Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014910.t1 | XP_003603291.1 | 99.8 | 636 | 1 | 0 | 1 | 636 | 1 | 636 | 0.00E+00 | 1255.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014910.t1 | Q9C5N2 | 83.3 | 645 | 98 | 3 | 1 | 636 | 1 | 644 | 2.5e-312 | 1072.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014910.t1 | G7J9U2 | 99.8 | 636 | 1 | 0 | 1 | 636 | 1 | 636 | 0.0e+00 | 1255.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014910 | MS.gene32702 | PPI |
| MS.gene014910 | MS.gene36990 | PPI |
| MS.gene014910 | MS.gene42664 | PPI |
| MS.gene014910 | MS.gene58761 | PPI |
| MS.gene80184 | MS.gene014910 | PPI |
| MS.gene014910 | MS.gene57710 | PPI |
| MS.gene014910 | MS.gene80181 | PPI |
| MS.gene32702 | MS.gene014910 | PPI |
| MS.gene014910 | MS.gene36992 | PPI |
| MS.gene014910 | MS.gene020254 | PPI |
| MS.gene014910 | MS.gene33117 | PPI |
| MS.gene014910 | MS.gene36542 | PPI |
| MS.gene014910 | MS.gene051485 | PPI |
| MS.gene014910 | MS.gene80184 | PPI |
| MS.gene014910 | MS.gene058486 | PPI |
| MS.gene014910 | MS.gene041418 | PPI |
| MS.gene014910 | MS.gene011190 | PPI |
| MS.gene014910 | MS.gene036639 | PPI |
| MS.gene014910 | MS.gene016086 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014910.t1 | MTR_3g105950 | 99.843 | 636 | 1 | 0 | 1 | 636 | 1 | 636 | 0.0 | 1307 |
| MS.gene014910.t1 | MTR_1g014080 | 89.655 | 638 | 63 | 3 | 1 | 636 | 1 | 637 | 0.0 | 1160 |
| MS.gene014910.t1 | MTR_8g016270 | 75.475 | 632 | 153 | 2 | 6 | 636 | 18 | 648 | 0.0 | 999 |
| MS.gene014910.t1 | MTR_5g098730 | 45.023 | 653 | 301 | 14 | 22 | 636 | 33 | 665 | 0.0 | 531 |
| MS.gene014910.t1 | MTR_3g082140 | 44.720 | 644 | 316 | 15 | 22 | 636 | 27 | 659 | 2.89e-179 | 524 |
| MS.gene014910.t1 | MTR_0204s0010 | 48.690 | 458 | 212 | 7 | 191 | 636 | 2 | 448 | 1.30e-150 | 443 |
| MS.gene014910.t1 | MTR_6g074910 | 32.237 | 608 | 357 | 8 | 35 | 636 | 30 | 588 | 6.43e-111 | 345 |
| MS.gene014910.t1 | MTR_5g077170 | 32.072 | 608 | 360 | 8 | 35 | 636 | 31 | 591 | 4.63e-110 | 343 |
| MS.gene014910.t1 | MTR_8g088730 | 33.225 | 614 | 343 | 10 | 35 | 636 | 31 | 589 | 8.33e-100 | 317 |
| MS.gene014910.t1 | MTR_2g006300 | 33.607 | 610 | 340 | 9 | 37 | 636 | 29 | 583 | 2.01e-96 | 308 |
| MS.gene014910.t1 | MTR_4g053270 | 30.744 | 605 | 362 | 10 | 36 | 634 | 34 | 587 | 3.01e-86 | 281 |
| MS.gene014910.t1 | MTR_7g060560 | 87.288 | 118 | 15 | 0 | 91 | 208 | 274 | 391 | 1.29e-63 | 215 |
| MS.gene014910.t1 | MTR_3g090510 | 81.967 | 122 | 20 | 1 | 87 | 208 | 275 | 394 | 1.68e-60 | 207 |
| MS.gene014910.t1 | MTR_5g014340 | 79.439 | 107 | 17 | 1 | 93 | 199 | 1 | 102 | 4.50e-43 | 155 |
| MS.gene014910.t1 | MTR_4g116770 | 40.704 | 199 | 101 | 6 | 1 | 193 | 1 | 188 | 4.63e-33 | 135 |
| MS.gene014910.t1 | MTR_0249s0060 | 85.294 | 68 | 10 | 0 | 93 | 160 | 1 | 68 | 4.82e-28 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014910.t1 | AT5G25100 | 83.256 | 645 | 98 | 3 | 1 | 636 | 1 | 644 | 0.0 | 1092 |
| MS.gene014910.t1 | AT5G10840 | 82.535 | 647 | 101 | 3 | 1 | 636 | 3 | 648 | 0.0 | 1091 |
| MS.gene014910.t1 | AT5G25100 | 82.362 | 652 | 98 | 4 | 1 | 636 | 1 | 651 | 0.0 | 1087 |
| MS.gene014910.t1 | AT2G24170 | 80.408 | 638 | 122 | 3 | 1 | 636 | 1 | 637 | 0.0 | 1048 |
| MS.gene014910.t1 | AT3G13772 | 76.136 | 616 | 145 | 2 | 22 | 636 | 27 | 641 | 0.0 | 991 |
| MS.gene014910.t1 | AT1G55130 | 73.899 | 636 | 162 | 3 | 4 | 636 | 3 | 637 | 0.0 | 979 |
| MS.gene014910.t1 | AT2G24170 | 76.629 | 445 | 101 | 3 | 1 | 443 | 1 | 444 | 0.0 | 710 |
| MS.gene014910.t1 | AT5G35160 | 44.678 | 667 | 304 | 13 | 13 | 636 | 14 | 658 | 0.0 | 540 |
| MS.gene014910.t1 | AT5G35160 | 44.678 | 667 | 304 | 13 | 13 | 636 | 14 | 658 | 0.0 | 540 |
| MS.gene014910.t1 | AT5G35160 | 44.678 | 667 | 304 | 13 | 13 | 636 | 14 | 658 | 0.0 | 540 |
| MS.gene014910.t1 | AT4G12650 | 44.359 | 647 | 314 | 12 | 22 | 636 | 20 | 652 | 1.55e-173 | 509 |
| MS.gene014910.t1 | AT5G35160 | 42.643 | 666 | 291 | 13 | 13 | 636 | 14 | 630 | 3.97e-169 | 497 |
| MS.gene014910.t1 | AT2G01970 | 33.224 | 608 | 350 | 8 | 36 | 636 | 34 | 592 | 6.38e-118 | 364 |
| MS.gene014910.t1 | AT5G37310 | 31.905 | 630 | 360 | 10 | 24 | 636 | 16 | 593 | 5.41e-110 | 343 |
| MS.gene014910.t1 | AT5G37310 | 31.905 | 630 | 360 | 10 | 24 | 636 | 16 | 593 | 5.41e-110 | 343 |
| MS.gene014910.t1 | AT1G14670 | 32.120 | 632 | 373 | 8 | 12 | 636 | 10 | 592 | 6.31e-110 | 343 |
| MS.gene014910.t1 | AT1G10950 | 34.272 | 604 | 332 | 11 | 43 | 636 | 41 | 589 | 5.36e-99 | 315 |
| MS.gene014910.t1 | AT1G08350 | 30.866 | 635 | 378 | 12 | 11 | 636 | 7 | 589 | 2.52e-98 | 313 |
