Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96493.t1 | XP_013467697.1 | 99.4 | 309 | 2 | 0 | 1 | 309 | 1 | 309 | 2.30E-185 | 657.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96493.t1 | Q9M2P4 | 78.4 | 306 | 65 | 1 | 4 | 309 | 4 | 308 | 9.9e-145 | 514.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96493.t1 | A0A072VI80 | 99.4 | 309 | 2 | 0 | 1 | 309 | 1 | 309 | 1.7e-185 | 657.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene36292 | MS.gene96493 | PPI |
| MS.gene018013 | MS.gene96493 | PPI |
| MS.gene96493 | MS.gene39144 | PPI |
| MS.gene96493 | MS.gene91723 | PPI |
| MS.gene96493 | MS.gene034570 | PPI |
| MS.gene96493 | MS.gene04647 | PPI |
| MS.gene96493 | MS.gene90302 | PPI |
| MS.gene96493 | MS.gene89107 | PPI |
| MS.gene96493 | MS.gene055974 | PPI |
| MS.gene96493 | MS.gene64538 | PPI |
| MS.gene96493 | MS.gene055308 | PPI |
| MS.gene50517 | MS.gene96493 | PPI |
| MS.gene96493 | MS.gene52683 | PPI |
| MS.gene96493 | MS.gene50517 | PPI |
| MS.gene96493 | MS.gene61205 | PPI |
| MS.gene96493 | MS.gene98989 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96493.t1 | MTR_1g054335 | 99.353 | 309 | 2 | 0 | 1 | 309 | 1 | 309 | 0.0 | 645 |
| MS.gene96493.t1 | MTR_7g093600 | 80.323 | 310 | 60 | 1 | 1 | 309 | 1 | 310 | 0.0 | 530 |
| MS.gene96493.t1 | MTR_1g008120 | 70.790 | 291 | 78 | 1 | 19 | 309 | 36 | 319 | 6.36e-156 | 439 |
| MS.gene96493.t1 | MTR_3g091510 | 74.717 | 265 | 67 | 0 | 45 | 309 | 47 | 311 | 2.87e-154 | 434 |
| MS.gene96493.t1 | MTR_3g017590 | 74.525 | 263 | 66 | 1 | 47 | 309 | 43 | 304 | 3.11e-152 | 429 |
| MS.gene96493.t1 | MTR_8g027520 | 70.438 | 274 | 81 | 0 | 36 | 309 | 31 | 304 | 2.50e-151 | 427 |
| MS.gene96493.t1 | MTR_8g027520 | 70.438 | 274 | 81 | 0 | 36 | 309 | 22 | 295 | 2.87e-151 | 426 |
| MS.gene96493.t1 | MTR_7g117415 | 71.863 | 263 | 74 | 0 | 47 | 309 | 50 | 312 | 1.05e-146 | 415 |
| MS.gene96493.t1 | MTR_8g038370 | 71.206 | 257 | 74 | 0 | 53 | 309 | 107 | 363 | 1.46e-145 | 414 |
| MS.gene96493.t1 | MTR_5g076660 | 26.957 | 230 | 152 | 5 | 43 | 266 | 12 | 231 | 1.47e-22 | 96.3 |
| MS.gene96493.t1 | MTR_7g024290 | 26.667 | 210 | 144 | 4 | 58 | 267 | 11 | 210 | 9.84e-20 | 88.2 |
| MS.gene96493.t1 | MTR_4g094468 | 36.090 | 133 | 78 | 3 | 57 | 189 | 96 | 221 | 1.02e-19 | 88.2 |
| MS.gene96493.t1 | MTR_5g067400 | 26.122 | 245 | 162 | 5 | 57 | 301 | 10 | 235 | 2.48e-19 | 87.0 |
| MS.gene96493.t1 | MTR_2g038430 | 31.783 | 129 | 83 | 2 | 58 | 183 | 25 | 151 | 8.02e-19 | 85.9 |
| MS.gene96493.t1 | MTR_5g076540 | 29.386 | 228 | 141 | 6 | 58 | 280 | 11 | 223 | 2.37e-18 | 82.8 |
| MS.gene96493.t1 | MTR_5g061290 | 25.909 | 220 | 150 | 7 | 58 | 276 | 18 | 225 | 3.12e-18 | 84.0 |
| MS.gene96493.t1 | MTR_7g094390 | 29.940 | 167 | 111 | 3 | 58 | 224 | 172 | 332 | 3.06e-17 | 82.4 |
| MS.gene96493.t1 | MTR_5g076370 | 25.957 | 235 | 160 | 7 | 71 | 305 | 47 | 267 | 6.77e-17 | 80.5 |
| MS.gene96493.t1 | MTR_2g038420 | 29.323 | 133 | 91 | 2 | 58 | 190 | 25 | 154 | 2.21e-16 | 79.0 |
| MS.gene96493.t1 | MTR_5g076520 | 31.579 | 171 | 111 | 3 | 54 | 224 | 7 | 171 | 1.21e-15 | 76.6 |
| MS.gene96493.t1 | MTR_1g046650 | 24.419 | 258 | 171 | 6 | 57 | 301 | 10 | 256 | 9.70e-15 | 73.9 |
| MS.gene96493.t1 | MTR_1g046650 | 24.419 | 258 | 171 | 6 | 57 | 301 | 41 | 287 | 1.10e-14 | 73.9 |
| MS.gene96493.t1 | MTR_5g076720 | 26.122 | 245 | 164 | 6 | 58 | 302 | 82 | 309 | 1.23e-14 | 74.3 |
| MS.gene96493.t1 | MTR_5g076820 | 25.100 | 251 | 154 | 8 | 58 | 301 | 19 | 242 | 1.24e-14 | 73.2 |
| MS.gene96493.t1 | MTR_1g046640 | 25.000 | 248 | 168 | 7 | 58 | 305 | 11 | 240 | 9.38e-14 | 70.9 |
| MS.gene96493.t1 | MTR_5g076505 | 29.060 | 117 | 80 | 2 | 74 | 190 | 23 | 136 | 2.66e-11 | 63.9 |
| MS.gene96493.t1 | MTR_1g046650 | 23.333 | 240 | 160 | 6 | 75 | 301 | 28 | 256 | 6.68e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96493.t1 | AT3G58040 | 77.994 | 309 | 67 | 1 | 1 | 309 | 1 | 308 | 0.0 | 507 |
| MS.gene96493.t1 | AT3G58040 | 77.994 | 309 | 67 | 1 | 1 | 309 | 1 | 308 | 0.0 | 507 |
