Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61205.t1 | XP_003597775.2 | 98.1 | 1004 | 19 | 0 | 1 | 1004 | 1 | 1004 | 0.00E+00 | 1974.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61205.t1 | F4HQE2 | 53.0 | 1023 | 417 | 14 | 1 | 1000 | 46 | 1027 | 1.1e-296 | 1020.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61205.t1 | G7II45 | 98.1 | 1004 | 19 | 0 | 1 | 1004 | 1 | 1004 | 0.0e+00 | 1974.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049251 | MS.gene61205 | 0.822596 | 2.18E-53 | -1.69E-46 |
MS.gene049596 | MS.gene61205 | 0.800657 | 1.30E-48 | -1.69E-46 |
MS.gene05124 | MS.gene61205 | 0.811041 | 8.54E-51 | -1.69E-46 |
MS.gene052367 | MS.gene61205 | 0.81225 | 4.66E-51 | -1.69E-46 |
MS.gene056266 | MS.gene61205 | -0.82762 | 1.41E-54 | -1.69E-46 |
MS.gene06093 | MS.gene61205 | 0.801386 | 9.23E-49 | -1.69E-46 |
MS.gene061260 | MS.gene61205 | 0.828535 | 8.52E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene034570 | MS.gene61205 | PPI |
MS.gene50517 | MS.gene61205 | PPI |
MS.gene61205 | MS.gene02480 | PPI |
MS.gene071737 | MS.gene61205 | PPI |
MS.gene055974 | MS.gene61205 | PPI |
MS.gene012051 | MS.gene61205 | PPI |
MS.gene012049 | MS.gene61205 | PPI |
MS.gene61205 | MS.gene52683 | PPI |
MS.gene04647 | MS.gene61205 | PPI |
MS.gene018013 | MS.gene61205 | PPI |
MS.gene89612 | MS.gene61205 | PPI |
MS.gene012053 | MS.gene61205 | PPI |
MS.gene39144 | MS.gene61205 | PPI |
MS.gene98989 | MS.gene61205 | PPI |
MS.gene96493 | MS.gene61205 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61205.t1 | MTR_2g102150 | 98.108 | 1004 | 19 | 0 | 1 | 1004 | 1 | 1004 | 0.0 | 2049 |
MS.gene61205.t1 | MTR_1g026490 | 34.367 | 774 | 428 | 20 | 4 | 724 | 17 | 763 | 2.99e-113 | 378 |
MS.gene61205.t1 | MTR_2g084735 | 24.456 | 781 | 427 | 27 | 4 | 702 | 3 | 702 | 7.09e-50 | 190 |
MS.gene61205.t1 | MTR_0147s0060 | 31.361 | 338 | 176 | 8 | 434 | 723 | 575 | 904 | 1.60e-41 | 165 |
MS.gene61205.t1 | MTR_0147s0060 | 32.961 | 179 | 88 | 3 | 97 | 248 | 199 | 372 | 5.94e-21 | 99.8 |
MS.gene61205.t1 | MTR_2g084735 | 28.920 | 287 | 188 | 6 | 416 | 702 | 518 | 788 | 1.31e-30 | 130 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61205.t1 | AT1G79950 | 53.055 | 1031 | 408 | 16 | 1 | 1002 | 46 | 1029 | 0.0 | 1061 |
MS.gene61205.t1 | AT1G79950 | 52.718 | 1030 | 395 | 16 | 1 | 1002 | 46 | 1011 | 0.0 | 1053 |
MS.gene61205.t1 | AT1G79950 | 62.968 | 748 | 257 | 6 | 1 | 736 | 46 | 785 | 0.0 | 992 |
MS.gene61205.t1 | AT1G79950 | 62.968 | 748 | 257 | 6 | 1 | 736 | 46 | 785 | 0.0 | 992 |
MS.gene61205.t1 | AT1G79950 | 62.716 | 751 | 261 | 5 | 1 | 739 | 46 | 789 | 0.0 | 991 |
MS.gene61205.t1 | AT1G79950 | 62.716 | 751 | 261 | 5 | 1 | 739 | 46 | 789 | 0.0 | 991 |
MS.gene61205.t1 | AT1G79950 | 62.716 | 751 | 261 | 5 | 1 | 739 | 46 | 789 | 0.0 | 991 |
MS.gene61205.t1 | AT1G20720 | 34.289 | 802 | 417 | 23 | 3 | 729 | 26 | 792 | 2.36e-127 | 416 |
MS.gene61205.t1 | AT1G20720 | 34.332 | 801 | 416 | 23 | 4 | 729 | 27 | 792 | 9.60e-127 | 416 |
MS.gene61205.t1 | AT1G20750 | 33.974 | 780 | 386 | 24 | 4 | 729 | 27 | 731 | 3.32e-109 | 365 |
