Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034570.t1 | XP_013467697.1 | 99.4 | 309 | 2 | 0 | 1 | 309 | 1 | 309 | 2.30E-185 | 657.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034570.t1 | Q9M2P4 | 78.4 | 306 | 65 | 1 | 4 | 309 | 4 | 308 | 9.9e-145 | 514.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034570.t1 | A0A072VI80 | 99.4 | 309 | 2 | 0 | 1 | 309 | 1 | 309 | 1.7e-185 | 657.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034570 | MS.gene61205 | PPI |
| MS.gene034570 | MS.gene52683 | PPI |
| MS.gene98989 | MS.gene034570 | PPI |
| MS.gene96493 | MS.gene034570 | PPI |
| MS.gene018013 | MS.gene034570 | PPI |
| MS.gene034570 | MS.gene39144 | PPI |
| MS.gene055308 | MS.gene034570 | PPI |
| MS.gene034570 | MS.gene04647 | PPI |
| MS.gene90302 | MS.gene034570 | PPI |
| MS.gene64538 | MS.gene034570 | PPI |
| MS.gene034570 | MS.gene91723 | PPI |
| MS.gene50517 | MS.gene034570 | PPI |
| MS.gene034570 | MS.gene89107 | PPI |
| MS.gene034570 | MS.gene055974 | PPI |
| MS.gene36292 | MS.gene034570 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034570.t1 | MTR_1g054335 | 99.353 | 309 | 2 | 0 | 1 | 309 | 1 | 309 | 0.0 | 645 |
| MS.gene034570.t1 | MTR_7g093600 | 80.323 | 310 | 60 | 1 | 1 | 309 | 1 | 310 | 0.0 | 530 |
| MS.gene034570.t1 | MTR_1g008120 | 70.790 | 291 | 78 | 1 | 19 | 309 | 36 | 319 | 6.36e-156 | 439 |
| MS.gene034570.t1 | MTR_3g091510 | 74.717 | 265 | 67 | 0 | 45 | 309 | 47 | 311 | 2.87e-154 | 434 |
| MS.gene034570.t1 | MTR_3g017590 | 74.525 | 263 | 66 | 1 | 47 | 309 | 43 | 304 | 3.11e-152 | 429 |
| MS.gene034570.t1 | MTR_8g027520 | 70.438 | 274 | 81 | 0 | 36 | 309 | 31 | 304 | 2.50e-151 | 427 |
| MS.gene034570.t1 | MTR_8g027520 | 70.438 | 274 | 81 | 0 | 36 | 309 | 22 | 295 | 2.87e-151 | 426 |
| MS.gene034570.t1 | MTR_7g117415 | 71.863 | 263 | 74 | 0 | 47 | 309 | 50 | 312 | 1.05e-146 | 415 |
| MS.gene034570.t1 | MTR_8g038370 | 71.206 | 257 | 74 | 0 | 53 | 309 | 107 | 363 | 1.46e-145 | 414 |
| MS.gene034570.t1 | MTR_5g076660 | 26.957 | 230 | 152 | 5 | 43 | 266 | 12 | 231 | 1.47e-22 | 96.3 |
| MS.gene034570.t1 | MTR_7g024290 | 26.667 | 210 | 144 | 4 | 58 | 267 | 11 | 210 | 9.84e-20 | 88.2 |
| MS.gene034570.t1 | MTR_4g094468 | 36.090 | 133 | 78 | 3 | 57 | 189 | 96 | 221 | 1.02e-19 | 88.2 |
| MS.gene034570.t1 | MTR_5g067400 | 26.122 | 245 | 162 | 5 | 57 | 301 | 10 | 235 | 2.48e-19 | 87.0 |
| MS.gene034570.t1 | MTR_2g038430 | 31.783 | 129 | 83 | 2 | 58 | 183 | 25 | 151 | 8.02e-19 | 85.9 |
| MS.gene034570.t1 | MTR_5g076540 | 29.386 | 228 | 141 | 6 | 58 | 280 | 11 | 223 | 2.37e-18 | 82.8 |
| MS.gene034570.t1 | MTR_5g061290 | 25.909 | 220 | 150 | 7 | 58 | 276 | 18 | 225 | 3.12e-18 | 84.0 |
| MS.gene034570.t1 | MTR_7g094390 | 29.940 | 167 | 111 | 3 | 58 | 224 | 172 | 332 | 3.06e-17 | 82.4 |
| MS.gene034570.t1 | MTR_5g076370 | 25.957 | 235 | 160 | 7 | 71 | 305 | 47 | 267 | 6.77e-17 | 80.5 |
| MS.gene034570.t1 | MTR_2g038420 | 29.323 | 133 | 91 | 2 | 58 | 190 | 25 | 154 | 2.21e-16 | 79.0 |
| MS.gene034570.t1 | MTR_5g076520 | 31.579 | 171 | 111 | 3 | 54 | 224 | 7 | 171 | 1.21e-15 | 76.6 |
| MS.gene034570.t1 | MTR_1g046650 | 24.419 | 258 | 171 | 6 | 57 | 301 | 10 | 256 | 9.70e-15 | 73.9 |
| MS.gene034570.t1 | MTR_1g046650 | 24.419 | 258 | 171 | 6 | 57 | 301 | 41 | 287 | 1.10e-14 | 73.9 |
| MS.gene034570.t1 | MTR_5g076720 | 26.122 | 245 | 164 | 6 | 58 | 302 | 82 | 309 | 1.23e-14 | 74.3 |
| MS.gene034570.t1 | MTR_5g076820 | 25.100 | 251 | 154 | 8 | 58 | 301 | 19 | 242 | 1.24e-14 | 73.2 |
| MS.gene034570.t1 | MTR_1g046640 | 25.000 | 248 | 168 | 7 | 58 | 305 | 11 | 240 | 9.38e-14 | 70.9 |
| MS.gene034570.t1 | MTR_5g076505 | 29.060 | 117 | 80 | 2 | 74 | 190 | 23 | 136 | 2.66e-11 | 63.9 |
| MS.gene034570.t1 | MTR_1g046650 | 23.333 | 240 | 160 | 6 | 75 | 301 | 28 | 256 | 6.68e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034570.t1 | AT3G58040 | 77.994 | 309 | 67 | 1 | 1 | 309 | 1 | 308 | 0.0 | 507 |
| MS.gene034570.t1 | AT3G58040 | 77.994 | 309 | 67 | 1 | 1 | 309 | 1 | 308 | 0.0 | 507 |