| MS.gene96493.t1 | AT2G41980 | 77.670 | 309 | 65 | 2 | 1 | 309 | 1 | 305 | 3.60e-179 | 497 |
| MS.gene96493.t1 | AT4G27880 | 72.830 | 265 | 72 | 0 | 45 | 309 | 48 | 312 | 4.85e-152 | 429 |
| MS.gene96493.t1 | AT3G61790 | 75.290 | 259 | 64 | 0 | 51 | 309 | 53 | 311 | 5.64e-152 | 429 |
| MS.gene96493.t1 | AT5G53360 | 75.490 | 204 | 50 | 0 | 106 | 309 | 15 | 218 | 4.79e-118 | 339 |
| MS.gene96493.t1 | AT5G53360 | 75.490 | 204 | 50 | 0 | 106 | 309 | 15 | 218 | 4.79e-118 | 339 |
| MS.gene96493.t1 | AT3G58040 | 69.683 | 221 | 65 | 2 | 1 | 221 | 1 | 219 | 1.28e-108 | 315 |
| MS.gene96493.t1 | AT3G13672 | 54.857 | 175 | 76 | 1 | 138 | 309 | 38 | 212 | 2.09e-70 | 218 |
| MS.gene96493.t1 | AT3G13672 | 48.020 | 202 | 75 | 2 | 138 | 309 | 38 | 239 | 7.37e-65 | 204 |
| MS.gene96493.t1 | AT5G53360 | 74.528 | 106 | 27 | 0 | 204 | 309 | 60 | 165 | 1.81e-56 | 181 |
| MS.gene96493.t1 | AT5G37870 | 39.062 | 128 | 75 | 2 | 57 | 184 | 41 | 165 | 8.94e-25 | 101 |
| MS.gene96493.t1 | AT5G37930 | 38.806 | 134 | 79 | 2 | 57 | 190 | 109 | 239 | 3.64e-23 | 98.2 |
| MS.gene96493.t1 | AT5G37890 | 26.721 | 247 | 166 | 6 | 57 | 301 | 47 | 280 | 6.03e-21 | 90.9 |
| MS.gene96493.t1 | AT1G66620 | 41.489 | 94 | 55 | 0 | 57 | 150 | 40 | 133 | 3.06e-19 | 86.7 |
| MS.gene96493.t1 | AT5G62800 | 27.059 | 255 | 158 | 7 | 57 | 301 | 39 | 275 | 4.96e-19 | 86.7 |
| MS.gene96493.t1 | AT5G62800 | 28.037 | 214 | 130 | 5 | 57 | 260 | 39 | 238 | 9.81e-19 | 85.1 |
| MS.gene96493.t1 | AT5G37910 | 36.364 | 121 | 75 | 1 | 57 | 177 | 34 | 152 | 1.74e-18 | 84.0 |
| MS.gene96493.t1 | AT1G66650 | 35.556 | 135 | 82 | 3 | 57 | 188 | 82 | 214 | 6.43e-18 | 83.2 |
| MS.gene96493.t1 | AT1G66660 | 37.500 | 112 | 68 | 1 | 57 | 168 | 102 | 211 | 2.60e-17 | 81.6 |
| MS.gene96493.t1 | AT1G66630 | 36.885 | 122 | 73 | 2 | 57 | 176 | 45 | 164 | 1.42e-16 | 79.0 |
| MS.gene96493.t1 | AT1G66610 | 35.000 | 100 | 56 | 1 | 43 | 133 | 134 | 233 | 1.27e-13 | 69.7 |
| MS.gene96493.t1 | AT1G66610 | 44.444 | 63 | 35 | 0 | 57 | 119 | 52 | 114 | 7.33e-11 | 61.6 |
| MS.gene96493.t1 | AT1G66610 | 44.444 | 63 | 35 | 0 | 57 | 119 | 52 | 114 | 2.53e-11 | 64.3 |
Find 71 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAAATCAAGGGCTTGTT+TGG | 0.241684 | 1.4:+44085516 | MS.gene96493:CDS |
| TTTGACATAACGATGGTTAA+AGG | 0.268093 | 1.4:-44087503 | None:intergenic |
| AGAAAGAAGCAAAGAAATTT+AGG | 0.283423 | 1.4:+44088056 | MS.gene96493:CDS |
| CAAATAGCCGCAAACTTATA+TGG | 0.307974 | 1.4:+44088098 | MS.gene96493:CDS |
| CAAGTACGAACCTGATGAAT+TGG | 0.312951 | 1.4:-44085619 | None:intergenic |
| ATGTTCAAATTGTAAGATTA+CGG | 0.337638 | 1.4:+44087201 | MS.gene96493:CDS |
| CACTTTGAGGCGTTTCTACT+TGG | 0.338233 | 1.4:+44087989 | MS.gene96493:CDS |
| CCAACATGTCACCGTGATCT+TGG | 0.342485 | 1.4:+44087238 | MS.gene96493:CDS |
| TACATCAAATTCTTGCAAAC+AGG | 0.347642 | 1.4:-44085592 | None:intergenic |
| TGAGGGTCACTGGTCGTATA+TGG | 0.351201 | 1.4:+44088242 | MS.gene96493:CDS |
| GAATATAAGGTGTTTGGCTT+TGG | 0.353568 | 1.4:+44087261 | MS.gene96493:CDS |
| TCTCAAAATCTGAAAATATC+AGG | 0.364559 | 1.4:-44085453 | None:intergenic |
| GAACATAATGTGTGGCCATT+TGG | 0.366483 | 1.4:-44087184 | None:intergenic |
| CCTTGCAGATATCAGAATCT+AGG | 0.378860 | 1.4:+44087310 | MS.gene96493:CDS |
| AACATAATGTGTGGCCATTT+GGG | 0.389709 | 1.4:-44087183 | None:intergenic |
| TGCTTTAGCTTAGAGTGGTA+TGG | 0.391166 | 1.4:-44087349 | None:intergenic |
| TCTTGGGAATATAAGGTGTT+TGG | 0.396349 | 1.4:+44087255 | MS.gene96493:CDS |
| AAGTACGAACCTGATGAATT+GGG | 0.406932 | 1.4:-44085618 | None:intergenic |
| CAACATGTCACCGTGATCTT+GGG | 0.423076 | 1.4:+44087239 | MS.gene96493:CDS |
| CTGAATATTTCAATGGATCT+AGG | 0.429675 | 1.4:+44085397 | None:intergenic |
| CAAGATCACGGTGACATGTT+GGG | 0.450043 | 1.4:-44087237 | None:intergenic |
| ACCGTGATCTTGGGAATATA+AGG | 0.454771 | 1.4:+44087248 | MS.gene96493:CDS |
| CCAGCATAGGGGCAACTGTA+TGG | 0.454990 | 1.4:-44087394 | None:intergenic |
| GGAGAAAGTGGCGGAATCAA+TGG | 0.455505 | 1.4:+44087282 | MS.gene96493:CDS |
