Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036639.t1 | RHN64084.1 | 99.7 | 656 | 2 | 0 | 1 | 656 | 1 | 656 | 0.00E+00 | 1302.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036639.t1 | Q9FYQ8 | 84.5 | 658 | 100 | 2 | 1 | 656 | 1 | 658 | 0.0e+00 | 1136.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036639.t1 | A0A396IID5 | 99.7 | 656 | 2 | 0 | 1 | 656 | 1 | 656 | 0.0e+00 | 1302.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80184 | MS.gene036639 | PPI |
| MS.gene32702 | MS.gene036639 | PPI |
| MS.gene36992 | MS.gene036639 | PPI |
| MS.gene36990 | MS.gene036639 | PPI |
| MS.gene051485 | MS.gene036639 | PPI |
| MS.gene016086 | MS.gene036639 | PPI |
| MS.gene036639 | MS.gene020254 | PPI |
| MS.gene36542 | MS.gene036639 | PPI |
| MS.gene014910 | MS.gene036639 | PPI |
| MS.gene42664 | MS.gene036639 | PPI |
| MS.gene33117 | MS.gene036639 | PPI |
| MS.gene058486 | MS.gene036639 | PPI |
| MS.gene011190 | MS.gene036639 | PPI |
| MS.gene80181 | MS.gene036639 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036639.t1 | MTR_0204s0010 | 100.000 | 448 | 0 | 0 | 209 | 656 | 1 | 448 | 0.0 | 905 |
| MS.gene036639.t1 | MTR_3g082140 | 67.530 | 656 | 201 | 7 | 7 | 656 | 10 | 659 | 0.0 | 882 |
| MS.gene036639.t1 | MTR_5g098730 | 67.085 | 638 | 201 | 7 | 23 | 656 | 33 | 665 | 0.0 | 872 |
| MS.gene036639.t1 | MTR_8g016270 | 44.228 | 667 | 313 | 12 | 10 | 656 | 21 | 648 | 0.0 | 560 |
| MS.gene036639.t1 | MTR_1g014080 | 43.891 | 663 | 314 | 12 | 14 | 656 | 13 | 637 | 0.0 | 543 |
| MS.gene036639.t1 | MTR_3g105950 | 44.697 | 660 | 302 | 13 | 19 | 656 | 18 | 636 | 0.0 | 543 |
| MS.gene036639.t1 | MTR_4g116770 | 92.754 | 207 | 13 | 1 | 1 | 207 | 1 | 205 | 3.04e-130 | 400 |
| MS.gene036639.t1 | MTR_5g077170 | 27.673 | 636 | 378 | 16 | 32 | 656 | 27 | 591 | 5.67e-79 | 262 |
| MS.gene036639.t1 | MTR_6g074910 | 27.969 | 640 | 375 | 17 | 29 | 656 | 23 | 588 | 5.58e-78 | 259 |
| MS.gene036639.t1 | MTR_4g053270 | 28.527 | 638 | 366 | 15 | 32 | 656 | 29 | 589 | 2.93e-71 | 242 |
| MS.gene036639.t1 | MTR_8g088730 | 36.905 | 420 | 247 | 9 | 247 | 656 | 178 | 589 | 1.18e-66 | 229 |
| MS.gene036639.t1 | MTR_2g006300 | 36.930 | 417 | 245 | 9 | 250 | 656 | 175 | 583 | 2.97e-63 | 220 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036639.t1 | AT5G35160 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
| MS.gene036639.t1 | AT5G35160 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
| MS.gene036639.t1 | AT5G35160 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
| MS.gene036639.t1 | AT5G35160 | 81.763 | 658 | 90 | 3 | 1 | 656 | 1 | 630 | 0.0 | 1083 |
| MS.gene036639.t1 | AT4G12650 | 67.593 | 648 | 199 | 6 | 14 | 656 | 11 | 652 | 0.0 | 862 |
| MS.gene036639.t1 | AT3G13772 | 44.495 | 654 | 304 | 13 | 23 | 656 | 27 | 641 | 0.0 | 555 |
| MS.gene036639.t1 | AT5G10840 | 43.797 | 669 | 312 | 13 | 13 | 656 | 19 | 648 | 0.0 | 546 |
| MS.gene036639.t1 | AT5G25100 | 43.498 | 669 | 310 | 13 | 14 | 656 | 18 | 644 | 0.0 | 542 |
| MS.gene036639.t1 | AT2G24170 | 44.122 | 655 | 307 | 12 | 22 | 656 | 22 | 637 | 0.0 | 540 |
| MS.gene036639.t1 | AT5G25100 | 43.343 | 676 | 308 | 14 | 14 | 656 | 18 | 651 | 0.0 | 540 |
| MS.gene036639.t1 | AT1G55130 | 42.511 | 661 | 321 | 12 | 16 | 656 | 16 | 637 | 0.0 | 538 |
| MS.gene036639.t1 | AT2G24170 | 42.140 | 458 | 211 | 9 | 22 | 462 | 22 | 442 | 5.20e-120 | 365 |
| MS.gene036639.t1 | AT2G01970 | 27.889 | 649 | 383 | 16 | 20 | 656 | 17 | 592 | 3.06e-84 | 276 |
| MS.gene036639.t1 | AT1G08350 | 29.376 | 657 | 370 | 19 | 14 | 656 | 13 | 589 | 3.23e-81 | 268 |
| MS.gene036639.t1 | AT1G08350 | 29.376 | 657 | 370 | 19 | 14 | 656 | 13 | 589 | 3.23e-81 | 268 |
| MS.gene036639.t1 | AT1G14670 | 28.947 | 646 | 380 | 16 | 20 | 656 | 17 | 592 | 3.11e-80 | 266 |
| MS.gene036639.t1 | AT5G37310 | 27.717 | 635 | 378 | 15 | 32 | 656 | 30 | 593 | 3.59e-78 | 260 |
| MS.gene036639.t1 | AT5G37310 | 27.717 | 635 | 378 | 15 | 32 | 656 | 30 | 593 | 3.59e-78 | 260 |
| MS.gene036639.t1 | AT1G08350 | 28.351 | 582 | 329 | 15 | 88 | 656 | 2 | 508 | 1.38e-67 | 230 |
| MS.gene036639.t1 | AT1G08350 | 28.881 | 599 | 324 | 19 | 14 | 598 | 13 | 523 | 3.67e-67 | 229 |
| MS.gene036639.t1 | AT1G10950 | 36.691 | 417 | 246 | 9 | 250 | 656 | 181 | 589 | 9.14e-65 | 224 |
Find 183 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGGTCTCCTCATATTTA+TGG | 0.158373 | 8.4:+13614138 | None:intergenic |
| ATCAAATACAAGATAGTTTA+TGG | 0.166753 | 8.4:+13612867 | None:intergenic |
| CAATCTTGAACTTCCTATTA+TGG | 0.180368 | 8.4:-13613332 | MS.gene036639:CDS |
| TTGGGTTCCTCTCTTCATTC+TGG | 0.207220 | 8.4:-13612753 | MS.gene036639:CDS |
| GAGGAATTTCTCTAGGAATT+TGG | 0.209657 | 8.4:+13613166 | None:intergenic |