| MS.gene014910.t1 | AT1G08350 | 30.866 | 635 | 378 | 12 | 11 | 636 | 7 | 589 | 2.52e-98 | 313 |
| MS.gene014910.t1 | AT1G08350 | 30.948 | 559 | 326 | 11 | 86 | 636 | 2 | 508 | 1.19e-87 | 282 |
| MS.gene014910.t1 | AT1G08350 | 30.017 | 583 | 338 | 12 | 11 | 584 | 7 | 528 | 2.55e-83 | 272 |
Find 145 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTCCACAAGATTTCTTTA+AGG | 0.160692 | 3.1:-83829370 | MS.gene014910:intron |
| TCTCTTCTTGGGCTTCTTCC+TGG | 0.162911 | 3.1:+83826997 | None:intergenic |
| ATGATTGTTCTCTTCCTTTC+GGG | 0.199038 | 3.1:-83827086 | MS.gene014910:CDS |
| AACACGAGTATGATGGTAAA+TGG | 0.258508 | 3.1:-83827644 | MS.gene014910:CDS |
| GACAGCCATGCTCTTGGTTT+GGG | 0.261532 | 3.1:-83826811 | MS.gene014910:CDS |
| CAATAGAGAACCAGTGAATT+TGG | 0.271157 | 3.1:+83827120 | None:intergenic |
| CACATATGATGTTGATTTCC+AGG | 0.271731 | 3.1:-83827517 | MS.gene014910:intron |
| AATGATTGTTCTCTTCCTTT+CGG | 0.275069 | 3.1:-83827087 | MS.gene014910:CDS |
| CTCTTCTTGGGCTTCTTCCT+GGG | 0.277059 | 3.1:+83826998 | None:intergenic |
| TTGTCCATGGGGATGTATTT+AGG | 0.282833 | 3.1:-83826962 | MS.gene014910:CDS |
| TATATTAAATGCTCTCATTT+GGG | 0.284478 | 3.1:-83826661 | MS.gene014910:CDS |
| TGACAGCCATGCTCTTGGTT+TGG | 0.284901 | 3.1:-83826812 | MS.gene014910:CDS |
| GCTTCCAACCAGTCTCTTCT+TGG | 0.285153 | 3.1:+83826985 | None:intergenic |
| GTCATCATTCATTAGCAAAT+AGG | 0.315280 | 3.1:+83827142 | None:intergenic |
| TTGGATTCTATGCATGCTTT+TGG | 0.316198 | 3.1:-83826080 | MS.gene014910:CDS |
| GCTTTGAGGTTAAGCCATTC+AGG | 0.317785 | 3.1:-83827783 | MS.gene014910:intron |
| TTATATTAAATGCTCTCATT+TGG | 0.322327 | 3.1:-83826662 | MS.gene014910:CDS |
| ACCATGATATTTGCTATCCT+TGG | 0.330022 | 3.1:-83826867 | MS.gene014910:CDS |
| TTCACAGGATTCTCAATTGC+AGG | 0.336074 | 3.1:+83826525 | None:intergenic |
| GCCTGCTCAGGGATCTGCCT+TGG | 0.337693 | 3.1:+83826489 | None:intergenic |
| CTTCCAACCAGTCTCTTCTT+GGG | 0.349041 | 3.1:+83826986 | None:intergenic |
| TTCATGTACCAGGCCTGCTC+AGG | 0.350610 | 3.1:+83826477 | None:intergenic |
| TCTTTATCCTCACCTCAATC+TGG | 0.357240 | 3.1:-83826392 | MS.gene014910:CDS |
| TGGCGGTCATACCTTACTTC+TGG | 0.362279 | 3.1:-83826243 | MS.gene014910:CDS |
| CCCACAACATTACACATTTG+TGG | 0.366682 | 3.1:+83828258 | None:intergenic |
| GCTTTCTCCTTCTACCTTCC+CGG | 0.371736 | 3.1:-83829396 | MS.gene014910:CDS |
| GGTTCCTCTCTCCTTCAAAC+CGG | 0.375085 | 3.1:-83826845 | MS.gene014910:CDS |
| AGGATAGTGCAGAAAATCTT+GGG | 0.390517 | 3.1:-83828590 | MS.gene014910:CDS |
| TTTGTGGTTACCGGTACTAT+TGG | 0.395492 | 3.1:-83826099 | MS.gene014910:CDS |
| CCTGCTCAGGGATCTGCCTT+GGG | 0.397639 | 3.1:+83826490 | None:intergenic |
| CTGTGTGTTTATGTTGGAAC+AGG | 0.398214 | 3.1:-83826918 | MS.gene014910:CDS |
| CATGTATCCAAAGTAAAATA+TGG | 0.398933 | 3.1:+83826143 | None:intergenic |
| CACAGCAAATCTGAGTTGTT+AGG | 0.400145 | 3.1:+83826936 | None:intergenic |
| AATAAAATGAGTACGGAAGC+TGG | 0.403462 | 3.1:+83828643 | None:intergenic |
| TGCTAGAATCGTGGGCTTTG+AGG | 0.404094 | 3.1:-83827797 | MS.gene014910:CDS |
| CCATGATATTTGCTATCCTT+GGG | 0.409788 | 3.1:-83826866 | MS.gene014910:CDS |
| CTTTAGTTGTTCCCATAAAA+CGG | 0.410146 | 3.1:-83828049 | MS.gene014910:CDS |
| TGTTCTCTTCCTTTCGGGCA+TGG | 0.411830 | 3.1:-83827081 | MS.gene014910:CDS |
| TCATCTGGAGCTGTGCCATT+TGG | 0.418785 | 3.1:-83826630 | MS.gene014910:CDS |
| CAGCTTTGTGATTTCAAGCT+TGG | 0.419934 | 3.1:+83826173 | None:intergenic |
| CAGGATAGTGCAGAAAATCT+TGG | 0.422003 | 3.1:-83828591 | MS.gene014910:CDS |
| AGTAATCCTCACTGCACAAC+TGG | 0.425366 | 3.1:+83826274 | None:intergenic |
| ATTTGGTACAATGTTTGCTC+TGG | 0.433667 | 3.1:-83826613 | MS.gene014910:CDS |
| GTTCCTCTCTCCTTCAAACC+GGG | 0.434696 | 3.1:-83826844 | MS.gene014910:CDS |
| ACAGCAAATCTGAGTTGTTA+GGG | 0.443885 | 3.1:+83826937 | None:intergenic |
| AGCGACGCCGGGAAGGTAGA+AGG | 0.446747 | 3.1:+83829389 | None:intergenic |
| GACTCAAAGGGCAGTATACC+GGG | 0.448506 | 3.1:-83827983 | MS.gene014910:CDS |
| GCTCATGACAGCCATGCTCT+TGG | 0.449410 | 3.1:-83826817 | MS.gene014910:CDS |
| CATTGAAAATTCACTATATG+TGG | 0.454070 | 3.1:-83828547 | MS.gene014910:intron |
| GGTTTCCATGTTGGACTCAA+AGG | 0.456598 | 3.1:-83827996 | MS.gene014910:CDS |
| GGCAGATCCCTGAGCAGGCC+TGG | 0.457305 | 3.1:-83826485 | MS.gene014910:CDS |
| CACATCTCTATGATACTTGA+CGG | 0.457417 | 3.1:+83827831 | None:intergenic |
| TCCCATAAAACGGAATGATC+AGG | 0.460700 | 3.1:-83828039 | MS.gene014910:CDS |
| AAAATGACAGAGACAATTGC+AGG | 0.461385 | 3.1:+83826687 | None:intergenic |
| TATCAGCTTGGTTTCCATGT+TGG | 0.466494 | 3.1:-83828005 | MS.gene014910:CDS |
| TTGCTCTCTTCAACTTCTTG+AGG | 0.468169 | 3.1:+83827552 | None:intergenic |
