Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36292.t1 | XP_003597775.2 | 98.3 | 1004 | 17 | 0 | 1 | 1004 | 1 | 1004 | 0.00E+00 | 1974.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36292.t1 | F4HQE2 | 52.9 | 1023 | 418 | 13 | 1 | 1000 | 46 | 1027 | 2.0e-295 | 1016.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36292.t1 | G7II45 | 98.3 | 1004 | 17 | 0 | 1 | 1004 | 1 | 1004 | 0.0e+00 | 1974.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049243 | MS.gene36292 | 0.805517 | 1.28E-49 | -1.69E-46 |
MS.gene049989 | MS.gene36292 | 0.857169 | 1.96E-62 | -1.69E-46 |
MS.gene050297 | MS.gene36292 | 0.859871 | 3.06E-63 | -1.69E-46 |
MS.gene050648 | MS.gene36292 | 0.817557 | 3.10E-52 | -1.69E-46 |
MS.gene051263 | MS.gene36292 | 0.814009 | 1.92E-51 | -1.69E-46 |
MS.gene051629 | MS.gene36292 | 0.805013 | 1.64E-49 | -1.69E-46 |
MS.gene051698 | MS.gene36292 | 0.830204 | 3.35E-55 | -1.69E-46 |
MS.gene052367 | MS.gene36292 | 0.803438 | 3.49E-49 | -1.69E-46 |
MS.gene053416 | MS.gene36292 | 0.812156 | 4.89E-51 | -1.69E-46 |
MS.gene053417 | MS.gene36292 | 0.808701 | 2.72E-50 | -1.69E-46 |
MS.gene053929 | MS.gene36292 | 0.80007 | 1.71E-48 | -1.69E-46 |
MS.gene058197 | MS.gene36292 | 0.810087 | 1.37E-50 | -1.69E-46 |
MS.gene058198 | MS.gene36292 | 0.807336 | 5.31E-50 | -1.69E-46 |
MS.gene059300 | MS.gene36292 | 0.815163 | 1.06E-51 | -1.69E-46 |
MS.gene060565 | MS.gene36292 | 0.800418 | 1.45E-48 | -1.69E-46 |
MS.gene06057 | MS.gene36292 | 0.81948 | 1.14E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene36292 | MS.gene055974 | PPI |
MS.gene36292 | MS.gene96493 | PPI |
MS.gene36292 | MS.gene52683 | PPI |
MS.gene36292 | MS.gene018013 | PPI |
MS.gene36292 | MS.gene89612 | PPI |
MS.gene36292 | MS.gene50517 | PPI |
MS.gene36292 | MS.gene012049 | PPI |
MS.gene36292 | MS.gene012051 | PPI |
MS.gene36292 | MS.gene98989 | PPI |
MS.gene36292 | MS.gene012053 | PPI |
MS.gene36292 | MS.gene39144 | PPI |
MS.gene36292 | MS.gene071737 | PPI |
MS.gene36292 | MS.gene02480 | PPI |
MS.gene36292 | MS.gene034570 | PPI |
MS.gene36292 | MS.gene04647 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36292.t1 | MTR_2g102150 | 98.307 | 1004 | 17 | 0 | 1 | 1004 | 1 | 1004 | 0.0 | 2051 |
MS.gene36292.t1 | MTR_1g026490 | 34.496 | 774 | 427 | 20 | 4 | 724 | 17 | 763 | 5.94e-114 | 380 |
MS.gene36292.t1 | MTR_2g084735 | 24.456 | 781 | 427 | 27 | 4 | 702 | 3 | 702 | 3.25e-50 | 191 |
MS.gene36292.t1 | MTR_0147s0060 | 31.361 | 338 | 176 | 8 | 434 | 723 | 575 | 904 | 1.21e-41 | 166 |
MS.gene36292.t1 | MTR_0147s0060 | 32.961 | 179 | 88 | 3 | 97 | 248 | 199 | 372 | 5.99e-21 | 99.8 |
MS.gene36292.t1 | MTR_2g084735 | 28.920 | 287 | 188 | 6 | 416 | 702 | 518 | 788 | 8.67e-31 | 131 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36292.t1 | AT1G79950 | 53.107 | 1030 | 409 | 16 | 1 | 1002 | 46 | 1029 | 0.0 | 1058 |
MS.gene36292.t1 | AT1G79950 | 52.718 | 1030 | 395 | 16 | 1 | 1002 | 46 | 1011 | 0.0 | 1050 |
MS.gene36292.t1 | AT1G79950 | 62.850 | 751 | 260 | 5 | 1 | 739 | 46 | 789 | 0.0 | 994 |
MS.gene36292.t1 | AT1G79950 | 62.850 | 751 | 260 | 5 | 1 | 739 | 46 | 789 | 0.0 | 994 |
MS.gene36292.t1 | AT1G79950 | 62.850 | 751 | 260 | 5 | 1 | 739 | 46 | 789 | 0.0 | 994 |