| CCCTGTTGGTATTAAGATTC+AGG | 0.247344 | 8.4:-13614204 | MS.gene036639:CDS |
| TCCTTCTTTGTTGTGTATAA+TGG | 0.248630 | 8.4:-13613607 | MS.gene036639:CDS |
| TTCTCAGATCCTTCCTTAAC+AGG | 0.259590 | 8.4:+13614071 | None:intergenic |
| GGATCGAGAATTCGCCTTAT+AGG | 0.263740 | 8.4:-13614409 | MS.gene036639:CDS |
| ATGGTGATCACTTTCCTTGC+TGG | 0.283624 | 8.4:-13613774 | MS.gene036639:CDS |
| GGTGATGGAGTTCAGATTCT+TGG | 0.295289 | 8.4:-13613582 | MS.gene036639:CDS |
| ATTTGTTTGGTGTTTCAATC+AGG | 0.295668 | 8.4:-13614623 | MS.gene036639:CDS |
| AGCGGCTGGCCTTCTTTAAT+AGG | 0.301449 | 8.4:+13613915 | None:intergenic |
| AATATAACAAAGAGAGAAAA+TGG | 0.302358 | 8.4:+13613285 | None:intergenic |
| TCTTTATCATGTCCAGCATT+TGG | 0.304826 | 8.4:-13613068 | MS.gene036639:CDS |
| GACCAATGTGGCTCGTGTTA+TGG | 0.324827 | 8.4:-13614123 | MS.gene036639:CDS |
| GGTAAACTATAATAACTAAA+TGG | 0.337219 | 8.4:+13614500 | None:intergenic |
| GGAATTTGGTTGGTTCTAAC+AGG | 0.337867 | 8.4:+13613180 | None:intergenic |
| TACTTTGGCTTCCCCATAAT+AGG | 0.338322 | 8.4:+13613319 | None:intergenic |
| AATCTTGAACTTCCTATTAT+GGG | 0.344499 | 8.4:-13613331 | MS.gene036639:CDS |
| TGTTTCTGCAACTCTGTACT+TGG | 0.345457 | 8.4:-13612824 | MS.gene036639:CDS |
| CTGGGTCATGGCTATTTGTT+TGG | 0.351997 | 8.4:-13614636 | MS.gene036639:CDS |
| TTGTTATATTGCTATTGCTT+TGG | 0.352574 | 8.4:-13613272 | MS.gene036639:CDS |
| TTATCTTCTTGAGAACTGTT+AGG | 0.357759 | 8.4:-13613740 | MS.gene036639:CDS |
| GTAAACATCTTAAACCTATA+AGG | 0.359924 | 8.4:+13614395 | None:intergenic |
| GGGTATGGTTTCTACCTTCC+GGG | 0.364387 | 8.4:-13614602 | MS.gene036639:CDS |
| ACCAATGTGGCTCGTGTTAT+GGG | 0.372249 | 8.4:-13614122 | MS.gene036639:CDS |
| CACAACAAAGAAGGATTTGA+TGG | 0.373080 | 8.4:+13613615 | None:intergenic |
| GGTGCTGGCACCCTTCCCTT+TGG | 0.373371 | 8.4:-13613111 | MS.gene036639:CDS |
| TCCTGAATCTTAATACCAAC+AGG | 0.375336 | 8.4:+13614203 | None:intergenic |
| CTTATCAAGCTCCTCATAAC+TGG | 0.375567 | 8.4:+13613707 | None:intergenic |
| CTCGATCCTCAATTCGTTGA+TGG | 0.377219 | 8.4:-13613793 | MS.gene036639:CDS |
| ACACTTGTTGGTGGCTACTT+TGG | 0.378171 | 8.4:-13613228 | MS.gene036639:CDS |
| GTCGATGGATCACATTTAAT+AGG | 0.380805 | 8.4:+13613948 | None:intergenic |
| CTTGGGATACTCACTCTTCA+TGG | 0.381798 | 8.4:-13612806 | MS.gene036639:CDS |
| TCTGTCCCACTTACACTTGT+TGG | 0.386331 | 8.4:-13613240 | MS.gene036639:CDS |
| TGGAAATCATTCTTTGCCTC+TGG | 0.395692 | 8.4:-13612919 | MS.gene036639:CDS |
| GTGATGGAGTTCAGATTCTT+GGG | 0.403271 | 8.4:-13613581 | MS.gene036639:CDS |
| TATCATGTCCAGCATTTGGA+TGG | 0.407267 | 8.4:-13613064 | MS.gene036639:CDS |
| TACCCACACAATTATGCAAT+TGG | 0.410515 | 8.4:-13614575 | MS.gene036639:CDS |
| GTACATGGTTGTTGGGTTTG+AGG | 0.411511 | 8.4:-13614042 | MS.gene036639:CDS |
| TAAAGAACAGCTCAATGAAA+AGG | 0.422226 | 8.4:+13613085 | None:intergenic |
| TGGTTGGAAGCTTGTGGTGG+GGG | 0.425246 | 8.4:-13613652 | MS.gene036639:CDS |
| AAGCCGGGGTACATGGTTGT+TGG | 0.426097 | 8.4:-13614050 | MS.gene036639:CDS |
| GTGCGGCGATCAGAAGGGTT+GGG | 0.426321 | 8.4:-13613412 | MS.gene036639:CDS |
| AGCCGGGGTACATGGTTGTT+GGG | 0.426832 | 8.4:-13614049 | MS.gene036639:CDS |
| ATATCAAGTGGCCATCTAGA+TGG | 0.430148 | 8.4:-13613857 | MS.gene036639:CDS |
| TCTGGTTGGAAGCTTGTGGT+GGG | 0.432889 | 8.4:-13613654 | MS.gene036639:CDS |
| AAGTACAGAGTTGCAGAAAC+AGG | 0.445695 | 8.4:+13612826 | None:intergenic |
| CAGATGAATGAGGAGTTATC+TGG | 0.450439 | 8.4:-13613672 | MS.gene036639:CDS |
| ATCTGGTTGGAAGCTTGTGG+TGG | 0.453164 | 8.4:-13613655 | MS.gene036639:CDS |
| ACAATATTGTTTGCTGCACT+TGG | 0.457516 | 8.4:-13613546 | MS.gene036639:CDS |
| ATGGAATGGCTCCTGTACTT+TGG | 0.461027 | 8.4:+13613304 | None:intergenic |
| TTGGTGTTTCAATCAGGGTA+TGG | 0.463389 | 8.4:-13614617 | MS.gene036639:CDS |
| TGCACCTCTGTGTGGAGGAT+TGG | 0.467543 | 8.4:-13612951 | MS.gene036639:CDS |
| TCTTCTGTGAAGTTGGATTG+AGG | 0.467795 | 8.4:-13612712 | None:intergenic |
| ATCTGAGAAGCCGGGGTACA+TGG | 0.468660 | 8.4:-13614057 | MS.gene036639:CDS |
| AGGGTATGGTTTCTACCTTC+CGG | 0.473489 | 8.4:-13614603 | MS.gene036639:CDS |
| GAGGGATCTGGCCAGTTATG+AGG | 0.477456 | 8.4:-13613718 | MS.gene036639:CDS |
| GAGGATGAAGAAGGCAATAC+CGG | 0.480232 | 8.4:+13613356 | None:intergenic |
| TGTTCTTGTCCATAAATATG+AGG | 0.481033 | 8.4:-13614147 | MS.gene036639:CDS |
| AGGGTTGGGTTTCAGTTGCA+TGG | 0.484208 | 8.4:-13613398 | MS.gene036639:CDS |
| AAGTAAGCATCCCATCTAGA+TGG | 0.484918 | 8.4:+13613846 | None:intergenic |
| CGTGCGGCGATCAGAAGGGT+TGG | 0.485992 | 8.4:-13613413 | MS.gene036639:CDS |
| AAGGATAGTGCTGAGAATCT+AGG | 0.486339 | 8.4:-13614452 | MS.gene036639:CDS |
| GTCCCACTTACACTTGTTGG+TGG | 0.488890 | 8.4:-13613237 | MS.gene036639:CDS |
