:80868621-80868640 | MS.gene029498:CDS | 40.0% |
! | GTGGTTCAAGAAGCATAACA+TGG | + | chr1.2:80868619-80868638 | MS.gene029498:CDS | 40.0% |
! | GTGTGTGTTGTTGGTCAATT+TGG | + | chr1.2:80872135-80872154 | MS.gene029498:intron | 40.0% |
! | TGACATTGCCTCACAGTTTT+AGG | + | chr1.2:80869468-80869487 | MS.gene029498:intron | 40.0% |
! | TGTGCCATTCACTAGTTTGA+GGG | + | chr1.2:80869689-80869708 | MS.gene029498:intron | 40.0% |
! | TTTAGAGTAAGCGGTCAGTT+TGG | - | chr1.2:80872260-80872279 | None:intergenic | 40.0% |
! | TTTTGGTCCCTAAAACTGTG+AGG | - | chr1.2:80869479-80869498 | None:intergenic | 40.0% |
!! | AATGATGATGGTTGGTCGTT+TGG | + | chr1.2:80868734-80868753 | MS.gene029498:CDS | 40.0% |
!! | ATGATGATGGTTGGTCGTTT+GGG | + | chr1.2:80868735-80868754 | MS.gene029498:CDS | 40.0% |
!! | CATAAAGTAAGAGTGCCGTT+TGG | + | chr1.2:80869805-80869824 | MS.gene029498:intron | 40.0% |
!! | GGTGGACTATGTCACATATA+TGG | + | chr1.2:80871548-80871567 | MS.gene029498:CDS | 40.0% |
!! | GGTTTCTGGTTTGAGTTAAG+AGG | + | chr1.2:80871833-80871852 | MS.gene029498:CDS | 40.0% |
!! | GTTTTGTTGGGTTCAAGTGT+GGG | + | chr1.2:80869002-80869021 | MS.gene029498:intron | 40.0% |
!! | TAGCAAAAGTGCTTGACAGA+AGG | - | chr1.2:80871891-80871910 | None:intergenic | 40.0% |
!!! | AGTTTTGTTGGGTTCAAGTG+TGG | + | chr1.2:80869001-80869020 | MS.gene029498:intron | 40.0% |
!!! | GGAAGGCTGTTGATTTTACT+CGG | + | chr1.2:80870224-80870243 | MS.gene029498:CDS | 40.0% |
ACCTCCCTCAAACTAGTGAA+TGG | - | chr1.2:80869696-80869715 | None:intergenic | 45.0% | |
ACGAGGGTAACATCGGAAAA+AGG | - | chr1.2:80870744-80870763 | None:intergenic | 45.0% | |
ACTCAATGCGGACAAGCTTA+TGG | + | chr1.2:80870104-80870123 | MS.gene029498:CDS | 45.0% | |
AGAACCGAACTGACTAACGA+AGG | - | chr1.2:80872112-80872131 | None:intergenic | 45.0% | |
AGAGGAAAAGGACTGTGGAT+TGG | + | chr1.2:80871851-80871870 | MS.gene029498:CDS | 45.0% | |
AGGGCCTATGAATGGGTAAA+AGG | + | chr1.2:80869237-80869256 | MS.gene029498:intron | 45.0% | |
AGTTTACATGGCACCCTTTC+AGG | + | chr1.2:80871603-80871622 | MS.gene029498:CDS | 45.0% | |
ATGGAGCCATTCCTTGGAAT+AGG | + | chr1.2:80870560-80870579 | MS.gene029498:CDS | 45.0% | |
CCAGCTTCTTGTGAAATCAG+AGG | - | chr1.2:80870257-80870276 | None:intergenic | 45.0% | |
CCTCTGATTTCACAAGAAGC+TGG | + | chr1.2:80870254-80870273 | MS.gene029498:CDS | 45.0% | |
CGAGAGATTGTTGAGTTCGA+GGG | + | chr1.2:80869218-80869237 | MS.gene029498:intron | 45.0% | |
GAAGTTTCAAGCTGTGGGTT+TGG | - | chr1.2:80871044-80871063 | None:intergenic | 45.0% | |
GACAAAGTGACAGCGATCAT+AGG | - | chr1.2:80868690-80868709 | None:intergenic | 45.0% | |
GAGGAAAAGGACTGTGGATT+GGG | + | chr1.2:80871852-80871871 | MS.gene029498:CDS | 45.0% | |
GCACGGGAAAGGATATTTCA+AGG | + | chr1.2:80872600-80872619 | MS.gene029498:CDS | 45.0% | |