| MS.gene034570.t1 | AT2G41980 | 77.670 | 309 | 65 | 2 | 1 | 309 | 1 | 305 | 3.60e-179 | 497 |
| MS.gene034570.t1 | AT4G27880 | 72.830 | 265 | 72 | 0 | 45 | 309 | 48 | 312 | 4.85e-152 | 429 |
| MS.gene034570.t1 | AT3G61790 | 75.290 | 259 | 64 | 0 | 51 | 309 | 53 | 311 | 5.64e-152 | 429 |
| MS.gene034570.t1 | AT5G53360 | 75.490 | 204 | 50 | 0 | 106 | 309 | 15 | 218 | 4.79e-118 | 339 |
| MS.gene034570.t1 | AT5G53360 | 75.490 | 204 | 50 | 0 | 106 | 309 | 15 | 218 | 4.79e-118 | 339 |
| MS.gene034570.t1 | AT3G58040 | 69.683 | 221 | 65 | 2 | 1 | 221 | 1 | 219 | 1.28e-108 | 315 |
| MS.gene034570.t1 | AT3G13672 | 54.857 | 175 | 76 | 1 | 138 | 309 | 38 | 212 | 2.09e-70 | 218 |
| MS.gene034570.t1 | AT3G13672 | 48.020 | 202 | 75 | 2 | 138 | 309 | 38 | 239 | 7.37e-65 | 204 |
| MS.gene034570.t1 | AT5G53360 | 74.528 | 106 | 27 | 0 | 204 | 309 | 60 | 165 | 1.81e-56 | 181 |
| MS.gene034570.t1 | AT5G37870 | 39.062 | 128 | 75 | 2 | 57 | 184 | 41 | 165 | 8.94e-25 | 101 |
| MS.gene034570.t1 | AT5G37930 | 38.806 | 134 | 79 | 2 | 57 | 190 | 109 | 239 | 3.64e-23 | 98.2 |
| MS.gene034570.t1 | AT5G37890 | 26.721 | 247 | 166 | 6 | 57 | 301 | 47 | 280 | 6.03e-21 | 90.9 |
| MS.gene034570.t1 | AT1G66620 | 41.489 | 94 | 55 | 0 | 57 | 150 | 40 | 133 | 3.06e-19 | 86.7 |
| MS.gene034570.t1 | AT5G62800 | 27.059 | 255 | 158 | 7 | 57 | 301 | 39 | 275 | 4.96e-19 | 86.7 |
| MS.gene034570.t1 | AT5G62800 | 28.037 | 214 | 130 | 5 | 57 | 260 | 39 | 238 | 9.81e-19 | 85.1 |
| MS.gene034570.t1 | AT5G37910 | 36.364 | 121 | 75 | 1 | 57 | 177 | 34 | 152 | 1.74e-18 | 84.0 |
| MS.gene034570.t1 | AT1G66650 | 35.556 | 135 | 82 | 3 | 57 | 188 | 82 | 214 | 6.43e-18 | 83.2 |
| MS.gene034570.t1 | AT1G66660 | 37.500 | 112 | 68 | 1 | 57 | 168 | 102 | 211 | 2.60e-17 | 81.6 |
| MS.gene034570.t1 | AT1G66630 | 36.885 | 122 | 73 | 2 | 57 | 176 | 45 | 164 | 1.42e-16 | 79.0 |
| MS.gene034570.t1 | AT1G66610 | 35.000 | 100 | 56 | 1 | 43 | 133 | 134 | 233 | 1.27e-13 | 69.7 |
| MS.gene034570.t1 | AT1G66610 | 44.444 | 63 | 35 | 0 | 57 | 119 | 52 | 114 | 7.33e-11 | 61.6 |
| MS.gene034570.t1 | AT1G66610 | 44.444 | 63 | 35 | 0 | 57 | 119 | 52 | 114 | 2.53e-11 | 64.3 |
Find 71 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAAATCAAGGGCTTGTT+TGG | 0.241684 | 1.3:+38499280 | MS.gene034570:CDS |
| TTTGACATAACGATGGTTAA+AGG | 0.268093 | 1.3:-38501267 | None:intergenic |
| AGAAAGAAGCAAAGAAATTT+AGG | 0.283423 | 1.3:+38501820 | MS.gene034570:CDS |
| CAAATAGCCGCAAACTTATA+TGG | 0.307974 | 1.3:+38501862 | MS.gene034570:CDS |
| CAAGTACGAACCTGATGAAT+TGG | 0.312951 | 1.3:-38499383 | None:intergenic |
| ATGTTCAAATTGTAAGATTA+CGG | 0.337638 | 1.3:+38500965 | MS.gene034570:CDS |
| CACTTTGAGGCGTTTCTACT+TGG | 0.338233 | 1.3:+38501753 | MS.gene034570:CDS |
| CCAACATGTCACCGTGATCT+TGG | 0.342485 | 1.3:+38501002 | MS.gene034570:CDS |
| TACATCAAATTCTTGCAAAC+AGG | 0.347642 | 1.3:-38499356 | None:intergenic |
| TGAGGGTCACTGGTCGTATA+TGG | 0.351201 | 1.3:+38502006 | MS.gene034570:CDS |
| GAATATAAGGTGTTTGGCTT+TGG | 0.353568 | 1.3:+38501025 | MS.gene034570:CDS |
| TCTCAAAATCTGAAAATATC+AGG | 0.364559 | 1.3:-38499217 | None:intergenic |
| GAACATAATGTGTGGCCATT+TGG | 0.366483 | 1.3:-38500948 | None:intergenic |
| CCTTGCAGATATCAGAATCT+AGG | 0.378860 | 1.3:+38501074 | MS.gene034570:CDS |
| AACATAATGTGTGGCCATTT+GGG | 0.389709 | 1.3:-38500947 | None:intergenic |
| TGCTTTAGCTTAGAGTGGTA+TGG | 0.391166 | 1.3:-38501113 | None:intergenic |
| TCTTGGGAATATAAGGTGTT+TGG | 0.396349 | 1.3:+38501019 | MS.gene034570:CDS |
| AAGTACGAACCTGATGAATT+GGG | 0.406932 | 1.3:-38499382 | None:intergenic |
| CAACATGTCACCGTGATCTT+GGG | 0.423076 | 1.3:+38501003 | MS.gene034570:CDS |
| CTGAATATTTCAATGGATCT+AGG | 0.429675 | 1.3:+38499161 | None:intergenic |
| CAAGATCACGGTGACATGTT+GGG | 0.450043 | 1.3:-38501001 | None:intergenic |
| ACCGTGATCTTGGGAATATA+AGG | 0.454771 | 1.3:+38501012 | MS.gene034570:CDS |
| CCAGCATAGGGGCAACTGTA+TGG | 0.454990 | 1.3:-38501158 | None:intergenic |
| GGAGAAAGTGGCGGAATCAA+TGG | 0.455505 | 1.3:+38501046 | MS.gene034570:CDS |