| TTTGTTTGGTGTTTCAATCA+GGG | 0.489983 | 8.4:-13614622 | MS.gene036639:CDS |
| CAAATTCAAATTCTGGGTCA+TGG | 0.490284 | 8.4:-13614648 | MS.gene036639:CDS |
| TTGTGTATAATGGTTGGTGA+TGG | 0.492346 | 8.4:-13613597 | MS.gene036639:CDS |
| ACTCGCGTGCGGCGATCAGA+AGG | 0.493442 | 8.4:-13613418 | MS.gene036639:CDS |
| TACCTACGAGGTAACGTTTG+AGG | 0.495432 | 8.4:-13613886 | MS.gene036639:CDS |
| ATGGGATGCTTACTTGAAGA+TGG | 0.497074 | 8.4:-13613838 | MS.gene036639:CDS |
| CAGTTATGAGGAGCTTGATA+AGG | 0.497655 | 8.4:-13613706 | MS.gene036639:CDS |
| ATGATACTTGGTATTGCTGC+TGG | 0.498593 | 8.4:-13613468 | MS.gene036639:CDS |
| CTCAATGAAAAGGGTTCCAA+AGG | 0.503492 | 8.4:+13613095 | None:intergenic |
| GATCGAGAACCAATGGACTT+TGG | 0.504056 | 8.4:+13613809 | None:intergenic |
| CGTAGGTAAACGCAAGCGGC+TGG | 0.506527 | 8.4:+13613901 | None:intergenic |
| TGTTGGTGACAGGCACAGTT+GGG | 0.507832 | 8.4:-13612771 | MS.gene036639:CDS |
| AAAGCTGCTTGTTTCTTCCC+CGG | 0.509099 | 8.4:-13613375 | MS.gene036639:CDS |
| TGCAATTGGTGATGAATTGT+CGG | 0.510847 | 8.4:-13614561 | MS.gene036639:CDS |
| TGGAGGATTGGAGATGGTGG+TGG | 0.512530 | 8.4:-13612939 | MS.gene036639:CDS |
| CAAGAACATTAAATCTAAGA+TGG | 0.515293 | 8.4:+13614162 | None:intergenic |
| CTAGCAATCATGTTGGTGAC+AGG | 0.515495 | 8.4:-13612781 | MS.gene036639:CDS |
| GAGAACTGTTAGGAGGGATC+TGG | 0.516130 | 8.4:-13613730 | MS.gene036639:CDS |
| GAATCTAGGTGAGCTTCTCA+TGG | 0.516684 | 8.4:-13614438 | MS.gene036639:CDS |
| AAAGAACAGCTCAATGAAAA+GGG | 0.520078 | 8.4:+13613086 | None:intergenic |
| TCTTGTGGTGGTTTGTGCTG+AGG | 0.521715 | 8.4:-13612995 | MS.gene036639:CDS |
| TAGCCACCAACAAGTGTAAG+TGG | 0.522399 | 8.4:+13613234 | None:intergenic |
| GTGGCTCGTGTTATGGGAAC+CGG | 0.523916 | 8.4:-13614116 | MS.gene036639:CDS |
| ACCTGTGATAAGTGTTCCAC+GGG | 0.526211 | 8.4:+13613506 | None:intergenic |
| TGATCACCATCAACGAATTG+AGG | 0.527193 | 8.4:+13613787 | None:intergenic |
| AACACGGCCCATCCAAATGC+TGG | 0.527959 | 8.4:+13613056 | None:intergenic |
| TTCATGTCACCGGCCTCCCG+TGG | 0.527959 | 8.4:-13613522 | MS.gene036639:CDS |
| AAGGAAGGATCTGAGAAGCC+GGG | 0.528711 | 8.4:-13614065 | MS.gene036639:CDS |
| AATTTCTCTAGGAATTTGGT+TGG | 0.529324 | 8.4:+13613170 | None:intergenic |
| ATAAGTGTTCCACGGGAGGC+CGG | 0.530499 | 8.4:+13613513 | None:intergenic |
| ACCATTATACACAACAAAGA+AGG | 0.534847 | 8.4:+13613606 | None:intergenic |
| CTGGTTGGAAGCTTGTGGTG+GGG | 0.535511 | 8.4:-13613653 | MS.gene036639:CDS |
| AATCATCTCAGCCGCATCAC+CGG | 0.536909 | 8.4:+13614097 | None:intergenic |
| TCTTTGTTGTGTATAATGGT+TGG | 0.537010 | 8.4:-13613603 | MS.gene036639:CDS |
| TCACCAATTGCATAATTGTG+TGG | 0.538717 | 8.4:+13614572 | None:intergenic |
| CTTCTTGAGAACTGTTAGGA+GGG | 0.539675 | 8.4:-13613736 | MS.gene036639:CDS |
| ATAGGCATTGCCACAGTCGA+TGG | 0.540885 | 8.4:+13613933 | None:intergenic |
| CGCTGCTGAGGAATTTCTCT+AGG | 0.541640 | 8.4:+13613159 | None:intergenic |
| TAAGGAAGGATCTGAGAAGC+CGG | 0.543364 | 8.4:-13614066 | MS.gene036639:CDS |
| TCTTCTTGAGAACTGTTAGG+AGG | 0.545064 | 8.4:-13613737 | MS.gene036639:CDS |
| AGGATGAAGAAGGCAATACC+GGG | 0.546046 | 8.4:+13613357 | None:intergenic |
| ATCATGTCCAGCATTTGGAT+GGG | 0.548416 | 8.4:-13613063 | MS.gene036639:CDS |
| TATCAAGTGGCCATCTAGAT+GGG | 0.549497 | 8.4:-13613856 | MS.gene036639:CDS |
| GGATCACATTTAATAGGTGA+CGG | 0.552812 | 8.4:+13613954 | None:intergenic |
| TGGTGGCTACTTTGGAGCAA+AGG | 0.554397 | 8.4:-13613220 | MS.gene036639:CDS |
| ATGTTGGTGACAGGCACAGT+TGG | 0.557996 | 8.4:-13612772 | MS.gene036639:CDS |
| AATCTAGGTGAGCTTCTCAT+GGG | 0.557996 | 8.4:-13614437 | MS.gene036639:CDS |
| GGATGCTTACTTGAAGATGG+AGG | 0.561604 | 8.4:-13613835 | MS.gene036639:CDS |
| TTCTTCGTAAAACGAATAGC+AGG | 0.562872 | 8.4:+13614257 | None:intergenic |
| TGGAGGGAGCCAAAGTCCAT+TGG | 0.566645 | 8.4:-13613818 | MS.gene036639:CDS |
| TGAAAAGGGTTCCAAAGGGA+AGG | 0.570056 | 8.4:+13613100 | None:intergenic |
| CACCAATTGCATAATTGTGT+GGG | 0.570143 | 8.4:+13614573 | None:intergenic |
| TCTCAGATCCTTCCTTAACA+GGG | 0.572609 | 8.4:+13614072 | None:intergenic |
| TGGAGTTCAGATTCTTGGGA+TGG | 0.573301 | 8.4:-13613577 | MS.gene036639:CDS |
| GTGGCAATGCCTATTAAAGA+AGG | 0.576450 | 8.4:-13613924 | MS.gene036639:CDS |
| GATCACATTTAATAGGTGAC+GGG | 0.577005 | 8.4:+13613955 | None:intergenic |
| GTGTGGAGGATTGGAGATGG+TGG | 0.579374 | 8.4:-13612942 | MS.gene036639:CDS |
| CAAGATTGTGAGGATGAAGA+AGG | 0.582999 | 8.4:+13613347 | None:intergenic |
| GATGTTTACTAATGAGTCTG+AGG | 0.583355 | 8.4:-13614381 | MS.gene036639:CDS |
| GTTATCTGGTTGGAAGCTTG+TGG | 0.588427 | 8.4:-13613658 | MS.gene036639:CDS |
| TCCCATAACACGAGCCACAT+TGG | 0.588765 | 8.4:+13614121 | None:intergenic |
| TGCACTTGGATTCATGTCAC+CGG | 0.589020 | 8.4:-13613532 | MS.gene036639:CDS |