MS.gene36292.t1 | AT1G79950 | 63.102 | 748 | 256 | 6 | 1 | 736 | 46 | 785 | 0.0 | 994 |
MS.gene36292.t1 | AT1G79950 | 63.102 | 748 | 256 | 6 | 1 | 736 | 46 | 785 | 0.0 | 994 |
MS.gene36292.t1 | AT1G20720 | 34.414 | 802 | 416 | 23 | 3 | 729 | 26 | 792 | 9.15e-128 | 417 |
MS.gene36292.t1 | AT1G20720 | 34.457 | 801 | 415 | 23 | 4 | 729 | 27 | 792 | 4.15e-127 | 417 |
MS.gene36292.t1 | AT1G20750 | 33.974 | 780 | 386 | 24 | 4 | 729 | 27 | 731 | 2.42e-109 | 366 |
MS.gene36292.t1 | AT1G79890 | 30.769 | 325 | 176 | 8 | 434 | 719 | 306 | 620 | 6.87e-39 | 154 |
MS.gene36292.t1 | AT1G79890 | 43.284 | 67 | 38 | 0 | 182 | 248 | 43 | 109 | 5.72e-12 | 70.1 |
MS.gene36292.t1 | AT1G79890 | 30.769 | 325 | 176 | 8 | 434 | 719 | 402 | 716 | 1.91e-38 | 154 |
MS.gene36292.t1 | AT1G79890 | 30.769 | 325 | 176 | 8 | 434 | 719 | 555 | 869 | 2.64e-38 | 155 |
MS.gene36292.t1 | AT1G79890 | 32.184 | 174 | 96 | 3 | 97 | 248 | 185 | 358 | 7.80e-20 | 95.9 |
MS.gene36292.t1 | AT1G03190 | 30.769 | 286 | 182 | 5 | 417 | 702 | 433 | 702 | 4.67e-32 | 134 |
MS.gene36292.t1 | AT1G03190 | 28.315 | 279 | 142 | 10 | 4 | 257 | 3 | 248 | 3.22e-20 | 97.1 |
MS.gene36292.t1 | AT1G03190 | 30.769 | 286 | 182 | 5 | 417 | 702 | 433 | 702 | 4.67e-32 | 134 |
MS.gene36292.t1 | AT1G03190 | 28.315 | 279 | 142 | 10 | 4 | 257 | 3 | 248 | 3.22e-20 | 97.1 |
MS.gene36292.t1 | AT1G79890 | 30.943 | 265 | 143 | 6 | 434 | 668 | 555 | 809 | 1.19e-28 | 124 |
MS.gene36292.t1 | AT1G79890 | 32.184 | 174 | 96 | 3 | 97 | 248 | 185 | 358 | 5.86e-20 | 96.3 |
Find 222 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCCTTTGACCTGCCTTCT+TGG | 0.073621 | 2.2:+1703516 | MS.gene36292:CDS |
TAAGATTTAGCTCACCTTTA+AGG | 0.092977 | 2.2:-1703643 | None:intergenic |
TCCATCATCAGAGCACTTTA+TGG | 0.163178 | 2.2:+1709379 | MS.gene36292:CDS |
CTTCCCATCTTATTACCTTT+TGG | 0.171305 | 2.2:+1706136 | MS.gene36292:CDS |
TATTTCTCCTTTCTATTAAA+AGG | 0.198738 | 2.2:-1703580 | None:intergenic |
TTCGCTAATCTTCAATGTTT+TGG | 0.223726 | 2.2:-1710527 | None:intergenic |
GTTGTACCTGTTGGTCCTTT+AGG | 0.229959 | 2.2:+1705296 | MS.gene36292:CDS |
TTGTACCTGTTGGTCCTTTA+GGG | 0.253981 | 2.2:+1705297 | MS.gene36292:CDS |
CATTCCTCATTCAGGGAATC+TGG | 0.261605 | 2.2:+1709349 | MS.gene36292:intron |
AATCATTTCAATCAAGTTCT+TGG | 0.262305 | 2.2:+1701848 | MS.gene36292:CDS |
TGCTATAAATCTACGCTTCT+TGG | 0.271153 | 2.2:-1709810 | None:intergenic |
AATTTCCAATATGTTGCTTT+AGG | 0.275133 | 2.2:-1709844 | None:intergenic |
TTTAGCCTGGCGGAAGAGTT+TGG | 0.279946 | 2.2:+1701170 | MS.gene36292:CDS |
GAAAGGCTCTGCAAATTTCT+TGG | 0.282770 | 2.2:+1703208 | MS.gene36292:CDS |
GATTCCCTAGGTTCTATTAC+AGG | 0.295544 | 2.2:-1706309 | None:intergenic |
ATCGAGGATTTGGTCAATAT+TGG | 0.298594 | 2.2:+1702985 | MS.gene36292:CDS |
TTGCAGTGTTACTCAAGATT+TGG | 0.303013 | 2.2:+1708067 | MS.gene36292:intron |
ACTCCAGCCCATATCTGATT+TGG | 0.306758 | 2.2:-1705275 | None:intergenic |
GTAATGATAATTCATCAATA+TGG | 0.307317 | 2.2:+1706262 | MS.gene36292:CDS |
TTTGGCTGGTAGTTCTCAAC+TGG | 0.307704 | 2.2:+1709748 | MS.gene36292:CDS |
GTCAATATTGGCAAAACATC+CGG | 0.311110 | 2.2:+1702997 | MS.gene36292:CDS |
GGTAGAGCTGTGGTAGTTAC+TGG | 0.311931 | 2.2:+1706901 | MS.gene36292:CDS |