| AAATCAAGGGCTTGTTTGGA+TGG | 0.457064 | 1.3:+38499284 | MS.gene034570:CDS |
| CCATACAGTTGCCCCTATGC+TGG | 0.466797 | 1.3:+38501158 | MS.gene034570:CDS |
| ATAGTTCATTCACAAAATCA+AGG | 0.471657 | 1.3:+38499270 | MS.gene034570:CDS |
| TATTTGTTCCAGTGCCCAAA+TGG | 0.471812 | 1.3:+38500933 | MS.gene034570:intron |
| GCTTGTTTGGATGGAAAGAA+TGG | 0.472348 | 1.3:+38499293 | MS.gene034570:CDS |
| TTCCTTGCCATATAAGTTTG+CGG | 0.472513 | 1.3:-38501869 | None:intergenic |
| AATGGAAATCATTCAAAGAA+TGG | 0.473460 | 1.3:+38499311 | MS.gene034570:CDS |
| TCTGAATGATGAGTCCATCT+TGG | 0.475128 | 1.3:-38501935 | None:intergenic |
| TGGCACAGCTCCAGTTTACA+TGG | 0.477030 | 1.3:+38501773 | MS.gene034570:CDS |
| TGGTTCAAGAACTTCTTTGA+AGG | 0.477924 | 1.3:-38499192 | None:intergenic |
| TGACTCTCGCGAATGCTCCT+TGG | 0.482817 | 1.3:-38501894 | None:intergenic |
| CAATTAAAGTTGAGGGTCAC+TGG | 0.483429 | 1.3:+38501996 | MS.gene034570:CDS |
| GTGTTTGGCTTTGGAGAAAG+TGG | 0.490790 | 1.3:+38501034 | MS.gene034570:CDS |
| TTTAGGTATAGCTTAGAAGT+TGG | 0.491687 | 1.3:+38501837 | MS.gene034570:CDS |
| GCTTTAGCTTAGAGTGGTAT+GGG | 0.501913 | 1.3:-38501112 | None:intergenic |
| TAATTGTTGTTTATCGCCAC+CGG | 0.503340 | 1.3:-38501979 | None:intergenic |
| TAAACAACAATTAAAGTTGA+GGG | 0.518775 | 1.3:+38501989 | MS.gene034570:CDS |
| GAGCACTCTGATCCAGCATA+GGG | 0.522726 | 1.3:-38501170 | None:intergenic |
| GCTCATGCTTTAGCTTAGAG+TGG | 0.522927 | 1.3:-38501118 | None:intergenic |
| CCAAGATCACGGTGACATGT+TGG | 0.534401 | 1.3:-38501002 | None:intergenic |
| CCTTGTGATCATCCTTGAGA+TGG | 0.535656 | 1.3:-38501223 | None:intergenic |
| TGAACTATTGGAATTAGCCT+CGG | 0.540112 | 1.3:-38499255 | None:intergenic |
| AAAGTTCGTGACAGCCAAGA+TGG | 0.548328 | 1.3:+38501921 | MS.gene034570:CDS |
| CACAAGGTCGACGTACATGA+TGG | 0.550537 | 1.3:+38501239 | MS.gene034570:CDS |
| AGCCGCAAACTTATATGGCA+AGG | 0.559593 | 1.3:+38501867 | MS.gene034570:CDS |
| ATAAACAACAATTAAAGTTG+AGG | 0.561013 | 1.3:+38501988 | MS.gene034570:CDS |
| CACGGTGACATGTTGGGCAA+CGG | 0.570767 | 1.3:-38500995 | None:intergenic |
| TGCAAACAGGGCACTCAAGT+AGG | 0.572689 | 1.3:-38499343 | None:intergenic |
| AGAGCACTCTGATCCAGCAT+AGG | 0.575084 | 1.3:-38501171 | None:intergenic |
| TAGTTCATTCACAAAATCAA+GGG | 0.593181 | 1.3:+38499271 | MS.gene034570:CDS |
| TACAATTTGAACATAATGTG+TGG | 0.595926 | 1.3:-38500956 | None:intergenic |
| AAATCTGAAAATATCAGGTG+TGG | 0.607252 | 1.3:-38499212 | None:intergenic |
| CCATCTCAAGGATGATCACA+AGG | 0.608998 | 1.3:+38501223 | MS.gene034570:CDS |
| ACATCAAATTCTTGCAAACA+GGG | 0.610530 | 1.3:-38499355 | None:intergenic |
| TTATATGGCAAGGAATTCCA+AGG | 0.613859 | 1.3:+38501877 | MS.gene034570:CDS |
| ACCTTATATTCCCAAGATCA+CGG | 0.615283 | 1.3:-38501013 | None:intergenic |
| AGTACGAACCTGATGAATTG+GGG | 0.619005 | 1.3:-38499381 | None:intergenic |
| CCTAGATTCTGATATCTGCA+AGG | 0.629196 | 1.3:-38501074 | None:intergenic |
| AGCTCTTATGAACCATCTCA+AGG | 0.629365 | 1.3:+38501211 | MS.gene034570:CDS |
| TTTGGCTTTGGAGAAAGTGG+CGG | 0.652459 | 1.3:+38501037 | MS.gene034570:CDS |
| GACAGCTAAGTCTAAATCCG+AGG | 0.663173 | 1.3:+38499238 | MS.gene034570:CDS |
| AATATTTCAATGGATCTAGG+AGG | 0.676694 | 1.3:+38499164 | None:intergenic |
| GTACGAACCTGATGAATTGG+GGG | 0.683219 | 1.3:-38499380 | None:intergenic |
| GATTTGATTTGACATAACGA+TGG | 0.690993 | 1.3:-38501274 | None:intergenic |
| ATGAAGTTGAAAATGCCACA+TGG | 0.708825 | 1.3:+38501300 | MS.gene034570:CDS |
| AGCACTCTGATCCAGCATAG+GGG | 0.715799 | 1.3:-38501169 | None:intergenic |
| ACTTACAGTTAGCATCCATG+TGG | 0.763259 | 1.3:-38501315 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATTTAATAGACAT+TGG | - | chr1.3:38500074-38500093 | None:intergenic | 10.0% |
| !! | ATCTATTAAAATAAGTATTA+GGG | - | chr1.3:38500862-38500881 | None:intergenic | 10.0% |
| !!! | ATTTTTTTATGTTTAAATCA+TGG | - | chr1.3:38499517-38499536 | None:intergenic | 10.0% |
| !! | AAAAAATTAGCTAACATTTA+AGG | - | chr1.3:38500771-38500790 | None:intergenic | 15.0% |
| !! | AAAAATTAGCTAACATTTAA+GGG | - | chr1.3:38500770-38500789 | None:intergenic | 15.0% |
