Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98989.t1 | XP_013467697.1 | 99.7 | 309 | 1 | 0 | 1 | 309 | 1 | 309 | 6.10E-186 | 659.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98989.t1 | Q9M2P4 | 78.4 | 306 | 65 | 1 | 4 | 309 | 4 | 308 | 1.3e-144 | 513.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98989.t1 | A0A072VI80 | 99.7 | 309 | 1 | 0 | 1 | 309 | 1 | 309 | 4.4e-186 | 659.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98989 | MS.gene39144 | PPI |
| MS.gene98989 | MS.gene055308 | PPI |
| MS.gene98989 | MS.gene91723 | PPI |
| MS.gene98989 | MS.gene034570 | PPI |
| MS.gene98989 | MS.gene04647 | PPI |
| MS.gene98989 | MS.gene89107 | PPI |
| MS.gene98989 | MS.gene055974 | PPI |
| MS.gene98989 | MS.gene64538 | PPI |
| MS.gene50517 | MS.gene98989 | PPI |
| MS.gene98989 | MS.gene90302 | PPI |
| MS.gene98989 | MS.gene52683 | PPI |
| MS.gene36292 | MS.gene98989 | PPI |
| MS.gene98989 | MS.gene61205 | PPI |
| MS.gene96493 | MS.gene98989 | PPI |
| MS.gene018013 | MS.gene98989 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98989.t1 | MTR_1g054335 | 99.676 | 309 | 1 | 0 | 1 | 309 | 1 | 309 | 0.0 | 647 |
| MS.gene98989.t1 | MTR_7g093600 | 80.323 | 310 | 60 | 1 | 1 | 309 | 1 | 310 | 0.0 | 530 |
| MS.gene98989.t1 | MTR_1g008120 | 70.447 | 291 | 79 | 1 | 19 | 309 | 36 | 319 | 1.53e-155 | 438 |
| MS.gene98989.t1 | MTR_3g091510 | 74.717 | 265 | 67 | 0 | 45 | 309 | 47 | 311 | 2.93e-154 | 434 |
| MS.gene98989.t1 | MTR_3g017590 | 74.525 | 263 | 66 | 1 | 47 | 309 | 43 | 304 | 3.25e-152 | 429 |
| MS.gene98989.t1 | MTR_8g027520 | 70.803 | 274 | 80 | 0 | 36 | 309 | 31 | 304 | 5.82e-152 | 428 |
| MS.gene98989.t1 | MTR_8g027520 | 70.803 | 274 | 80 | 0 | 36 | 309 | 22 | 295 | 7.48e-152 | 428 |
| MS.gene98989.t1 | MTR_7g117415 | 71.863 | 263 | 74 | 0 | 47 | 309 | 50 | 312 | 1.02e-146 | 415 |
| MS.gene98989.t1 | MTR_8g038370 | 71.206 | 257 | 74 | 0 | 53 | 309 | 107 | 363 | 1.20e-145 | 414 |
| MS.gene98989.t1 | MTR_5g076660 | 26.957 | 230 | 152 | 5 | 43 | 266 | 12 | 231 | 1.48e-22 | 96.3 |
| MS.gene98989.t1 | MTR_7g024290 | 26.667 | 210 | 144 | 4 | 58 | 267 | 11 | 210 | 9.27e-20 | 88.2 |
| MS.gene98989.t1 | MTR_4g094468 | 36.090 | 133 | 78 | 3 | 57 | 189 | 96 | 221 | 9.57e-20 | 88.2 |
| MS.gene98989.t1 | MTR_5g067400 | 26.122 | 245 | 162 | 5 | 57 | 301 | 10 | 235 | 2.32e-19 | 87.0 |
| MS.gene98989.t1 | MTR_2g038430 | 31.783 | 129 | 83 | 2 | 58 | 183 | 25 | 151 | 7.79e-19 | 85.9 |
| MS.gene98989.t1 | MTR_5g076540 | 29.386 | 228 | 141 | 6 | 58 | 280 | 11 | 223 | 2.28e-18 | 83.2 |
| MS.gene98989.t1 | MTR_5g061290 | 25.909 | 220 | 150 | 7 | 58 | 276 | 18 | 225 | 3.06e-18 | 84.0 |
| MS.gene98989.t1 | MTR_7g094390 | 29.940 | 167 | 111 | 3 | 58 | 224 | 172 | 332 | 3.00e-17 | 82.4 |
| MS.gene98989.t1 | MTR_5g076370 | 25.957 | 235 | 160 | 7 | 71 | 305 | 47 | 267 | 7.18e-17 | 80.1 |
| MS.gene98989.t1 | MTR_2g038420 | 25.000 | 212 | 147 | 6 | 58 | 267 | 25 | 226 | 2.06e-16 | 79.0 |
| MS.gene98989.t1 | MTR_5g076520 | 31.579 | 171 | 111 | 3 | 54 | 224 | 7 | 171 | 1.16e-15 | 76.6 |
| MS.gene98989.t1 | MTR_1g046650 | 24.419 | 258 | 171 | 6 | 57 | 301 | 10 | 256 | 9.60e-15 | 73.9 |
| MS.gene98989.t1 | MTR_1g046650 | 24.419 | 258 | 171 | 6 | 57 | 301 | 41 | 287 | 1.11e-14 | 73.9 |
| MS.gene98989.t1 | MTR_5g076720 | 26.122 | 245 | 164 | 6 | 58 | 302 | 82 | 309 | 1.16e-14 | 74.3 |
| MS.gene98989.t1 | MTR_5g076820 | 25.100 | 251 | 154 | 8 | 58 | 301 | 19 | 242 | 1.28e-14 | 73.2 |
| MS.gene98989.t1 | MTR_1g046640 | 25.000 | 248 | 168 | 7 | 58 | 305 | 11 | 240 | 8.69e-14 | 71.2 |
| MS.gene98989.t1 | MTR_5g076505 | 29.060 | 117 | 80 | 2 | 74 | 190 | 23 | 136 | 2.59e-11 | 63.9 |
| MS.gene98989.t1 | MTR_1g046650 | 23.333 | 240 | 160 | 6 | 75 | 301 | 28 | 256 | 6.87e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98989.t1 | AT3G58040 | 77.994 | 309 | 67 | 1 | 1 | 309 | 1 | 308 | 0.0 | 507 |
| MS.gene98989.t1 | AT3G58040 | 77.994 | 309 | 67 | 1 | 1 | 309 | 1 | 308 | 0.0 | 507 |