TTGGAAAATCCACATGTAAT+AGG | 0.320163 | 2.2:+1705251 | MS.gene36292:CDS |
GCCAATCCCAAGTCTCAAAA+TGG | 0.325879 | 2.2:+1707962 | MS.gene36292:CDS |
CTGGGAATCATAGGCTTCAT+AGG | 0.330426 | 2.2:-1700281 | None:intergenic |
ATTCGCCATCGCCATGACTA+TGG | 0.340959 | 2.2:+1707373 | MS.gene36292:CDS |
GCCTATGGATATCGAGGATT+TGG | 0.342469 | 2.2:+1702975 | MS.gene36292:CDS |
AGAACATGGCGGGTTTGATT+TGG | 0.342496 | 2.2:+1709730 | MS.gene36292:CDS |
TAATAGGCCCAAATCAGATA+TGG | 0.345316 | 2.2:+1705267 | MS.gene36292:CDS |
TTGAAGCAAAATCCCAATCT+TGG | 0.347622 | 2.2:+1702946 | MS.gene36292:CDS |
AGAGGCTACCTCTCCTAAAA+AGG | 0.348921 | 2.2:+1710587 | MS.gene36292:CDS |
CATAGGCTCTTCTCCAAGAT+TGG | 0.349649 | 2.2:-1702959 | None:intergenic |
AAATTTGACTCGAATTGTTC+CGG | 0.359310 | 2.2:+1706097 | MS.gene36292:CDS |
AATGTTTACCTCATCAATTA+AGG | 0.361886 | 2.2:+1706335 | MS.gene36292:CDS |
TGTGAAGGAGGCGGAGGCTT+GGG | 0.362656 | 2.2:+1704334 | MS.gene36292:CDS |
AATTCTTCCAAAGCTATTCC+TGG | 0.364661 | 2.2:-1705040 | None:intergenic |
TCATTATTAGAAGCTGAAAA+TGG | 0.382540 | 2.2:+1708154 | MS.gene36292:CDS |
TCACAGCTCTGGAGGCTTGT+TGG | 0.386535 | 2.2:-1707330 | None:intergenic |
TCATCGTCACAGTCAGAGCC+TGG | 0.387509 | 2.2:+1701249 | MS.gene36292:CDS |
CATATTGAATCCAAGGAGTT+GGG | 0.389616 | 2.2:+1703941 | MS.gene36292:CDS |
GAAGCTTTCAAAGTGCAGTT+TGG | 0.400235 | 2.2:-1709545 | None:intergenic |
TTGCTTCGCACGCCTTCGAC+AGG | 0.401810 | 2.2:-1701813 | None:intergenic |
TATGACCTAAAGCAACATAT+TGG | 0.405427 | 2.2:+1709839 | MS.gene36292:CDS |
CTGAACGATACCACTGCATC+TGG | 0.405882 | 2.2:+1706466 | MS.gene36292:CDS |
TTAGCCTGGCGGAAGAGTTT+GGG | 0.406054 | 2.2:+1701171 | MS.gene36292:CDS |
CTCCAGCCCATATCTGATTT+GGG | 0.408400 | 2.2:-1705274 | None:intergenic |
TTGTATGAACAATATGTTGA+AGG | 0.409221 | 2.2:+1711339 | MS.gene36292:CDS |
TTAAGGATAGCAAAATCATC+TGG | 0.412226 | 2.2:-1703626 | None:intergenic |
GAGTACTTGGATCAACAATC+TGG | 0.414333 | 2.2:+1707171 | MS.gene36292:CDS |
GAGTTGGGGTTCACCAAACC+TGG | 0.415598 | 2.2:+1703956 | MS.gene36292:CDS |
AGCAAGGAATGCTGATCCTT+GGG | 0.420774 | 2.2:-1710099 | None:intergenic |
AGTTGAAACGGACATCTTAC+AGG | 0.421915 | 2.2:+1701340 | MS.gene36292:CDS |
GTAAACGAGCTGGGAATCAT+AGG | 0.422780 | 2.2:-1700290 | None:intergenic |
CTTTAATCCAGGAATAGCTT+TGG | 0.423217 | 2.2:+1705033 | MS.gene36292:CDS |
TGCAGAATATATAGACTTTG+TGG | 0.423474 | 2.2:+1710483 | MS.gene36292:CDS |
TGCAGTGGTATCGTTCAGTT+TGG | 0.424197 | 2.2:-1706461 | None:intergenic |
TCGTTTAAAACGTGAGTACT+TGG | 0.426788 | 2.2:+1707158 | MS.gene36292:CDS |
GAGCAAGGAATGCTGATCCT+TGG | 0.430026 | 2.2:-1710100 | None:intergenic |
CAGACCTAAAATGACCGTTC+TGG | 0.432557 | 2.2:+1701712 | MS.gene36292:intron |
TCCGACCATAGGATGTTTGT+AGG | 0.435372 | 2.2:+1709644 | MS.gene36292:CDS |
TCTCCTGACTATCTTCTTCG+AGG | 0.443040 | 2.2:-1704069 | None:intergenic |
TTGGAGAGTCCCACAGGAAC+TGG | 0.443063 | 2.2:+1701120 | MS.gene36292:CDS |
ATGTGAAGGAGGCGGAGGCT+TGG | 0.444842 | 2.2:+1704333 | MS.gene36292:CDS |
TGATTCCCAGCTCGTTTACA+TGG | 0.445586 | 2.2:+1700294 | MS.gene36292:CDS |
TGGGCTGCCAATGGTTCTAT+AGG | 0.446258 | 2.2:+1704353 | MS.gene36292:CDS |
TTCTATGTGCTACTTTAGCC+TGG | 0.447410 | 2.2:+1701157 | MS.gene36292:CDS |