MS.gene61205.t1 | AT1G79890 | 30.769 | 325 | 176 | 8 | 434 | 719 | 306 | 620 | 1.02e-38 | 154 |
MS.gene61205.t1 | AT1G79890 | 43.284 | 67 | 38 | 0 | 182 | 248 | 43 | 109 | 5.57e-12 | 70.5 |
MS.gene61205.t1 | AT1G79890 | 30.769 | 325 | 176 | 8 | 434 | 719 | 402 | 716 | 2.76e-38 | 154 |
MS.gene61205.t1 | AT1G79890 | 30.769 | 325 | 176 | 8 | 434 | 719 | 555 | 869 | 3.87e-38 | 154 |
MS.gene61205.t1 | AT1G79890 | 32.184 | 174 | 96 | 3 | 97 | 248 | 185 | 358 | 7.73e-20 | 95.9 |
MS.gene61205.t1 | AT1G03190 | 30.769 | 286 | 182 | 5 | 417 | 702 | 433 | 702 | 8.18e-32 | 134 |
MS.gene61205.t1 | AT1G03190 | 28.315 | 279 | 142 | 10 | 4 | 257 | 3 | 248 | 3.28e-20 | 97.1 |
MS.gene61205.t1 | AT1G03190 | 30.769 | 286 | 182 | 5 | 417 | 702 | 433 | 702 | 8.18e-32 | 134 |
MS.gene61205.t1 | AT1G03190 | 28.315 | 279 | 142 | 10 | 4 | 257 | 3 | 248 | 3.28e-20 | 97.1 |
MS.gene61205.t1 | AT1G79890 | 30.943 | 265 | 143 | 6 | 434 | 668 | 555 | 809 | 1.53e-28 | 124 |
MS.gene61205.t1 | AT1G79890 | 32.184 | 174 | 96 | 3 | 97 | 248 | 185 | 358 | 5.52e-20 | 96.7 |
Find 224 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCCTTTGACCTGCCTTCT+TGG | 0.081909 | 2.1:-3268331 | MS.gene61205:CDS |
TAAGATTTAGCTCACCTTTA+AGG | 0.092977 | 2.1:+3268204 | None:intergenic |
TCCATCATCAGAGCACTTTA+TGG | 0.163178 | 2.1:-3262472 | MS.gene61205:CDS |
CTTCCCATCTTATTACCTTT+TGG | 0.171305 | 2.1:-3265712 | MS.gene61205:CDS |
TATTTCTTCTTTCTATTAAA+AGG | 0.198738 | 2.1:+3268267 | None:intergenic |
TTCGCTAATCTTCAATGTTT+TGG | 0.223726 | 2.1:+3261324 | None:intergenic |
GTTGTACCTGTTGGTCCTTT+AGG | 0.229959 | 2.1:-3266552 | MS.gene61205:CDS |
TTGTACCTGTTGGTCCTTTA+GGG | 0.253981 | 2.1:-3266551 | MS.gene61205:CDS |
CATTCCTCATTCAGGGAATC+TGG | 0.261605 | 2.1:-3262502 | MS.gene61205:intron |
AATCATTTCAATCAAGTTCT+TGG | 0.262305 | 2.1:-3269729 | MS.gene61205:intron |
TGCTATAAATCTACGCTTCT+TGG | 0.271153 | 2.1:+3262041 | None:intergenic |
AATTTCCAATATGTTGCTTT+AGG | 0.275133 | 2.1:+3262007 | None:intergenic |
TTTAGCCTGGCGGAAGAGTT+TGG | 0.279946 | 2.1:-3270407 | MS.gene61205:CDS |
GAAAGGCTCTGCAAATTTCT+TGG | 0.282770 | 2.1:-3268639 | MS.gene61205:CDS |
GATTCCCTAGGTTCTATTAC+AGG | 0.295544 | 2.1:+3265539 | None:intergenic |
ATCGAGGATTTGGTCAATAT+TGG | 0.298594 | 2.1:-3268862 | MS.gene61205:CDS |
TTGCAGTGTTACTCAAGATT+TGG | 0.303013 | 2.1:-3263783 | MS.gene61205:intron |
ACTCCAGCCCATATCTGATT+TGG | 0.306758 | 2.1:+3266573 | None:intergenic |
GTAATGATAATTCATCAATA+TGG | 0.307317 | 2.1:-3265586 | MS.gene61205:CDS |
TTTGGCTGGTAGTTCTCAAC+TGG | 0.307704 | 2.1:-3262103 | MS.gene61205:CDS |
GTCAATATTGGCAAAACATC+CGG | 0.311110 | 2.1:-3268850 | MS.gene61205:CDS |
GGTAGAGCTGTGGTAGTTAC+TGG | 0.311931 | 2.1:-3264947 | MS.gene61205:CDS |
TTGGAAAATCCACATGTAAT+AGG | 0.320163 | 2.1:-3266597 | MS.gene61205:CDS |
GCCAATCCCAAGTCTCAAAA+TGG | 0.325879 | 2.1:-3263888 | MS.gene61205:CDS |
CTGGGAATCATAGGCTTCAT+AGG | 0.330426 | 2.1:+3271295 | None:intergenic |
ATTCGCCATCGCCATGACTA+TGG | 0.340959 | 2.1:-3264475 | MS.gene61205:CDS |
GCCTATGGATATCGAGGATT+TGG | 0.342469 | 2.1:-3268872 | MS.gene61205:CDS |
TAATAGGCCCAAATCAGATA+TGG | 0.345316 | 2.1:-3266581 | MS.gene61205:CDS |