| !! | CATCTATTAAAATAAGTATT+AGG | - | chr1.3:38500863-38500882 | None:intergenic | 15.0% |
| !! | AACAAATAATTCAGTTATCA+AGG | - | chr1.3:38500921-38500940 | None:intergenic | 20.0% |
| !! | ACTTATTTGAACTTATCAAT+TGG | - | chr1.3:38499763-38499782 | None:intergenic | 20.0% |
| !! | AGAAATAATAGTAATTACCT+TGG | + | chr1.3:38500564-38500583 | MS.gene034570:intron | 20.0% |
| !! | ATAAACAACAATTAAAGTTG+AGG | + | chr1.3:38501988-38502007 | MS.gene034570:CDS | 20.0% |
| !! | ATGTTCAAATTGTAAGATTA+CGG | + | chr1.3:38500965-38500984 | MS.gene034570:CDS | 20.0% |
| !! | GAAATAATAGTAATTACCTT+GGG | + | chr1.3:38500565-38500584 | MS.gene034570:intron | 20.0% |
| !! | TAAACAACAATTAAAGTTGA+GGG | + | chr1.3:38501989-38502008 | MS.gene034570:CDS | 20.0% |
| !! | TGTACTCTATACAAAATTAT+TGG | + | chr1.3:38501563-38501582 | MS.gene034570:intron | 20.0% |
| !!! | GCTACATCATTTAATATTTT+TGG | + | chr1.3:38500163-38500182 | MS.gene034570:intron | 20.0% |
| ! | AAAAAATATATGGTCCTGTT+TGG | + | chr1.3:38499530-38499549 | MS.gene034570:intron | 25.0% |
| ! | AAAAATATATGGTCCTGTTT+GGG | + | chr1.3:38499531-38499550 | MS.gene034570:intron | 25.0% |
| ! | AACTGTTTCAAAGTAAATCA+AGG | - | chr1.3:38501662-38501681 | None:intergenic | 25.0% |
| ! | AATGGAAATCATTCAAAGAA+TGG | + | chr1.3:38499311-38499330 | MS.gene034570:CDS | 25.0% |
| ! | ACTCTATACAAAATTATTGG+AGG | + | chr1.3:38501566-38501585 | MS.gene034570:intron | 25.0% |
| ! | ACTGTTTCAAAGTAAATCAA+GGG | - | chr1.3:38501661-38501680 | None:intergenic | 25.0% |
| ! | AGAAAGAAGCAAAGAAATTT+AGG | + | chr1.3:38501820-38501839 | MS.gene034570:CDS | 25.0% |
| ! | ATAGTTCATTCACAAAATCA+AGG | + | chr1.3:38499270-38499289 | MS.gene034570:CDS | 25.0% |
| ! | TACAATTTGAACATAATGTG+TGG | - | chr1.3:38500959-38500978 | None:intergenic | 25.0% |
| ! | TAGTTCATTCACAAAATCAA+GGG | + | chr1.3:38499271-38499290 | MS.gene034570:CDS | 25.0% |
| ! | TCTATTTATCTTGAATGAGA+GGG | + | chr1.3:38499990-38500009 | MS.gene034570:intron | 25.0% |
| ! | TCTCAAAATCTGAAAATATC+AGG | - | chr1.3:38499220-38499239 | None:intergenic | 25.0% |
| ! | TCTTTGTATAATGTTTGAAG+TGG | + | chr1.3:38500345-38500364 | MS.gene034570:intron | 25.0% |
| ! | TGTATCAGCAAAATTGTTAT+AGG | + | chr1.3:38501405-38501424 | MS.gene034570:intron | 25.0% |
| ! | TTAAAGGTTGTAATCATGAT+AGG | + | chr1.3:38500093-38500112 | MS.gene034570:intron | 25.0% |
| ! | TTAAGTGCTTATCATATAAG+TGG | + | chr1.3:38499566-38499585 | MS.gene034570:intron | 25.0% |
| ! | TTCTATTTATCTTGAATGAG+AGG | + | chr1.3:38499989-38500008 | MS.gene034570:intron | 25.0% |
| !! | AATTTTGCTGATACAAATCT+AGG | - | chr1.3:38501400-38501419 | None:intergenic | 25.0% |
| !! | CTTTGTATAATGTTTGAAGT+GGG | + | chr1.3:38500346-38500365 | MS.gene034570:intron | 25.0% |
| !! | TGATTTTGTGAATGAACTAT+TGG | - | chr1.3:38499270-38499289 | None:intergenic | 25.0% |
| !! | TTTGTATAATGTTTGAAGTG+GGG | + | chr1.3:38500347-38500366 | MS.gene034570:intron | 25.0% |
| !!! | TTTTTTACAGATTCAACAGA+TGG | + | chr1.3:38501340-38501359 | MS.gene034570:intron | 25.0% |
| AAATCTGAAAATATCAGGTG+TGG | - | chr1.3:38499215-38499234 | None:intergenic | 30.0% | |
| AATTGAAGTCTAATACTCGT+TGG | - | chr1.3:38499929-38499948 | None:intergenic | 30.0% | |
| ACATCAAATTCTTGCAAACA+GGG | - | chr1.3:38499358-38499377 | None:intergenic | 30.0% | |
| AGTGTAACTAACAAATTCAG+CGG | + | chr1.3:38500033-38500052 | MS.gene034570:intron | 30.0% | |
| ATTTCCATGTTCATTCATGT+AGG | + | chr1.3:38499832-38499851 | MS.gene034570:intron | 30.0% | |
| GTTCATGACAAATTTCTCAA+AGG | - | chr1.3:38500125-38500144 | None:intergenic | 30.0% | |
| TACAGTTCAGCAATTCATTA+GGG | - | chr1.3:38499957-38499976 | None:intergenic | 30.0% | |
| TACATCAAATTCTTGCAAAC+AGG | - | chr1.3:38499359-38499378 | None:intergenic | 30.0% | |
| TCTAATCTACATATCTTTGC+AGG | + | chr1.3:38501698-38501717 | MS.gene034570:intron | 30.0% | |
| TGCTTATCATATAAGTGGTT+AGG | + | chr1.3:38499571-38499590 | MS.gene034570:intron | 30.0% | |
| TTACAGTTCAGCAATTCATT+AGG | - | chr1.3:38499958-38499977 | None:intergenic | 30.0% | |