| MS.gene98989.t1 | AT2G41980 | 77.670 | 309 | 65 | 2 | 1 | 309 | 1 | 305 | 3.77e-179 | 497 |
| MS.gene98989.t1 | AT4G27880 | 72.119 | 269 | 75 | 0 | 41 | 309 | 44 | 312 | 4.21e-152 | 429 |
| MS.gene98989.t1 | AT3G61790 | 75.290 | 259 | 64 | 0 | 51 | 309 | 53 | 311 | 6.43e-152 | 429 |
| MS.gene98989.t1 | AT5G53360 | 75.490 | 204 | 50 | 0 | 106 | 309 | 15 | 218 | 5.17e-118 | 339 |
| MS.gene98989.t1 | AT5G53360 | 75.490 | 204 | 50 | 0 | 106 | 309 | 15 | 218 | 5.17e-118 | 339 |
| MS.gene98989.t1 | AT3G58040 | 69.683 | 221 | 65 | 2 | 1 | 221 | 1 | 219 | 1.20e-108 | 315 |
| MS.gene98989.t1 | AT3G13672 | 54.857 | 175 | 76 | 1 | 138 | 309 | 38 | 212 | 2.06e-70 | 218 |
| MS.gene98989.t1 | AT3G13672 | 48.020 | 202 | 75 | 2 | 138 | 309 | 38 | 239 | 7.45e-65 | 204 |
| MS.gene98989.t1 | AT5G53360 | 74.528 | 106 | 27 | 0 | 204 | 309 | 60 | 165 | 2.02e-56 | 181 |
| MS.gene98989.t1 | AT5G37870 | 39.062 | 128 | 75 | 2 | 57 | 184 | 41 | 165 | 8.76e-25 | 101 |
| MS.gene98989.t1 | AT5G37930 | 38.806 | 134 | 79 | 2 | 57 | 190 | 109 | 239 | 3.67e-23 | 98.2 |
| MS.gene98989.t1 | AT5G37890 | 26.721 | 247 | 166 | 6 | 57 | 301 | 47 | 280 | 6.34e-21 | 90.9 |
| MS.gene98989.t1 | AT1G66620 | 41.489 | 94 | 55 | 0 | 57 | 150 | 40 | 133 | 3.09e-19 | 86.7 |
| MS.gene98989.t1 | AT5G62800 | 27.059 | 255 | 158 | 7 | 57 | 301 | 39 | 275 | 4.72e-19 | 86.7 |
| MS.gene98989.t1 | AT5G62800 | 28.037 | 214 | 130 | 5 | 57 | 260 | 39 | 238 | 9.71e-19 | 85.5 |
| MS.gene98989.t1 | AT5G37910 | 36.364 | 121 | 75 | 1 | 57 | 177 | 34 | 152 | 1.71e-18 | 84.0 |
| MS.gene98989.t1 | AT1G66650 | 35.556 | 135 | 82 | 3 | 57 | 188 | 82 | 214 | 6.36e-18 | 83.2 |
| MS.gene98989.t1 | AT1G66660 | 37.500 | 112 | 68 | 1 | 57 | 168 | 102 | 211 | 2.65e-17 | 81.6 |
| MS.gene98989.t1 | AT1G66630 | 36.885 | 122 | 73 | 2 | 57 | 176 | 45 | 164 | 1.41e-16 | 79.0 |
| MS.gene98989.t1 | AT1G66610 | 35.000 | 100 | 56 | 1 | 43 | 133 | 134 | 233 | 1.27e-13 | 69.7 |
| MS.gene98989.t1 | AT1G66610 | 44.444 | 63 | 35 | 0 | 57 | 119 | 52 | 114 | 7.33e-11 | 61.6 |
| MS.gene98989.t1 | AT1G66610 | 44.444 | 63 | 35 | 0 | 57 | 119 | 52 | 114 | 2.53e-11 | 64.3 |
Find 69 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGACATAACGATGGTTAA+AGG | 0.268093 | 1.2:-41542678 | None:intergenic |
| AGAAAGAAGCAAAGAAATTT+AGG | 0.283423 | 1.2:+41543231 | MS.gene98989:CDS |
| CACAAAATCAAGGACTTGTT+TGG | 0.286191 | 1.2:+41540691 | MS.gene98989:CDS |
| CAAATAGCCGCAAACTTATA+TGG | 0.307974 | 1.2:+41543273 | MS.gene98989:CDS |
| CAAGTACGAACCTGATGAAT+TGG | 0.312951 | 1.2:-41540794 | None:intergenic |
| ATGTTCAAATTGTAAGATTA+CGG | 0.337638 | 1.2:+41542376 | MS.gene98989:CDS |
| CACTTTGAGGCGTTTCTACT+TGG | 0.338233 | 1.2:+41543164 | MS.gene98989:CDS |
| CCAACATGTCACCGTGATCT+TGG | 0.342485 | 1.2:+41542413 | MS.gene98989:CDS |
| TACATCAAATTCTTGCAAAC+AGG | 0.347642 | 1.2:-41540767 | None:intergenic |
| TGAGGGTCACTGGTCGTATA+TGG | 0.351201 | 1.2:+41543417 | MS.gene98989:CDS |
| GAATATAAGGTGTTTGGCTT+TGG | 0.353568 | 1.2:+41542436 | MS.gene98989:CDS |
| TCTCAAAATCTGAAAATATC+AGG | 0.364559 | 1.2:-41540628 | None:intergenic |
| GAACATAATGTGTGGCCATT+TGG | 0.366483 | 1.2:-41542359 | None:intergenic |
| CCTTGCAGATATCAGAATCT+AGG | 0.378860 | 1.2:+41542485 | MS.gene98989:CDS |
| TTGGATATTTCAATGGATCT+AGG | 0.383601 | 1.2:+41540572 | None:intergenic |
| AACATAATGTGTGGCCATTT+GGG | 0.389709 | 1.2:-41542358 | None:intergenic |
| TGCTTTAGCTTAGAGTGGTA+TGG | 0.391166 | 1.2:-41542524 | None:intergenic |
| TCTTGGGAATATAAGGTGTT+TGG | 0.396349 | 1.2:+41542430 | MS.gene98989:CDS |
| AAGTACGAACCTGATGAATT+GGG | 0.406932 | 1.2:-41540793 | None:intergenic |
| CAACATGTCACCGTGATCTT+GGG | 0.423076 | 1.2:+41542414 | MS.gene98989:CDS |
| ACTTGTTTGGATGGAAAGAA+TGG | 0.430358 | 1.2:+41540704 | MS.gene98989:CDS |
| CAAGATCACGGTGACATGTT+GGG | 0.450043 | 1.2:-41542412 | None:intergenic |
| ACCGTGATCTTGGGAATATA+AGG | 0.454771 | 1.2:+41542423 | MS.gene98989:CDS |