| GTTTCTGCAACTCTGTACTT+GGG | 0.589552 | 8.4:-13612823 | MS.gene036639:CDS |
| AGATGGACTGGGTACCCTGT+TGG | 0.591209 | 8.4:-13614218 | MS.gene036639:CDS |
| ATCTTGAACTTCCTATTATG+GGG | 0.592990 | 8.4:-13613330 | MS.gene036639:CDS |
| TTATGGGGAAGCCAAAGTAC+AGG | 0.594384 | 8.4:-13613315 | MS.gene036639:CDS |
| AATTGAGGATCGAGAACCAA+TGG | 0.597715 | 8.4:+13613802 | None:intergenic |
| GTTATGTTTCAGTTCGACTG+TGG | 0.597723 | 8.4:-13613446 | MS.gene036639:CDS |
| TCCCGTGGAACACTTATCAC+AGG | 0.598031 | 8.4:-13613507 | MS.gene036639:CDS |
| CTCGCGTGCGGCGATCAGAA+GGG | 0.598186 | 8.4:-13613417 | MS.gene036639:CDS |
| CATGGTTCTAGCAATCATGT+TGG | 0.600699 | 8.4:-13612788 | MS.gene036639:CDS |
| AAGAAGGATTTGATGGAGCA+CGG | 0.601804 | 8.4:+13613622 | None:intergenic |
| TACCTGTGATAAGTGTTCCA+CGG | 0.602595 | 8.4:+13613505 | None:intergenic |
| TCAATGAAAAGGGTTCCAAA+GGG | 0.608377 | 8.4:+13613096 | None:intergenic |
| TAATTGTGTGGGTAACTACC+CGG | 0.608773 | 8.4:+13614584 | None:intergenic |
| AACAAAGAGAGAAAATGGAA+TGG | 0.610331 | 8.4:+13613290 | None:intergenic |
| AGCTCAAGCACAGATGAATG+AGG | 0.617907 | 8.4:-13613682 | MS.gene036639:CDS |
| CTCAGATCCTTCCTTAACAG+GGG | 0.621573 | 8.4:+13614073 | None:intergenic |
| ATCTAGGTGAGCTTCTCATG+GGG | 0.627364 | 8.4:-13614436 | MS.gene036639:CDS |
| TCTGTGTGGAGGATTGGAGA+TGG | 0.630692 | 8.4:-13612945 | MS.gene036639:CDS |
| CACGACGGATACCGCTGCTG+AGG | 0.631043 | 8.4:+13613147 | None:intergenic |
| GATGCTTACTTGAAGATGGA+GGG | 0.631078 | 8.4:-13613834 | MS.gene036639:CDS |
| GAAAAGGGTTCCAAAGGGAA+GGG | 0.631885 | 8.4:+13613101 | None:intergenic |
| TGAATGAGGAGTTATCTGGT+TGG | 0.637187 | 8.4:-13613668 | MS.gene036639:CDS |
| TCAGATCCTTCCTTAACAGG+GGG | 0.637373 | 8.4:+13614074 | None:intergenic |
| TGTGATAAGTGTTCCACGGG+AGG | 0.637733 | 8.4:+13613509 | None:intergenic |
| TGGTTCTAACAGGATACTCA+AGG | 0.638465 | 8.4:+13613190 | None:intergenic |
| CTCAGCAGCGGTATCCGTCG+TGG | 0.639819 | 8.4:-13613146 | MS.gene036639:CDS |
| ACCCGAAAACATAGTAAACA+CGG | 0.641523 | 8.4:+13613040 | None:intergenic |
| TTGAGGAGAGTGATATCAAG+TGG | 0.642653 | 8.4:-13613869 | MS.gene036639:CDS |
| GCATTATGCATAATACTACA+AGG | 0.643881 | 8.4:+13614014 | None:intergenic |
| ATAGGAAGTTCAAGATTGTG+AGG | 0.645085 | 8.4:+13613337 | None:intergenic |
| AACCCAACAACCATGTACCC+CGG | 0.645248 | 8.4:+13614047 | None:intergenic |
| CTAGAGAAATTCCTCAGCAG+CGG | 0.650903 | 8.4:-13613158 | MS.gene036639:CDS |
| TTACATGCACCTCTGTGTGG+AGG | 0.651300 | 8.4:-13612956 | MS.gene036639:CDS |
| AACTTACATGCACCTCTGTG+TGG | 0.652266 | 8.4:-13612959 | MS.gene036639:CDS |
| CTCCTCAAACGTTACCTCGT+AGG | 0.655284 | 8.4:+13613884 | None:intergenic |
| AGGAAGGATCTGAGAAGCCG+GGG | 0.657385 | 8.4:-13614064 | MS.gene036639:CDS |
| AGCCACCAACAAGTGTAAGT+GGG | 0.658396 | 8.4:+13613235 | None:intergenic |
| ACCTCGTAGGTAAACGCAAG+CGG | 0.659065 | 8.4:+13613897 | None:intergenic |
| TGGTGATGAATTGTCGGTGA+AGG | 0.659099 | 8.4:-13614555 | MS.gene036639:CDS |
| GCCGCTTGCGTTTACCTACG+AGG | 0.660211 | 8.4:-13613898 | MS.gene036639:CDS |
| ACACGAACCAGAATGAAGAG+AGG | 0.661550 | 8.4:+13612746 | None:intergenic |
| TGTTATGGGAACCGGTGATG+CGG | 0.663081 | 8.4:-13614108 | MS.gene036639:CDS |
| TAACAAGAACAATACCAGCA+AGG | 0.672966 | 8.4:+13613760 | None:intergenic |
| CTAACAGGATACTCAAGGTG+AGG | 0.675817 | 8.4:+13613195 | None:intergenic |
| TTTGATCTCAAGAATCTGAG+TGG | 0.676176 | 8.4:-13612850 | MS.gene036639:CDS |
| CTGTGGAGAACACTCGCGTG+CGG | 0.676822 | 8.4:-13613429 | MS.gene036639:CDS |
| CCTGAATCTTAATACCAACA+GGG | 0.677762 | 8.4:+13614204 | None:intergenic |
| GTACAGTGCAACAGAACCAG+AGG | 0.685889 | 8.4:+13612903 | None:intergenic |
| TAAATGTGATCCATCGACTG+TGG | 0.688100 | 8.4:-13613943 | MS.gene036639:CDS |
| CCTAGAACTAAAAGCCACGA+CGG | 0.690997 | 8.4:+13613132 | None:intergenic |
| TGTGTGGGTAACTACCCGGA+AGG | 0.693942 | 8.4:+13614588 | None:intergenic |
| TCTAGGTGAGCTTCTCATGG+GGG | 0.697948 | 8.4:-13614435 | MS.gene036639:CDS |
| TAAATATGAGGAGACCAATG+TGG | 0.708708 | 8.4:-13614135 | MS.gene036639:CDS |
| ATCTCCAATCCTCCACACAG+AGG | 0.744593 | 8.4:+13612947 | None:intergenic |
| GGATGAAGAAGGCAATACCG+GGG | 0.767636 | 8.4:+13613358 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAACAAAGAGAGAAAA+TGG | + | chr8.4:13614094-13614113 | None:intergenic | 20.0% |
| !! | ATCAAATACAAGATAGTTTA+TGG | + | chr8.4:13614512-13614531 | None:intergenic | 20.0% |
| !! | GGTAAACTATAATAACTAAA+TGG | + | chr8.4:13612879-13612898 | None:intergenic | 20.0% |
| !!! | TTTTCACAAATTCAAATTCT+GGG | - | chr8.4:13612722-13612741 | MS.gene036639:CDS | 20.0% |
| ! | AATCTTGAACTTCCTATTAT+GGG | - | chr8.4:13614045-13614064 | MS.gene036639:CDS | 25.0% |