| TTTAGGTATAGCTTAGAAGT+TGG | + | chr1.3:38501837-38501856 | MS.gene034570:CDS | 30.0% | |
| TTTCCATGTTCATTCATGTA+GGG | + | chr1.3:38499833-38499852 | MS.gene034570:intron | 30.0% | |
| TTTGACATAACGATGGTTAA+AGG | - | chr1.3:38501270-38501289 | None:intergenic | 30.0% | |
| ! | ACATTATGAGGCCAAAATTT+TGG | + | chr1.3:38500411-38500430 | MS.gene034570:intron | 30.0% |
| ! | ATGGCGTTTTTACGATTTTT+GGG | + | chr1.3:38501792-38501811 | MS.gene034570:CDS | 30.0% |
| ! | CATTATGAGGCCAAAATTTT+GGG | + | chr1.3:38500412-38500431 | MS.gene034570:intron | 30.0% |
| ! | GTCCTTTCAAATGTTTTCAT+GGG | + | chr1.3:38500592-38500611 | MS.gene034570:intron | 30.0% |
| ! | TTGCAGGTTTTCAATTGTTT+TGG | + | chr1.3:38501714-38501733 | MS.gene034570:intron | 30.0% |
| !! | AATTTTGGCCTCATAATGTT+TGG | - | chr1.3:38500410-38500429 | None:intergenic | 30.0% |
| !! | AGCATGTGTTTTTGTGTATT+TGG | + | chr1.3:38499460-38499479 | MS.gene034570:intron | 30.0% |
| !! | ATTTTGGCCTCATAATGTTT+GGG | - | chr1.3:38500409-38500428 | None:intergenic | 30.0% |
| !! | GATTTGATTTGACATAACGA+TGG | - | chr1.3:38501277-38501296 | None:intergenic | 30.0% |
| !! | GCTACTAAATTTCAAGTTGA+AGG | - | chr1.3:38499443-38499462 | None:intergenic | 30.0% |
| !! | TAAGCAATAAAAGTGCTATG+TGG | - | chr1.3:38499870-38499889 | None:intergenic | 30.0% |
| !! | TTTGCAGATTTGTTAACATC+AGG | + | chr1.3:38501478-38501497 | MS.gene034570:intron | 30.0% |
| !!! | AACCTAGCTCTTTATTTTTC+CGG | + | chr1.3:38501960-38501979 | MS.gene034570:CDS | 30.0% |
| AACATAATGTGTGGCCATTT+GGG | - | chr1.3:38500950-38500969 | None:intergenic | 35.0% | |
| AAGTACGAACCTGATGAATT+GGG | - | chr1.3:38499385-38499404 | None:intergenic | 35.0% | |
| ACCTTATATTCCCAAGATCA+CGG | - | chr1.3:38501016-38501035 | None:intergenic | 35.0% | |
| ACGCACATTTCATTTATTCC+CGG | - | chr1.3:38500295-38500314 | None:intergenic | 35.0% | |
| ATCAAGATGTTTACCCAAAC+AGG | - | chr1.3:38499547-38499566 | None:intergenic | 35.0% | |
| ATGAAGTTGAAAATGCCACA+TGG | + | chr1.3:38501300-38501319 | MS.gene034570:CDS | 35.0% | |
| CAAATAGCCGCAAACTTATA+TGG | + | chr1.3:38501862-38501881 | MS.gene034570:CDS | 35.0% | |
| GCCTATAAGCATACATAAAG+TGG | + | chr1.3:38499795-38499814 | MS.gene034570:intron | 35.0% | |
| TAACAAGCAGATGAGAAGTT+TGG | + | chr1.3:38500199-38500218 | MS.gene034570:intron | 35.0% | |
| TAGCAGTATACATCAAGAGA+AGG | - | chr1.3:38500147-38500166 | None:intergenic | 35.0% | |
| TGAAAACATTTGAAAGGACC+AGG | - | chr1.3:38500591-38500610 | None:intergenic | 35.0% | |
| TGGTTCAAGAACTTCTTTGA+AGG | - | chr1.3:38499195-38499214 | None:intergenic | 35.0% | |
| TTAGTTGATCACAGTTCATG+TGG | + | chr1.3:38500816-38500835 | MS.gene034570:intron | 35.0% | |
| TTATATGGCAAGGAATTCCA+AGG | + | chr1.3:38501877-38501896 | MS.gene034570:CDS | 35.0% | |
| TTCCTTGCCATATAAGTTTG+CGG | - | chr1.3:38501872-38501891 | None:intergenic | 35.0% | |
| TTTAATAGACATTGGTCCCA+AGG | - | chr1.3:38500066-38500085 | None:intergenic | 35.0% | |
| TTTATCTTGAATGAGAGGGA+TGG | + | chr1.3:38499994-38500013 | MS.gene034570:intron | 35.0% | |
| ! | AATCCTGATCGAATTTTCAG+CGG | + | chr1.3:38500677-38500696 | MS.gene034570:intron | 35.0% |
| ! | CATGGCGTTTTTACGATTTT+TGG | + | chr1.3:38501791-38501810 | MS.gene034570:CDS | 35.0% |
| ! | GAATATAAGGTGTTTGGCTT+TGG | + | chr1.3:38501025-38501044 | MS.gene034570:CDS | 35.0% |
| ! | GCCACTTTATGTATGCTTAT+AGG | - | chr1.3:38499799-38499818 | None:intergenic | 35.0% |
| ! | GGTCCTTTCAAATGTTTTCA+TGG | + | chr1.3:38500591-38500610 | MS.gene034570:intron | 35.0% |
| ! | TATTATTTCTCATGCGTCCT+AGG | - | chr1.3:38500554-38500573 | None:intergenic | 35.0% |
| ! | TCTTGGGAATATAAGGTGTT+TGG | + | chr1.3:38501019-38501038 | MS.gene034570:CDS | 35.0% |
| ! | TGAACTATTGGAATTAGCCT+CGG | - | chr1.3:38499258-38499277 | None:intergenic | 35.0% |
| ! | TTTCAAATGTTTTCATGGGC+CGG | + | chr1.3:38500596-38500615 | MS.gene034570:intron | 35.0% |
| ! | TTTTGGCCTCATAATGTTTG+GGG | - | chr1.3:38500408-38500427 | None:intergenic | 35.0% |