| AGAAGATCAATGACGAGTAT+CGG | 0.469743 | 3.1:-83828194 | MS.gene014910:CDS |
| GGACTCAAAGGGCAGTATAC+CGG | 0.471498 | 3.1:-83827984 | MS.gene014910:CDS |
| GAAGATCAATGACGAGTATC+GGG | 0.473535 | 3.1:-83828193 | MS.gene014910:CDS |
| AGAAGGAGAAAGCGGTGTGA+AGG | 0.477134 | 3.1:+83829406 | None:intergenic |
| GAAATCTTGTGGAGCGACGC+CGG | 0.479883 | 3.1:+83829377 | None:intergenic |
| GATTTGCTGTGTGTTTATGT+TGG | 0.480715 | 3.1:-83826924 | MS.gene014910:CDS |
| TCTCTCCTTCAAACCGGGGT+GGG | 0.482513 | 3.1:-83826839 | MS.gene014910:CDS |
| ATGAGCCCACCCCGGTTTGA+AGG | 0.482813 | 3.1:+83826834 | None:intergenic |
| GAGGGTCACATGTTGTCAAA+CGG | 0.488799 | 3.1:+83827607 | None:intergenic |
| GTTTCCATGTTGGACTCAAA+GGG | 0.490076 | 3.1:-83827995 | MS.gene014910:CDS |
| AGGGTCACATGTTGTCAAAC+GGG | 0.490682 | 3.1:+83827608 | None:intergenic |
| ACACGAGTATGATGGTAAAT+GGG | 0.490956 | 3.1:-83827643 | MS.gene014910:CDS |
| AGAATGTTGCATAAAGAAAG+AGG | 0.493377 | 3.1:+83826205 | None:intergenic |
| CCAATCAAAACAGAGAAGGC+TGG | 0.495505 | 3.1:+83826453 | None:intergenic |
| GGAAGTGAATAAAATGAGTA+CGG | 0.496741 | 3.1:+83828636 | None:intergenic |
| AAATCTTGTGGAGCGACGCC+GGG | 0.513081 | 3.1:+83829378 | None:intergenic |
| GAAGGCTGGGTTCATGTACC+AGG | 0.517535 | 3.1:+83826467 | None:intergenic |
| ACTGGTTGGAAGCTTGTCCA+TGG | 0.517914 | 3.1:-83826975 | MS.gene014910:CDS |
| GATTCTACCGTCTATCAGCT+TGG | 0.519977 | 3.1:-83828017 | MS.gene014910:CDS |
| CTCTCTCCTTCAAACCGGGG+TGG | 0.526606 | 3.1:-83826840 | MS.gene014910:CDS |
| AGAGCAAACATTGTACCAAA+TGG | 0.527636 | 3.1:+83826615 | None:intergenic |
| CCCAAGGCAGATCCCTGAGC+AGG | 0.531266 | 3.1:-83826490 | MS.gene014910:CDS |
| CCCAAGGATAGCAAATATCA+TGG | 0.533552 | 3.1:+83826866 | None:intergenic |
| AAGCCCAAGAAGAGACTGGT+TGG | 0.534521 | 3.1:-83826989 | MS.gene014910:CDS |
| CAATCAAAACAGAGAAGGCT+GGG | 0.541967 | 3.1:+83826454 | None:intergenic |
| GTATAACGAGCTTGAGACCC+AGG | 0.542211 | 3.1:-83827015 | MS.gene014910:CDS |
| ATATTAAATGCTCTCATTTG+GGG | 0.542556 | 3.1:-83826660 | MS.gene014910:CDS |
| GCCACAAATGTGTAATGTTG+TGG | 0.542830 | 3.1:-83828259 | MS.gene014910:CDS |
| CTGGTTGGAAGCTTGTCCAT+GGG | 0.544476 | 3.1:-83826974 | MS.gene014910:CDS |
| TGCATAGAATCCAATAGTAC+CGG | 0.547684 | 3.1:+83826089 | None:intergenic |
| GTGCGGAAGAACCAGAAGTA+AGG | 0.547713 | 3.1:+83826232 | None:intergenic |
| CGCTTGTACAAAATGTTCAA+AGG | 0.556072 | 3.1:-83826753 | MS.gene014910:CDS |
| TCAAGAAGTTGAAGAGAGCA+AGG | 0.556425 | 3.1:-83827550 | MS.gene014910:CDS |
| ACTGAATCTGCTAGAATCGT+GGG | 0.559429 | 3.1:-83827805 | MS.gene014910:CDS |
| ATAAAATGAGTACGGAAGCT+GGG | 0.562743 | 3.1:+83828644 | None:intergenic |
| ATGTGAAGTGGGCTTCAAGA+TGG | 0.563049 | 3.1:-83827169 | MS.gene014910:CDS |
| GGAACAAGGTTGCAGTCCTG+AGG | 0.563341 | 3.1:+83826709 | None:intergenic |
| CAAGCTTGAAATCACAAAGC+TGG | 0.563454 | 3.1:-83826172 | MS.gene014910:CDS |
| CGGTAAATGCCAAATGATTG+TGG | 0.563495 | 3.1:+83827851 | None:intergenic |
| TCATGTACCAGGCCTGCTCA+GGG | 0.566599 | 3.1:+83826478 | None:intergenic |
| TCAATGAAAACAGCTCCAAA+TGG | 0.567404 | 3.1:+83826420 | None:intergenic |
| AAACTGATTCAACCAGATTG+AGG | 0.568595 | 3.1:+83826380 | None:intergenic |
| AACTGAATCTGCTAGAATCG+TGG | 0.569950 | 3.1:-83827806 | MS.gene014910:CDS |
| GAAGAAGCCCAAGAAGAGAC+TGG | 0.572886 | 3.1:-83826993 | MS.gene014910:CDS |
| TTATGGGAACAACTAAAGGA+AGG | 0.576141 | 3.1:+83828054 | None:intergenic |
| TGAATGATGACCAAATTCAC+TGG | 0.577066 | 3.1:-83827130 | MS.gene014910:CDS |
| CCACAAATGTGTAATGTTGT+GGG | 0.579438 | 3.1:-83828258 | MS.gene014910:CDS |
| GTGAGGATTACTTGTGGTGG+TGG | 0.581791 | 3.1:-83826263 | MS.gene014910:CDS |
| AATCTTGGGGAAGTTCTTCG+TGG | 0.582702 | 3.1:-83828576 | MS.gene014910:CDS |
| AGTACCTTAAAGAAATCTTG+TGG | 0.582843 | 3.1:+83829366 | None:intergenic |
| CTTGTGGAGCGACGCCGGGA+AGG | 0.583502 | 3.1:+83829382 | None:intergenic |
| AGAGACAATTGCAGGGAACA+AGG | 0.584334 | 3.1:+83826695 | None:intergenic |
| CGTTATACTTTGCAATGTCA+CGG | 0.586779 | 3.1:+83827030 | None:intergenic |
| AGGATTACTTGTGGTGGTGG+CGG | 0.591655 | 3.1:-83826260 | MS.gene014910:CDS |
| ACAACTGTGTGCTTAGCATG+AGG | 0.593523 | 3.1:+83827588 | None:intergenic |
| GAACAAGGTTGCAGTCCTGA+GGG | 0.599617 | 3.1:+83826710 | None:intergenic |
| CAACTGTGTGCTTAGCATGA+GGG | 0.605991 | 3.1:+83827589 | None:intergenic |
| AGTGTTAAACACGAGTATGA+TGG | 0.607329 | 3.1:-83827651 | MS.gene014910:CDS |
| TGTGAAGTGGGCTTCAAGAT+GGG | 0.611136 | 3.1:-83827168 | MS.gene014910:CDS |
| AGTGGAAAAGAATTGCCCTC+AGG | 0.612537 | 3.1:-83826725 | MS.gene014910:CDS |