| ! | CAAGAACATTAAATCTAAGA+TGG | + | chr8.4:13613217-13613236 | None:intergenic | 25.0% |
| ! | GTAAACATCTTAAACCTATA+AGG | + | chr8.4:13612984-13613003 | None:intergenic | 25.0% |
| !! | CTTTTCACAAATTCAAATTC+TGG | - | chr8.4:13612721-13612740 | MS.gene036639:CDS | 25.0% |
| !! | TTGTTATATTGCTATTGCTT+TGG | - | chr8.4:13614104-13614123 | MS.gene036639:CDS | 25.0% |
| AAAGAACAGCTCAATGAAAA+GGG | + | chr8.4:13614293-13614312 | None:intergenic | 30.0% | |
| AACAAAGAGAGAAAATGGAA+TGG | + | chr8.4:13614089-13614108 | None:intergenic | 30.0% | |
| ACCATTATACACAACAAAGA+AGG | + | chr8.4:13613773-13613792 | None:intergenic | 30.0% | |
| AGTTCAAGATCTTGAAAAAG+AGG | - | chr8.4:13613054-13613073 | MS.gene036639:CDS | 30.0% | |
| ATCTTGAACTTCCTATTATG+GGG | - | chr8.4:13614046-13614065 | MS.gene036639:CDS | 30.0% | |
| CAATCTTGAACTTCCTATTA+TGG | - | chr8.4:13614044-13614063 | MS.gene036639:CDS | 30.0% | |
| GCATTATGCATAATACTACA+AGG | + | chr8.4:13613365-13613384 | None:intergenic | 30.0% | |
| TAAAGAACAGCTCAATGAAA+AGG | + | chr8.4:13614294-13614313 | None:intergenic | 30.0% | |
| TGTTCTTGTCCATAAATATG+AGG | - | chr8.4:13613229-13613248 | MS.gene036639:CDS | 30.0% | |
| TTATCTTCTTGAGAACTGTT+AGG | - | chr8.4:13613636-13613655 | MS.gene036639:CDS | 30.0% | |
| ! | AATTTCTCTAGGAATTTGGT+TGG | + | chr8.4:13614209-13614228 | None:intergenic | 30.0% |
| ! | TACCTTTTTGTAAACCTCAA+GGG | - | chr8.4:13612895-13612914 | MS.gene036639:CDS | 30.0% |
| ! | TCCTTCTTTGTTGTGTATAA+TGG | - | chr8.4:13613769-13613788 | MS.gene036639:CDS | 30.0% |
| ! | TCTTTGTTGTGTATAATGGT+TGG | - | chr8.4:13613773-13613792 | MS.gene036639:CDS | 30.0% |
| ! | TTACCTTTTTGTAAACCTCA+AGG | - | chr8.4:13612894-13612913 | MS.gene036639:CDS | 30.0% |
| !! | AAGATGAGTACTTTTTGAGA+TGG | - | chr8.4:13613141-13613160 | MS.gene036639:CDS | 30.0% |
| !! | ATTTGTTTGGTGTTTCAATC+AGG | - | chr8.4:13612753-13612772 | MS.gene036639:CDS | 30.0% |
| !! | CTGTTTTTCTACATGATACT+TGG | - | chr8.4:13613896-13613915 | MS.gene036639:CDS | 30.0% |
| !! | TTTGTTTGGTGTTTCAATCA+GGG | - | chr8.4:13612754-13612773 | MS.gene036639:CDS | 30.0% |
| !!! | CATTGTTTTGATTCTTCTTG+TGG | - | chr8.4:13614366-13614385 | MS.gene036639:CDS | 30.0% |
| ACCCGAAAACATAGTAAACA+CGG | + | chr8.4:13614339-13614358 | None:intergenic | 35.0% | |
| ATAGGAAGTTCAAGATTGTG+AGG | + | chr8.4:13614042-13614061 | None:intergenic | 35.0% | |
| CAAATTCAAATTCTGGGTCA+TGG | - | chr8.4:13612728-13612747 | MS.gene036639:CDS | 35.0% | |
| CACAACAAAGAAGGATTTGA+TGG | + | chr8.4:13613764-13613783 | None:intergenic | 35.0% | |
| CACCAATTGCATAATTGTGT+GGG | + | chr8.4:13612806-13612825 | None:intergenic | 35.0% | |
| CCTGAATCTTAATACCAACA+GGG | + | chr8.4:13613175-13613194 | None:intergenic | 35.0% | |
| GATCACATTTAATAGGTGAC+GGG | + | chr8.4:13613424-13613443 | None:intergenic | 35.0% | |
| GATGTTTACTAATGAGTCTG+AGG | - | chr8.4:13612995-13613014 | MS.gene036639:CDS | 35.0% | |
| GGATCACATTTAATAGGTGA+CGG | + | chr8.4:13613425-13613444 | None:intergenic | 35.0% | |
| GTCGATGGATCACATTTAAT+AGG | + | chr8.4:13613431-13613450 | None:intergenic | 35.0% | |
| TAAATATGAGGAGACCAATG+TGG | - | chr8.4:13613241-13613260 | MS.gene036639:CDS | 35.0% | |
| TAACAAGAACAATACCAGCA+AGG | + | chr8.4:13613619-13613638 | None:intergenic | 35.0% | |
| TACCCACACAATTATGCAAT+TGG | - | chr8.4:13612801-13612820 | MS.gene036639:CDS | 35.0% | |
| TCAATGAAAAGGGTTCCAAA+GGG | + | chr8.4:13614283-13614302 | None:intergenic | 35.0% | |
| TCACCAATTGCATAATTGTG+TGG | + | chr8.4:13612807-13612826 | None:intergenic | 35.0% | |
| TCCTGAATCTTAATACCAAC+AGG | + | chr8.4:13613176-13613195 | None:intergenic | 35.0% | |
| TCTTTATCATGTCCAGCATT+TGG | - | chr8.4:13614308-13614327 | MS.gene036639:CDS | 35.0% | |
| TTCTTCGTAAAACGAATAGC+AGG | + | chr8.4:13613122-13613141 | None:intergenic | 35.0% | |
| TTTGATCTCAAGAATCTGAG+TGG | - | chr8.4:13614526-13614545 | MS.gene036639:CDS | 35.0% | |
| ! | ACAATATTGTTTGCTGCACT+TGG | - | chr8.4:13613830-13613849 | MS.gene036639:CDS | 35.0% |
| ! | ACCTTTTTGTAAACCTCAAG+GGG | - | chr8.4:13612896-13612915 | MS.gene036639:CDS | 35.0% |
| ! | CATTGGTCTCCTCATATTTA+TGG | + | chr8.4:13613241-13613260 | None:intergenic | 35.0% |
| ! | GAGGAATTTCTCTAGGAATT+TGG | + | chr8.4:13614213-13614232 | None:intergenic | 35.0% |
| !! | CTTGTTTTCTTCTGTGAAGT+TGG | - | chr8.4:13614657-13614676 | MS.gene036639:CDS | 35.0% |
| !! | TGCAATTGGTGATGAATTGT+CGG | - | chr8.4:13612815-13612834 | MS.gene036639:CDS | 35.0% |
| !! | TTGTGTATAATGGTTGGTGA+TGG | - | chr8.4:13613779-13613798 | MS.gene036639:CDS | 35.0% |
| !!! | AGTACTTTTTGAGATGGACT+GGG | - | chr8.4:13613147-13613166 | MS.gene036639:CDS | 35.0% |