GCTATTGCTATCTCTCTCTG+TGG | + | chr1.2:80868780-80868799 | MS.gene029498:CDS | 45.0% | |
GTATTGCTAGAGGATCTGGT+TGG | + | chr1.2:80871741-80871760 | MS.gene029498:CDS | 45.0% | |
GTTCAAATGACCACCACTCA+AGG | - | chr1.2:80870995-80871014 | None:intergenic | 45.0% | |
GTTTGGTCGCTAAATGTGTG+AGG | - | chr1.2:80872243-80872262 | None:intergenic | 45.0% | |
TAGGACCACCCAAAGTCTTA+AGG | - | chr1.2:80869297-80869316 | None:intergenic | 45.0% | |
! | ACAGGTATTGCTAGAGGATC+TGG | + | chr1.2:80871737-80871756 | MS.gene029498:intron | 45.0% |
! | TCATTTTCAGCCTTGAGTGG+TGG | + | chr1.2:80870982-80871001 | MS.gene029498:intron | 45.0% |
! | TTGGGAGCATATGTGAACCT+TGG | + | chr1.2:80871770-80871789 | MS.gene029498:CDS | 45.0% |
!! | ACTGTGGATTGGGATACTTG+TGG | + | chr1.2:80871862-80871881 | MS.gene029498:CDS | 45.0% |
!! | ATCAAACTTGTTGGGGAGTC+CGG | - | chr1.2:80869353-80869372 | None:intergenic | 45.0% |
!! | CTGTGGATTGGGATACTTGT+GGG | + | chr1.2:80871863-80871882 | MS.gene029498:CDS | 45.0% |
!!! | ATAAGTTTTGGGTGGGGATG+TGG | + | chr1.2:80869100-80869119 | MS.gene029498:intron | 45.0% |
!! | TAAATAAAATTACAAATAAA+AGG | + | chr1.2:80872162-80872181 | MS.gene029498:intron | 5.0% |
!!! | TTATTTGTAATTTTATTTAT+GGG | - | chr1.2:80872161-80872180 | None:intergenic | 5.0% |
!!! | TTTATTTGTAATTTTATTTA+TGG | - | chr1.2:80872162-80872181 | None:intergenic | 5.0% |
AGGATCTGGTTGGCAGAAGT+TGG | + | chr1.2:80871751-80871770 | MS.gene029498:CDS | 50.0% | |
AGGCAATCAAAGCACGGGAA+AGG | + | chr1.2:80872589-80872608 | MS.gene029498:intron | 50.0% | |
AGGCAGAGCCACAAAGACTT+AGG | - | chr1.2:80871963-80871982 | None:intergenic | 50.0% | |
ATAACCTAACACCTTCCGGG+AGG | - | chr1.2:80871505-80871524 | None:intergenic | 50.0% | |
ATCTCTCTCTGTGGTGTCTC+TGG | + | chr1.2:80868789-80868808 | MS.gene029498:CDS | 50.0% | |
CAACAACGAGCCAATGCTCT+AGG | - | chr1.2:80869316-80869335 | None:intergenic | 50.0% | |
CAGAGCAGGAATCATGCACA+TGG | - | chr1.2:80870288-80870307 | None:intergenic | 50.0% | |
CCACAAAGACTTAGGAGCGA+AGG | - | chr1.2:80871955-80871974 | None:intergenic | 50.0% | |
CCTTCGCTCCTAAGTCTTTG+TGG | + | chr1.2:80871952-80871971 | MS.gene029498:intron | 50.0% | |
CGATACGCTATTCCATCAGC+AGG | + | chr1.2:80870593-80870612 | MS.gene029498:CDS | 50.0% | |
CTAGTGCCAAATGTGGAGTG+AGG | - | chr1.2:80871983-80872002 | None:intergenic | 50.0% | |
GACTAACGAAGGTCGCGTTT+AGG | - | chr1.2:80872101-80872120 | None:intergenic | 50.0% | |
GAGTTCGAGGGCCTATGAAT+GGG | + | chr1.2:80869230-80869249 | MS.gene029498:intron | 50.0% | |
GCGACCTTCGTTAGTCAGTT+CGG | + | chr1.2:80872105-80872124 | MS.gene029498:intron | 50.0% | |
GCGAGAGATTGTTGAGTTCG+AGG | + | chr1.2:80869217-80869236 | MS.gene029498:intron | 50.0% | |