AACAGCTTGATTCACAGCTC+TGG | 0.449253 | 2.2:-1707341 | None:intergenic |
AGACCTAAAATGACCGTTCT+GGG | 0.449864 | 2.2:+1701713 | MS.gene36292:intron |
AACTTACAATTTCAGTTCCT+CGG | 0.452949 | 2.2:-1705128 | None:intergenic |
TTGGAAGAATTTGCCAAGGA+TGG | 0.453822 | 2.2:+1705052 | MS.gene36292:CDS |
ATAGGCTCTTCTCCAAGATT+GGG | 0.455077 | 2.2:-1702958 | None:intergenic |
TCTTATGCTCAACAGGTTCA+AGG | 0.456622 | 2.2:+1711290 | MS.gene36292:intron |
AACTAGCAACATCTGCAGAT+TGG | 0.458183 | 2.2:+1704096 | MS.gene36292:CDS |
CGTATCACGAGTGCGGTAAG+AGG | 0.462842 | 2.2:-1705333 | None:intergenic |
TTTGGTGAACCCCAACTCCT+TGG | 0.463008 | 2.2:-1703951 | None:intergenic |
TGGAGCAAAGCATTGGGTGC+TGG | 0.464354 | 2.2:+1706156 | MS.gene36292:CDS |
TCTCCTCGAAGAAGATAGTC+AGG | 0.475033 | 2.2:+1704066 | MS.gene36292:CDS |
TGGAAGAATTTGCCAAGGAT+GGG | 0.475670 | 2.2:+1705053 | MS.gene36292:CDS |
ACCCAATGCTTTGCTCCAAA+AGG | 0.477346 | 2.2:-1706151 | None:intergenic |
AAAGTGCAGTTTGGATCCAC+TGG | 0.479285 | 2.2:-1709536 | None:intergenic |
TTTAGGAGAGGTAGCCTCTC+GGG | 0.479689 | 2.2:-1710583 | None:intergenic |
GCAGAATATATAGACTTTGT+GGG | 0.480088 | 2.2:+1710484 | MS.gene36292:CDS |
CTTTGCTGTTTGTCGTGGGA+AGG | 0.480947 | 2.2:+1706498 | MS.gene36292:CDS |
CACTACCTACAAACATCCTA+TGG | 0.482347 | 2.2:-1709649 | None:intergenic |
AGTTTGGGCAGTTTCTCAAC+CGG | 0.482462 | 2.2:+1701186 | MS.gene36292:CDS |
GTGTCAGAGACTTCCCCATT+CGG | 0.483142 | 2.2:+1705228 | MS.gene36292:intron |
CATCTTTGTCTTCCGACCAT+AGG | 0.483668 | 2.2:+1709633 | MS.gene36292:CDS |
TAATGATAATTCATCAATAT+GGG | 0.484998 | 2.2:+1706263 | MS.gene36292:CDS |
GACAAAGATGAGCGATTGGC+AGG | 0.486963 | 2.2:-1709620 | None:intergenic |
AGATCAATTATATTGACATC+AGG | 0.487682 | 2.2:+1705079 | MS.gene36292:CDS |
AGCTCCTTTGCTAAATGATA+AGG | 0.488599 | 2.2:-1703126 | None:intergenic |
CTACGCTTCTTGGTGATACA+AGG | 0.494122 | 2.2:-1709800 | None:intergenic |
GTACGCCCTAAAGGACCAAC+AGG | 0.496723 | 2.2:-1705302 | None:intergenic |
CAATCTTGGAGAAGAGCCTA+TGG | 0.498701 | 2.2:+1702960 | MS.gene36292:CDS |
GCGGAGGCTTGGGCTGCCAA+TGG | 0.499293 | 2.2:+1704344 | MS.gene36292:CDS |
CATCGTCACAGTCAGAGCCT+GGG | 0.499628 | 2.2:+1701250 | MS.gene36292:CDS |
GGCCCAAATCAGATATGGGC+TGG | 0.499726 | 2.2:+1705272 | MS.gene36292:CDS |
TGCTCCAAAAGGTAATAAGA+TGG | 0.499745 | 2.2:-1706140 | None:intergenic |
GCAGGAATCTAATGCACTGT+TGG | 0.499753 | 2.2:+1701101 | MS.gene36292:intron |
TCTAATGAGCAATCATCGTC+AGG | 0.502200 | 2.2:+1709866 | MS.gene36292:CDS |
GGGCCACACTTCATTCATGC+AGG | 0.505852 | 2.2:+1709589 | MS.gene36292:CDS |
GCATATTGAATCCAAGGAGT+TGG | 0.505967 | 2.2:+1703940 | MS.gene36292:CDS |
ATGGAGTACAAGCAGGAGCT+TGG | 0.506354 | 2.2:+1705356 | MS.gene36292:CDS |
AGTGACGATACTCTTAAGCT+TGG | 0.506605 | 2.2:-1704032 | None:intergenic |
CTCAAGATTTCTACTTTGAG+AGG | 0.509043 | 2.2:-1710021 | None:intergenic |
CCTTGTCCATGTAAACGAGC+TGG | 0.511426 | 2.2:-1700300 | None:intergenic |
GAGTTAAAAGTACGCCCTAA+AGG | 0.511896 | 2.2:-1705311 | None:intergenic |
CATGGCGGGTTTGATTTGGC+TGG | 0.512062 | 2.2:+1709734 | MS.gene36292:CDS |
GGCACAAGGAGGGTCGTTCA+AGG | 0.512553 | 2.2:+1707194 | MS.gene36292:CDS |
AAGTAATTCAAGAGTTGAAA+CGG | 0.514762 | 2.2:+1701328 | MS.gene36292:CDS |