| GAAAACCCAAACCAAGAGCA+TGG | 0.614652 | 3.1:+83826806 | None:intergenic |
| TCATTGCCACCATGCCCGAA+AGG | 0.619231 | 3.1:+83827072 | None:intergenic |
| TTTCAGCACAAGTGACAACA+AGG | 0.619677 | 3.1:+83826319 | None:intergenic |
| TGCAGGAGAGTGATGTGAAG+TGG | 0.630793 | 3.1:-83827181 | MS.gene014910:intron |
| CTACTTCCAGTTGTGCAGTG+AGG | 0.631692 | 3.1:-83826280 | MS.gene014910:CDS |
| ATGGAAACCAAGCTGATAGA+CGG | 0.633306 | 3.1:+83828010 | None:intergenic |
| TGAAAACAAACAAAATCCCA+AGG | 0.637171 | 3.1:-83826506 | MS.gene014910:CDS |
| TTCCTCTCTCCTTCAAACCG+GGG | 0.639857 | 3.1:-83826843 | MS.gene014910:CDS |
| GCAGGAGAGTGATGTGAAGT+GGG | 0.642804 | 3.1:-83827180 | MS.gene014910:intron |
| TTGAAGGAGAGAGGAACCCA+AGG | 0.649137 | 3.1:+83826850 | None:intergenic |
| GGATAGTGCAGAAAATCTTG+GGG | 0.654034 | 3.1:-83828589 | MS.gene014910:CDS |
| TCTCTTCCTTTCGGGCATGG+TGG | 0.655153 | 3.1:-83827078 | MS.gene014910:CDS |
| GCAGTGAGGATTACTTGTGG+TGG | 0.656188 | 3.1:-83826266 | MS.gene014910:CDS |
| AAATGACAGAGACAATTGCA+GGG | 0.656961 | 3.1:+83826688 | None:intergenic |
| GGGGCCTAAATACATCCCCA+TGG | 0.661749 | 3.1:+83826958 | None:intergenic |
| CACCCCGGTTTGAAGGAGAG+AGG | 0.665310 | 3.1:+83826841 | None:intergenic |
| TGGCTGTCATGAGCCCACCC+CGG | 0.665939 | 3.1:+83826826 | None:intergenic |
| CAGCAAATCTGAGTTGTTAG+GGG | 0.667045 | 3.1:+83826938 | None:intergenic |
| ACTGCCCTTTGAGTCCAACA+TGG | 0.674258 | 3.1:+83827991 | None:intergenic |
| AGCAAATCTGAGTTGTTAGG+GGG | 0.675452 | 3.1:+83826939 | None:intergenic |
| AAATGTTCAAAGGATCAGAG+TGG | 0.690463 | 3.1:-83826743 | MS.gene014910:CDS |
| TGTGCAGTGAGGATTACTTG+TGG | 0.692738 | 3.1:-83826269 | MS.gene014910:CDS |
| ATAAAGAAAGAGGTATAGTG+CGG | 0.699094 | 3.1:+83826215 | None:intergenic |
| GATTCAACCAGATTGAGGTG+AGG | 0.702133 | 3.1:+83826385 | None:intergenic |
| TGGTTGGAAGCTTGTCCATG+GGG | 0.704860 | 3.1:-83826973 | MS.gene014910:CDS |
| CTGGAAGTAGCAGAGCACAA+TGG | 0.716782 | 3.1:+83826293 | None:intergenic |
| GGGAAGGTAGAAGGAGAAAG+CGG | 0.717499 | 3.1:+83829398 | None:intergenic |
| ACTCAAAGGGCAGTATACCG+GGG | 0.753482 | 3.1:-83827982 | MS.gene014910:intron |
| AACGAATGTACAGAGCAAGG+AGG | 0.788698 | 3.1:-83827887 | MS.gene014910:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAATTTTTTAGTTTCTA+TGG | - | chr3.1:83827163-83827182 | MS.gene014910:CDS | 10.0% |
| !! | ATAAATGTTAAAAAATTGCT+TGG | + | chr3.1:83827142-83827161 | None:intergenic | 15.0% |
| !! | CTTAATGAAATATATAGTTT+AGG | - | chr3.1:83827021-83827040 | MS.gene014910:CDS | 15.0% |
| !!! | AAATGTGTTTTTTTTTTTTG+TGG | - | chr3.1:83826702-83826721 | MS.gene014910:CDS | 15.0% |
| !!! | ATTGATGAACATTTTTATAA+TGG | - | chr3.1:83828148-83828167 | MS.gene014910:intron | 15.0% |
| !! | GTCAATTGTTGAAAATAAAA+TGG | + | chr3.1:83827773-83827792 | None:intergenic | 20.0% |
| !! | GTTATTAACATACATGAATT+AGG | - | chr3.1:83828051-83828070 | MS.gene014910:CDS | 20.0% |
| !! | TAAAATATTTCTTTGTTGCA+GGG | - | chr3.1:83826783-83826802 | MS.gene014910:CDS | 20.0% |
| !! | TACTAATAATCGTTGATATA+CGG | - | chr3.1:83826355-83826374 | MS.gene014910:CDS | 20.0% |
| !! | TATATTAAATGCTCTCATTT+GGG | - | chr3.1:83828833-83828852 | MS.gene014910:intron | 20.0% |
| !! | TTAAAATATTTCTTTGTTGC+AGG | - | chr3.1:83826782-83826801 | MS.gene014910:CDS | 20.0% |
| !! | TTATATTAAATGCTCTCATT+TGG | - | chr3.1:83828832-83828851 | MS.gene014910:intron | 20.0% |
| !!! | TCATCTTTTTGTTTAGTATT+TGG | - | chr3.1:83827793-83827812 | MS.gene014910:CDS | 20.0% |
| !!! | TTTCAAGTTATATCTCATAA+TGG | - | chr3.1:83827386-83827405 | MS.gene014910:intron | 20.0% |
| !!! | TTTTTATCAGTTTCTAAGAA+AGG | - | chr3.1:83826994-83827013 | MS.gene014910:CDS | 20.0% |
| ! | AAGTAAGTAAGGAAACTTAT+TGG | + | chr3.1:83827581-83827600 | None:intergenic | 25.0% |
| ! | AGATTGAATCTTAATTTCAG+TGG | - | chr3.1:83826311-83826330 | MS.gene014910:CDS | 25.0% |
| ! | ATATTAAATGCTCTCATTTG+GGG | - | chr3.1:83828834-83828853 | MS.gene014910:intron | 25.0% |
| ! | CATGTATCCAAAGTAAAATA+TGG | + | chr3.1:83829354-83829373 | None:intergenic | 25.0% |
| ! | CATTGAAAATTCACTATATG+TGG | - | chr3.1:83826947-83826966 | MS.gene014910:CDS | 25.0% |
| ! | GATAGAAGAAAAAGAAAAGT+TGG | + | chr3.1:83828187-83828206 | None:intergenic | 25.0% |
| ! | GTTATTATTTGATTCCGATT+TGG | - | chr3.1:83827185-83827204 | MS.gene014910:intron | 25.0% |
| !! | AATCAGTTTTACTACATCTT+TGG | - | chr3.1:83829128-83829147 | MS.gene014910:intron | 25.0% |
| !! | ATCAGTTTTACTACATCTTT+GGG | - | chr3.1:83829129-83829148 | MS.gene014910:intron | 25.0% |
| !! | CATATAGTGAATTTTCAATG+CGG | + | chr3.1:83826947-83826966 | None:intergenic | 25.0% |