GGATCTGGTTGGCAGAAGTT+GGG | + | chr1.2:80871752-80871771 | MS.gene029498:CDS | 50.0% | |
GGTTCTCGAGTGTGTGTTGT+TGG | + | chr1.2:80872126-80872145 | MS.gene029498:intron | 50.0% | |
GTTGCATAGGCAAACAGAGC+AGG | - | chr1.2:80870302-80870321 | None:intergenic | 50.0% | |
GTTTGCCTATGCAACGCTTC+AGG | + | chr1.2:80870307-80870326 | MS.gene029498:CDS | 50.0% | |
TAGCAATGAGCAGGATGTGG+TGG | + | chr1.2:80871530-80871549 | MS.gene029498:CDS | 50.0% | |
TGAGTTCGAGGGCCTATGAA+TGG | + | chr1.2:80869229-80869248 | MS.gene029498:intron | 50.0% | |
TTGTTGGGTTCAAGTGTGGG+TGG | + | chr1.2:80869005-80869024 | MS.gene029498:intron | 50.0% | |
TTTGGGTGGTCCTAGAGCAT+TGG | + | chr1.2:80869303-80869322 | MS.gene029498:intron | 50.0% | |
! | ATGGAAGCACAGGGTAACAG+AGG | - | chr1.2:80870387-80870406 | None:intergenic | 50.0% |
! | GCCATTCACTAGTTTGAGGG+AGG | + | chr1.2:80869692-80869711 | MS.gene029498:intron | 50.0% |
! | TACATGGCACCCTTTCAGGT+TGG | + | chr1.2:80871607-80871626 | MS.gene029498:intron | 50.0% |
!! | CATTGGCTCGTTGTTGCTCT+AGG | + | chr1.2:80869320-80869339 | MS.gene029498:intron | 50.0% |
!! | TCAAACTTGTTGGGGAGTCC+GGG | - | chr1.2:80869352-80869371 | None:intergenic | 50.0% |
ACAGACAATCGCGCTGCTTG+TGG | - | chr1.2:80871423-80871442 | None:intergenic | 55.0% | |
CCCTACATGGCAACGCTTCA+GGG | - | chr1.2:80869140-80869159 | None:intergenic | 55.0% | |
CTATGCAACGCTTCAGGCAC+TGG | + | chr1.2:80870313-80870332 | MS.gene029498:CDS | 55.0% | |
GACAGCGCCTCACACAACTA+AGG | - | chr1.2:80872037-80872056 | None:intergenic | 55.0% | |
GCTCTGCCTCACTCCACATT+TGG | + | chr1.2:80871974-80871993 | MS.gene029498:intron | 55.0% | |
! | AAGCAACTGGCTCAGCAGCA+AGG | + | chr1.2:80871264-80871283 | MS.gene029498:CDS | 55.0% |
! | GTTCCACCATTTTCGCCTCC+CGG | + | chr1.2:80871487-80871506 | MS.gene029498:CDS | 55.0% |
!! | AAACTTGTTGGGGAGTCCGG+GGG | - | chr1.2:80869350-80869369 | None:intergenic | 55.0% |
!! | CAAACTTGTTGGGGAGTCCG+GGG | - | chr1.2:80869351-80869370 | None:intergenic | 55.0% |
!! | CAGTGCCTGAAGCGTTGCAT+AGG | - | chr1.2:80870315-80870334 | None:intergenic | 55.0% |
!! | CCCTGAAGCGTTGCCATGTA+GGG | + | chr1.2:80869137-80869156 | MS.gene029498:intron | 55.0% |
!! | CCTGAAGCGTTGCCATGTAG+GGG | + | chr1.2:80869138-80869157 | MS.gene029498:intron | 55.0% |
AGCGTTGCCATGTAGGGGAG+TGG | + | chr1.2:80869143-80869162 | MS.gene029498:intron | 60.0% | |
CACCTTCCGGGAGGCGAAAA+TGG | - | chr1.2:80871496-80871515 | None:intergenic | 60.0% | |
CCCCTACATGGCAACGCTTC+AGG | - | chr1.2:80869141-80869160 | None:intergenic | 60.0% | |
CTTCCGGGAGGCGAAAATGG+TGG | - | chr1.2:80871493-80871512 | None:intergenic | 60.0% | |
GCGTTGCCATGTAGGGGAGT+GGG | + | chr1.2:80869144-80869163 | MS.gene029498:intron | 60.0% | |
GCTGCTGAGCCAGTTGCTTC+TGG | - | chr1.2:80871263-80871282 | None:intergenic | 60.0% | |