| !!! | TGTTTTGATTCTTCTTGTGG+TGG | - | chr8.4:13614369-13614388 | MS.gene036639:CDS | 35.0% |
| AAGAAGGATTTGATGGAGCA+CGG | + | chr8.4:13613757-13613776 | None:intergenic | 40.0% | |
| AAGTAAGCATCCCATCTAGA+TGG | + | chr8.4:13613533-13613552 | None:intergenic | 40.0% | |
| AAGTACAGAGTTGCAGAAAC+AGG | + | chr8.4:13614553-13614572 | None:intergenic | 40.0% | |
| AATCTAGGTGAGCTTCTCAT+GGG | - | chr8.4:13612939-13612958 | MS.gene036639:CDS | 40.0% | |
| AATTGAGGATCGAGAACCAA+TGG | + | chr8.4:13613577-13613596 | None:intergenic | 40.0% | |
| ATATCAAGTGGCCATCTAGA+TGG | - | chr8.4:13613519-13613538 | MS.gene036639:CDS | 40.0% | |
| ATCATGTCCAGCATTTGGAT+GGG | - | chr8.4:13614313-13614332 | MS.gene036639:CDS | 40.0% | |
| ATGATACTTGGTATTGCTGC+TGG | - | chr8.4:13613908-13613927 | MS.gene036639:CDS | 40.0% | |
| ATGGGATGCTTACTTGAAGA+TGG | - | chr8.4:13613538-13613557 | MS.gene036639:CDS | 40.0% | |
| CAAGATTGTGAGGATGAAGA+AGG | + | chr8.4:13614032-13614051 | None:intergenic | 40.0% | |
| CAGATGAATGAGGAGTTATC+TGG | - | chr8.4:13613704-13613723 | MS.gene036639:CDS | 40.0% | |
| CAGTTATGAGGAGCTTGATA+AGG | - | chr8.4:13613670-13613689 | MS.gene036639:CDS | 40.0% | |
| CCCTGTTGGTATTAAGATTC+AGG | - | chr8.4:13613172-13613191 | MS.gene036639:CDS | 40.0% | |
| CTCAATGAAAAGGGTTCCAA+AGG | + | chr8.4:13614284-13614303 | None:intergenic | 40.0% | |
| CTTATCAAGCTCCTCATAAC+TGG | + | chr8.4:13613672-13613691 | None:intergenic | 40.0% | |
| CTTCTTGAGAACTGTTAGGA+GGG | - | chr8.4:13613640-13613659 | MS.gene036639:CDS | 40.0% | |
| GATGCTTACTTGAAGATGGA+GGG | - | chr8.4:13613542-13613561 | MS.gene036639:CDS | 40.0% | |
| GTGGCAATGCCTATTAAAGA+AGG | - | chr8.4:13613452-13613471 | MS.gene036639:CDS | 40.0% | |
| GTTATGTTTCAGTTCGACTG+TGG | - | chr8.4:13613930-13613949 | MS.gene036639:CDS | 40.0% | |
| GTTTCTGCAACTCTGTACTT+GGG | - | chr8.4:13614553-13614572 | MS.gene036639:CDS | 40.0% | |
| TAATTGTGTGGGTAACTACC+CGG | + | chr8.4:13612795-13612814 | None:intergenic | 40.0% | |
| TACCTGTGATAAGTGTTCCA+CGG | + | chr8.4:13613874-13613893 | None:intergenic | 40.0% | |
| TATCAAGTGGCCATCTAGAT+GGG | - | chr8.4:13613520-13613539 | MS.gene036639:CDS | 40.0% | |
| TATCATGTCCAGCATTTGGA+TGG | - | chr8.4:13614312-13614331 | MS.gene036639:CDS | 40.0% | |
| TCTCAGATCCTTCCTTAACA+GGG | + | chr8.4:13613307-13613326 | None:intergenic | 40.0% | |
| TCTTCTTGAGAACTGTTAGG+AGG | - | chr8.4:13613639-13613658 | MS.gene036639:CDS | 40.0% | |
| TGAATGAGGAGTTATCTGGT+TGG | - | chr8.4:13613708-13613727 | MS.gene036639:CDS | 40.0% | |
| TGATCACCATCAACGAATTG+AGG | + | chr8.4:13613592-13613611 | None:intergenic | 40.0% | |
| TGGAAATCATTCTTTGCCTC+TGG | - | chr8.4:13614457-13614476 | MS.gene036639:CDS | 40.0% | |
| TTCTCAGATCCTTCCTTAAC+AGG | + | chr8.4:13613308-13613327 | None:intergenic | 40.0% | |
| TTGAGGAGAGTGATATCAAG+TGG | - | chr8.4:13613507-13613526 | MS.gene036639:CDS | 40.0% | |
| ! | AAGGATAGTGCTGAGAATCT+AGG | - | chr8.4:13612924-13612943 | MS.gene036639:CDS | 40.0% |
| ! | CCTTTTTGTAAACCTCAAGG+GGG | - | chr8.4:13612897-13612916 | MS.gene036639:CDS | 40.0% |
| ! | GCCGTGTTTACTATGTTTTC+GGG | - | chr8.4:13614335-13614354 | MS.gene036639:CDS | 40.0% |
| ! | GGCCGTGTTTACTATGTTTT+CGG | - | chr8.4:13614334-13614353 | MS.gene036639:CDS | 40.0% |
| ! | GTGATGGAGTTCAGATTCTT+GGG | - | chr8.4:13613795-13613814 | MS.gene036639:CDS | 40.0% |
| ! | TAAATGTGATCCATCGACTG+TGG | - | chr8.4:13613433-13613452 | MS.gene036639:CDS | 40.0% |
| ! | TACTTTGGCTTCCCCATAAT+AGG | + | chr8.4:13614060-13614079 | None:intergenic | 40.0% |
| ! | TGTTTCTGCAACTCTGTACT+TGG | - | chr8.4:13614552-13614571 | MS.gene036639:CDS | 40.0% |
| ! | TTGGTGTTTCAATCAGGGTA+TGG | - | chr8.4:13612759-13612778 | MS.gene036639:CDS | 40.0% |
| !! | CATGGTTCTAGCAATCATGT+TGG | - | chr8.4:13614588-13614607 | MS.gene036639:CDS | 40.0% |
| !! | GGAATTTGGTTGGTTCTAAC+AGG | + | chr8.4:13614199-13614218 | None:intergenic | 40.0% |
| !! | TGGTTCTAACAGGATACTCA+AGG | + | chr8.4:13614189-13614208 | None:intergenic | 40.0% |
| !!! | GAGTACTTTTTGAGATGGAC+TGG | - | chr8.4:13613146-13613165 | MS.gene036639:CDS | 40.0% |
| AACTTACATGCACCTCTGTG+TGG | - | chr8.4:13614417-13614436 | MS.gene036639:CDS | 45.0% | |
| ACACGAACCAGAATGAAGAG+AGG | + | chr8.4:13614633-13614652 | None:intergenic | 45.0% | |
| ACCAATGTGGCTCGTGTTAT+GGG | - | chr8.4:13613254-13613273 | MS.gene036639:CDS | 45.0% | |
| ACCTGTGATAAGTGTTCCAC+GGG | + | chr8.4:13613873-13613892 | None:intergenic | 45.0% | |
| AGCCACCAACAAGTGTAAGT+GGG | + | chr8.4:13614144-13614163 | None:intergenic | 45.0% | |
| AGCTCAAGCACAGATGAATG+AGG | - | chr8.4:13613694-13613713 | MS.gene036639:CDS | 45.0% | |
| AGGATGAAGAAGGCAATACC+GGG | + | chr8.4:13614022-13614041 | None:intergenic | 45.0% | |