| AAATCAAGGGCTTGTTTGGA+TGG | 0.457064 | 1.4:+44085520 | MS.gene96493:CDS |
| CCATACAGTTGCCCCTATGC+TGG | 0.466797 | 1.4:+44087394 | MS.gene96493:CDS |
| ATAGTTCATTCACAAAATCA+AGG | 0.471657 | 1.4:+44085506 | MS.gene96493:CDS |
| TATTTGTTCCAGTGCCCAAA+TGG | 0.471812 | 1.4:+44087169 | MS.gene96493:intron |
| GCTTGTTTGGATGGAAAGAA+TGG | 0.472348 | 1.4:+44085529 | MS.gene96493:CDS |
| TTCCTTGCCATATAAGTTTG+CGG | 0.472513 | 1.4:-44088105 | None:intergenic |
| AATGGAAATCATTCAAAGAA+TGG | 0.473460 | 1.4:+44085547 | MS.gene96493:CDS |
| TCTGAATGATGAGTCCATCT+TGG | 0.475128 | 1.4:-44088171 | None:intergenic |
| TGGCACAGCTCCAGTTTACA+TGG | 0.477030 | 1.4:+44088009 | MS.gene96493:CDS |
| TGGTTCAAGAACTTCTTTGA+AGG | 0.477924 | 1.4:-44085428 | None:intergenic |
| TGACTCTCGCGAATGCTCCT+TGG | 0.482817 | 1.4:-44088130 | None:intergenic |
| CAATTAAAGTTGAGGGTCAC+TGG | 0.483429 | 1.4:+44088232 | MS.gene96493:CDS |
| GTGTTTGGCTTTGGAGAAAG+TGG | 0.490790 | 1.4:+44087270 | MS.gene96493:CDS |
| TTTAGGTATAGCTTAGAAGT+TGG | 0.491687 | 1.4:+44088073 | MS.gene96493:CDS |
| GCTTTAGCTTAGAGTGGTAT+GGG | 0.501913 | 1.4:-44087348 | None:intergenic |
| TAATTGTTGTTTATCGCCAC+CGG | 0.503340 | 1.4:-44088215 | None:intergenic |
| TAAACAACAATTAAAGTTGA+GGG | 0.518775 | 1.4:+44088225 | MS.gene96493:CDS |
| GAGCACTCTGATCCAGCATA+GGG | 0.522726 | 1.4:-44087406 | None:intergenic |
| GCTCATGCTTTAGCTTAGAG+TGG | 0.522927 | 1.4:-44087354 | None:intergenic |
| CCAAGATCACGGTGACATGT+TGG | 0.534401 | 1.4:-44087238 | None:intergenic |
| CCTTGTGATCATCCTTGAGA+TGG | 0.535656 | 1.4:-44087459 | None:intergenic |
| TGAACTATTGGAATTAGCCT+CGG | 0.540112 | 1.4:-44085491 | None:intergenic |
| AAAGTTCGTGACAGCCAAGA+TGG | 0.548328 | 1.4:+44088157 | MS.gene96493:CDS |
| CACAAGGTCGACGTACATGA+TGG | 0.550537 | 1.4:+44087475 | MS.gene96493:CDS |
| AGCCGCAAACTTATATGGCA+AGG | 0.559593 | 1.4:+44088103 | MS.gene96493:CDS |
| ATAAACAACAATTAAAGTTG+AGG | 0.561013 | 1.4:+44088224 | MS.gene96493:CDS |
| CACGGTGACATGTTGGGCAA+CGG | 0.570767 | 1.4:-44087231 | None:intergenic |
| TGCAAACAGGGCACTCAAGT+AGG | 0.572689 | 1.4:-44085579 | None:intergenic |
| AGAGCACTCTGATCCAGCAT+AGG | 0.575084 | 1.4:-44087407 | None:intergenic |
| TAGTTCATTCACAAAATCAA+GGG | 0.593181 | 1.4:+44085507 | MS.gene96493:CDS |
| TACAATTTGAACATAATGTG+TGG | 0.595926 | 1.4:-44087192 | None:intergenic |
| AAATCTGAAAATATCAGGTG+TGG | 0.607252 | 1.4:-44085448 | None:intergenic |
| CCATCTCAAGGATGATCACA+AGG | 0.608998 | 1.4:+44087459 | MS.gene96493:CDS |
| ACATCAAATTCTTGCAAACA+GGG | 0.610530 | 1.4:-44085591 | None:intergenic |
| TTATATGGCAAGGAATTCCA+AGG | 0.613859 | 1.4:+44088113 | MS.gene96493:CDS |
| ACCTTATATTCCCAAGATCA+CGG | 0.615283 | 1.4:-44087249 | None:intergenic |
| AGTACGAACCTGATGAATTG+GGG | 0.619005 | 1.4:-44085617 | None:intergenic |
| CCTAGATTCTGATATCTGCA+AGG | 0.629196 | 1.4:-44087310 | None:intergenic |
| AGCTCTTATGAACCATCTCA+AGG | 0.629365 | 1.4:+44087447 | MS.gene96493:CDS |
| TTTGGCTTTGGAGAAAGTGG+CGG | 0.652459 | 1.4:+44087273 | MS.gene96493:CDS |
| GACAGCTAAGTCTAAATCCG+AGG | 0.663173 | 1.4:+44085474 | MS.gene96493:CDS |
| AATATTTCAATGGATCTAGG+AGG | 0.676694 | 1.4:+44085400 | None:intergenic |
| GTACGAACCTGATGAATTGG+GGG | 0.683219 | 1.4:-44085616 | None:intergenic |
| GATTTGATTTGACATAACGA+TGG | 0.690993 | 1.4:-44087510 | None:intergenic |
| ATGAAGTTGAAAATGCCACA+TGG | 0.708825 | 1.4:+44087536 | MS.gene96493:CDS |
| AGCACTCTGATCCAGCATAG+GGG | 0.715799 | 1.4:-44087405 | None:intergenic |
| ACTTACAGTTAGCATCCATG+TGG | 0.763259 | 1.4:-44087551 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATTTAATAGACAT+TGG | - | chr1.4:44086310-44086329 | None:intergenic | 10.0% |
| !! | ATCTATTAAAATAAGTATTA+GGG | - | chr1.4:44087098-44087117 | None:intergenic | 10.0% |
| !!! | ATTTTTTTATGTTTAAATCA+TGG | - | chr1.4:44085753-44085772 | None:intergenic | 10.0% |
| !! | AAAAAATTAGCTAACATTTA+AGG | - | chr1.4:44087007-44087026 | None:intergenic | 15.0% |
| !! | AAAAATTAGCTAACATTTAA+GGG | - | chr1.4:44087006-44087025 | None:intergenic | 15.0% |