TTGAAGCAAAATCCCAATCT+TGG | 0.347622 | 2.1:-3268901 | MS.gene61205:CDS |
AGAGGCTACCTCTCCTAAAA+AGG | 0.348921 | 2.1:-3261264 | MS.gene61205:intron |
CATAGGCTCTTCTCCAAGAT+TGG | 0.349649 | 2.1:+3268888 | None:intergenic |
AAATTTGACTCGAATTGTTC+CGG | 0.359310 | 2.1:-3265751 | MS.gene61205:CDS |
AATGTTTACCTCATCAATTA+AGG | 0.361886 | 2.1:-3265513 | MS.gene61205:intron |
TGTGAAGGAGGCGGAGGCTT+GGG | 0.362656 | 2.1:-3267514 | MS.gene61205:CDS |
AATTCTTCCAAAGCTATTCC+TGG | 0.364661 | 2.1:+3266808 | None:intergenic |
AGAACATGGCGGGTTTGATT+TGG | 0.380312 | 2.1:-3262121 | MS.gene61205:CDS |
TCATTATTAGAAGCTGAAAA+TGG | 0.382540 | 2.1:-3263696 | MS.gene61205:CDS |
TCACAGCTCTGGAGGCTTGT+TGG | 0.386535 | 2.1:+3264518 | None:intergenic |
CATATTGAATCCAAGGAGTT+GGG | 0.389616 | 2.1:-3267906 | MS.gene61205:CDS |
CAGACCTAAAATGACTGTTC+TGG | 0.397803 | 2.1:-3269865 | MS.gene61205:CDS |
GAAGCTTTCAAAGTGCAGTT+TGG | 0.400235 | 2.1:+3262306 | None:intergenic |
TTGCTTCGCACGCCTTCGAC+AGG | 0.401810 | 2.1:+3269764 | None:intergenic |
TATGACCTAAAGCAACATAT+TGG | 0.405427 | 2.1:-3262012 | MS.gene61205:CDS |
CTGAACGATACCACTGCATC+TGG | 0.405882 | 2.1:-3265382 | MS.gene61205:CDS |
TTAGCCTGGCGGAAGAGTTT+GGG | 0.406054 | 2.1:-3270406 | MS.gene61205:CDS |
CTCCAGCCCATATCTGATTT+GGG | 0.408400 | 2.1:+3266574 | None:intergenic |
TTGTATGAACAATATGTTGA+AGG | 0.409221 | 2.1:-3260512 | MS.gene61205:CDS |
TTAAGGATAGCAAAATCATC+TGG | 0.412226 | 2.1:+3268221 | None:intergenic |
GAGTACTTGGATCAACAATC+TGG | 0.414333 | 2.1:-3264677 | MS.gene61205:CDS |
GAGTTGGGGTTCACCAAACC+TGG | 0.415598 | 2.1:-3267891 | MS.gene61205:CDS |
AGCAAGGAATGCTGATCCTT+GGG | 0.420774 | 2.1:+3261752 | None:intergenic |
AGTTGAAACGGACATCTTAC+AGG | 0.421915 | 2.1:-3270237 | MS.gene61205:intron |
GTAAACGAGCTGGGAATCAT+AGG | 0.422780 | 2.1:+3271286 | None:intergenic |
CTTTAATCCAGGAATAGCTT+TGG | 0.423217 | 2.1:-3266815 | MS.gene61205:CDS |
TGCAGAATATATAGACTTTG+TGG | 0.423474 | 2.1:-3261368 | MS.gene61205:CDS |
TCGTTTAAAACGTGAGTACT+TGG | 0.426788 | 2.1:-3264690 | MS.gene61205:CDS |
GAGCAAGGAATGCTGATCCT+TGG | 0.430026 | 2.1:+3261751 | None:intergenic |
TCCGACCATAGGATGTTTGT+AGG | 0.435372 | 2.1:-3262207 | MS.gene61205:CDS |
TCATCGTCACAGTCAGAGCC+CGG | 0.441892 | 2.1:-3270328 | MS.gene61205:CDS |
TCTCCTGACTATCTTCTTCG+AGG | 0.443040 | 2.1:+3267778 | None:intergenic |
TTGGAGAGTCCCACAGGAAC+TGG | 0.443063 | 2.1:-3270457 | MS.gene61205:CDS |
ATGTGAAGGAGGCGGAGGCT+TGG | 0.444842 | 2.1:-3267515 | MS.gene61205:CDS |
TGATTCCCAGCTCGTTTACA+TGG | 0.445586 | 2.1:-3271282 | MS.gene61205:CDS |
TGGGCTGCCAATGGTTCTAT+AGG | 0.446258 | 2.1:-3267495 | MS.gene61205:intron |
TTCTATGTGCTACTTTAGCC+TGG | 0.447410 | 2.1:-3270420 | MS.gene61205:CDS |
AACAGCTTGATTCACAGCTC+TGG | 0.449253 | 2.1:+3264507 | None:intergenic |
GTCTTCTTTGCTGTTTGTCG+TGG | 0.452219 | 2.1:-3265355 | MS.gene61205:CDS |
AACTTACAATTTCAGTTCCT+CGG | 0.452949 | 2.1:+3266720 | None:intergenic |
TTGGAAGAATTTGCCAAGGA+TGG | 0.453822 | 2.1:-3266796 | MS.gene61205:CDS |
ATAGGCTCTTCTCCAAGATT+GGG | 0.455077 | 2.1:+3268889 | None:intergenic |
TCTTATGCTCAACAGGTTCA+AGG | 0.456622 | 2.1:-3260561 | MS.gene61205:intron |
AACTAGCAACATCTGCAGAT+TGG | 0.458183 | 2.1:-3267751 | MS.gene61205:CDS |