| !! | GTATTTTATCCACAATCATT+TGG | - | chr3.1:83827634-83827653 | MS.gene014910:CDS | 25.0% |
| !!! | TCTTTTTGTTTAGTATTTGG+TGG | - | chr3.1:83827796-83827815 | MS.gene014910:CDS | 25.0% |
| AAATACAGATCGAGAAGAAA+TGG | + | chr3.1:83826161-83826180 | None:intergenic | 30.0% | |
| AATGATTGTTCTCTTCCTTT+CGG | - | chr3.1:83828407-83828426 | MS.gene014910:intron | 30.0% | |
| AATGTTCATCAATGCAAAAG+AGG | + | chr3.1:83828141-83828160 | None:intergenic | 30.0% | |
| ACTGAAATATACCACCAAAT+CGG | + | chr3.1:83827202-83827221 | None:intergenic | 30.0% | |
| AGAAAACTCGCAGAAAATAA+CGG | + | chr3.1:83827344-83827363 | None:intergenic | 30.0% | |
| AGAATGTTGCATAAAGAAAG+AGG | + | chr3.1:83829292-83829311 | None:intergenic | 30.0% | |
| AGTACCTTAAAGAAATCTTG+TGG | + | chr3.1:83826131-83826150 | None:intergenic | 30.0% | |
| ATGTTCATCAATGCAAAAGA+GGG | + | chr3.1:83828140-83828159 | None:intergenic | 30.0% | |
| CACAAAAATAATGACCTGAA+TGG | + | chr3.1:83827728-83827747 | None:intergenic | 30.0% | |
| CTTTAGTTGTTCCCATAAAA+CGG | - | chr3.1:83827445-83827464 | MS.gene014910:intron | 30.0% | |
| GATAGCTGCATTACATTTAA+AGG | + | chr3.1:83826650-83826669 | None:intergenic | 30.0% | |
| GGAAGTGAATAAAATGAGTA+CGG | + | chr3.1:83826861-83826880 | None:intergenic | 30.0% | |
| GTATTGAATAACAATAGCCA+TGG | + | chr3.1:83827559-83827578 | None:intergenic | 30.0% | |
| GTCATCATTCATTAGCAAAT+AGG | + | chr3.1:83828355-83828374 | None:intergenic | 30.0% | |
| TAATAATCGTTGATATACGG+AGG | - | chr3.1:83826358-83826377 | MS.gene014910:CDS | 30.0% | |
| TCGTTCAGATAAAGTAAGTA+AGG | + | chr3.1:83827592-83827611 | None:intergenic | 30.0% | |
| TGAAAACAAACAAAATCCCA+AGG | - | chr3.1:83828988-83829007 | MS.gene014910:intron | 30.0% | |
| TTCACCATAACAAAAAAGAG+AGG | + | chr3.1:83828240-83828259 | None:intergenic | 30.0% | |
| ! | ATAAAGAAAGAGGTATAGTG+CGG | + | chr3.1:83829282-83829301 | None:intergenic | 30.0% |
| ! | TTCTTTTTCTTCTATCCAAC+TGG | - | chr3.1:83828191-83828210 | MS.gene014910:CDS | 30.0% |
| ! | TTTGAACTCCTTAGCATTTT+TGG | + | chr3.1:83827279-83827298 | None:intergenic | 30.0% |
| !! | AATAACCATTCTAAAGCACA+GGG | + | chr3.1:83828037-83828056 | None:intergenic | 30.0% |
| !! | ATTATTTGATTCCGATTTGG+TGG | - | chr3.1:83827188-83827207 | MS.gene014910:intron | 30.0% |
| !! | TAATAACCATTCTAAAGCAC+AGG | + | chr3.1:83828038-83828057 | None:intergenic | 30.0% |
| !!! | GAACAGGTGTTCAATTTTTT+GGG | - | chr3.1:83828592-83828611 | MS.gene014910:CDS | 30.0% |
| !!! | TCATCCTCTCTTTTTTGTTA+TGG | - | chr3.1:83828233-83828252 | MS.gene014910:CDS | 30.0% |
| AAAATGACAGAGACAATTGC+AGG | + | chr3.1:83828810-83828829 | None:intergenic | 35.0% | |
| AAATGACAGAGACAATTGCA+GGG | + | chr3.1:83828809-83828828 | None:intergenic | 35.0% | |
| AAATGTTCAAAGGATCAGAG+TGG | - | chr3.1:83828751-83828770 | MS.gene014910:intron | 35.0% | |
| AACACGAGTATGATGGTAAA+TGG | - | chr3.1:83827850-83827869 | MS.gene014910:CDS | 35.0% | |
| AATAAAATGAGTACGGAAGC+TGG | + | chr3.1:83826854-83826873 | None:intergenic | 35.0% | |
| AATGAAGAAGACAATCCAGT+TGG | + | chr3.1:83828209-83828228 | None:intergenic | 35.0% | |
| AATGTGGTTATCCAATTCAG+AGG | + | chr3.1:83827056-83827075 | None:intergenic | 35.0% | |
| ACAAAACAATATGCATACCC+CGG | + | chr3.1:83827532-83827551 | None:intergenic | 35.0% | |
| ACACGAGTATGATGGTAAAT+GGG | - | chr3.1:83827851-83827870 | MS.gene014910:CDS | 35.0% | |
| ACAGCAAATCTGAGTTGTTA+GGG | + | chr3.1:83828560-83828579 | None:intergenic | 35.0% | |
| ACGAATCAGATAATCTTCGA+TGG | - | chr3.1:83826548-83826567 | MS.gene014910:CDS | 35.0% | |
| ACTTGATGCCAAAAATGCTA+AGG | - | chr3.1:83827268-83827287 | MS.gene014910:intron | 35.0% | |
| AGAAGATCAATGACGAGTAT+CGG | - | chr3.1:83827300-83827319 | MS.gene014910:intron | 35.0% | |
| AGAGCAAACATTGTACCAAA+TGG | + | chr3.1:83828882-83828901 | None:intergenic | 35.0% | |
| AGGATAGTGCAGAAAATCTT+GGG | - | chr3.1:83826904-83826923 | MS.gene014910:CDS | 35.0% | |
| AGTGTTAAACACGAGTATGA+TGG | - | chr3.1:83827843-83827862 | MS.gene014910:CDS | 35.0% | |
| ATAAAATGAGTACGGAAGCT+GGG | + | chr3.1:83826853-83826872 | None:intergenic | 35.0% | |
| ATGATTGTTCTCTTCCTTTC+GGG | - | chr3.1:83828408-83828427 | MS.gene014910:intron | 35.0% | |
| ATTTGGTACAATGTTTGCTC+TGG | - | chr3.1:83828881-83828900 | MS.gene014910:intron | 35.0% | |
| CAATAGAGAACCAGTGAATT+TGG | + | chr3.1:83828377-83828396 | None:intergenic | 35.0% | |
| CACATCTCTATGATACTTGA+CGG | + | chr3.1:83827666-83827685 | None:intergenic | 35.0% | |
| CCACAAATGTGTAATGTTGT+GGG | - | chr3.1:83827236-83827255 | MS.gene014910:intron | 35.0% | |
| CGCTTGTACAAAATGTTCAA+AGG | - | chr3.1:83828741-83828760 | MS.gene014910:intron | 35.0% | |