| !! | CATCTATTAAAATAAGTATT+AGG | - | chr1.4:44087099-44087118 | None:intergenic | 15.0% |
| !! | AACAAATAATTCAGTTATCA+AGG | - | chr1.4:44087157-44087176 | None:intergenic | 20.0% |
| !! | ACTTATTTGAACTTATCAAT+TGG | - | chr1.4:44085999-44086018 | None:intergenic | 20.0% |
| !! | AGAAATAATAGTAATTACCT+TGG | + | chr1.4:44086800-44086819 | MS.gene96493:intron | 20.0% |
| !! | ATAAACAACAATTAAAGTTG+AGG | + | chr1.4:44088224-44088243 | MS.gene96493:CDS | 20.0% |
| !! | ATGTTCAAATTGTAAGATTA+CGG | + | chr1.4:44087201-44087220 | MS.gene96493:CDS | 20.0% |
| !! | GAAATAATAGTAATTACCTT+GGG | + | chr1.4:44086801-44086820 | MS.gene96493:intron | 20.0% |
| !! | TAAACAACAATTAAAGTTGA+GGG | + | chr1.4:44088225-44088244 | MS.gene96493:CDS | 20.0% |
| !! | TGTACTCTATACAAAATTAT+TGG | + | chr1.4:44087799-44087818 | MS.gene96493:intron | 20.0% |
| !!! | GCTACATCATTTAATATTTT+TGG | + | chr1.4:44086399-44086418 | MS.gene96493:intron | 20.0% |
| ! | AAAAAATATATGGTCCTGTT+TGG | + | chr1.4:44085766-44085785 | MS.gene96493:intron | 25.0% |
| ! | AAAAATATATGGTCCTGTTT+GGG | + | chr1.4:44085767-44085786 | MS.gene96493:intron | 25.0% |
| ! | AACTGTTTCAAAGTAAATCA+AGG | - | chr1.4:44087898-44087917 | None:intergenic | 25.0% |
| ! | AATGGAAATCATTCAAAGAA+TGG | + | chr1.4:44085547-44085566 | MS.gene96493:CDS | 25.0% |
| ! | ACTCTATACAAAATTATTGG+AGG | + | chr1.4:44087802-44087821 | MS.gene96493:intron | 25.0% |
| ! | ACTGTTTCAAAGTAAATCAA+GGG | - | chr1.4:44087897-44087916 | None:intergenic | 25.0% |
| ! | AGAAAGAAGCAAAGAAATTT+AGG | + | chr1.4:44088056-44088075 | MS.gene96493:CDS | 25.0% |
| ! | ATAGTTCATTCACAAAATCA+AGG | + | chr1.4:44085506-44085525 | MS.gene96493:CDS | 25.0% |
| ! | TACAATTTGAACATAATGTG+TGG | - | chr1.4:44087195-44087214 | None:intergenic | 25.0% |
| ! | TAGTTCATTCACAAAATCAA+GGG | + | chr1.4:44085507-44085526 | MS.gene96493:CDS | 25.0% |
| ! | TCTATTTATCTTGAATGAGA+GGG | + | chr1.4:44086226-44086245 | MS.gene96493:intron | 25.0% |
| ! | TCTCAAAATCTGAAAATATC+AGG | - | chr1.4:44085456-44085475 | None:intergenic | 25.0% |
| ! | TCTTTGTATAATGTTTGAAG+TGG | + | chr1.4:44086581-44086600 | MS.gene96493:intron | 25.0% |
| ! | TGTATCAGCAAAATTGTTAT+AGG | + | chr1.4:44087641-44087660 | MS.gene96493:intron | 25.0% |
| ! | TTAAAGGTTGTAATCATGAT+AGG | + | chr1.4:44086329-44086348 | MS.gene96493:intron | 25.0% |
| ! | TTAAGTGCTTATCATATAAG+TGG | + | chr1.4:44085802-44085821 | MS.gene96493:intron | 25.0% |
| ! | TTCTATTTATCTTGAATGAG+AGG | + | chr1.4:44086225-44086244 | MS.gene96493:intron | 25.0% |
| !! | AATTTTGCTGATACAAATCT+AGG | - | chr1.4:44087636-44087655 | None:intergenic | 25.0% |
| !! | CTTTGTATAATGTTTGAAGT+GGG | + | chr1.4:44086582-44086601 | MS.gene96493:intron | 25.0% |
| !! | TGATTTTGTGAATGAACTAT+TGG | - | chr1.4:44085506-44085525 | None:intergenic | 25.0% |
| !! | TTTGTATAATGTTTGAAGTG+GGG | + | chr1.4:44086583-44086602 | MS.gene96493:intron | 25.0% |
| !!! | TTTTTTACAGATTCAACAGA+TGG | + | chr1.4:44087576-44087595 | MS.gene96493:intron | 25.0% |
| AAATCTGAAAATATCAGGTG+TGG | - | chr1.4:44085451-44085470 | None:intergenic | 30.0% | |
| AATTGAAGTCTAATACTCGT+TGG | - | chr1.4:44086165-44086184 | None:intergenic | 30.0% | |
| ACATCAAATTCTTGCAAACA+GGG | - | chr1.4:44085594-44085613 | None:intergenic | 30.0% | |
| AGTGTAACTAACAAATTCAG+CGG | + | chr1.4:44086269-44086288 | MS.gene96493:intron | 30.0% | |
| ATTTCCATGTTCATTCATGT+AGG | + | chr1.4:44086068-44086087 | MS.gene96493:intron | 30.0% | |
| GTTCATGACAAATTTCTCAA+AGG | - | chr1.4:44086361-44086380 | None:intergenic | 30.0% | |
| TACAGTTCAGCAATTCATTA+GGG | - | chr1.4:44086193-44086212 | None:intergenic | 30.0% | |
| TACATCAAATTCTTGCAAAC+AGG | - | chr1.4:44085595-44085614 | None:intergenic | 30.0% | |
| TCTAATCTACATATCTTTGC+AGG | + | chr1.4:44087934-44087953 | MS.gene96493:intron | 30.0% | |
| TGCTTATCATATAAGTGGTT+AGG | + | chr1.4:44085807-44085826 | MS.gene96493:intron | 30.0% | |
| TTACAGTTCAGCAATTCATT+AGG | - | chr1.4:44086194-44086213 | None:intergenic | 30.0% | |