| AGGGTATGGTTTCTACCTTC+CGG | - | chr8.4:13612773-13612792 | MS.gene036639:CDS | 45.0% | |
| ATCTAGGTGAGCTTCTCATG+GGG | - | chr8.4:13612940-13612959 | MS.gene036639:CDS | 45.0% | |
| ATGATTCCCCCTGTTAAGGA+AGG | - | chr8.4:13613296-13613315 | MS.gene036639:CDS | 45.0% | |
| ATGGAATGGCTCCTGTACTT+TGG | + | chr8.4:13614075-13614094 | None:intergenic | 45.0% | |
| ATGGTGATCACTTTCCTTGC+TGG | - | chr8.4:13613602-13613621 | MS.gene036639:CDS | 45.0% | |
| CCCCCTTGAGGTTTACAAAA+AGG | + | chr8.4:13612900-13612919 | None:intergenic | 45.0% | |
| CCTAGAACTAAAAGCCACGA+CGG | + | chr8.4:13614247-13614266 | None:intergenic | 45.0% | |
| CTAACAGGATACTCAAGGTG+AGG | + | chr8.4:13614184-13614203 | None:intergenic | 45.0% | |
| CTAGAGAAATTCCTCAGCAG+CGG | - | chr8.4:13614218-13614237 | MS.gene036639:CDS | 45.0% | |
| CTCAGATCCTTCCTTAACAG+GGG | + | chr8.4:13613306-13613325 | None:intergenic | 45.0% | |
| CTCGATCCTCAATTCGTTGA+TGG | - | chr8.4:13613583-13613602 | MS.gene036639:CDS | 45.0% | |
| CTGGGTCATGGCTATTTGTT+TGG | - | chr8.4:13612740-13612759 | MS.gene036639:CDS | 45.0% | |
| CTTGGGATACTCACTCTTCA+TGG | - | chr8.4:13614570-13614589 | MS.gene036639:CDS | 45.0% | |
| GAAAAGGGTTCCAAAGGGAA+GGG | + | chr8.4:13614278-13614297 | None:intergenic | 45.0% | |
| GAATCTAGGTGAGCTTCTCA+TGG | - | chr8.4:13612938-13612957 | MS.gene036639:CDS | 45.0% | |
| GAGGATGAAGAAGGCAATAC+CGG | + | chr8.4:13614023-13614042 | None:intergenic | 45.0% | |
| GGATCGAGAATTCGCCTTAT+AGG | - | chr8.4:13612967-13612986 | MS.gene036639:CDS | 45.0% | |
| GGATGCTTACTTGAAGATGG+AGG | - | chr8.4:13613541-13613560 | MS.gene036639:CDS | 45.0% | |
| GTACATGGTTGTTGGGTTTG+AGG | - | chr8.4:13613334-13613353 | MS.gene036639:CDS | 45.0% | |
| GTTATCTGGTTGGAAGCTTG+TGG | - | chr8.4:13613718-13613737 | MS.gene036639:CDS | 45.0% | |
| TAAGGAAGGATCTGAGAAGC+CGG | - | chr8.4:13613310-13613329 | MS.gene036639:CDS | 45.0% | |
| TACCTACGAGGTAACGTTTG+AGG | - | chr8.4:13613490-13613509 | MS.gene036639:CDS | 45.0% | |
| TAGCCACCAACAAGTGTAAG+TGG | + | chr8.4:13614145-13614164 | None:intergenic | 45.0% | |
| TCAGATCCTTCCTTAACAGG+GGG | + | chr8.4:13613305-13613324 | None:intergenic | 45.0% | |
| TCTGTCCCACTTACACTTGT+TGG | - | chr8.4:13614136-13614155 | MS.gene036639:CDS | 45.0% | |
| TGAAAAGGGTTCCAAAGGGA+AGG | + | chr8.4:13614279-13614298 | None:intergenic | 45.0% | |
| TGAGATGATTCCCCCTGTTA+AGG | - | chr8.4:13613292-13613311 | MS.gene036639:CDS | 45.0% | |
| TGCACTTGGATTCATGTCAC+CGG | - | chr8.4:13613844-13613863 | MS.gene036639:CDS | 45.0% | |
| TGGAGTTCAGATTCTTGGGA+TGG | - | chr8.4:13613799-13613818 | MS.gene036639:CDS | 45.0% | |
| TTATGGGGAAGCCAAAGTAC+AGG | - | chr8.4:13614061-13614080 | MS.gene036639:CDS | 45.0% | |
| TTGGGTTCCTCTCTTCATTC+TGG | - | chr8.4:13614623-13614642 | MS.gene036639:CDS | 45.0% | |
| ! | AAAGCTGCTTGTTTCTTCCC+CGG | - | chr8.4:13614001-13614020 | MS.gene036639:CDS | 45.0% |
| ! | GATCGAGAACCAATGGACTT+TGG | + | chr8.4:13613570-13613589 | None:intergenic | 45.0% |
| ! | TGGTGATGAATTGTCGGTGA+AGG | - | chr8.4:13612821-13612840 | MS.gene036639:CDS | 45.0% |
| !! | ACACTTGTTGGTGGCTACTT+TGG | - | chr8.4:13614148-13614167 | MS.gene036639:CDS | 45.0% |
| !! | CTAGCAATCATGTTGGTGAC+AGG | - | chr8.4:13614595-13614614 | MS.gene036639:CDS | 45.0% |
| !! | GGTGATGGAGTTCAGATTCT+TGG | - | chr8.4:13613794-13613813 | MS.gene036639:CDS | 45.0% |
| !! | TAAACCTCAAGGGGGTGTTA+AGG | - | chr8.4:13612905-13612924 | MS.gene036639:CDS | 45.0% |
| !!! | TGGCTTTTAGTTCTAGGTGC+TGG | - | chr8.4:13614250-13614269 | MS.gene036639:CDS | 45.0% |
| AACCCAACAACCATGTACCC+CGG | + | chr8.4:13613332-13613351 | None:intergenic | 50.0% | |
| AAGGAAGGATCTGAGAAGCC+GGG | - | chr8.4:13613311-13613330 | MS.gene036639:CDS | 50.0% | |
| AATCATCTCAGCCGCATCAC+CGG | + | chr8.4:13613282-13613301 | None:intergenic | 50.0% | |
| ACCTCGTAGGTAAACGCAAG+CGG | + | chr8.4:13613482-13613501 | None:intergenic | 50.0% | |
| AGGGTTGGGTTTCAGTTGCA+TGG | - | chr8.4:13613978-13613997 | MS.gene036639:CDS | 50.0% | |
| ATCTCCAATCCTCCACACAG+AGG | + | chr8.4:13614432-13614451 | None:intergenic | 50.0% | |
| ATCTGGTTGGAAGCTTGTGG+TGG | - | chr8.4:13613721-13613740 | MS.gene036639:CDS | 50.0% | |
| CGCTGCTGAGGAATTTCTCT+AGG | + | chr8.4:13614220-13614239 | None:intergenic | 50.0% | |
| CTATCCTTAACACCCCCTTG+AGG | + | chr8.4:13612912-13612931 | None:intergenic | 50.0% | |
| CTCCTCAAACGTTACCTCGT+AGG | + | chr8.4:13613495-13613514 | None:intergenic | 50.0% | |
| GACCAATGTGGCTCGTGTTA+TGG | - | chr8.4:13613253-13613272 | MS.gene036639:CDS | 50.0% | |
| GAGAACTGTTAGGAGGGATC+TGG | - | chr8.4:13613646-13613665 | MS.gene036639:CDS | 50.0% | |