AGCTGGTGGTGCTTTAATCC+AGG | 0.515173 | 2.2:+1705022 | MS.gene36292:CDS |
AATTGATCTAACCCCATCCT+TGG | 0.516304 | 2.2:-1705065 | None:intergenic |
TCTAACAGCTTGCATTTCTG+AGG | 0.518825 | 2.2:+1703541 | MS.gene36292:CDS |
TCCATAAAGTGCTCTGATGA+TGG | 0.518862 | 2.2:-1709380 | None:intergenic |
CTGCAGCACTGAGTTTATCT+CGG | 0.519399 | 2.2:-1710465 | None:intergenic |
CTTTATGGACAAATTTCACA+TGG | 0.520522 | 2.2:+1709394 | MS.gene36292:CDS |
AGGATCAGCATTCCTTGCTC+AGG | 0.523824 | 2.2:+1710103 | MS.gene36292:CDS |
CAAGCTGTTAGAAGCCAAGA+AGG | 0.524674 | 2.2:-1703530 | None:intergenic |
GTGACGATACTCTTAAGCTT+GGG | 0.528799 | 2.2:-1704031 | None:intergenic |
AAAACTACCTATAGAACCAT+TGG | 0.530664 | 2.2:-1704360 | None:intergenic |
TGCCACAGTCACTGATCCTA+AGG | 0.531249 | 2.2:+1706933 | MS.gene36292:CDS |
CAGGAGCTTGGAAATGCAAT+CGG | 0.532518 | 2.2:+1705368 | MS.gene36292:CDS |
CAGAGACTTCCCCATTCGGT+TGG | 0.533101 | 2.2:+1705232 | MS.gene36292:intron |
CTGTTAGAAGCCAAGAAGGC+AGG | 0.533693 | 2.2:-1703526 | None:intergenic |
AATAGGCCCAAATCAGATAT+GGG | 0.533735 | 2.2:+1705268 | MS.gene36292:CDS |
TGCTGTCGCAAGAACATGGC+GGG | 0.534628 | 2.2:+1709720 | MS.gene36292:CDS |
CTGCAGATTGGAAACTATGA+AGG | 0.535410 | 2.2:+1704108 | MS.gene36292:CDS |
ATTCCTCATTCAGGGAATCT+GGG | 0.537306 | 2.2:+1709350 | MS.gene36292:intron |
GATGAAGTGAAGTTACTTCG+TGG | 0.537764 | 2.2:+1701761 | MS.gene36292:CDS |
AGAGCTGTGAATCAAGCTGT+TGG | 0.538267 | 2.2:+1707343 | MS.gene36292:CDS |
GATTCAACACCTACTTCTGA+TGG | 0.538593 | 2.2:+1710074 | MS.gene36292:CDS |
CATTGGGTGCTGGAAAAGCT+TGG | 0.539774 | 2.2:+1706166 | MS.gene36292:CDS |
GGAAGAATTTGCCAAGGATG+GGG | 0.539850 | 2.2:+1705054 | MS.gene36292:CDS |
TGATTTGGGCCTATTACATG+TGG | 0.540052 | 2.2:-1705260 | None:intergenic |
TACAATGGTAGGAAACTTTG+AGG | 0.542709 | 2.2:-1701274 | None:intergenic |
AGTACTTGGATCAACAATCT+GGG | 0.545269 | 2.2:+1707172 | MS.gene36292:CDS |
CGTGAAGCATATACAATGGT+AGG | 0.545819 | 2.2:-1701285 | None:intergenic |
CGATCAATAAGATAGTTGTA+TGG | 0.547860 | 2.2:-1703177 | None:intergenic |
GCACTGTTGGAGAGTCCCAC+AGG | 0.548865 | 2.2:+1701114 | MS.gene36292:CDS |
AGGTGTCAAGGACACTCAGC+TGG | 0.549179 | 2.2:+1705005 | MS.gene36292:CDS |
TTGACTCGAATTGTTCCGGA+TGG | 0.550682 | 2.2:+1706101 | MS.gene36292:CDS |
GTAGGAAACTTTGAGGCCCC+AGG | 0.551895 | 2.2:-1701267 | None:intergenic |
AAGAAGCGTAGATTTATAGC+AGG | 0.553378 | 2.2:+1709812 | MS.gene36292:CDS |
TTTCGAGATGGACGAACTCG+AGG | 0.553492 | 2.2:+1708118 | MS.gene36292:CDS |
AAGAATACAAGAAGTCCATC+CGG | 0.556621 | 2.2:-1706116 | None:intergenic |
GCTCCAAAAGGTAATAAGAT+GGG | 0.557503 | 2.2:-1706139 | None:intergenic |
TCAATATTGGCAAAACATCC+GGG | 0.561993 | 2.2:+1702998 | MS.gene36292:CDS |
GGATCAGTGACTGTGGCATA+CGG | 0.566196 | 2.2:-1706928 | None:intergenic |
CAGTTTGGATCCACTGGTGT+AGG | 0.566854 | 2.2:-1709530 | None:intergenic |
CCTTGGGTTCCATCAGAAGT+AGG | 0.567538 | 2.2:-1710083 | None:intergenic |
GATCAACAATCTGGGGCACA+AGG | 0.568498 | 2.2:+1707180 | MS.gene36292:CDS |
CTTGTCCATGTAAACGAGCT+GGG | 0.569634 | 2.2:-1700299 | None:intergenic |
AACAATCTGGGGCACAAGGA+GGG | 0.570620 | 2.2:+1707184 | MS.gene36292:CDS |
AAAACCTGTAATAGAACCTA+GGG | 0.570641 | 2.2:+1706305 | MS.gene36292:CDS |