| TTTAGGTATAGCTTAGAAGT+TGG | + | chr1.4:44088073-44088092 | MS.gene96493:CDS | 30.0% | |
| TTTCCATGTTCATTCATGTA+GGG | + | chr1.4:44086069-44086088 | MS.gene96493:intron | 30.0% | |
| TTTGACATAACGATGGTTAA+AGG | - | chr1.4:44087506-44087525 | None:intergenic | 30.0% | |
| ! | ACATTATGAGGCCAAAATTT+TGG | + | chr1.4:44086647-44086666 | MS.gene96493:intron | 30.0% |
| ! | ATGGCGTTTTTACGATTTTT+GGG | + | chr1.4:44088028-44088047 | MS.gene96493:CDS | 30.0% |
| ! | CATTATGAGGCCAAAATTTT+GGG | + | chr1.4:44086648-44086667 | MS.gene96493:intron | 30.0% |
| ! | GTCCTTTCAAATGTTTTCAT+GGG | + | chr1.4:44086828-44086847 | MS.gene96493:intron | 30.0% |
| ! | TTGCAGGTTTTCAATTGTTT+TGG | + | chr1.4:44087950-44087969 | MS.gene96493:intron | 30.0% |
| !! | AATTTTGGCCTCATAATGTT+TGG | - | chr1.4:44086646-44086665 | None:intergenic | 30.0% |
| !! | AGCATGTGTTTTTGTGTATT+TGG | + | chr1.4:44085696-44085715 | MS.gene96493:intron | 30.0% |
| !! | ATTTTGGCCTCATAATGTTT+GGG | - | chr1.4:44086645-44086664 | None:intergenic | 30.0% |
| !! | GATTTGATTTGACATAACGA+TGG | - | chr1.4:44087513-44087532 | None:intergenic | 30.0% |
| !! | GCTACTAAATTTCAAGTTGA+AGG | - | chr1.4:44085679-44085698 | None:intergenic | 30.0% |
| !! | TAAGCAATAAAAGTGCTATG+TGG | - | chr1.4:44086106-44086125 | None:intergenic | 30.0% |
| !! | TTTGCAGATTTGTTAACATC+AGG | + | chr1.4:44087714-44087733 | MS.gene96493:intron | 30.0% |
| !!! | AACCTAGCTCTTTATTTTTC+CGG | + | chr1.4:44088196-44088215 | MS.gene96493:CDS | 30.0% |
| AACATAATGTGTGGCCATTT+GGG | - | chr1.4:44087186-44087205 | None:intergenic | 35.0% | |
| AAGTACGAACCTGATGAATT+GGG | - | chr1.4:44085621-44085640 | None:intergenic | 35.0% | |
| ACCTTATATTCCCAAGATCA+CGG | - | chr1.4:44087252-44087271 | None:intergenic | 35.0% | |
| ACGCACATTTCATTTATTCC+CGG | - | chr1.4:44086531-44086550 | None:intergenic | 35.0% | |
| ATCAAGATGTTTACCCAAAC+AGG | - | chr1.4:44085783-44085802 | None:intergenic | 35.0% | |
| ATGAAGTTGAAAATGCCACA+TGG | + | chr1.4:44087536-44087555 | MS.gene96493:CDS | 35.0% | |
| CAAATAGCCGCAAACTTATA+TGG | + | chr1.4:44088098-44088117 | MS.gene96493:CDS | 35.0% | |
| GCCTATAAGCATACATAAAG+TGG | + | chr1.4:44086031-44086050 | MS.gene96493:intron | 35.0% | |
| TAACAAGCAGATGAGAAGTT+TGG | + | chr1.4:44086435-44086454 | MS.gene96493:intron | 35.0% | |
| TAGCAGTATACATCAAGAGA+AGG | - | chr1.4:44086383-44086402 | None:intergenic | 35.0% | |
| TGAAAACATTTGAAAGGACC+AGG | - | chr1.4:44086827-44086846 | None:intergenic | 35.0% | |
| TGGTTCAAGAACTTCTTTGA+AGG | - | chr1.4:44085431-44085450 | None:intergenic | 35.0% | |
| TTAGTTGATCACAGTTCATG+TGG | + | chr1.4:44087052-44087071 | MS.gene96493:intron | 35.0% | |
| TTATATGGCAAGGAATTCCA+AGG | + | chr1.4:44088113-44088132 | MS.gene96493:CDS | 35.0% | |
| TTCCTTGCCATATAAGTTTG+CGG | - | chr1.4:44088108-44088127 | None:intergenic | 35.0% | |
| TTTAATAGACATTGGTCCCA+AGG | - | chr1.4:44086302-44086321 | None:intergenic | 35.0% | |
| TTTATCTTGAATGAGAGGGA+TGG | + | chr1.4:44086230-44086249 | MS.gene96493:intron | 35.0% | |
| ! | AATCCTGATCGAATTTTCAG+CGG | + | chr1.4:44086913-44086932 | MS.gene96493:intron | 35.0% |
| ! | CATGGCGTTTTTACGATTTT+TGG | + | chr1.4:44088027-44088046 | MS.gene96493:CDS | 35.0% |
| ! | GAATATAAGGTGTTTGGCTT+TGG | + | chr1.4:44087261-44087280 | MS.gene96493:CDS | 35.0% |
| ! | GCCACTTTATGTATGCTTAT+AGG | - | chr1.4:44086035-44086054 | None:intergenic | 35.0% |
| ! | GGTCCTTTCAAATGTTTTCA+TGG | + | chr1.4:44086827-44086846 | MS.gene96493:intron | 35.0% |
| ! | TATTATTTCTCATGCGTCCT+AGG | - | chr1.4:44086790-44086809 | None:intergenic | 35.0% |
| ! | TCTTGGGAATATAAGGTGTT+TGG | + | chr1.4:44087255-44087274 | MS.gene96493:CDS | 35.0% |
| ! | TGAACTATTGGAATTAGCCT+CGG | - | chr1.4:44085494-44085513 | None:intergenic | 35.0% |
| ! | TTTCAAATGTTTTCATGGGC+CGG | + | chr1.4:44086832-44086851 | MS.gene96493:intron | 35.0% |
| ! | TTTTGGCCTCATAATGTTTG+GGG | - | chr1.4:44086644-44086663 | None:intergenic | 35.0% |