| CCAGCATAGGGGCAACTGTA+TGG | 0.454990 | 1.2:-41542569 | None:intergenic |
| GGAGAAAGTGGCGGAATCAA+TGG | 0.455505 | 1.2:+41542457 | MS.gene98989:CDS |
| CCATACAGTTGCCCCTATGC+TGG | 0.466797 | 1.2:+41542569 | MS.gene98989:CDS |
| TATTTGTTCCAGTGCCCAAA+TGG | 0.471812 | 1.2:+41542344 | MS.gene98989:intron |
| TTCCTTGCCATATAAGTTTG+CGG | 0.472513 | 1.2:-41543280 | None:intergenic |
| TCTGAATGATGAGTCCATCT+TGG | 0.475128 | 1.2:-41543346 | None:intergenic |
| TGGCACAGCTCCAGTTTACA+TGG | 0.477030 | 1.2:+41543184 | MS.gene98989:CDS |
| TGGTTCAAGAACTTCTTTGA+AGG | 0.477924 | 1.2:-41540603 | None:intergenic |
| TGACTCTCGCGAATGCTCCT+TGG | 0.482817 | 1.2:-41543305 | None:intergenic |
| CAATTAAAGTTGAGGGTCAC+TGG | 0.483429 | 1.2:+41543407 | MS.gene98989:CDS |
| GTGTTTGGCTTTGGAGAAAG+TGG | 0.490790 | 1.2:+41542445 | MS.gene98989:CDS |
| TTTAGGTATAGCTTAGAAGT+TGG | 0.491687 | 1.2:+41543248 | MS.gene98989:CDS |
| GCTTTAGCTTAGAGTGGTAT+GGG | 0.501913 | 1.2:-41542523 | None:intergenic |
| TAATTGTTGTTTATCGCCAC+CGG | 0.503340 | 1.2:-41543390 | None:intergenic |
| TAAACAACAATTAAAGTTGA+GGG | 0.518775 | 1.2:+41543400 | MS.gene98989:CDS |
| GAGCACTCTGATCCAGCATA+GGG | 0.522726 | 1.2:-41542581 | None:intergenic |
| GCTCATGCTTTAGCTTAGAG+TGG | 0.522927 | 1.2:-41542529 | None:intergenic |
| CCAAGATCACGGTGACATGT+TGG | 0.534401 | 1.2:-41542413 | None:intergenic |
| CCTTGTGATCATCCTTGAGA+TGG | 0.535656 | 1.2:-41542634 | None:intergenic |
| ATAGTTCATTCACAAAATCA+AGG | 0.536336 | 1.2:+41540681 | MS.gene98989:CDS |
| TGAACTATTGGAATTAGCCT+CGG | 0.540112 | 1.2:-41540666 | None:intergenic |
| AAATCAAGGACTTGTTTGGA+TGG | 0.545636 | 1.2:+41540695 | MS.gene98989:CDS |
| AAAGTTCGTGACAGCCAAGA+TGG | 0.548328 | 1.2:+41543332 | MS.gene98989:CDS |
| CACAAGGTCGACGTACATGA+TGG | 0.550537 | 1.2:+41542650 | MS.gene98989:CDS |
| AGCCGCAAACTTATATGGCA+AGG | 0.559593 | 1.2:+41543278 | MS.gene98989:CDS |
| ATAAACAACAATTAAAGTTG+AGG | 0.561013 | 1.2:+41543399 | MS.gene98989:CDS |
| CACGGTGACATGTTGGGCAA+CGG | 0.570767 | 1.2:-41542406 | None:intergenic |
| TGCAAACAGGGCACTCAAGT+AGG | 0.572689 | 1.2:-41540754 | None:intergenic |
| AGAGCACTCTGATCCAGCAT+AGG | 0.575084 | 1.2:-41542582 | None:intergenic |
| TACAATTTGAACATAATGTG+TGG | 0.595926 | 1.2:-41542367 | None:intergenic |
| AAATCTGAAAATATCAGGTG+TGG | 0.607252 | 1.2:-41540623 | None:intergenic |
| CCATCTCAAGGATGATCACA+AGG | 0.608998 | 1.2:+41542634 | MS.gene98989:CDS |
| ACATCAAATTCTTGCAAACA+GGG | 0.610530 | 1.2:-41540766 | None:intergenic |
| TTATATGGCAAGGAATTCCA+AGG | 0.613859 | 1.2:+41543288 | MS.gene98989:CDS |
| ACCTTATATTCCCAAGATCA+CGG | 0.615283 | 1.2:-41542424 | None:intergenic |
| AGTACGAACCTGATGAATTG+GGG | 0.619005 | 1.2:-41540792 | None:intergenic |
| CCTAGATTCTGATATCTGCA+AGG | 0.629196 | 1.2:-41542485 | None:intergenic |
| AGCTCTTATGAACCATCTCA+AGG | 0.629365 | 1.2:+41542622 | MS.gene98989:CDS |
| GATATTTCAATGGATCTAGG+AGG | 0.648620 | 1.2:+41540575 | None:intergenic |
| TTTGGCTTTGGAGAAAGTGG+CGG | 0.652459 | 1.2:+41542448 | MS.gene98989:CDS |
| GACAGCTAAGTCTAAATCCG+AGG | 0.663173 | 1.2:+41540649 | MS.gene98989:CDS |
| GTACGAACCTGATGAATTGG+GGG | 0.683219 | 1.2:-41540791 | None:intergenic |
| GATTTGATTTGACATAACGA+TGG | 0.690993 | 1.2:-41542685 | None:intergenic |
| ATGAAGTTGAAAATGCCACA+TGG | 0.708825 | 1.2:+41542711 | MS.gene98989:CDS |
| AGCACTCTGATCCAGCATAG+GGG | 0.715799 | 1.2:-41542580 | None:intergenic |
| ACTTACAGTTAGCATCCATG+TGG | 0.763259 | 1.2:-41542726 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATTTAATAGACAT+TGG | - | chr1.2:41541485-41541504 | None:intergenic | 10.0% |
| !! | ATCTATTAAAATAAGTATTA+GGG | - | chr1.2:41542273-41542292 | None:intergenic | 10.0% |
| !!! | ATTTTTTTATGTTTAAATCA+TGG | - | chr1.2:41540928-41540947 | None:intergenic | 10.0% |
| !! | AAAAAATTAGCTAACATTTA+AGG | - | chr1.2:41542182-41542201 | None:intergenic | 15.0% |
| !! | AAAAATTAGCTAACATTTAA+GGG | - | chr1.2:41542181-41542200 | None:intergenic | 15.0% |