AGACCTAAAATGACTGTTCT+GGG | 0.461948 | 2.1:-3269864 | MS.gene61205:CDS |
CGTATCACGAGTGCGGTAAG+AGG | 0.462842 | 2.1:+3266515 | None:intergenic |
TTTGGTGAACCCCAACTCCT+TGG | 0.463008 | 2.1:+3267896 | None:intergenic |
TGGAGCAAAGCATTGGGTGC+TGG | 0.464354 | 2.1:-3265692 | MS.gene61205:CDS |
AGCGACGATACTCTTAAGCT+TGG | 0.473943 | 2.1:+3267815 | None:intergenic |
TCTCCTCGAAGAAGATAGTC+AGG | 0.475033 | 2.1:-3267781 | MS.gene61205:CDS |
TGGAAGAATTTGCCAAGGAT+GGG | 0.475670 | 2.1:-3266795 | MS.gene61205:CDS |
ACCCAATGCTTTGCTCCAAA+AGG | 0.477346 | 2.1:+3265697 | None:intergenic |
CTTTGCTGTTTGTCGTGGGA+AGG | 0.478775 | 2.1:-3265350 | MS.gene61205:intron |
AAAGTGCAGTTTGGATCCAC+TGG | 0.479285 | 2.1:+3262315 | None:intergenic |
TTTAGGAGAGGTAGCCTCTC+GGG | 0.479689 | 2.1:+3261268 | None:intergenic |
GCAGAATATATAGACTTTGT+GGG | 0.480088 | 2.1:-3261367 | MS.gene61205:CDS |
CACTACCTACAAACATCCTA+TGG | 0.482347 | 2.1:+3262202 | None:intergenic |
AGTTTGGGCAGTTTCTCAAC+CGG | 0.482462 | 2.1:-3270391 | MS.gene61205:CDS |
GTGTCAGAGACTTCCCCATT+CGG | 0.483142 | 2.1:-3266620 | MS.gene61205:intron |
CATCTTTGTCTTCCGACCAT+AGG | 0.483668 | 2.1:-3262218 | MS.gene61205:CDS |
GGTAGGAAACTTTGAGGCCC+CGG | 0.484760 | 2.1:+3270309 | None:intergenic |
TAATGATAATTCATCAATAT+GGG | 0.484998 | 2.1:-3265585 | MS.gene61205:CDS |
GACAAAGATGAGCGATTGGC+AGG | 0.486963 | 2.1:+3262231 | None:intergenic |
AGATCAATTATATTGACATC+AGG | 0.487682 | 2.1:-3266769 | MS.gene61205:CDS |
AGCTCCTTTGCTAAATGATA+AGG | 0.488599 | 2.1:+3268721 | None:intergenic |
GAAGTAGGTGTTGAATCAGC+AGG | 0.492694 | 2.1:+3261783 | None:intergenic |
CTACGCTTCTTGGTGATACA+AGG | 0.494122 | 2.1:+3262051 | None:intergenic |
GTACGCCCTAAAGGACCAAC+AGG | 0.496723 | 2.1:+3266546 | None:intergenic |
CAATCTTGGAGAAGAGCCTA+TGG | 0.498701 | 2.1:-3268887 | MS.gene61205:CDS |
GCGGAGGCTTGGGCTGCCAA+TGG | 0.499293 | 2.1:-3267504 | MS.gene61205:CDS |
GGCCCAAATCAGATATGGGC+TGG | 0.499726 | 2.1:-3266576 | MS.gene61205:CDS |
TGCTCCAAAAGGTAATAAGA+TGG | 0.499745 | 2.1:+3265708 | None:intergenic |
GCAGGAATCTAATGCACTGT+TGG | 0.499753 | 2.1:-3270476 | MS.gene61205:intron |
TCTAATGAGCAATCATCGTC+AGG | 0.502200 | 2.1:-3261985 | MS.gene61205:intron |
GGGCCACACTTCATTCATGC+AGG | 0.505852 | 2.1:-3262262 | MS.gene61205:CDS |
GCATATTGAATCCAAGGAGT+TGG | 0.505967 | 2.1:-3267907 | MS.gene61205:CDS |
ATGGAGTACAAGCAGGAGCT+TGG | 0.506354 | 2.1:-3266492 | MS.gene61205:CDS |
CTCAAGATTTCTACTTTGAG+AGG | 0.509043 | 2.1:+3261830 | None:intergenic |
CCTTGTCCATGTAAACGAGC+TGG | 0.511426 | 2.1:+3271276 | None:intergenic |
CATCGTCACAGTCAGAGCCC+GGG | 0.511849 | 2.1:-3270327 | MS.gene61205:CDS |
GAGTTAAAAGTACGCCCTAA+AGG | 0.511896 | 2.1:+3266537 | None:intergenic |
CATGGCGGGTTTGATTTGGC+TGG | 0.512062 | 2.1:-3262117 | MS.gene61205:CDS |
GGCACAAGGAGGGTCGTTCA+AGG | 0.512553 | 2.1:-3264654 | MS.gene61205:intron |
AAGTAATTCAAGAGTTGAAA+CGG | 0.514762 | 2.1:-3270249 | MS.gene61205:CDS |
AGCTGGTGGTGCTTTAATCC+AGG | 0.515173 | 2.1:-3266826 | MS.gene61205:CDS |
AATTGATCTAACCCCATCCT+TGG | 0.516304 | 2.1:+3266783 | None:intergenic |
TCTAACAGCTTGCATTTCTG+AGG | 0.518825 | 2.1:-3268306 | MS.gene61205:CDS |