| !! | TAATTGTTGTTTATCGCCAC+CGG | - | chr1.3:38501982-38502001 | None:intergenic | 35.0% |
| AAAACACCAGGCCTAACATT+TGG | + | chr1.3:38500651-38500670 | MS.gene034570:intron | 40.0% | |
| AAGCTATCATCGAGAGCTTA+TGG | + | chr1.3:38499658-38499677 | MS.gene034570:intron | 40.0% | |
| AAGTCTAATACTCGTTGGCA+CGG | - | chr1.3:38499924-38499943 | None:intergenic | 40.0% | |
| AATAGTAATTACCTTGGGCC+TGG | + | chr1.3:38500570-38500589 | MS.gene034570:intron | 40.0% | |
| ACAGCAGACCAGAATATGAT+AGG | - | chr1.3:38500470-38500489 | None:intergenic | 40.0% | |
| ACCGTGATCTTGGGAATATA+AGG | + | chr1.3:38501012-38501031 | MS.gene034570:CDS | 40.0% | |
| ACTCGGCAATTAGAGCTATT+TGG | - | chr1.3:38500721-38500740 | None:intergenic | 40.0% | |
| ACTTACAGTTAGCATCCATG+TGG | - | chr1.3:38501318-38501337 | None:intergenic | 40.0% | |
| AGCTCTTATGAACCATCTCA+AGG | + | chr1.3:38501211-38501230 | MS.gene034570:CDS | 40.0% | |
| AGTACGAACCTGATGAATTG+GGG | - | chr1.3:38499384-38499403 | None:intergenic | 40.0% | |
| ATACGATCACCATCGTTTGT+AGG | - | chr1.3:38500326-38500345 | None:intergenic | 40.0% | |
| ATGCATATCCTGTGAACGAA+AGG | + | chr1.3:38500269-38500288 | MS.gene034570:intron | 40.0% | |
| CAAGTACGAACCTGATGAAT+TGG | - | chr1.3:38499386-38499405 | None:intergenic | 40.0% | |
| CAATTAAAGTTGAGGGTCAC+TGG | + | chr1.3:38501996-38502015 | MS.gene034570:CDS | 40.0% | |
| CACCGGAAAAATAAAGAGCT+AGG | - | chr1.3:38501965-38501984 | None:intergenic | 40.0% | |
| CAGCAGACCAGAATATGATA+GGG | - | chr1.3:38500469-38500488 | None:intergenic | 40.0% | |
| CCTAGATTCTGATATCTGCA+AGG | - | chr1.3:38501077-38501096 | None:intergenic | 40.0% | |
| CCTTGCAGATATCAGAATCT+AGG | + | chr1.3:38501074-38501093 | MS.gene034570:CDS | 40.0% | |
| CGTAAAAACGCCATGTAAAC+TGG | - | chr1.3:38501786-38501805 | None:intergenic | 40.0% | |
| CTCATTAGCAAGCTTCTGTT+TGG | - | chr1.3:38500521-38500540 | None:intergenic | 40.0% | |
| CTCGGCAATTAGAGCTATTT+GGG | - | chr1.3:38500720-38500739 | None:intergenic | 40.0% | |
| GAACATAATGTGTGGCCATT+TGG | - | chr1.3:38500951-38500970 | None:intergenic | 40.0% | |
| GCTTGTTTGGATGGAAAGAA+TGG | + | chr1.3:38499293-38499312 | MS.gene034570:CDS | 40.0% | |
| GGCCCATGAAAACATTTGAA+AGG | - | chr1.3:38500597-38500616 | None:intergenic | 40.0% | |
| TAATGAGTAGTCTCCAACCT+AGG | + | chr1.3:38500534-38500553 | MS.gene034570:intron | 40.0% | |
| TACACTGATCCTACAAACGA+TGG | + | chr1.3:38500314-38500333 | MS.gene034570:intron | 40.0% | |
| TAGTAAGACTTAGGCAAAGC+AGG | + | chr1.3:38500443-38500462 | MS.gene034570:intron | 40.0% | |
| TATCATATTCTGGTCTGCTG+TGG | + | chr1.3:38500469-38500488 | MS.gene034570:intron | 40.0% | |
| TATTTGTTCCAGTGCCCAAA+TGG | + | chr1.3:38500933-38500952 | MS.gene034570:intron | 40.0% | |
| TCACCCTACATGAATGAACA+TGG | - | chr1.3:38499839-38499858 | None:intergenic | 40.0% | |
| TCAGGATTGAGCCAAATGTT+AGG | - | chr1.3:38500665-38500684 | None:intergenic | 40.0% | |
| TCTGAATGATGAGTCCATCT+TGG | - | chr1.3:38501938-38501957 | None:intergenic | 40.0% | |
| TTGTGCAGACTTTGTAGTAG+AGG | - | chr1.3:38499895-38499914 | None:intergenic | 40.0% | |
| TTTCCGCTGAAAATTCGATC+AGG | - | chr1.3:38500683-38500702 | None:intergenic | 40.0% | |
| TTTGGCCTCATAATGTTTGG+GGG | - | chr1.3:38500407-38500426 | None:intergenic | 40.0% | |
| ! | AAATCAAGGGCTTGTTTGGA+TGG | + | chr1.3:38499284-38499303 | MS.gene034570:CDS | 40.0% |
| ! | CACAAAATCAAGGGCTTGTT+TGG | + | chr1.3:38499280-38499299 | MS.gene034570:CDS | 40.0% |
| ! | GCATTTTTGCTTGCACTTTG+AGG | + | chr1.3:38501740-38501759 | MS.gene034570:CDS | 40.0% |
| ! | GCTTTAGCTTAGAGTGGTAT+GGG | - | chr1.3:38501115-38501134 | None:intergenic | 40.0% |
| ! | GTGGCATTTTCAACTTCATG+TGG | - | chr1.3:38501299-38501318 | None:intergenic | 40.0% |
| ! | TATGACCAGGCCCAAAATTT+TGG | - | chr1.3:38500425-38500444 | None:intergenic | 40.0% |
| ! | TCGAATTTTCAGCGGAAACT+TGG | + | chr1.3:38500685-38500704 | MS.gene034570:intron | 40.0% |
| ! | TGCTTTAGCTTAGAGTGGTA+TGG | - | chr1.3:38501116-38501135 | None:intergenic | 40.0% |
| !! | AGGGATGGATTGAGAAATGT+AGG | + | chr1.3:38500009-38500028 | MS.gene034570:intron | 40.0% |