| !! | CATCTATTAAAATAAGTATT+AGG | - | chr1.2:41542274-41542293 | None:intergenic | 15.0% |
| !! | AACAAATAATTCAGTTATCA+AGG | - | chr1.2:41542332-41542351 | None:intergenic | 20.0% |
| !! | AATGGAAATCATTCAAAAAA+TGG | + | chr1.2:41540722-41540741 | MS.gene98989:CDS | 20.0% |
| !! | ACTTATTTGAACTTATCTAT+TGG | - | chr1.2:41541174-41541193 | None:intergenic | 20.0% |
| !! | AGAAATAATAGTAATTACCT+TGG | + | chr1.2:41541975-41541994 | MS.gene98989:intron | 20.0% |
| !! | ATAAACAACAATTAAAGTTG+AGG | + | chr1.2:41543399-41543418 | MS.gene98989:CDS | 20.0% |
| !! | ATGTTCAAATTGTAAGATTA+CGG | + | chr1.2:41542376-41542395 | MS.gene98989:CDS | 20.0% |
| !! | GAAATAATAGTAATTACCTT+GGG | + | chr1.2:41541976-41541995 | MS.gene98989:intron | 20.0% |
| !! | TAAACAACAATTAAAGTTGA+GGG | + | chr1.2:41543400-41543419 | MS.gene98989:CDS | 20.0% |
| !! | TGTACTCTATACAAAATTAT+TGG | + | chr1.2:41542974-41542993 | MS.gene98989:intron | 20.0% |
| !!! | GCTACATCAATTAATATTTT+TGG | + | chr1.2:41541574-41541593 | MS.gene98989:intron | 20.0% |
| ! | AAAAAATATATGGTCCTGTT+TGG | + | chr1.2:41540941-41540960 | MS.gene98989:intron | 25.0% |
| ! | AAAAATATATGGTCCTGTTT+GGG | + | chr1.2:41540942-41540961 | MS.gene98989:intron | 25.0% |
| ! | AACTGTTTCAAAGTAAATCA+AGG | - | chr1.2:41543073-41543092 | None:intergenic | 25.0% |
| ! | ACTCTATACAAAATTATTGG+AGG | + | chr1.2:41542977-41542996 | MS.gene98989:intron | 25.0% |
| ! | ACTGTTTCAAAGTAAATCAA+GGG | - | chr1.2:41543072-41543091 | None:intergenic | 25.0% |
| ! | AGAAAGAAGCAAAGAAATTT+AGG | + | chr1.2:41543231-41543250 | MS.gene98989:CDS | 25.0% |
| ! | ATAGTTCATTCACAAAATCA+AGG | + | chr1.2:41540681-41540700 | MS.gene98989:CDS | 25.0% |
| ! | TACAATTTGAACATAATGTG+TGG | - | chr1.2:41542370-41542389 | None:intergenic | 25.0% |
| ! | TCTATTTATCTTGAATGAGA+GGG | + | chr1.2:41541401-41541420 | MS.gene98989:intron | 25.0% |
| ! | TCTCAAAATCTGAAAATATC+AGG | - | chr1.2:41540631-41540650 | None:intergenic | 25.0% |
| ! | TCTTTGTATAATGTTTGAAG+TGG | + | chr1.2:41541756-41541775 | MS.gene98989:intron | 25.0% |
| ! | TGTATCAGCAAAATTGTTAT+AGG | + | chr1.2:41542816-41542835 | MS.gene98989:intron | 25.0% |
| ! | TTAAAGGTTGTAATCATGAT+AGG | + | chr1.2:41541504-41541523 | MS.gene98989:intron | 25.0% |
| ! | TTAAGTGCTTATCATATAAG+TGG | + | chr1.2:41540977-41540996 | MS.gene98989:intron | 25.0% |
| ! | TTCTATTTATCTTGAATGAG+AGG | + | chr1.2:41541400-41541419 | MS.gene98989:intron | 25.0% |
| !! | AATTTTGCTGATACAAATCT+AGG | - | chr1.2:41542811-41542830 | None:intergenic | 25.0% |
| !! | CTTTGTATAATGTTTGAAGT+GGG | + | chr1.2:41541757-41541776 | MS.gene98989:intron | 25.0% |
| !! | TGATTTTGTGAATGAACTAT+TGG | - | chr1.2:41540681-41540700 | None:intergenic | 25.0% |
| !! | TTTGTATAATGTTTGAAGTG+GGG | + | chr1.2:41541758-41541777 | MS.gene98989:intron | 25.0% |
| !!! | TTTACAGATTTGTTAACATC+AGG | + | chr1.2:41542889-41542908 | MS.gene98989:intron | 25.0% |
| !!! | TTTTTTACAGATTCAACAGA+TGG | + | chr1.2:41542751-41542770 | MS.gene98989:intron | 25.0% |
| AAATCTGAAAATATCAGGTG+TGG | - | chr1.2:41540626-41540645 | None:intergenic | 30.0% | |
| AATTGAAGTCTAATACTCGT+TGG | - | chr1.2:41541340-41541359 | None:intergenic | 30.0% | |
| ACATCAAATTCTTGCAAACA+GGG | - | chr1.2:41540769-41540788 | None:intergenic | 30.0% | |
| AGTGTAACTAACAAATTCAG+CGG | + | chr1.2:41541444-41541463 | MS.gene98989:intron | 30.0% | |
| ATTTCCATGTTCATTCATGT+AGG | + | chr1.2:41541243-41541262 | MS.gene98989:intron | 30.0% | |
| GTTCATGACAAATTTCTCAA+AGG | - | chr1.2:41541536-41541555 | None:intergenic | 30.0% | |
| TACAGTTCAGCAATTCATTA+GGG | - | chr1.2:41541368-41541387 | None:intergenic | 30.0% | |
| TACATCAAATTCTTGCAAAC+AGG | - | chr1.2:41540770-41540789 | None:intergenic | 30.0% | |
| TCTAATCTACATATCTTTGC+AGG | + | chr1.2:41543109-41543128 | MS.gene98989:intron | 30.0% | |
| TGCTTATCATATAAGTGGTT+AGG | + | chr1.2:41540982-41541001 | MS.gene98989:intron | 30.0% | |