TCCATAAAGTGCTCTGATGA+TGG | 0.518862 | 2.1:+3262471 | None:intergenic |
CTGCAGCACTGAGTTTATCT+CGG | 0.519399 | 2.1:+3261386 | None:intergenic |
CTTTATGGACAAATTTCACA+TGG | 0.520522 | 2.1:-3262457 | MS.gene61205:CDS |
GCGACGATACTCTTAAGCTT+GGG | 0.522526 | 2.1:+3267816 | None:intergenic |
AGGATCAGCATTCCTTGCTC+AGG | 0.523824 | 2.1:-3261748 | MS.gene61205:intron |
CAAGCTGTTAGAAGCCAAGA+AGG | 0.524674 | 2.1:+3268317 | None:intergenic |
TCTTCTTTGCTGTTTGTCGT+GGG | 0.530034 | 2.1:-3265354 | MS.gene61205:CDS |
CAGGAGCTTGGAAATGCAAT+CGG | 0.532518 | 2.1:-3266480 | MS.gene61205:intron |
CAGAGACTTCCCCATTCGGT+TGG | 0.533101 | 2.1:-3266616 | MS.gene61205:CDS |
CTGTTAGAAGCCAAGAAGGC+AGG | 0.533693 | 2.1:+3268321 | None:intergenic |
AATAGGCCCAAATCAGATAT+GGG | 0.533735 | 2.1:-3266580 | MS.gene61205:CDS |
CTGCAGATTGGAAACTATGA+AGG | 0.535410 | 2.1:-3267739 | MS.gene61205:CDS |
ATTCCTCATTCAGGGAATCT+GGG | 0.537306 | 2.1:-3262501 | MS.gene61205:intron |
GATGAAGTGAAGTTACTTCG+TGG | 0.537764 | 2.1:-3269816 | MS.gene61205:CDS |
AGAGCTGTGAATCAAGCTGT+TGG | 0.538267 | 2.1:-3264505 | MS.gene61205:CDS |
GATTCAACACCTACTTCTGA+TGG | 0.538593 | 2.1:-3261777 | MS.gene61205:CDS |
CATTGGGTGCTGGAAAAGCT+TGG | 0.539774 | 2.1:-3265682 | MS.gene61205:intron |
GGAAGAATTTGCCAAGGATG+GGG | 0.539850 | 2.1:-3266794 | MS.gene61205:CDS |
TGATTTGGGCCTATTACATG+TGG | 0.540052 | 2.1:+3266588 | None:intergenic |
TACAATGGTAGGAAACTTTG+AGG | 0.542709 | 2.1:+3270303 | None:intergenic |
AGTACTTGGATCAACAATCT+GGG | 0.545269 | 2.1:-3264676 | MS.gene61205:CDS |
CGTGAAGCATATACAATGGT+AGG | 0.545819 | 2.1:+3270292 | None:intergenic |
AAAACTACCTATAGAACCAT+TGG | 0.546677 | 2.1:+3267488 | None:intergenic |
TGCTGTTGCAAGAACATGGC+GGG | 0.547286 | 2.1:-3262131 | MS.gene61205:CDS |
CGATCAATAAGATAGTTGTA+TGG | 0.547860 | 2.1:+3268670 | None:intergenic |
GCACTGTTGGAGAGTCCCAC+AGG | 0.548865 | 2.1:-3270463 | MS.gene61205:CDS |
AGGTGTCAAGGACACTCAGC+TGG | 0.549179 | 2.1:-3266843 | MS.gene61205:CDS |
TTGACTCGAATTGTTCCGGA+TGG | 0.550682 | 2.1:-3265747 | MS.gene61205:CDS |
TGCCACAGTCAATGATCCTA+AGG | 0.552367 | 2.1:-3264915 | MS.gene61205:intron |
AAGAAGCGTAGATTTATAGC+AGG | 0.553378 | 2.1:-3262039 | MS.gene61205:CDS |
TTTCGAGATGGACGAACTCG+AGG | 0.553492 | 2.1:-3263732 | MS.gene61205:CDS |
AAGAATACAAGAAGTCCATC+CGG | 0.556621 | 2.1:+3265732 | None:intergenic |
GCTCCAAAAGGTAATAAGAT+GGG | 0.557503 | 2.1:+3265709 | None:intergenic |
TCAATATTGGCAAAACATCC+GGG | 0.561993 | 2.1:-3268849 | MS.gene61205:CDS |
GGATCATTGACTGTGGCATA+CGG | 0.562545 | 2.1:+3264920 | None:intergenic |
GTAGGAAACTTTGAGGCCCC+GGG | 0.563081 | 2.1:+3270310 | None:intergenic |
CAGTTTGGATCCACTGGTGT+AGG | 0.566854 | 2.1:+3262321 | None:intergenic |
CCTTGGGTTCCATCAGAAGT+AGG | 0.567538 | 2.1:+3261768 | None:intergenic |
GATCAACAATCTGGGGCACA+AGG | 0.568498 | 2.1:-3264668 | MS.gene61205:CDS |
CTTGTCCATGTAAACGAGCT+GGG | 0.569634 | 2.1:+3271277 | None:intergenic |
AACAATCTGGGGCACAAGGA+GGG | 0.570620 | 2.1:-3264664 | MS.gene61205:CDS |
AAAACCTGTAATAGAACCTA+GGG | 0.570641 | 2.1:-3265543 | MS.gene61205:CDS |
TACAACTATCTTATTGATCG+AGG | 0.572717 | 2.1:-3268667 | MS.gene61205:CDS |