| !! | TAATTGTTGTTTATCGCCAC+CGG | - | chr1.4:44088218-44088237 | None:intergenic | 35.0% |
| AAAACACCAGGCCTAACATT+TGG | + | chr1.4:44086887-44086906 | MS.gene96493:intron | 40.0% | |
| AAGCTATCATCGAGAGCTTA+TGG | + | chr1.4:44085894-44085913 | MS.gene96493:intron | 40.0% | |
| AAGTCTAATACTCGTTGGCA+CGG | - | chr1.4:44086160-44086179 | None:intergenic | 40.0% | |
| AATAGTAATTACCTTGGGCC+TGG | + | chr1.4:44086806-44086825 | MS.gene96493:intron | 40.0% | |
| ACAGCAGACCAGAATATGAT+AGG | - | chr1.4:44086706-44086725 | None:intergenic | 40.0% | |
| ACCGTGATCTTGGGAATATA+AGG | + | chr1.4:44087248-44087267 | MS.gene96493:CDS | 40.0% | |
| ACTCGGCAATTAGAGCTATT+TGG | - | chr1.4:44086957-44086976 | None:intergenic | 40.0% | |
| ACTTACAGTTAGCATCCATG+TGG | - | chr1.4:44087554-44087573 | None:intergenic | 40.0% | |
| AGCTCTTATGAACCATCTCA+AGG | + | chr1.4:44087447-44087466 | MS.gene96493:CDS | 40.0% | |
| AGTACGAACCTGATGAATTG+GGG | - | chr1.4:44085620-44085639 | None:intergenic | 40.0% | |
| ATACGATCACCATCGTTTGT+AGG | - | chr1.4:44086562-44086581 | None:intergenic | 40.0% | |
| ATGCATATCCTGTGAACGAA+AGG | + | chr1.4:44086505-44086524 | MS.gene96493:intron | 40.0% | |
| CAAGTACGAACCTGATGAAT+TGG | - | chr1.4:44085622-44085641 | None:intergenic | 40.0% | |
| CAATTAAAGTTGAGGGTCAC+TGG | + | chr1.4:44088232-44088251 | MS.gene96493:CDS | 40.0% | |
| CACCGGAAAAATAAAGAGCT+AGG | - | chr1.4:44088201-44088220 | None:intergenic | 40.0% | |
| CAGCAGACCAGAATATGATA+GGG | - | chr1.4:44086705-44086724 | None:intergenic | 40.0% | |
| CCTAGATTCTGATATCTGCA+AGG | - | chr1.4:44087313-44087332 | None:intergenic | 40.0% | |
| CCTTGCAGATATCAGAATCT+AGG | + | chr1.4:44087310-44087329 | MS.gene96493:CDS | 40.0% | |
| CGTAAAAACGCCATGTAAAC+TGG | - | chr1.4:44088022-44088041 | None:intergenic | 40.0% | |
| CTCATTAGCAAGCTTCTGTT+TGG | - | chr1.4:44086757-44086776 | None:intergenic | 40.0% | |
| CTCGGCAATTAGAGCTATTT+GGG | - | chr1.4:44086956-44086975 | None:intergenic | 40.0% | |
| GAACATAATGTGTGGCCATT+TGG | - | chr1.4:44087187-44087206 | None:intergenic | 40.0% | |
| GCTTGTTTGGATGGAAAGAA+TGG | + | chr1.4:44085529-44085548 | MS.gene96493:CDS | 40.0% | |
| GGCCCATGAAAACATTTGAA+AGG | - | chr1.4:44086833-44086852 | None:intergenic | 40.0% | |
| TAATGAGTAGTCTCCAACCT+AGG | + | chr1.4:44086770-44086789 | MS.gene96493:intron | 40.0% | |
| TACACTGATCCTACAAACGA+TGG | + | chr1.4:44086550-44086569 | MS.gene96493:intron | 40.0% | |
| TAGTAAGACTTAGGCAAAGC+AGG | + | chr1.4:44086679-44086698 | MS.gene96493:intron | 40.0% | |
| TATCATATTCTGGTCTGCTG+TGG | + | chr1.4:44086705-44086724 | MS.gene96493:intron | 40.0% | |
| TATTTGTTCCAGTGCCCAAA+TGG | + | chr1.4:44087169-44087188 | MS.gene96493:intron | 40.0% | |
| TCACCCTACATGAATGAACA+TGG | - | chr1.4:44086075-44086094 | None:intergenic | 40.0% | |
| TCAGGATTGAGCCAAATGTT+AGG | - | chr1.4:44086901-44086920 | None:intergenic | 40.0% | |
| TCTGAATGATGAGTCCATCT+TGG | - | chr1.4:44088174-44088193 | None:intergenic | 40.0% | |
| TTGTGCAGACTTTGTAGTAG+AGG | - | chr1.4:44086131-44086150 | None:intergenic | 40.0% | |
| TTTCCGCTGAAAATTCGATC+AGG | - | chr1.4:44086919-44086938 | None:intergenic | 40.0% | |
| TTTGGCCTCATAATGTTTGG+GGG | - | chr1.4:44086643-44086662 | None:intergenic | 40.0% | |
| ! | AAATCAAGGGCTTGTTTGGA+TGG | + | chr1.4:44085520-44085539 | MS.gene96493:CDS | 40.0% |
| ! | CACAAAATCAAGGGCTTGTT+TGG | + | chr1.4:44085516-44085535 | MS.gene96493:CDS | 40.0% |
| ! | GCATTTTTGCTTGCACTTTG+AGG | + | chr1.4:44087976-44087995 | MS.gene96493:CDS | 40.0% |
| ! | GCTTTAGCTTAGAGTGGTAT+GGG | - | chr1.4:44087351-44087370 | None:intergenic | 40.0% |
| ! | GTGGCATTTTCAACTTCATG+TGG | - | chr1.4:44087535-44087554 | None:intergenic | 40.0% |
| ! | TATGACCAGGCCCAAAATTT+TGG | - | chr1.4:44086661-44086680 | None:intergenic | 40.0% |
| ! | TCGAATTTTCAGCGGAAACT+TGG | + | chr1.4:44086921-44086940 | MS.gene96493:intron | 40.0% |
| ! | TGCTTTAGCTTAGAGTGGTA+TGG | - | chr1.4:44087352-44087371 | None:intergenic | 40.0% |
| !! | AGGGATGGATTGAGAAATGT+AGG | + | chr1.4:44086245-44086264 | MS.gene96493:intron | 40.0% |