| GGATGAAGAAGGCAATACCG+GGG | + | chr8.4:13614021-13614040 | None:intergenic | 50.0% | |
| GGGTATGGTTTCTACCTTCC+GGG | - | chr8.4:13612774-13612793 | MS.gene036639:CDS | 50.0% | |
| GTACAGTGCAACAGAACCAG+AGG | + | chr8.4:13614476-13614495 | None:intergenic | 50.0% | |
| TCCCATAACACGAGCCACAT+TGG | + | chr8.4:13613258-13613277 | None:intergenic | 50.0% | |
| TCCCGTGGAACACTTATCAC+AGG | - | chr8.4:13613869-13613888 | MS.gene036639:CDS | 50.0% | |
| TCTAGGTGAGCTTCTCATGG+GGG | - | chr8.4:13612941-13612960 | MS.gene036639:CDS | 50.0% | |
| TCTGGTTGGAAGCTTGTGGT+GGG | - | chr8.4:13613722-13613741 | MS.gene036639:CDS | 50.0% | |
| TCTGTGTGGAGGATTGGAGA+TGG | - | chr8.4:13614431-13614450 | MS.gene036639:CDS | 50.0% | |
| TGTGATAAGTGTTCCACGGG+AGG | + | chr8.4:13613870-13613889 | None:intergenic | 50.0% | |
| TGTTATGGGAACCGGTGATG+CGG | - | chr8.4:13613268-13613287 | MS.gene036639:CDS | 50.0% | |
| TTACATGCACCTCTGTGTGG+AGG | - | chr8.4:13614420-13614439 | MS.gene036639:CDS | 50.0% | |
| ! | ATAGGCATTGCCACAGTCGA+TGG | + | chr8.4:13613446-13613465 | None:intergenic | 50.0% |
| ! | GTCCCACTTACACTTGTTGG+TGG | - | chr8.4:13614139-13614158 | MS.gene036639:CDS | 50.0% |
| ! | TCTTGTGGTGGTTTGTGCTG+AGG | - | chr8.4:13614381-13614400 | MS.gene036639:CDS | 50.0% |
| !! | AGCGGCTGGCCTTCTTTAAT+AGG | + | chr8.4:13613464-13613483 | None:intergenic | 50.0% |
| !! | ATGTTGGTGACAGGCACAGT+TGG | - | chr8.4:13614604-13614623 | MS.gene036639:CDS | 50.0% |
| !! | TGGTGGCTACTTTGGAGCAA+AGG | - | chr8.4:13614156-13614175 | MS.gene036639:CDS | 50.0% |
| !! | TGTTGGTGACAGGCACAGTT+GGG | - | chr8.4:13614605-13614624 | MS.gene036639:CDS | 50.0% |
| !!! | CCGTCGTGGCTTTTAGTTCT+AGG | - | chr8.4:13614244-13614263 | MS.gene036639:CDS | 50.0% |
| AACACGGCCCATCCAAATGC+TGG | + | chr8.4:13614323-13614342 | None:intergenic | 55.0% | |
| AAGCCGGGGTACATGGTTGT+TGG | - | chr8.4:13613326-13613345 | MS.gene036639:CDS | 55.0% | |
| AGCCGGGGTACATGGTTGTT+GGG | - | chr8.4:13613327-13613346 | MS.gene036639:CDS | 55.0% | |
| AGGAAGGATCTGAGAAGCCG+GGG | - | chr8.4:13613312-13613331 | MS.gene036639:CDS | 55.0% | |
| ATAAGTGTTCCACGGGAGGC+CGG | + | chr8.4:13613866-13613885 | None:intergenic | 55.0% | |
| ATCTGAGAAGCCGGGGTACA+TGG | - | chr8.4:13613319-13613338 | MS.gene036639:CDS | 55.0% | |
| CTGGTTGGAAGCTTGTGGTG+GGG | - | chr8.4:13613723-13613742 | MS.gene036639:CDS | 55.0% | |
| GAGGGATCTGGCCAGTTATG+AGG | - | chr8.4:13613658-13613677 | MS.gene036639:CDS | 55.0% | |
| GTGAGCTTCTCATGGGGGAT+CGG | - | chr8.4:13612946-13612965 | MS.gene036639:CDS | 55.0% | |
| GTGGCTCGTGTTATGGGAAC+CGG | - | chr8.4:13613260-13613279 | MS.gene036639:CDS | 55.0% | |
| GTGTGGAGGATTGGAGATGG+TGG | - | chr8.4:13614434-13614453 | MS.gene036639:CDS | 55.0% | |
| TGCACCTCTGTGTGGAGGAT+TGG | - | chr8.4:13614425-13614444 | MS.gene036639:CDS | 55.0% | |
| TGGAGGGAGCCAAAGTCCAT+TGG | - | chr8.4:13613558-13613577 | MS.gene036639:CDS | 55.0% | |
| TGGTTGGAAGCTTGTGGTGG+GGG | - | chr8.4:13613724-13613743 | MS.gene036639:CDS | 55.0% | |
| TGTGTGGGTAACTACCCGGA+AGG | + | chr8.4:13612791-13612810 | None:intergenic | 55.0% | |
| ! | TGGAGGATTGGAGATGGTGG+TGG | - | chr8.4:13614437-13614456 | MS.gene036639:CDS | 55.0% |
| !! | AGATGGACTGGGTACCCTGT+TGG | - | chr8.4:13613158-13613177 | MS.gene036639:CDS | 55.0% |
| CGTAGGTAAACGCAAGCGGC+TGG | + | chr8.4:13613478-13613497 | None:intergenic | 60.0% | |
| CTGTGGAGAACACTCGCGTG+CGG | - | chr8.4:13613947-13613966 | MS.gene036639:CDS | 60.0% | |
| GCCGCTTGCGTTTACCTACG+AGG | - | chr8.4:13613478-13613497 | MS.gene036639:CDS | 60.0% | |
| GTGCGGCGATCAGAAGGGTT+GGG | - | chr8.4:13613964-13613983 | MS.gene036639:CDS | 60.0% | |
| ACTCGCGTGCGGCGATCAGA+AGG | - | chr8.4:13613958-13613977 | MS.gene036639:CDS | 65.0% | |
| CACGACGGATACCGCTGCTG+AGG | + | chr8.4:13614232-13614251 | None:intergenic | 65.0% | |
| CGTGCGGCGATCAGAAGGGT+TGG | - | chr8.4:13613963-13613982 | MS.gene036639:CDS | 65.0% | |
| CTCAGCAGCGGTATCCGTCG+TGG | - | chr8.4:13614230-13614249 | MS.gene036639:CDS | 65.0% | |
| CTCGCGTGCGGCGATCAGAA+GGG | - | chr8.4:13613959-13613978 | MS.gene036639:CDS | 65.0% | |
| TTCATGTCACCGGCCTCCCG+TGG | - | chr8.4:13613854-13613873 | MS.gene036639:CDS | 65.0% | |
| !! | GGTGCTGGCACCCTTCCCTT+TGG | - | chr8.4:13614265-13614284 | MS.gene036639:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 13612714 | 13614684 | 13612714 | ID=MS.gene036639 |
| chr8.4 | mRNA | 13612714 | 13614684 | 13612714 | ID=MS.gene036639.t1;Parent=MS.gene036639 |
| chr8.4 | exon | 13612714 | 13614684 | 13612714 | ID=MS.gene036639.t1.exon1;Parent=MS.gene036639.t1 |
| chr8.4 | CDS | 13612714 | 13614684 | 13612714 | ID=cds.MS.gene036639.t1;Parent=MS.gene036639.t1 |
| Gene Sequence |
| Protein sequence |