ATGGATACAGCCTCACATCA+AGG | 0.573909 | 2.1:-3263869 | MS.gene61205:intron |
CTTGTCGATTTGCCTGTCGA+AGG | 0.575502 | 2.1:-3269776 | MS.gene61205:CDS |
GGAAGACAAAGATGAGCGAT+TGG | 0.576277 | 2.1:+3262227 | None:intergenic |
TGGGAATCATAGGCTTCATA+GGG | 0.577400 | 2.1:+3271296 | None:intergenic |
GTAAACATTGAAGATTCCCT+AGG | 0.577449 | 2.1:+3265527 | None:intergenic |
AAGCCAAGAAGGCAGGTCAA+AGG | 0.577591 | 2.1:+3268328 | None:intergenic |
ATGTTGCAGGCAAGGTGTCA+AGG | 0.577686 | 2.1:-3266855 | MS.gene61205:intron |
ACTGCCCAAACTCTTCCGCC+AGG | 0.579419 | 2.1:+3270402 | None:intergenic |
TGAGGTGCATATTGAATCCA+AGG | 0.580362 | 2.1:-3267913 | MS.gene61205:CDS |
ATTATTTAACAGGTTAGCGA+AGG | 0.581069 | 2.1:-3264992 | MS.gene61205:intron |
AGCTTGATTCACAGCTCTGG+AGG | 0.581906 | 2.1:+3264510 | None:intergenic |
TACTTGACGTATCTGACTGT+GGG | 0.583832 | 2.1:+3270267 | None:intergenic |
TGAACAATATGTTGAAGGAA+AGG | 0.584868 | 2.1:-3260507 | MS.gene61205:CDS |
ATAATTCATCAATATGGGAG+AGG | 0.588774 | 2.1:-3265580 | MS.gene61205:CDS |
GGTTCATGTGAAGGAGGCGG+AGG | 0.589354 | 2.1:-3267520 | MS.gene61205:CDS |
ATAGCTAGTCAAAATGCTCA+AGG | 0.592653 | 2.1:-3261885 | MS.gene61205:intron |
ATCGTCACAGTCAGAGCCCG+GGG | 0.592745 | 2.1:-3270326 | MS.gene61205:CDS |
AGCTTTGGAAGAATTTGCCA+AGG | 0.593924 | 2.1:-3266800 | MS.gene61205:CDS |
AAATAATTGCTCCATAGTCA+TGG | 0.594023 | 2.1:+3264464 | None:intergenic |
CCAGCTCGTTTACATGGACA+AGG | 0.597118 | 2.1:-3271276 | MS.gene61205:CDS |
TATTGATCGAGGGAAAAGAA+AGG | 0.604124 | 2.1:-3268656 | MS.gene61205:CDS |
ACCTACAAACATCCTATGGT+CGG | 0.604699 | 2.1:+3262206 | None:intergenic |
CAACAATCTGGGGCACAAGG+AGG | 0.604794 | 2.1:-3264665 | MS.gene61205:CDS |
ATATTATATCAACAGCCTTG+TGG | 0.609338 | 2.1:+3268698 | None:intergenic |
TGGGCTGGAGTTGTACCTGT+TGG | 0.611675 | 2.1:-3266561 | MS.gene61205:CDS |
ACAACTATCTTATTGATCGA+GGG | 0.614427 | 2.1:-3268666 | MS.gene61205:CDS |
GAGACTTGGGATTGGCGATG+AGG | 0.615009 | 2.1:+3263895 | None:intergenic |
TGATACGATGGAGTACAAGC+AGG | 0.615022 | 2.1:-3266499 | MS.gene61205:CDS |
CCAAGAAGGCAGGTCAAAGG+AGG | 0.616895 | 2.1:+3268331 | None:intergenic |
ACAGGTTCATGTGAAGGAGG+CGG | 0.617294 | 2.1:-3267523 | MS.gene61205:intron |
AGAAGAGCCTATGGATATCG+AGG | 0.617460 | 2.1:-3268878 | MS.gene61205:CDS |
ATTTGACGAAGCTCACAACC+TGG | 0.619370 | 2.1:-3268599 | MS.gene61205:intron |
ACCAAATCCTCGATATCCAT+AGG | 0.621202 | 2.1:+3268871 | None:intergenic |
ATATTGAATCCAAGGAGTTG+GGG | 0.622193 | 2.1:-3267905 | MS.gene61205:CDS |
TAATCATACCTTAATTGATG+AGG | 0.623130 | 2.1:+3265505 | None:intergenic |
TTGCTCCATAGTCATGGCGA+TGG | 0.623651 | 2.1:+3264470 | None:intergenic |
GAAGACAGCTCCAGATGCAG+TGG | 0.628263 | 2.1:+3265372 | None:intergenic |
CCTACTTCTGATGGAACCCA+AGG | 0.629812 | 2.1:-3261768 | MS.gene61205:CDS |
GGCCACACTTCATTCATGCA+GGG | 0.631738 | 2.1:-3262261 | MS.gene61205:CDS |
GTACATGCAGCCTACACCAG+TGG | 0.632422 | 2.1:-3262331 | MS.gene61205:intron |
TTGGCTGGTAGTTCTCAACT+GGG | 0.639905 | 2.1:-3262102 | MS.gene61205:CDS |
GGTCATGCAATCTCTTCAAG+AGG | 0.640444 | 2.1:-3271255 | MS.gene61205:intron |
ATTCCTCTGATCTTGTACGT+CGG | 0.640618 | 2.1:+3271332 | None:intergenic |