| CGTTATACTTTGCAATGTCA+CGG | + | chr3.1:83828467-83828486 | None:intergenic | 35.0% | |
| GTGTAGTTAGGAATAGATGT+TGG | - | chr3.1:83826512-83826531 | MS.gene014910:CDS | 35.0% | |
| TAAGTTCCACATGTGTAGTT+AGG | - | chr3.1:83826500-83826519 | MS.gene014910:CDS | 35.0% | |
| TCAATGAAAACAGCTCCAAA+TGG | + | chr3.1:83829077-83829096 | None:intergenic | 35.0% | |
| TCTATTCCTAACTACACATG+TGG | + | chr3.1:83826509-83826528 | None:intergenic | 35.0% | |
| TGAATGATGACCAAATTCAC+TGG | - | chr3.1:83828364-83828383 | MS.gene014910:intron | 35.0% | |
| TGCATAGAATCCAATAGTAC+CGG | + | chr3.1:83829408-83829427 | None:intergenic | 35.0% | |
| TTATGGGAACAACTAAAGGA+AGG | + | chr3.1:83827443-83827462 | None:intergenic | 35.0% | |
| TTGTGGTCATAAACTTGATC+TGG | - | chr3.1:83826719-83826738 | MS.gene014910:CDS | 35.0% | |
| TTTAGCCAACTTTGATTGCA+CGG | - | chr3.1:83826440-83826459 | MS.gene014910:CDS | 35.0% | |
| ! | AAACTGATTCAACCAGATTG+AGG | + | chr3.1:83829117-83829136 | None:intergenic | 35.0% |
| ! | ACTATCCTGTATCTTTTTGG+GGG | + | chr3.1:83826892-83826911 | None:intergenic | 35.0% |
| ! | ATCCTGATCATTCCGTTTTA+TGG | + | chr3.1:83827460-83827479 | None:intergenic | 35.0% |
| ! | CACTATCCTGTATCTTTTTG+GGG | + | chr3.1:83826893-83826912 | None:intergenic | 35.0% |
| ! | CGTTTTATGGGAACAACTAA+AGG | + | chr3.1:83827447-83827466 | None:intergenic | 35.0% |
| ! | GCACTATCCTGTATCTTTTT+GGG | + | chr3.1:83826894-83826913 | None:intergenic | 35.0% |
| ! | GTGTCAGCCATATTTTACTT+TGG | - | chr3.1:83829344-83829363 | MS.gene014910:intron | 35.0% |
| ! | GTTTTCATGGGAATATTTGC+TGG | - | chr3.1:83828705-83828724 | MS.gene014910:intron | 35.0% |
| ! | GTTTTTGTGGGTAGCTATAT+TGG | - | chr3.1:83828936-83828955 | MS.gene014910:intron | 35.0% |
| ! | TCCTGATCATTCCGTTTTAT+GGG | + | chr3.1:83827459-83827478 | None:intergenic | 35.0% |
| ! | TCTAGAATCCTGCAAATGAT+AGG | + | chr3.1:83827417-83827436 | None:intergenic | 35.0% |
| ! | TGCACTATCCTGTATCTTTT+TGG | + | chr3.1:83826895-83826914 | None:intergenic | 35.0% |
| ! | TTGGATTCTATGCATGCTTT+TGG | - | chr3.1:83829414-83829433 | MS.gene014910:CDS | 35.0% |
| !! | ACCATGATATTTGCTATCCT+TGG | - | chr3.1:83828627-83828646 | MS.gene014910:CDS | 35.0% |
| !! | CACATATGATGTTGATTTCC+AGG | - | chr3.1:83827977-83827996 | MS.gene014910:intron | 35.0% |
| !! | CATATTGTTTTGTAGCACCA+TGG | - | chr3.1:83827539-83827558 | MS.gene014910:CDS | 35.0% |
| !! | CCATGATATTTGCTATCCTT+GGG | - | chr3.1:83828628-83828647 | MS.gene014910:CDS | 35.0% |
| !! | CTCTGGTCTTTTTATGGTTT+GGG | - | chr3.1:83828898-83828917 | MS.gene014910:intron | 35.0% |
| !! | GATTTGCTGTGTGTTTATGT+TGG | - | chr3.1:83828570-83828589 | MS.gene014910:CDS | 35.0% |
| !! | GGGATTTTGTTTGTTTTCAC+AGG | + | chr3.1:83828987-83829006 | None:intergenic | 35.0% |
| !! | TGTTTGCTCTGGTCTTTTTA+TGG | - | chr3.1:83828892-83828911 | MS.gene014910:intron | 35.0% |
| !! | TTATTATCCGCTTTTGCCTT+TGG | - | chr3.1:83828282-83828301 | MS.gene014910:intron | 35.0% |
| !!! | AGCTTCTTATGCGTTTTTTG+TGG | - | chr3.1:83829379-83829398 | MS.gene014910:CDS | 35.0% |
| !!! | GGAACAGGTGTTCAATTTTT+TGG | - | chr3.1:83828591-83828610 | MS.gene014910:CDS | 35.0% |
| !!! | TATGCGTTTTTTGTGGTTAC+CGG | - | chr3.1:83829386-83829405 | MS.gene014910:CDS | 35.0% |
| !!! | TCAGTTCCACTTGTTTTTGT+GGG | - | chr3.1:83828924-83828943 | MS.gene014910:intron | 35.0% |
| AACCACATTTGCAGAGTTGA+TGG | - | chr3.1:83827067-83827086 | MS.gene014910:CDS | 40.0% | |
| AACTGAATCTGCTAGAATCG+TGG | - | chr3.1:83827688-83827707 | MS.gene014910:intron | 40.0% | |
| AATGTAATGCAGCTATCTGC+TGG | - | chr3.1:83826653-83826672 | MS.gene014910:CDS | 40.0% | |
| ACAAACCGTGCAATCAAAGT+TGG | + | chr3.1:83826448-83826467 | None:intergenic | 40.0% | |
| ACTGAATCTGCTAGAATCGT+GGG | - | chr3.1:83827689-83827708 | MS.gene014910:intron | 40.0% | |
| AGCAAATCTGAGTTGTTAGG+GGG | + | chr3.1:83828558-83828577 | None:intergenic | 40.0% | |
| ATGGAAACCAAGCTGATAGA+CGG | + | chr3.1:83827487-83827506 | None:intergenic | 40.0% | |
| ATTGGGGGAATACTTCCATT+TGG | - | chr3.1:83829059-83829078 | MS.gene014910:intron | 40.0% | |
| ATTGGTGTGAGGGTTGAAAT+TGG | - | chr3.1:83828084-83828103 | MS.gene014910:intron | 40.0% | |
| CAAGCTTGAAATCACAAAGC+TGG | - | chr3.1:83829322-83829341 | MS.gene014910:intron | 40.0% | |
| CAATCAAAACAGAGAAGGCT+GGG | + | chr3.1:83829043-83829062 | None:intergenic | 40.0% | |
| CACAGCAAATCTGAGTTGTT+AGG | + | chr3.1:83828561-83828580 | None:intergenic | 40.0% | |
| CAGCAAATCTGAGTTGTTAG+GGG | + | chr3.1:83828559-83828578 | None:intergenic | 40.0% | |