| !! | GGGATGGATTGAGAAATGTA+GGG | + | chr1.3:38500010-38500029 | MS.gene034570:intron | 40.0% |
| !!! | CTAGCTCTTTATTTTTCCGG+TGG | + | chr1.3:38501963-38501982 | MS.gene034570:CDS | 40.0% |
| AAAGTTCGTGACAGCCAAGA+TGG | + | chr1.3:38501921-38501940 | MS.gene034570:CDS | 45.0% | |
| AAGCAGGCCCTATCATATTC+TGG | + | chr1.3:38500459-38500478 | MS.gene034570:intron | 45.0% | |
| AATTCAGCGGCTTCAATCCT+TGG | + | chr1.3:38500046-38500065 | MS.gene034570:intron | 45.0% | |
| AGCCGCAAACTTATATGGCA+AGG | + | chr1.3:38501867-38501886 | MS.gene034570:CDS | 45.0% | |
| AGTCTAATACTCGTTGGCAC+GGG | - | chr1.3:38499923-38499942 | None:intergenic | 45.0% | |
| ATATCCTGTGAACGAAAGGC+CGG | + | chr1.3:38500273-38500292 | MS.gene034570:intron | 45.0% | |
| ATTCAGCGGCTTCAATCCTT+GGG | + | chr1.3:38500047-38500066 | MS.gene034570:intron | 45.0% | |
| ATTGAGCCAAATGTTAGGCC+TGG | - | chr1.3:38500660-38500679 | None:intergenic | 45.0% | |
| ATTTCTCATGCGTCCTAGGT+TGG | - | chr1.3:38500550-38500569 | None:intergenic | 45.0% | |
| CAACATGTCACCGTGATCTT+GGG | + | chr1.3:38501003-38501022 | MS.gene034570:CDS | 45.0% | |
| CAAGATCACGGTGACATGTT+GGG | - | chr1.3:38501004-38501023 | None:intergenic | 45.0% | |
| CCATCTCAAGGATGATCACA+AGG | + | chr1.3:38501223-38501242 | MS.gene034570:CDS | 45.0% | |
| CCTTGTGATCATCCTTGAGA+TGG | - | chr1.3:38501226-38501245 | None:intergenic | 45.0% | |
| GACAGCTAAGTCTAAATCCG+AGG | + | chr1.3:38499238-38499257 | MS.gene034570:CDS | 45.0% | |
| GATGTATCCCCCAATTCATC+AGG | + | chr1.3:38499373-38499392 | MS.gene034570:CDS | 45.0% | |
| GCAATTAGAGCTATTTGGGC+AGG | - | chr1.3:38500716-38500735 | None:intergenic | 45.0% | |
| GCCTAAGTCTTACTATGACC+AGG | - | chr1.3:38500438-38500457 | None:intergenic | 45.0% | |
| GCCTGGTCATAGTAAGACTT+AGG | + | chr1.3:38500434-38500453 | MS.gene034570:intron | 45.0% | |
| GTACGAACCTGATGAATTGG+GGG | - | chr1.3:38499383-38499402 | None:intergenic | 45.0% | |
| TAGAGCTATTTGGGCAGGTA+AGG | - | chr1.3:38500711-38500730 | None:intergenic | 45.0% | |
| ! | AAATGTTTTCATGGGCCGGA+TGG | + | chr1.3:38500600-38500619 | MS.gene034570:intron | 45.0% |
| ! | AATGTTTGAAGTGGGGCTCA+TGG | + | chr1.3:38500354-38500373 | MS.gene034570:intron | 45.0% |
| ! | ATGTTTGAAGTGGGGCTCAT+GGG | + | chr1.3:38500355-38500374 | MS.gene034570:intron | 45.0% |
| ! | CTCATGGGTTGTGCTTTAAC+TGG | + | chr1.3:38500370-38500389 | MS.gene034570:intron | 45.0% |
| ! | GCTCATGCTTTAGCTTAGAG+TGG | - | chr1.3:38501121-38501140 | None:intergenic | 45.0% |
| ! | TGTTAGGCCTGGTGTTTTTC+AGG | - | chr1.3:38500649-38500668 | None:intergenic | 45.0% |
| !! | CACTTTGAGGCGTTTCTACT+TGG | + | chr1.3:38501753-38501772 | MS.gene034570:CDS | 45.0% |
| !! | GTGTTTGGCTTTGGAGAAAG+TGG | + | chr1.3:38501034-38501053 | MS.gene034570:CDS | 45.0% |
| !! | TTTGGCTTTGGAGAAAGTGG+CGG | + | chr1.3:38501037-38501056 | MS.gene034570:CDS | 45.0% |
| !!! | GGTTTTCGTTGGCCTTTGTT+GGG | + | chr1.3:38500490-38500509 | MS.gene034570:intron | 45.0% |
| !!! | GTGTTTTTCAGGCTGGGATT+GGG | - | chr1.3:38500638-38500657 | None:intergenic | 45.0% |
| !!! | TGGTTTTCGTTGGCCTTTGT+TGG | + | chr1.3:38500489-38500508 | MS.gene034570:intron | 45.0% |
| !!! | TGTTTTTCAGGCTGGGATTG+GGG | - | chr1.3:38500637-38500656 | None:intergenic | 45.0% |
| !! | TTTAAACATAAAAAAATATA+TGG | + | chr1.3:38499520-38499539 | MS.gene034570:intron | 5.0% |
| !!! | TCTATTAAATTTATTTTTAA+AGG | + | chr1.3:38500077-38500096 | MS.gene034570:intron | 5.0% |
| AGCACTCTGATCCAGCATAG+GGG | - | chr1.3:38501172-38501191 | None:intergenic | 50.0% | |
| ATCCCAGCCTGAAAAACACC+AGG | + | chr1.3:38500639-38500658 | MS.gene034570:intron | 50.0% | |
| ATTTGAAAGGACCAGGCCCA+AGG | - | chr1.3:38500584-38500603 | None:intergenic | 50.0% | |
| CACAAGGTCGACGTACATGA+TGG | + | chr1.3:38501239-38501258 | MS.gene034570:CDS | 50.0% | |
| CCAACATGTCACCGTGATCT+TGG | + | chr1.3:38501002-38501021 | MS.gene034570:CDS | 50.0% | |
| CCAAGATCACGGTGACATGT+TGG | - | chr1.3:38501005-38501024 | None:intergenic | 50.0% | |