TTACTTGACGTATCTGACTG+TGG | 0.641325 | 2.1:+3270266 | None:intergenic |
GTGTCCTTATCATTTAGCAA+AGG | 0.645142 | 2.1:-3268725 | MS.gene61205:CDS |
ATGCCGACGTACAAGATCAG+AGG | 0.652078 | 2.1:-3271335 | MS.gene61205:CDS |
ACTGTGCTGTTGCAAGAACA+TGG | 0.652217 | 2.1:-3262135 | MS.gene61205:CDS |
TTACCGCACTCGTGATACGA+TGG | 0.652538 | 2.1:-3266511 | MS.gene61205:CDS |
AAAACAGGTTCATGTGAAGG+AGG | 0.653336 | 2.1:-3267526 | MS.gene61205:intron |
TCCTCGGCAAAAGAGTCTAG+AGG | 0.655667 | 2.1:+3266736 | None:intergenic |
TGTCAAGGACACTCAGCTGG+TGG | 0.658313 | 2.1:-3266840 | MS.gene61205:CDS |
CAAACTAGCACCTTGATGTG+AGG | 0.660811 | 2.1:+3263859 | None:intergenic |
ACTTGAAAAGCGTATTGCTG+AGG | 0.665212 | 2.1:-3267931 | MS.gene61205:CDS |
AGTTGGGGTTCACCAAACCT+GGG | 0.676738 | 2.1:-3267890 | MS.gene61205:CDS |
TTTAGCAAAGGAGCTCCACA+AGG | 0.678361 | 2.1:-3268713 | MS.gene61205:CDS |
AGATCATGCAGGTAGAGCTG+TGG | 0.683689 | 2.1:-3264957 | MS.gene61205:CDS |
CGGTGATAAAGGTAAAACTG+AGG | 0.698997 | 2.1:-3270353 | MS.gene61205:CDS |
TATGTGCTACTTTAGCCTGG+CGG | 0.703167 | 2.1:-3270417 | MS.gene61205:CDS |
CTCCCTGCATGAATGAAGTG+TGG | 0.714336 | 2.1:+3262259 | None:intergenic |
AACCTTAGGATCATTGACTG+TGG | 0.715684 | 2.1:+3264913 | None:intergenic |
GTACTTGGATCAACAATCTG+GGG | 0.720348 | 2.1:-3264675 | MS.gene61205:CDS |
TTATTAGAAGCTGAAAATGG+CGG | 0.720450 | 2.1:-3263693 | MS.gene61205:intron |
AAGTTCAAGTGATACACGCG+AGG | 0.722707 | 2.1:-3262178 | MS.gene61205:CDS |
ACTCCATCGTATCACGAGTG+CGG | 0.723139 | 2.1:+3266508 | None:intergenic |
GGTGCGTGAAGCATATACAA+TGG | 0.780238 | 2.1:+3270288 | None:intergenic |
GTGCTGTTGCAAGAACATGG+CGG | 0.792598 | 2.1:-3262132 | MS.gene61205:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 3260499 | 3271357 | 3260499 | ID=MS.gene61205 |
chr2.1 | mRNA | 3260499 | 3271357 | 3260499 | ID=MS.gene61205.t1;Parent=MS.gene61205 |
chr2.1 | exon | 3271256 | 3271357 | 3271256 | ID=MS.gene61205.t1.exon1;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3271256 | 3271357 | 3271256 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3270238 | 3270494 | 3270238 | ID=MS.gene61205.t1.exon2;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3270238 | 3270494 | 3270238 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3269730 | 3269884 | 3269730 | ID=MS.gene61205.t1.exon3;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3269730 | 3269884 | 3269730 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3268847 | 3268928 | 3268847 | ID=MS.gene61205.t1.exon4;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3268847 | 3268928 | 3268847 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3268600 | 3268747 | 3268600 | ID=MS.gene61205.t1.exon5;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3268600 | 3268747 | 3268600 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3268219 | 3268375 | 3268219 | ID=MS.gene61205.t1.exon6;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3268219 | 3268375 | 3268219 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3267683 | 3267966 | 3267683 | ID=MS.gene61205.t1.exon7;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3267683 | 3267966 | 3267683 