| !! | GGGATGGATTGAGAAATGTA+GGG | + | chr1.4:44086246-44086265 | MS.gene96493:intron | 40.0% |
| !!! | CTAGCTCTTTATTTTTCCGG+TGG | + | chr1.4:44088199-44088218 | MS.gene96493:CDS | 40.0% |
| AAAGTTCGTGACAGCCAAGA+TGG | + | chr1.4:44088157-44088176 | MS.gene96493:CDS | 45.0% | |
| AAGCAGGCCCTATCATATTC+TGG | + | chr1.4:44086695-44086714 | MS.gene96493:intron | 45.0% | |
| AATTCAGCGGCTTCAATCCT+TGG | + | chr1.4:44086282-44086301 | MS.gene96493:intron | 45.0% | |
| AGCCGCAAACTTATATGGCA+AGG | + | chr1.4:44088103-44088122 | MS.gene96493:CDS | 45.0% | |
| AGTCTAATACTCGTTGGCAC+GGG | - | chr1.4:44086159-44086178 | None:intergenic | 45.0% | |
| ATATCCTGTGAACGAAAGGC+CGG | + | chr1.4:44086509-44086528 | MS.gene96493:intron | 45.0% | |
| ATTCAGCGGCTTCAATCCTT+GGG | + | chr1.4:44086283-44086302 | MS.gene96493:intron | 45.0% | |
| ATTGAGCCAAATGTTAGGCC+TGG | - | chr1.4:44086896-44086915 | None:intergenic | 45.0% | |
| ATTTCTCATGCGTCCTAGGT+TGG | - | chr1.4:44086786-44086805 | None:intergenic | 45.0% | |
| CAACATGTCACCGTGATCTT+GGG | + | chr1.4:44087239-44087258 | MS.gene96493:CDS | 45.0% | |
| CAAGATCACGGTGACATGTT+GGG | - | chr1.4:44087240-44087259 | None:intergenic | 45.0% | |
| CCATCTCAAGGATGATCACA+AGG | + | chr1.4:44087459-44087478 | MS.gene96493:CDS | 45.0% | |
| CCTTGTGATCATCCTTGAGA+TGG | - | chr1.4:44087462-44087481 | None:intergenic | 45.0% | |
| GACAGCTAAGTCTAAATCCG+AGG | + | chr1.4:44085474-44085493 | MS.gene96493:CDS | 45.0% | |
| GATGTATCCCCCAATTCATC+AGG | + | chr1.4:44085609-44085628 | MS.gene96493:CDS | 45.0% | |
| GCAATTAGAGCTATTTGGGC+AGG | - | chr1.4:44086952-44086971 | None:intergenic | 45.0% | |
| GCCTAAGTCTTACTATGACC+AGG | - | chr1.4:44086674-44086693 | None:intergenic | 45.0% | |
| GCCTGGTCATAGTAAGACTT+AGG | + | chr1.4:44086670-44086689 | MS.gene96493:intron | 45.0% | |
| GTACGAACCTGATGAATTGG+GGG | - | chr1.4:44085619-44085638 | None:intergenic | 45.0% | |
| TAGAGCTATTTGGGCAGGTA+AGG | - | chr1.4:44086947-44086966 | None:intergenic | 45.0% | |
| ! | AAATGTTTTCATGGGCCGGA+TGG | + | chr1.4:44086836-44086855 | MS.gene96493:intron | 45.0% |
| ! | AATGTTTGAAGTGGGGCTCA+TGG | + | chr1.4:44086590-44086609 | MS.gene96493:intron | 45.0% |
| ! | ATGTTTGAAGTGGGGCTCAT+GGG | + | chr1.4:44086591-44086610 | MS.gene96493:intron | 45.0% |
| ! | CTCATGGGTTGTGCTTTAAC+TGG | + | chr1.4:44086606-44086625 | MS.gene96493:intron | 45.0% |
| ! | GCTCATGCTTTAGCTTAGAG+TGG | - | chr1.4:44087357-44087376 | None:intergenic | 45.0% |
| ! | TGTTAGGCCTGGTGTTTTTC+AGG | - | chr1.4:44086885-44086904 | None:intergenic | 45.0% |
| !! | CACTTTGAGGCGTTTCTACT+TGG | + | chr1.4:44087989-44088008 | MS.gene96493:CDS | 45.0% |
| !! | GTGTTTGGCTTTGGAGAAAG+TGG | + | chr1.4:44087270-44087289 | MS.gene96493:CDS | 45.0% |
| !! | TTTGGCTTTGGAGAAAGTGG+CGG | + | chr1.4:44087273-44087292 | MS.gene96493:CDS | 45.0% |
| !!! | GGTTTTCGTTGGCCTTTGTT+GGG | + | chr1.4:44086726-44086745 | MS.gene96493:intron | 45.0% |
| !!! | GTGTTTTTCAGGCTGGGATT+GGG | - | chr1.4:44086874-44086893 | None:intergenic | 45.0% |
| !!! | TGGTTTTCGTTGGCCTTTGT+TGG | + | chr1.4:44086725-44086744 | MS.gene96493:intron | 45.0% |
| !!! | TGTTTTTCAGGCTGGGATTG+GGG | - | chr1.4:44086873-44086892 | None:intergenic | 45.0% |
| !! | TTTAAACATAAAAAAATATA+TGG | + | chr1.4:44085756-44085775 | MS.gene96493:intron | 5.0% |
| !!! | TCTATTAAATTTATTTTTAA+AGG | + | chr1.4:44086313-44086332 | MS.gene96493:intron | 5.0% |
| AGCACTCTGATCCAGCATAG+GGG | - | chr1.4:44087408-44087427 | None:intergenic | 50.0% | |
| ATCCCAGCCTGAAAAACACC+AGG | + | chr1.4:44086875-44086894 | MS.gene96493:intron | 50.0% | |
| ATTTGAAAGGACCAGGCCCA+AGG | - | chr1.4:44086820-44086839 | None:intergenic | 50.0% | |
| CACAAGGTCGACGTACATGA+TGG | + | chr1.4:44087475-44087494 | MS.gene96493:CDS | 50.0% | |
| CCAACATGTCACCGTGATCT+TGG | + | chr1.4:44087238-44087257 | MS.gene96493:CDS | 50.0% | |
| CCAAGATCACGGTGACATGT+TGG | - | chr1.4:44087241-44087260 | None:intergenic | 50.0% | |