| CCCTGACGGTCACAAAAACT+CGG | - | chr1.3:38500738-38500757 | None:intergenic | 50.0% | |
| CCTCATAATGTTTGGGGGCT+GGG | - | chr1.3:38500402-38500421 | None:intergenic | 50.0% | |
| GAGCACTCTGATCCAGCATA+GGG | - | chr1.3:38501173-38501192 | None:intergenic | 50.0% | |
| GTCTAATACTCGTTGGCACG+GGG | - | chr1.3:38499922-38499941 | None:intergenic | 50.0% | |
| TATCCTGTGAACGAAAGGCC+GGG | + | chr1.3:38500274-38500293 | MS.gene034570:intron | 50.0% | |
| TGAGGGTCACTGGTCGTATA+TGG | + | chr1.3:38502006-38502025 | MS.gene034570:CDS | 50.0% | |
| TGGCACAGCTCCAGTTTACA+TGG | + | chr1.3:38501773-38501792 | MS.gene034570:CDS | 50.0% | |
| ! | AAGCACCTGTGTCGCTGTTT+CGG | - | chr1.3:38499737-38499756 | None:intergenic | 50.0% |
| ! | AGAGCACTCTGATCCAGCAT+AGG | - | chr1.3:38501174-38501193 | None:intergenic | 50.0% |
| ! | CCGAGTTTTTGTGACCGTCA+GGG | + | chr1.3:38500735-38500754 | MS.gene034570:intron | 50.0% |
| ! | GGAGAAAGTGGCGGAATCAA+TGG | + | chr1.3:38501046-38501065 | MS.gene034570:CDS | 50.0% |
| ! | TGAGGCCAAAATTTTGGGCC+TGG | + | chr1.3:38500417-38500436 | MS.gene034570:intron | 50.0% |
| ! | TGCAAACAGGGCACTCAAGT+AGG | - | chr1.3:38499346-38499365 | None:intergenic | 50.0% |
| ! | TGGTCTGCTGTGGTTTTCGT+TGG | + | chr1.3:38500479-38500498 | MS.gene034570:intron | 50.0% |
| !! | TTCGTTGGCCTTTGTTGGGT+GGG | + | chr1.3:38500494-38500513 | MS.gene034570:intron | 50.0% |
| !! | TTTCGTTGGCCTTTGTTGGG+TGG | + | chr1.3:38500493-38500512 | MS.gene034570:intron | 50.0% |
| !!! | GGTGTTTTTCAGGCTGGGAT+TGG | - | chr1.3:38500639-38500658 | None:intergenic | 50.0% |
| AAGGGAGCTCATGACCCTGA+CGG | - | chr1.3:38500752-38500771 | None:intergenic | 55.0% | |
| AATGTTTGGGGGCTGGGATC+AGG | - | chr1.3:38500396-38500415 | None:intergenic | 55.0% | |
| ATGTGTGGCCATTTGGGCAC+TGG | - | chr1.3:38500944-38500963 | None:intergenic | 55.0% | |
| ATTCCCGGCCTTTCGTTCAC+AGG | - | chr1.3:38500280-38500299 | None:intergenic | 55.0% | |
| CACGGTGACATGTTGGGCAA+CGG | - | chr1.3:38500998-38501017 | None:intergenic | 55.0% | |
| CCAGCATAGGGGCAACTGTA+TGG | - | chr1.3:38501161-38501180 | None:intergenic | 55.0% | |
| CCATACAGTTGCCCCTATGC+TGG | + | chr1.3:38501158-38501177 | MS.gene034570:CDS | 55.0% | |
| CCCAGCCCCCAAACATTATG+AGG | + | chr1.3:38500399-38500418 | MS.gene034570:intron | 55.0% | |
| GCCTCATAATGTTTGGGGGC+TGG | - | chr1.3:38500403-38500422 | None:intergenic | 55.0% | |
| TGACTCTCGCGAATGCTCCT+TGG | - | chr1.3:38501897-38501916 | None:intergenic | 55.0% | |
| TGTTTGGCCCCACCCAACAA+AGG | - | chr1.3:38500505-38500524 | None:intergenic | 55.0% | |
| ! | GCCGAGTTTTTGTGACCGTC+AGG | + | chr1.3:38500734-38500753 | MS.gene034570:intron | 55.0% |
| !! | TCGTTGGCCTTTGTTGGGTG+GGG | + | chr1.3:38500495-38500514 | MS.gene034570:intron | 55.0% |
| !!! | AGGCCTGGTGTTTTTCAGGC+TGG | - | chr1.3:38500645-38500664 | None:intergenic | 55.0% |
| !!! | GGCCTGGTGTTTTTCAGGCT+GGG | - | chr1.3:38500644-38500663 | None:intergenic | 55.0% |
| GCTCTCCGAAACAGCGACAC+AGG | + | chr1.3:38499729-38499748 | MS.gene034570:intron | 60.0% | |
| TGGGCCGGATGGTCTCATTG+CGG | + | chr1.3:38500611-38500630 | MS.gene034570:intron | 60.0% | |
| GGGGCCGCAATGAGACCATC+CGG | - | chr1.3:38500618-38500637 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 38499173 | 38502040 | 38499173 | ID=MS.gene034570 |
| chr1.3 | mRNA | 38499173 | 38502040 | 38499173 | ID=MS.gene034570.t1;Parent=MS.gene034570 |
| chr1.3 | exon | 38499173 | 38499394 | 38499173 | ID=MS.gene034570.t1.exon1;Parent=MS.gene034570.t1 |
| chr1.3 | CDS | 38499173 | 38499394 | 38499173 | ID=cds.MS.gene034570.t1;Parent=MS.gene034570.t1 |
| chr1.3 | exon | 38500945 | 38501331 | 38500945 | ID=MS.gene034570.t1.exon2;Parent=MS.gene034570.t1 |
| chr1.3 | CDS | 38500945 | 38501331 | 38500945 | ID=cds.MS.gene034570.t1;Parent=MS.gene034570.t1 |
| chr1.3 | exon | 38501720 | 38502040 | 38501720 | ID=MS.gene034570.t1.exon3;Parent=MS.gene034570.t1 |
| chr1.3 | CDS | 38501720 | 38502040 | 38501720 | ID=cds.MS.gene034570.t1;Parent=MS.gene034570.t1 |
| Gene Sequence |
| Protein sequence |