GGGATGTGGCGTCTATCTCG+TGG | + | chr1.2:80869114-80869133 | MS.gene029498:intron | 60.0% | |
TAGGGGAGTGGGAGGGGATA+GGG | + | chr1.2:80869155-80869174 | MS.gene029498:intron | 60.0% | |
TGCCATGTAGGGGAGTGGGA+GGG | + | chr1.2:80869148-80869167 | MS.gene029498:intron | 60.0% | |
TTGCCATGTAGGGGAGTGGG+AGG | + | chr1.2:80869147-80869166 | MS.gene029498:intron | 60.0% | |
! | CACCATTTTCGCCTCCCGGA+AGG | + | chr1.2:80871491-80871510 | MS.gene029498:CDS | 60.0% |
! | GTGGGAGGGGATAGGGTGTT+TGG | + | chr1.2:80869162-80869181 | MS.gene029498:intron | 60.0% |
! | TGTTGCTCTAGGCACTCCCC+CGG | + | chr1.2:80869331-80869350 | MS.gene029498:intron | 60.0% |
!! | GCCCTGAAGCGTTGCCATGT+AGG | + | chr1.2:80869136-80869155 | MS.gene029498:intron | 60.0% |
!! | TTCGCCTCCCGGAAGGTGTT+AGG | + | chr1.2:80871498-80871517 | MS.gene029498:CDS | 60.0% |
GCCATGTAGGGGAGTGGGAG+GGG | + | chr1.2:80869149-80869168 | MS.gene029498:intron | 65.0% | |
GTAGGGGAGTGGGAGGGGAT+AGG | + | chr1.2:80869154-80869173 | MS.gene029498:intron | 65.0% | |
TCCCCTCCCACTCCCCTACA+TGG | - | chr1.2:80869153-80869172 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 80868585 | 80872644 | 80868585 | ID=MS.gene029498 |
chr1.2 | mRNA | 80868585 | 80872644 | 80868585 | ID=MS.gene029498.t1;Parent=MS.gene029498 |
chr1.2 | exon | 80868585 | 80868824 | 80868585 | ID=MS.gene029498.t1.exon1;Parent=MS.gene029498.t1 |
chr1.2 | CDS | 80868585 | 80868824 | 80868585 | ID=cds.MS.gene029498.t1;Parent=MS.gene029498.t1 |
chr1.2 | exon | 80870080 | 80870624 | 80870080 | ID=MS.gene029498.t1.exon2;Parent=MS.gene029498.t1 |
chr1.2 | CDS | 80870080 | 80870624 | 80870080 | ID=cds.MS.gene029498.t1;Parent=MS.gene029498.t1 |
chr1.2 | exon | 80870992 | 80871078 | 80870992 | ID=MS.gene029498.t1.exon3;Parent=MS.gene029498.t1 |
chr1.2 | CDS | 80870992 | 80871078 | 80870992 | ID=cds.MS.gene029498.t1;Parent=MS.gene029498.t1 |
chr1.2 | exon | 80871229 | 80871285 | 80871229 | ID=MS.gene029498.t1.exon4;Parent=MS.gene029498.t1 |
chr1.2 | CDS | 80871229 | 80871285 | 80871229 | ID=cds.MS.gene029498.t1;Parent=MS.gene029498.t1 |
chr1.2 | exon | 80871386 | 80871624 | 80871386 | ID=MS.gene029498.t1.exon5;Parent=MS.gene029498.t1 |
chr1.2 | CDS | 80871386 | 80871624 | 80871386 | ID=cds.MS.gene029498.t1;Parent=MS.gene029498.t1 |
chr1.2 | exon | 80871741 | 80871946 | 80871741 | ID=MS.gene029498.t1.exon6;Parent=MS.gene029498.t1 |
chr1.2 | CDS | 80871741 | 80871946 | 80871741 | ID=cds.MS.gene029498.t1;Parent=MS.gene029498.t1 |
chr1.2 | exon | 80872591 | 80872644 | 80872591 | ID=MS.gene029498.t1.exon7;Parent=MS.gene029498.t1 |
chr1.2 | CDS | 80872591 | 80872644 | 80872591 | ID=cds.MS.gene029498.t1;Parent=MS.gene029498.t1 |
Gene Sequence |
Protein sequence |