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3267496 | 3267541 | 3267496 | ID=MS.gene61205.t1.exon8;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3267496 | 3267541 | 3267496 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3266727 | 3266868 | 3266727 | ID=MS.gene61205.t1.exon9;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3266727 | 3266868 | 3266727 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3266481 | 3266635 | 3266481 | ID=MS.gene61205.t1.exon10;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3266481 | 3266635 | 3266481 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3265683 | 3265774 | 3265683 | ID=MS.gene61205.t1.exon11;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3265683 | 3265774 | 3265683 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3265514 | 3265609 | 3265514 | ID=MS.gene61205.t1.exon12;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3265514 | 3265609 | 3265514 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3265351 | 3265419 | 3265351 | ID=MS.gene61205.t1.exon13;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3265351 | 3265419 | 3265351 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3264916 | 3265002 | 3264916 | ID=MS.gene61205.t1.exon14;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3264916 | 3265002 | 3264916 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3264655 | 3264714 | 3264655 | ID=MS.gene61205.t1.exon15;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3264655 | 3264714 | 3264655 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3264451 | 3264566 | 3264451 | ID=MS.gene61205.t1.exon16;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3264451 | 3264566 | 3264451 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3263870 | 3263927 | 3263870 | ID=MS.gene61205.t1.exon17;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3263870 | 3263927 | 3263870 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3263694 | 3263799 | 3263694 | ID=MS.gene61205.t1.exon18;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3263694 | 3263799 | 3263694 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3262437 | 3262510 | 3262437 | ID=MS.gene61205.t1.exon19;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3262437 | 3262510 | 3262437 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3261986 | 3262343 | 3261986 | ID=MS.gene61205.t1.exon20;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3261986 | 3262343 | 3261986 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3261749 | 3261903 | 3261749 | ID=MS.gene61205.t1.exon21;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3261749 | 3261903 | 3261749 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3261265 | 3261410 | 3261265 | ID=MS.gene61205.t1.exon22;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3261265 | 3261410 | 3261265 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
chr2.1 | exon | 3260499 | 3260568 | 3260499 | ID=MS.gene61205.t1.exon23;Parent=MS.gene61205.t1 |
chr2.1 | CDS | 3260499 | 3260568 | 3260499 | ID=cds.MS.gene61205.t1;Parent=MS.gene61205.t1 |
Gene Sequence |
Protein sequence |