| CAGGATAGTGCAGAAAATCT+TGG | - | chr3.1:83826903-83826922 | MS.gene014910:CDS | 40.0% | |
| CCCAAGGATAGCAAATATCA+TGG | + | chr3.1:83828631-83828650 | None:intergenic | 40.0% | |
| CCCACAACATTACACATTTG+TGG | + | chr3.1:83827239-83827258 | None:intergenic | 40.0% | |
| CGCTCCACAAGATTTCTTTA+AGG | - | chr3.1:83826124-83826143 | MS.gene014910:CDS | 40.0% | |
| CGGTAAATGCCAAATGATTG+TGG | + | chr3.1:83827646-83827665 | None:intergenic | 40.0% | |
| CTGTGTGTTTATGTTGGAAC+AGG | - | chr3.1:83828576-83828595 | MS.gene014910:CDS | 40.0% | |
| GAAGATCAATGACGAGTATC+GGG | - | chr3.1:83827301-83827320 | MS.gene014910:intron | 40.0% | |
| GCCACAAATGTGTAATGTTG+TGG | - | chr3.1:83827235-83827254 | MS.gene014910:intron | 40.0% | |
| GGAACAGTTAACCTCTGAAT+TGG | - | chr3.1:83827042-83827061 | MS.gene014910:CDS | 40.0% | |
| GGATAGTGCAGAAAATCTTG+GGG | - | chr3.1:83826905-83826924 | MS.gene014910:CDS | 40.0% | |
| GGATGATGAAGACCAAAAAG+AGG | + | chr3.1:83829157-83829176 | None:intergenic | 40.0% | |
| GTTTCCATGTTGGACTCAAA+GGG | - | chr3.1:83827499-83827518 | MS.gene014910:intron | 40.0% | |
| TAGCTACCCACAAAAACAAG+TGG | + | chr3.1:83828933-83828952 | None:intergenic | 40.0% | |
| TATCAGCTTGGTTTCCATGT+TGG | - | chr3.1:83827489-83827508 | MS.gene014910:intron | 40.0% | |
| TCAAGAAGTTGAAGAGAGCA+AGG | - | chr3.1:83827944-83827963 | MS.gene014910:intron | 40.0% | |
| TCCCATAAAACGGAATGATC+AGG | - | chr3.1:83827455-83827474 | MS.gene014910:intron | 40.0% | |
| TCTTTATCCTCACCTCAATC+TGG | - | chr3.1:83829102-83829121 | MS.gene014910:intron | 40.0% | |
| TGGGTAATCGCTCATTAACT+TGG | - | chr3.1:83827087-83827106 | MS.gene014910:CDS | 40.0% | |
| TTCACAGGATTCTCAATTGC+AGG | + | chr3.1:83828972-83828991 | None:intergenic | 40.0% | |
| TTGATATACGGAGGATTGTG+AGG | - | chr3.1:83826367-83826386 | MS.gene014910:CDS | 40.0% | |
| TTGCTCTCTTCAACTTCTTG+AGG | + | chr3.1:83827945-83827964 | None:intergenic | 40.0% | |
| TTGTCCATGGGGATGTATTT+AGG | - | chr3.1:83828532-83828551 | MS.gene014910:intron | 40.0% | |
| TTTCAGCACAAGTGACAACA+AGG | + | chr3.1:83829178-83829197 | None:intergenic | 40.0% | |
| TTTGTGGTTACCGGTACTAT+TGG | - | chr3.1:83829395-83829414 | MS.gene014910:CDS | 40.0% | |
| ! | ACCACATTTGCAGAGTTGAT+GGG | - | chr3.1:83827068-83827087 | MS.gene014910:CDS | 40.0% |
| ! | ATTTGGGGCCAAAAATCATC+TGG | - | chr3.1:83828849-83828868 | MS.gene014910:intron | 40.0% |
| ! | CAGCTTTGTGATTTCAAGCT+TGG | + | chr3.1:83829324-83829343 | None:intergenic | 40.0% |
| ! | CATACATGAATTAGGCACTG+AGG | - | chr3.1:83828059-83828078 | MS.gene014910:CDS | 40.0% |
| ! | GTTGAAATTGGTCTGTCGTT+TGG | - | chr3.1:83828096-83828115 | MS.gene014910:intron | 40.0% |
| !! | CATCTTTGGGTTCCTCTTTT+TGG | - | chr3.1:83829142-83829161 | MS.gene014910:intron | 40.0% |
| !! | CTATACCCTGTGCTTTAGAA+TGG | - | chr3.1:83828029-83828048 | MS.gene014910:CDS | 40.0% |
| !! | GAATTAGGCACTGAGGTAAT+TGG | - | chr3.1:83828066-83828085 | MS.gene014910:CDS | 40.0% |
| !! | GCTCTGGTCTTTTTATGGTT+TGG | - | chr3.1:83828897-83828916 | MS.gene014910:intron | 40.0% |
| !! | TGGTTTTGCCTATCATTTGC+AGG | - | chr3.1:83827406-83827425 | MS.gene014910:intron | 40.0% |
| !!! | AGCCTTCTCTGTTTTGATTG+GGG | - | chr3.1:83829043-83829062 | MS.gene014910:intron | 40.0% |
| !!! | ATGCATGCTTTTGGTTCACA+AGG | - | chr3.1:83829423-83829442 | MS.gene014910:CDS | 40.0% |
| !!! | CAGCCTTCTCTGTTTTGATT+GGG | - | chr3.1:83829042-83829061 | MS.gene014910:intron | 40.0% |
| !!! | CTCAGTTCCACTTGTTTTTG+TGG | - | chr3.1:83828923-83828942 | MS.gene014910:intron | 40.0% |
| !!! | CTCTTGGTTTGGGTTTTCAT+GGG | - | chr3.1:83828693-83828712 | MS.gene014910:CDS | 40.0% |
| AACGAATGTACAGAGCAAGG+AGG | - | chr3.1:83827607-83827626 | MS.gene014910:CDS | 45.0% | |
| AATCTTGGGGAAGTTCTTCG+TGG | - | chr3.1:83826918-83826937 | MS.gene014910:CDS | 45.0% | |
| ACAACTGTGTGCTTAGCATG+AGG | + | chr3.1:83827909-83827928 | None:intergenic | 45.0% | |
| ACCCATCAACTCTGCAAATG+TGG | + | chr3.1:83827072-83827091 | None:intergenic | 45.0% | |
| AGAGACAATTGCAGGGAACA+AGG | + | chr3.1:83828802-83828821 | None:intergenic | 45.0% | |
| AGGGTCACATGTTGTCAAAC+GGG | + | chr3.1:83827889-83827908 | None:intergenic | 45.0% | |
| AGTAATCCTCACTGCACAAC+TGG | + | chr3.1:83829223-83829242 | None:intergenic | 45.0% | |
| AGTGGAAAAGAATTGCCCTC+AGG | - | chr3.1:83828769-83828788 | MS.gene014910:intron | 45.0% | |
| ATAGCAGCCAAAGGCAAAAG+CGG | + | chr3.1:83828292-83828311 | None:intergenic | 45.0% | |
| CAACTGTGTGCTTAGCATGA+GGG | + | chr3.1:83827908-83827927 | None:intergenic | 45.0% | |
| CACTGAGGTAATTGGTGTGA+GGG | - | chr3.1:83828074-83828093 | MS.gene014910:intron | 45.0% | |