TACAACTATCTTATTGATCG+AGG | 0.572717 | 2.2:+1703180 | MS.gene36292:CDS |
ATGGATACAGCCTCACATCA+AGG | 0.573909 | 2.2:+1707981 | MS.gene36292:CDS |
CTTGTCGATTTGCCTGTCGA+AGG | 0.575502 | 2.2:+1701801 | MS.gene36292:CDS |
GGAAGACAAAGATGAGCGAT+TGG | 0.576277 | 2.2:-1709624 | None:intergenic |
TGGGAATCATAGGCTTCATA+GGG | 0.577400 | 2.2:-1700280 | None:intergenic |
GTAAACATTGAAGATTCCCT+AGG | 0.577449 | 2.2:-1706321 | None:intergenic |
AAGCCAAGAAGGCAGGTCAA+AGG | 0.577591 | 2.2:-1703519 | None:intergenic |
ATGTTGCAGGCAAGGTGTCA+AGG | 0.577686 | 2.2:+1704993 | MS.gene36292:intron |
ACTGCCCAAACTCTTCCGCC+AGG | 0.579419 | 2.2:-1701175 | None:intergenic |
TGAGGTGCATATTGAATCCA+AGG | 0.580362 | 2.2:+1703934 | MS.gene36292:CDS |
ATTATTTAACAGGTTAGCGA+AGG | 0.581069 | 2.2:+1706856 | MS.gene36292:intron |
AGCTTGATTCACAGCTCTGG+AGG | 0.581906 | 2.2:-1707338 | None:intergenic |
TACTTGACGTATCTGACTGT+GGG | 0.583832 | 2.2:-1701310 | None:intergenic |
TGAACAATATGTTGAAGGAA+AGG | 0.584868 | 2.2:+1711344 | MS.gene36292:CDS |
ATAATTCATCAATATGGGAG+AGG | 0.588774 | 2.2:+1706268 | MS.gene36292:CDS |
GGTTCATGTGAAGGAGGCGG+AGG | 0.589354 | 2.2:+1704328 | MS.gene36292:intron |
ACTGTGCTGTCGCAAGAACA+TGG | 0.591054 | 2.2:+1709716 | MS.gene36292:CDS |
ATAGCTAGTCAAAATGCTCA+AGG | 0.592653 | 2.2:+1709966 | MS.gene36292:intron |
AGCTTTGGAAGAATTTGCCA+AGG | 0.593924 | 2.2:+1705048 | MS.gene36292:CDS |
AAATAATTGCTCCATAGTCA+TGG | 0.594023 | 2.2:-1707384 | None:intergenic |
CCAGCTCGTTTACATGGACA+AGG | 0.597118 | 2.2:+1700300 | MS.gene36292:CDS |
CCAAGAAGGCAGGTCAAAGG+AGG | 0.599444 | 2.2:-1703516 | None:intergenic |
TATTGATCGAGGGAAAAGAA+AGG | 0.604124 | 2.2:+1703191 | MS.gene36292:CDS |
ACCTACAAACATCCTATGGT+CGG | 0.604699 | 2.2:-1709645 | None:intergenic |
CAACAATCTGGGGCACAAGG+AGG | 0.604794 | 2.2:+1707183 | MS.gene36292:CDS |
ATATTATATCAACAGCCTTG+TGG | 0.609338 | 2.2:-1703149 | None:intergenic |
TGGGCTGGAGTTGTACCTGT+TGG | 0.611675 | 2.2:+1705287 | MS.gene36292:CDS |
ACAACTATCTTATTGATCGA+GGG | 0.614427 | 2.2:+1703181 | MS.gene36292:CDS |
GAGACTTGGGATTGGCGATG+AGG | 0.615009 | 2.2:-1707955 | None:intergenic |
TGATACGATGGAGTACAAGC+AGG | 0.615022 | 2.2:+1705349 | MS.gene36292:CDS |
ACAGGTTCATGTGAAGGAGG+CGG | 0.617294 | 2.2:+1704325 | MS.gene36292:intron |
AGAAGAGCCTATGGATATCG+AGG | 0.617460 | 2.2:+1702969 | MS.gene36292:CDS |
ATTTGACGAAGCTCACAACC+TGG | 0.619370 | 2.2:+1703248 | MS.gene36292:CDS |
ACCAAATCCTCGATATCCAT+AGG | 0.621202 | 2.2:-1702976 | None:intergenic |
GAAAACAGCTCCAGATGCAG+TGG | 0.621443 | 2.2:-1706476 | None:intergenic |
ATATTGAATCCAAGGAGTTG+GGG | 0.622193 | 2.2:+1703942 | MS.gene36292:CDS |
TAATCATACCTTAATTGATG+AGG | 0.623130 | 2.2:-1706343 | None:intergenic |
TTGCTCCATAGTCATGGCGA+TGG | 0.623651 | 2.2:-1707378 | None:intergenic |
ATCGTCACAGTCAGAGCCTG+GGG | 0.625573 | 2.2:+1701251 | MS.gene36292:CDS |
CCTACTTCTGATGGAACCCA+AGG | 0.629812 | 2.2:+1710083 | MS.gene36292:CDS |
GGCCACACTTCATTCATGCA+GGG | 0.631738 | 2.2:+1709590 | MS.gene36292:CDS |
GTACATGCAGCCTACACCAG+TGG | 0.632422 | 2.2:+1709520 | MS.gene36292:intron |
TTGGCTGGTAGTTCTCAACT+GGG | 0.639905 | 2.2:+1709749 | MS.gene36292:CDS |
GGTCATGCAATCTCTTCAAG+AGG | 0.640444 | 2.2:+1700321 | MS.gene36292:CDS |