| TTACAGTTCAGCAATTCATT+AGG | - | chr1.2:41541369-41541388 | None:intergenic | 30.0% | |
| TTTAGGTATAGCTTAGAAGT+TGG | + | chr1.2:41543248-41543267 | MS.gene98989:CDS | 30.0% | |
| TTTCCATGTTCATTCATGTA+GGG | + | chr1.2:41541244-41541263 | MS.gene98989:intron | 30.0% | |
| TTTGACATAACGATGGTTAA+AGG | - | chr1.2:41542681-41542700 | None:intergenic | 30.0% | |
| ! | ACATTATGAGGCCAAAATTT+TGG | + | chr1.2:41541822-41541841 | MS.gene98989:intron | 30.0% |
| ! | ATGGCGTTTTTACGATTTTT+GGG | + | chr1.2:41543203-41543222 | MS.gene98989:CDS | 30.0% |
| ! | CATTATGAGGCCAAAATTTT+GGG | + | chr1.2:41541823-41541842 | MS.gene98989:intron | 30.0% |
| ! | GTCCTTTCAAATGTTTTCAT+GGG | + | chr1.2:41542003-41542022 | MS.gene98989:intron | 30.0% |
| ! | TATTATTTCTCATGCTTCCT+AGG | - | chr1.2:41541965-41541984 | None:intergenic | 30.0% |
| ! | TTGCAGGTTTTCAATTGTTT+TGG | + | chr1.2:41543125-41543144 | MS.gene98989:intron | 30.0% |
| !! | AATTTTGGCCTCATAATGTT+TGG | - | chr1.2:41541821-41541840 | None:intergenic | 30.0% |
| !! | AGCATGTGTTTTTGTGTATT+TGG | + | chr1.2:41540871-41540890 | MS.gene98989:intron | 30.0% |
| !! | ATTTTGGCCTCATAATGTTT+GGG | - | chr1.2:41541820-41541839 | None:intergenic | 30.0% |
| !! | GATTTGATTTGACATAACGA+TGG | - | chr1.2:41542688-41542707 | None:intergenic | 30.0% |
| !! | GCTACTAAATTTCAAGTTGA+AGG | - | chr1.2:41540854-41540873 | None:intergenic | 30.0% |
| !! | TAAGCAATAAAAGTGCTATG+TGG | - | chr1.2:41541281-41541300 | None:intergenic | 30.0% |
| !!! | AACCTAGCTCTTTATTTTTC+CGG | + | chr1.2:41543371-41543390 | MS.gene98989:CDS | 30.0% |
| AACATAATGTGTGGCCATTT+GGG | - | chr1.2:41542361-41542380 | None:intergenic | 35.0% | |
| AAGTACGAACCTGATGAATT+GGG | - | chr1.2:41540796-41540815 | None:intergenic | 35.0% | |
| ACCTTATATTCCCAAGATCA+CGG | - | chr1.2:41542427-41542446 | None:intergenic | 35.0% | |
| ACGCACATTTCATTTATTCC+CGG | - | chr1.2:41541706-41541725 | None:intergenic | 35.0% | |
| ACTTGTTTGGATGGAAAGAA+TGG | + | chr1.2:41540704-41540723 | MS.gene98989:CDS | 35.0% | |
| ATCAAGATGTTTACCCAAAC+AGG | - | chr1.2:41540958-41540977 | None:intergenic | 35.0% | |
| ATGAAGTTGAAAATGCCACA+TGG | + | chr1.2:41542711-41542730 | MS.gene98989:CDS | 35.0% | |
| CAAATAGCCGCAAACTTATA+TGG | + | chr1.2:41543273-41543292 | MS.gene98989:CDS | 35.0% | |
| GCCTATAAGCATACATAAAG+TGG | + | chr1.2:41541206-41541225 | MS.gene98989:intron | 35.0% | |
| TAACAAGCAGATGAGAAGTT+TGG | + | chr1.2:41541610-41541629 | MS.gene98989:intron | 35.0% | |
| TAGCAGTATACATCAAGAGA+AGG | - | chr1.2:41541558-41541577 | None:intergenic | 35.0% | |
| TGAAAACATTTGAAAGGACC+AGG | - | chr1.2:41542002-41542021 | None:intergenic | 35.0% | |
| TGGTTCAAGAACTTCTTTGA+AGG | - | chr1.2:41540606-41540625 | None:intergenic | 35.0% | |
| TTAGTTGATCACAGTTCATG+TGG | + | chr1.2:41542227-41542246 | MS.gene98989:intron | 35.0% | |
| TTATATGGCAAGGAATTCCA+AGG | + | chr1.2:41543288-41543307 | MS.gene98989:CDS | 35.0% | |
| TTCCTTGCCATATAAGTTTG+CGG | - | chr1.2:41543283-41543302 | None:intergenic | 35.0% | |
| TTTAATAGACATTGGTCCCA+AGG | - | chr1.2:41541477-41541496 | None:intergenic | 35.0% | |
| TTTATCTTGAATGAGAGGGA+TGG | + | chr1.2:41541405-41541424 | MS.gene98989:intron | 35.0% | |
| TTTCAGCTGAAAATTCGATC+AGG | - | chr1.2:41542094-41542113 | None:intergenic | 35.0% | |
| ! | AAATCAAGGACTTGTTTGGA+TGG | + | chr1.2:41540695-41540714 | MS.gene98989:CDS | 35.0% |
| ! | CACAAAATCAAGGACTTGTT+TGG | + | chr1.2:41540691-41540710 | MS.gene98989:CDS | 35.0% |
| ! | CATGGCGTTTTTACGATTTT+TGG | + | chr1.2:41543202-41543221 | MS.gene98989:CDS | 35.0% |
| ! | GAATATAAGGTGTTTGGCTT+TGG | + | chr1.2:41542436-41542455 | MS.gene98989:CDS | 35.0% |
| ! | GCCACTTTATGTATGCTTAT+AGG | - | chr1.2:41541210-41541229 | None:intergenic | 35.0% |
| ! | GGTCCTTTCAAATGTTTTCA+TGG | + | chr1.2:41542002-41542021 | MS.gene98989:intron | 35.0% |
| ! | TCGAATTTTCAGCTGAAACT+TGG | + | chr1.2:41542096-41542115 | MS.gene98989:intron | 35.0% |