| CCCTGACGGTCACAAAAACT+CGG | - | chr1.4:44086974-44086993 | None:intergenic | 50.0% | |
| CCTCATAATGTTTGGGGGCT+GGG | - | chr1.4:44086638-44086657 | None:intergenic | 50.0% | |
| GAGCACTCTGATCCAGCATA+GGG | - | chr1.4:44087409-44087428 | None:intergenic | 50.0% | |
| GTCTAATACTCGTTGGCACG+GGG | - | chr1.4:44086158-44086177 | None:intergenic | 50.0% | |
| TATCCTGTGAACGAAAGGCC+GGG | + | chr1.4:44086510-44086529 | MS.gene96493:intron | 50.0% | |
| TGAGGGTCACTGGTCGTATA+TGG | + | chr1.4:44088242-44088261 | MS.gene96493:CDS | 50.0% | |
| TGGCACAGCTCCAGTTTACA+TGG | + | chr1.4:44088009-44088028 | MS.gene96493:CDS | 50.0% | |
| ! | AAGCACCTGTGTCGCTGTTT+CGG | - | chr1.4:44085973-44085992 | None:intergenic | 50.0% |
| ! | AGAGCACTCTGATCCAGCAT+AGG | - | chr1.4:44087410-44087429 | None:intergenic | 50.0% |
| ! | CCGAGTTTTTGTGACCGTCA+GGG | + | chr1.4:44086971-44086990 | MS.gene96493:intron | 50.0% |
| ! | GGAGAAAGTGGCGGAATCAA+TGG | + | chr1.4:44087282-44087301 | MS.gene96493:CDS | 50.0% |
| ! | TGAGGCCAAAATTTTGGGCC+TGG | + | chr1.4:44086653-44086672 | MS.gene96493:intron | 50.0% |
| ! | TGCAAACAGGGCACTCAAGT+AGG | - | chr1.4:44085582-44085601 | None:intergenic | 50.0% |
| ! | TGGTCTGCTGTGGTTTTCGT+TGG | + | chr1.4:44086715-44086734 | MS.gene96493:intron | 50.0% |
| !! | TTCGTTGGCCTTTGTTGGGT+GGG | + | chr1.4:44086730-44086749 | MS.gene96493:intron | 50.0% |
| !! | TTTCGTTGGCCTTTGTTGGG+TGG | + | chr1.4:44086729-44086748 | MS.gene96493:intron | 50.0% |
| !!! | GGTGTTTTTCAGGCTGGGAT+TGG | - | chr1.4:44086875-44086894 | None:intergenic | 50.0% |
| AAGGGAGCTCATGACCCTGA+CGG | - | chr1.4:44086988-44087007 | None:intergenic | 55.0% | |
| AATGTTTGGGGGCTGGGATC+AGG | - | chr1.4:44086632-44086651 | None:intergenic | 55.0% | |
| ATGTGTGGCCATTTGGGCAC+TGG | - | chr1.4:44087180-44087199 | None:intergenic | 55.0% | |
| ATTCCCGGCCTTTCGTTCAC+AGG | - | chr1.4:44086516-44086535 | None:intergenic | 55.0% | |
| CACGGTGACATGTTGGGCAA+CGG | - | chr1.4:44087234-44087253 | None:intergenic | 55.0% | |
| CCAGCATAGGGGCAACTGTA+TGG | - | chr1.4:44087397-44087416 | None:intergenic | 55.0% | |
| CCATACAGTTGCCCCTATGC+TGG | + | chr1.4:44087394-44087413 | MS.gene96493:CDS | 55.0% | |
| CCCAGCCCCCAAACATTATG+AGG | + | chr1.4:44086635-44086654 | MS.gene96493:intron | 55.0% | |
| GCCTCATAATGTTTGGGGGC+TGG | - | chr1.4:44086639-44086658 | None:intergenic | 55.0% | |
| TGACTCTCGCGAATGCTCCT+TGG | - | chr1.4:44088133-44088152 | None:intergenic | 55.0% | |
| TGTTTGGCCCCACCCAACAA+AGG | - | chr1.4:44086741-44086760 | None:intergenic | 55.0% | |
| ! | GCCGAGTTTTTGTGACCGTC+AGG | + | chr1.4:44086970-44086989 | MS.gene96493:intron | 55.0% |
| !! | TCGTTGGCCTTTGTTGGGTG+GGG | + | chr1.4:44086731-44086750 | MS.gene96493:intron | 55.0% |
| !!! | AGGCCTGGTGTTTTTCAGGC+TGG | - | chr1.4:44086881-44086900 | None:intergenic | 55.0% |
| !!! | GGCCTGGTGTTTTTCAGGCT+GGG | - | chr1.4:44086880-44086899 | None:intergenic | 55.0% |
| GCTCTCCGAAACAGCGACAC+AGG | + | chr1.4:44085965-44085984 | MS.gene96493:intron | 60.0% | |
| TGGGCCGGATGGTCTCATTG+CGG | + | chr1.4:44086847-44086866 | MS.gene96493:intron | 60.0% | |
| GGGGCCGCAATGAGACCATC+CGG | - | chr1.4:44086854-44086873 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 44085409 | 44088276 | 44085409 | ID=MS.gene96493 |
| chr1.4 | mRNA | 44085409 | 44088276 | 44085409 | ID=MS.gene96493.t1;Parent=MS.gene96493 |
| chr1.4 | exon | 44085409 | 44085630 | 44085409 | ID=MS.gene96493.t1.exon1;Parent=MS.gene96493.t1 |
| chr1.4 | CDS | 44085409 | 44085630 | 44085409 | ID=cds.MS.gene96493.t1;Parent=MS.gene96493.t1 |
| chr1.4 | exon | 44087181 | 44087567 | 44087181 | ID=MS.gene96493.t1.exon2;Parent=MS.gene96493.t1 |
| chr1.4 | CDS | 44087181 | 44087567 | 44087181 | ID=cds.MS.gene96493.t1;Parent=MS.gene96493.t1 |
| chr1.4 | exon | 44087956 | 44088276 | 44087956 | ID=MS.gene96493.t1.exon3;Parent=MS.gene96493.t1 |
| chr1.4 | CDS | 44087956 | 44088276 | 44087956 | ID=cds.MS.gene96493.t1;Parent=MS.gene96493.t1 |
| Gene Sequence |
| Protein sequence |