ATTCCTCTGATCTTGTACGT+CGG | 0.640618 | 2.2:-1700244 | None:intergenic |
TTACTTGACGTATCTGACTG+TGG | 0.641325 | 2.2:-1701311 | None:intergenic |
GTGTCCTTATCATTTAGCAA+AGG | 0.645142 | 2.2:+1703122 | MS.gene36292:CDS |
ATGCCGACGTACAAGATCAG+AGG | 0.652078 | 2.2:+1700241 | MS.gene36292:CDS |
TTACCGCACTCGTGATACGA+TGG | 0.652538 | 2.2:+1705337 | MS.gene36292:CDS |
AAAACAGGTTCATGTGAAGG+AGG | 0.653336 | 2.2:+1704322 | MS.gene36292:intron |
TCCTCGGCAAAAGAGTCTAG+AGG | 0.655667 | 2.2:-1705112 | None:intergenic |
TGTCAAGGACACTCAGCTGG+TGG | 0.658313 | 2.2:+1705008 | MS.gene36292:CDS |
CAAACTAGCACCTTGATGTG+AGG | 0.660811 | 2.2:-1707991 | None:intergenic |
ACTTGAAAAGCGTATTGCTG+AGG | 0.665212 | 2.2:+1703916 | MS.gene36292:CDS |
TTGTTCACGAGAACCCAGAA+CGG | 0.670694 | 2.2:-1701726 | None:intergenic |
AGTTGGGGTTCACCAAACCT+GGG | 0.676738 | 2.2:+1703957 | MS.gene36292:CDS |
TTTAGCAAAGGAGCTCCACA+AGG | 0.678361 | 2.2:+1703134 | MS.gene36292:CDS |
AGATCATGCAGGTAGAGCTG+TGG | 0.683689 | 2.2:+1706891 | MS.gene36292:CDS |
AACCTTAGGATCAGTGACTG+TGG | 0.684557 | 2.2:-1706935 | None:intergenic |
CGGTGATAAAGGTAAAACTG+AGG | 0.698997 | 2.2:+1701224 | MS.gene36292:CDS |
TATGTGCTACTTTAGCCTGG+CGG | 0.703167 | 2.2:+1701160 | MS.gene36292:CDS |
CTCCCTGCATGAATGAAGTG+TGG | 0.714336 | 2.2:-1709592 | None:intergenic |
GTACTTGGATCAACAATCTG+GGG | 0.720348 | 2.2:+1707173 | MS.gene36292:CDS |
TTATTAGAAGCTGAAAATGG+CGG | 0.720450 | 2.2:+1708157 | MS.gene36292:CDS |
AAGTTCAAGTGATACACGCG+AGG | 0.722707 | 2.2:+1709673 | MS.gene36292:CDS |
ACTCCATCGTATCACGAGTG+CGG | 0.723139 | 2.2:-1705340 | None:intergenic |
GTGCTGTCGCAAGAACATGG+CGG | 0.767468 | 2.2:+1709719 | MS.gene36292:CDS |
GGTGCGTGAAGCATATACAA+TGG | 0.780238 | 2.2:-1701289 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 1700241 | 1711374 | 1700241 | ID=MS.gene36292 |
chr2.2 | mRNA | 1700241 | 1711374 | 1700241 | ID=MS.gene36292.t1;Parent=MS.gene36292 |
chr2.2 | exon | 1700241 | 1700342 | 1700241 | ID=MS.gene36292.t1.exon1;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1700241 | 1700342 | 1700241 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1701105 | 1701361 | 1701105 | ID=MS.gene36292.t1.exon2;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1701105 | 1701361 | 1701105 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1701715 | 1701869 | 1701715 | ID=MS.gene36292.t1.exon3;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1701715 | 1701869 | 1701715 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1702941 | 1703022 | 1702941 | ID=MS.gene36292.t1.exon4;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1702941 | 1703022 | 1702941 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1703122 | 1703269 | 1703122 | ID=MS.gene36292.t1.exon5;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1703122 | 1703269 | 1703122 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1703494 | 1703650 | 1703494 | ID=MS.gene36292.t1.exon6;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1703494 | 1703650 | 1703494 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1703903 | 1704186 | 1703903 | ID=MS.gene36292.t1.exon7;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1703903 | 1704186 | 1703903 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1704329 | 1704374 | 1704329 | ID=MS.gene36292.t1.exon8;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1704329 | 1704374 | 1704329 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1705002 | 1705143 | 1705002 | ID=MS.gene36292.t1.exon9;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1705002 | 1705143 | 1705002 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1705235 | 1705389 | 1705235 | ID=MS.gene36292.t1.exon10;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1705235 | 1705389 | 1705235 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1706096 | 1706187 | 1706096 | ID=MS.gene36292.t1.exon11;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1706096 | 1706187 | 1706096 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1706261 | 1706356 | 1706261 | ID=MS.gene36292.t1.exon12;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1706261 | 1706356 | 1706261 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1706451 | 1706519 | 1706451 | ID=MS.gene36292.t1.exon13;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1706451 | 1706519 | 1706451 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1706868 | 1706954 | 1706868 | ID=MS.gene36292.t1.exon14;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1706868 | 1706954 | 1706868 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1707156 | 1707215 | 1707156 | ID=MS.gene36292.t1.exon15;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1707156 | 1707215 | 1707156 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1707304 | 1707419 | 1707304 | ID=MS.gene36292.t1.exon16;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1707304 | 1707419 | 1707304 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1707945 | 1708002 | 1707945 | ID=MS.gene36292.t1.exon17;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1707945 | 1708002 | 1707945 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1708073 | 1708178 | 1708073 | ID=MS.gene36292.t1.exon18;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1708073 | 1708178 | 1708073 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1709363 | 1709436 | 1709363 | ID=MS.gene36292.t1.exon19;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1709363 | 1709436 | 1709363 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1709530 | 1709887 | 1709530 | ID=MS.gene36292.t1.exon20;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1709530 | 1709887 | 1709530 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1709970 | 1710124 | 1709970 | ID=MS.gene36292.t1.exon21;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1709970 | 1710124 | 1709970 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1710463 | 1710608 | 1710463 | ID=MS.gene36292.t1.exon22;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1710463 | 1710608 | 1710463 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
chr2.2 | exon | 1711305 | 1711374 | 1711305 | ID=MS.gene36292.t1.exon23;Parent=MS.gene36292.t1 |
chr2.2 | CDS | 1711305 | 1711374 | 1711305 | ID=cds.MS.gene36292.t1;Parent=MS.gene36292.t1 |
Gene Sequence |
Protein sequence |