| ! | TCTTGGGAATATAAGGTGTT+TGG | + | chr1.2:41542430-41542449 | MS.gene98989:CDS | 35.0% |
| ! | TGAACTATTGGAATTAGCCT+CGG | - | chr1.2:41540669-41540688 | None:intergenic | 35.0% |
| ! | TTTCAAATGTTTTCATGGGC+CGG | + | chr1.2:41542007-41542026 | MS.gene98989:intron | 35.0% |
| ! | TTTTGGCCTCATAATGTTTG+GGG | - | chr1.2:41541819-41541838 | None:intergenic | 35.0% |
| !! | TAATTGTTGTTTATCGCCAC+CGG | - | chr1.2:41543393-41543412 | None:intergenic | 35.0% |
| AAAACACCAGGCCTAACATT+TGG | + | chr1.2:41542062-41542081 | MS.gene98989:intron | 40.0% | |
| AAGCTATCATCGAGAGCTTA+TGG | + | chr1.2:41541069-41541088 | MS.gene98989:intron | 40.0% | |
| AAGTCTAATACTCGTTGGCA+CGG | - | chr1.2:41541335-41541354 | None:intergenic | 40.0% | |
| AATAGTAATTACCTTGGGCC+TGG | + | chr1.2:41541981-41542000 | MS.gene98989:intron | 40.0% | |
| ACAGCAGACCAGAATATGAT+AGG | - | chr1.2:41541881-41541900 | None:intergenic | 40.0% | |
| ACCGTGATCTTGGGAATATA+AGG | + | chr1.2:41542423-41542442 | MS.gene98989:CDS | 40.0% | |
| ACTCGGCAATTAGAGCTATT+TGG | - | chr1.2:41542132-41542151 | None:intergenic | 40.0% | |
| ACTTACAGTTAGCATCCATG+TGG | - | chr1.2:41542729-41542748 | None:intergenic | 40.0% | |
| AGCTCTTATGAACCATCTCA+AGG | + | chr1.2:41542622-41542641 | MS.gene98989:CDS | 40.0% | |
| AGTACGAACCTGATGAATTG+GGG | - | chr1.2:41540795-41540814 | None:intergenic | 40.0% | |
| ATACGATCACCATCGTTTGT+AGG | - | chr1.2:41541737-41541756 | None:intergenic | 40.0% | |
| ATTTCTCATGCTTCCTAGGT+TGG | - | chr1.2:41541961-41541980 | None:intergenic | 40.0% | |
| CAAGTACGAACCTGATGAAT+TGG | - | chr1.2:41540797-41540816 | None:intergenic | 40.0% | |
| CAATTAAAGTTGAGGGTCAC+TGG | + | chr1.2:41543407-41543426 | MS.gene98989:CDS | 40.0% | |
| CACCGGAAAAATAAAGAGCT+AGG | - | chr1.2:41543376-41543395 | None:intergenic | 40.0% | |
| CAGCAGACCAGAATATGATA+GGG | - | chr1.2:41541880-41541899 | None:intergenic | 40.0% | |
| CCTAGATTCTGATATCTGCA+AGG | - | chr1.2:41542488-41542507 | None:intergenic | 40.0% | |
| CCTTGCAGATATCAGAATCT+AGG | + | chr1.2:41542485-41542504 | MS.gene98989:CDS | 40.0% | |
| CGTAAAAACGCCATGTAAAC+TGG | - | chr1.2:41543197-41543216 | None:intergenic | 40.0% | |
| CTCATTAGCAAGCTTCTGTT+TGG | - | chr1.2:41541932-41541951 | None:intergenic | 40.0% | |
| CTCGGCAATTAGAGCTATTT+GGG | - | chr1.2:41542131-41542150 | None:intergenic | 40.0% | |
| GAACATAATGTGTGGCCATT+TGG | - | chr1.2:41542362-41542381 | None:intergenic | 40.0% | |
| GGCCCATGAAAACATTTGAA+AGG | - | chr1.2:41542008-41542027 | None:intergenic | 40.0% | |
| TAATGAGTAGTCTCCAACCT+AGG | + | chr1.2:41541945-41541964 | MS.gene98989:intron | 40.0% | |
| TACACTGATCCTACAAACGA+TGG | + | chr1.2:41541725-41541744 | MS.gene98989:intron | 40.0% | |
| TAGTAAGACTTAGGCAAAGC+AGG | + | chr1.2:41541854-41541873 | MS.gene98989:intron | 40.0% | |
| TATCATATTCTGGTCTGCTG+TGG | + | chr1.2:41541880-41541899 | MS.gene98989:intron | 40.0% | |
| TATTTGTTCCAGTGCCCAAA+TGG | + | chr1.2:41542344-41542363 | MS.gene98989:intron | 40.0% | |
| TCACCCTACATGAATGAACA+TGG | - | chr1.2:41541250-41541269 | None:intergenic | 40.0% | |
| TCAGGATTGAGCCAAATGTT+AGG | - | chr1.2:41542076-41542095 | None:intergenic | 40.0% | |
| TCTGAATGATGAGTCCATCT+TGG | - | chr1.2:41543349-41543368 | None:intergenic | 40.0% | |
| TTGTGCAGACTTTGTAGTAG+AGG | - | chr1.2:41541306-41541325 | None:intergenic | 40.0% | |
| TTTGGCCTCATAATGTTTGG+GGG | - | chr1.2:41541818-41541837 | None:intergenic | 40.0% | |
| ! | GCATTTTTGCTTGCACTTTG+AGG | + | chr1.2:41543151-41543170 | MS.gene98989:CDS | 40.0% |
| ! | GCTTTAGCTTAGAGTGGTAT+GGG | - | chr1.2:41542526-41542545 | None:intergenic | 40.0% |
| ! | GTGGCATTTTCAACTTCATG+TGG | - | chr1.2:41542710-41542729 | None:intergenic | 40.0% |
| ! | TATGACCAGGCCCAAAATTT+TGG | - | chr1.2:41541836-41541855 | None:intergenic | 40.0% |
| ! | TGCTTTAGCTTAGAGTGGTA+TGG | - | chr1.2:41542527-41542546 | None:intergenic | 40.0% |
| !! | AGGGATGGATTGAGAAATGT+AGG | + | chr1.2:41541420-41541439 | MS.gene98989:intron | 40.0% |
| !! | GGGATGGATTGAGAAATGTA+GGG | + | chr1.2:41541421-41541440 | MS.gene98989:intron | 40.0% |
| !!! | CTAGCTCTTTATTTTTCCGG+TGG | + | chr1.2:41543374-41543393 | MS.gene98989:CDS | 40.0% |
| AAAGTTCGTGACAGCCAAGA+TGG | + | chr1.2:41543332-41543351 | MS.gene98989:CDS | 45.0% | |
| AAGCAGGCCCTATCATATTC+TGG | + | chr1.2:41541870-41541889 | MS.gene98989:intron | 45.0% | |
| AATTCAGCGGCTTCAATCCT+TGG | + | chr1.2:41541457-41541476 | MS.gene98989:intron | 45.0% | |
| AGCCGCAAACTTATATGGCA+AGG | + | chr1.2:41543278-41543297 | MS.gene98989:CDS | 45.0% | |
| AGTCTAATACTCGTTGGCAC+GGG | - | chr1.2:41541334-41541353 | None:intergenic | 45.0% | |
| ATGCACATCCTGTGAACGAA+AGG | + | chr1.2:41541680-41541699 | MS.gene98989:intron | 45.0% | |
| ATTCAGCGGCTTCAATCCTT+GGG | + | chr1.2:41541458-41541477 | MS.gene98989:intron | 45.0% | |
| ATTGAGCCAAATGTTAGGCC+TGG | - | chr1.2:41542071-41542090 | None:intergenic | 45.0% | |
| CAACATGTCACCGTGATCTT+GGG | + | chr1.2:41542414-41542433 | MS.gene98989:CDS | 45.0% | |
| CAAGATCACGGTGACATGTT+GGG | - | chr1.2:41542415-41542434 | None:intergenic | 45.0% | |
| CCATCTCAAGGATGATCACA+AGG | + | chr1.2:41542634-41542653 | MS.gene98989:CDS | 45.0% | |
| CCTTGTGATCATCCTTGAGA+TGG | - | chr1.2:41542637-41542656 | None:intergenic | 45.0% | |
| GACAGCTAAGTCTAAATCCG+AGG | + | chr1.2:41540649-41540668 | MS.gene98989:CDS | 45.0% | |
| GATGTATCCCCCAATTCATC+AGG | + | chr1.2:41540784-41540803 | MS.gene98989:CDS | 45.0% | |
| GCAATTAGAGCTATTTGGGC+AGG | - | chr1.2:41542127-41542146 | None:intergenic | 45.0% | |
| GCCTAAGTCTTACTATGACC+AGG | - | chr1.2:41541849-41541868 | None:intergenic | 45.0% | |
| GCCTGGTCATAGTAAGACTT+AGG | + | chr1.2:41541845-41541864 | MS.gene98989:intron | 45.0% | |
| GTACGAACCTGATGAATTGG+GGG | - | chr1.2:41540794-41540813 | None:intergenic | 45.0% | |
| TAGAGCTATTTGGGCAGGTA+AGG | - | chr1.2:41542122-41542141 | None:intergenic | 45.0% | |
| ! | AAATGTTTTCATGGGCCGGA+TGG | + | chr1.2:41542011-41542030 | MS.gene98989:intron | 45.0% |
| ! | AATGTTTGAAGTGGGGCTCA+TGG | + | chr1.2:41541765-41541784 | MS.gene98989:intron | 45.0% |
| ! | ATGTTTGAAGTGGGGCTCAT+GGG | + | chr1.2:41541766-41541785 | MS.gene98989:intron | 45.0% |
| ! | CTCATGGGTTGTGCTTTAAC+TGG | + | chr1.2:41541781-41541800 | MS.gene98989:intron | 45.0% |
| ! | GCTCATGCTTTAGCTTAGAG+TGG | - | chr1.2:41542532-41542551 | None:intergenic | 45.0% |
| ! | TGTTAGGCCTGGTGTTTTTC+AGG | - | chr1.2:41542060-41542079 | None:intergenic | 45.0% |
| !! | CACTTTGAGGCGTTTCTACT+TGG | + | chr1.2:41543164-41543183 | MS.gene98989:CDS | 45.0% |
| !! | GTGTTTGGCTTTGGAGAAAG+TGG | + | chr1.2:41542445-41542464 | MS.gene98989:CDS | 45.0% |
| !! | TTTGGCTTTGGAGAAAGTGG+CGG | + | chr1.2:41542448-41542467 | MS.gene98989:CDS | 45.0% |
| !!! | GGTTTTCGTTGGCCTTTGTT+GGG | + | chr1.2:41541901-41541920 | MS.gene98989:intron | 45.0% |
| !!! | GTGTTTTTCAGGCTGGGATT+GGG | - | chr1.2:41542049-41542068 | None:intergenic | 45.0% |
| !!! | TGGTTTTCGTTGGCCTTTGT+TGG | + | chr1.2:41541900-41541919 | MS.gene98989:intron | 45.0% |
| !!! | TGTTTTTCAGGCTGGGATTG+GGG | - | chr1.2:41542048-41542067 | None:intergenic | 45.0% |
| !! | TTTAAACATAAAAAAATATA+TGG | + | chr1.2:41540931-41540950 | MS.gene98989:intron | 5.0% |
| !!! | TCTATTAAATTTATTTTTAA+AGG | + | chr1.2:41541488-41541507 | MS.gene98989:intron | 5.0% |
| ACATCCTGTGAACGAAAGGC+CGG | + | chr1.2:41541684-41541703 | MS.gene98989:intron | 50.0% | |
| AGCACTCTGATCCAGCATAG+GGG | - | chr1.2:41542583-41542602 | None:intergenic | 50.0% | |
| ATCCCAGCCTGAAAAACACC+AGG | + | chr1.2:41542050-41542069 | MS.gene98989:intron | 50.0% | |
| ATTTGAAAGGACCAGGCCCA+AGG | - | chr1.2:41541995-41542014 | None:intergenic | 50.0% | |
| CACAAGGTCGACGTACATGA+TGG | + | chr1.2:41542650-41542669 | MS.gene98989:CDS | 50.0% | |
| CCAACATGTCACCGTGATCT+TGG | + | chr1.2:41542413-41542432 | MS.gene98989:CDS | 50.0% | |
| CCAAGATCACGGTGACATGT+TGG | - | chr1.2:41542416-41542435 | None:intergenic | 50.0% | |
| CCCTGACGGTCACAAAAACT+CGG | - | chr1.2:41542149-41542168 | None:intergenic | 50.0% | |
| CCTCATAATGTTTGGGGGCT+GGG | - | chr1.2:41541813-41541832 | None:intergenic | 50.0% | |
| GAGCACTCTGATCCAGCATA+GGG | - | chr1.2:41542584-41542603 | None:intergenic | 50.0% | |
| GTCTAATACTCGTTGGCACG+GGG | - | chr1.2:41541333-41541352 | None:intergenic | 50.0% | |
| TGAGGGTCACTGGTCGTATA+TGG | + | chr1.2:41543417-41543436 | MS.gene98989:CDS | 50.0% | |
| TGGCACAGCTCCAGTTTACA+TGG | + | chr1.2:41543184-41543203 | MS.gene98989:CDS | 50.0% | |
| ! | AAGCACCTGTGTCGCTGTTT+CGG | - | chr1.2:41541148-41541167 | None:intergenic | 50.0% |
| ! | AGAGCACTCTGATCCAGCAT+AGG | - | chr1.2:41542585-41542604 | None:intergenic | 50.0% |
| ! | CCGAGTTTTTGTGACCGTCA+GGG | + | chr1.2:41542146-41542165 | MS.gene98989:intron | 50.0% |
| ! | GGAGAAAGTGGCGGAATCAA+TGG | + | chr1.2:41542457-41542476 | MS.gene98989:CDS | 50.0% |
| ! | TGAGGCCAAAATTTTGGGCC+TGG | + | chr1.2:41541828-41541847 | MS.gene98989:intron | 50.0% |
| ! | TGCAAACAGGGCACTCAAGT+AGG | - | chr1.2:41540757-41540776 | None:intergenic | 50.0% |
| ! | TGGTCTGCTGTGGTTTTCGT+TGG | + | chr1.2:41541890-41541909 | MS.gene98989:intron | 50.0% |
| !! | TTCGTTGGCCTTTGTTGGGT+GGG | + | chr1.2:41541905-41541924 | MS.gene98989:intron | 50.0% |
| !! | TTTCGTTGGCCTTTGTTGGG+TGG | + | chr1.2:41541904-41541923 | MS.gene98989:intron | 50.0% |
| !!! | GGTGTTTTTCAGGCTGGGAT+TGG | - | chr1.2:41542050-41542069 | None:intergenic | 50.0% |
| AAGGGAGCTCATGACCCTGA+CGG | - | chr1.2:41542163-41542182 | None:intergenic | 55.0% | |
| AATGTTTGGGGGCTGGGATC+AGG | - | chr1.2:41541807-41541826 | None:intergenic | 55.0% | |
| ATGTGTGGCCATTTGGGCAC+TGG | - | chr1.2:41542355-41542374 | None:intergenic | 55.0% | |
| ATTCCCGGCCTTTCGTTCAC+AGG | - | chr1.2:41541691-41541710 | None:intergenic | 55.0% | |
| CACGGTGACATGTTGGGCAA+CGG | - | chr1.2:41542409-41542428 | None:intergenic | 55.0% | |
| CATCCTGTGAACGAAAGGCC+GGG | + | chr1.2:41541685-41541704 | MS.gene98989:intron | 55.0% | |
| CCAGCATAGGGGCAACTGTA+TGG | - | chr1.2:41542572-41542591 | None:intergenic | 55.0% | |
| CCATACAGTTGCCCCTATGC+TGG | + | chr1.2:41542569-41542588 | MS.gene98989:CDS | 55.0% | |
| CCCAGCCCCCAAACATTATG+AGG | + | chr1.2:41541810-41541829 | MS.gene98989:intron | 55.0% | |
| GCCTCATAATGTTTGGGGGC+TGG | - | chr1.2:41541814-41541833 | None:intergenic | 55.0% | |
| TGACTCTCGCGAATGCTCCT+TGG | - | chr1.2:41543308-41543327 | None:intergenic | 55.0% | |
| TGTTTGGCCCCACCCAACAA+AGG | - | chr1.2:41541916-41541935 | None:intergenic | 55.0% | |
| ! | GCCGAGTTTTTGTGACCGTC+AGG | + | chr1.2:41542145-41542164 | MS.gene98989:intron | 55.0% |
| !! | TCGTTGGCCTTTGTTGGGTG+GGG | + | chr1.2:41541906-41541925 | MS.gene98989:intron | 55.0% |
| !!! | AGGCCTGGTGTTTTTCAGGC+TGG | - | chr1.2:41542056-41542075 | None:intergenic | 55.0% |
| !!! | GGCCTGGTGTTTTTCAGGCT+GGG | - | chr1.2:41542055-41542074 | None:intergenic | 55.0% |
| GCTCTCCGAAACAGCGACAC+AGG | + | chr1.2:41541140-41541159 | MS.gene98989:intron | 60.0% | |
| GGGGCAGCAATGAGACCATC+CGG | - | chr1.2:41542029-41542048 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 41540584 | 41543451 | 41540584 | ID=MS.gene98989 |
| chr1.2 | mRNA | 41540584 | 41543451 | 41540584 | ID=MS.gene98989.t1;Parent=MS.gene98989 |
| chr1.2 | exon | 41540584 | 41540805 | 41540584 | ID=MS.gene98989.t1.exon1;Parent=MS.gene98989.t1 |
| chr1.2 | CDS | 41540584 | 41540805 | 41540584 | ID=cds.MS.gene98989.t1;Parent=MS.gene98989.t1 |
| chr1.2 | exon | 41542356 | 41542742 | 41542356 | ID=MS.gene98989.t1.exon2;Parent=MS.gene98989.t1 |
| chr1.2 | CDS | 41542356 | 41542742 | 41542356 | ID=cds.MS.gene98989.t1;Parent=MS.gene98989.t1 |
| chr1.2 | exon | 41543131 | 41543451 | 41543131 | ID=MS.gene98989.t1.exon3;Parent=MS.gene98989.t1 |
| chr1.2 | CDS | 41543131 | 41543451 | 41543131 | ID=cds.MS.gene98989.t1;Parent=MS.gene98989.t1 |
| Gene Sequence |
| Protein sequence |