| CCAATCAAAACAGAGAAGGC+TGG | + | chr3.1:83829044-83829063 | None:intergenic | 45.0% | |
| CTGAACGAATGTACAGAGCA+AGG | - | chr3.1:83827604-83827623 | MS.gene014910:CDS | 45.0% | |
| CTTCCAACCAGTCTCTTCTT+GGG | + | chr3.1:83828511-83828530 | None:intergenic | 45.0% | |
| GAAAACCCAAACCAAGAGCA+TGG | + | chr3.1:83828691-83828710 | None:intergenic | 45.0% | |
| GAGGGTCACATGTTGTCAAA+CGG | + | chr3.1:83827890-83827909 | None:intergenic | 45.0% | |
| GATTCAACCAGATTGAGGTG+AGG | + | chr3.1:83829112-83829131 | None:intergenic | 45.0% | |
| GATTCTACCGTCTATCAGCT+TGG | - | chr3.1:83827477-83827496 | MS.gene014910:intron | 45.0% | |
| GGTTTCCATGTTGGACTCAA+AGG | - | chr3.1:83827498-83827517 | MS.gene014910:intron | 45.0% | |
| TATCAGCTCATAAGCTCACC+TGG | + | chr3.1:83827998-83828017 | None:intergenic | 45.0% | |
| TCCCCCAATCAAAACAGAGA+AGG | + | chr3.1:83829048-83829067 | None:intergenic | 45.0% | |
| TGTGCAGTGAGGATTACTTG+TGG | - | chr3.1:83829225-83829244 | MS.gene014910:intron | 45.0% | |
| ! | ATGTGAAGTGGGCTTCAAGA+TGG | - | chr3.1:83828325-83828344 | MS.gene014910:intron | 45.0% |
| ! | GAAATTGGTCTGTCGTTTGG+CGG | - | chr3.1:83828099-83828118 | MS.gene014910:intron | 45.0% |
| ! | GCACAGCTCCAGATGATTTT+TGG | + | chr3.1:83828860-83828879 | None:intergenic | 45.0% |
| ! | TGTGAAGTGGGCTTCAAGAT+GGG | - | chr3.1:83828326-83828345 | MS.gene014910:intron | 45.0% |
| !! | ATCTTTTTGGGGGCAGGATA+AGG | + | chr3.1:83826882-83826901 | None:intergenic | 45.0% |
| !! | GCTTTGAGGTTAAGCCATTC+AGG | - | chr3.1:83827711-83827730 | MS.gene014910:intron | 45.0% |
| !!! | CCAGCCTTCTCTGTTTTGAT+TGG | - | chr3.1:83829041-83829060 | MS.gene014910:intron | 45.0% |
| !!! | GCCTTCTCTGTTTTGATTGG+GGG | - | chr3.1:83829044-83829063 | MS.gene014910:intron | 45.0% |
| !!! | GCTCTTGGTTTGGGTTTTCA+TGG | - | chr3.1:83828692-83828711 | MS.gene014910:CDS | 45.0% |
| AAGCCCAAGAAGAGACTGGT+TGG | - | chr3.1:83828505-83828524 | MS.gene014910:intron | 50.0% | |
| ACTCAAAGGGCAGTATACCG+GGG | - | chr3.1:83827512-83827531 | MS.gene014910:intron | 50.0% | |
| ACTGCCCTTTGAGTCCAACA+TGG | + | chr3.1:83827506-83827525 | None:intergenic | 50.0% | |
| ACTGGTTGGAAGCTTGTCCA+TGG | - | chr3.1:83828519-83828538 | MS.gene014910:intron | 50.0% | |
| AGAAGGAGAAAGCGGTGTGA+AGG | + | chr3.1:83826091-83826110 | None:intergenic | 50.0% | |
| CTACTTCCAGTTGTGCAGTG+AGG | - | chr3.1:83829214-83829233 | MS.gene014910:intron | 50.0% | |
| CTCTTCTTGGGCTTCTTCCT+GGG | + | chr3.1:83828499-83828518 | None:intergenic | 50.0% | |
| CTGGAAGTAGCAGAGCACAA+TGG | + | chr3.1:83829204-83829223 | None:intergenic | 50.0% | |
| CTGGTTGGAAGCTTGTCCAT+GGG | - | chr3.1:83828520-83828539 | MS.gene014910:intron | 50.0% | |
| GAACAAGGTTGCAGTCCTGA+GGG | + | chr3.1:83828787-83828806 | None:intergenic | 50.0% | |
| GAAGAAGCCCAAGAAGAGAC+TGG | - | chr3.1:83828501-83828520 | MS.gene014910:intron | 50.0% | |
| GACAGCCATGCTCTTGGTTT+GGG | - | chr3.1:83828683-83828702 | MS.gene014910:CDS | 50.0% | |
| GACTCAAAGGGCAGTATACC+GGG | - | chr3.1:83827511-83827530 | MS.gene014910:intron | 50.0% | |
| GCACTGAGGTAATTGGTGTG+AGG | - | chr3.1:83828073-83828092 | MS.gene014910:intron | 50.0% | |
| GCAGGAGAGTGATGTGAAGT+GGG | - | chr3.1:83828314-83828333 | MS.gene014910:intron | 50.0% | |
| GCAGTGAGGATTACTTGTGG+TGG | - | chr3.1:83829228-83829247 | MS.gene014910:intron | 50.0% | |
| GCTTCCAACCAGTCTCTTCT+TGG | + | chr3.1:83828512-83828531 | None:intergenic | 50.0% | |
| GCTTTCTCCTTCTACCTTCC+CGG | - | chr3.1:83826098-83826117 | MS.gene014910:CDS | 50.0% | |
| GGACTCAAAGGGCAGTATAC+CGG | - | chr3.1:83827510-83827529 | MS.gene014910:intron | 50.0% | |
| GGGAAGGTAGAAGGAGAAAG+CGG | + | chr3.1:83826099-83826118 | None:intergenic | 50.0% | |
| GGTTCCTCTCTCCTTCAAAC+CGG | - | chr3.1:83828649-83828668 | MS.gene014910:CDS | 50.0% | |
| GTATAACGAGCTTGAGACCC+AGG | - | chr3.1:83828479-83828498 | MS.gene014910:intron | 50.0% | |
| GTGAGGATTACTTGTGGTGG+TGG | - | chr3.1:83829231-83829250 | MS.gene014910:intron | 50.0% | |
| GTGCGGAAGAACCAGAAGTA+AGG | + | chr3.1:83829265-83829284 | None:intergenic | 50.0% | |
| GTTCCTCTCTCCTTCAAACC+GGG | - | chr3.1:83828650-83828669 | MS.gene014910:CDS | 50.0% | |
| TCCTGCCCCCAAAAAGATAC+AGG | - | chr3.1:83826884-83826903 | MS.gene014910:CDS | 50.0% | |
| TCTCTTCTTGGGCTTCTTCC+TGG | + | chr3.1:83828500-83828519 | None:intergenic | 50.0% | |
| TGACAGCCATGCTCTTGGTT+TGG | - | chr3.1:83828682-83828701 | MS.gene014910:CDS | 50.0% | |
| TGCAGGAGAGTGATGTGAAG+TGG | - | chr3.1:83828313-83828332 | MS.gene014910:intron | 50.0% | |
| TGCTAGAATCGTGGGCTTTG+AGG | - | chr3.1:83827697-83827716 | MS.gene014910:intron | 50.0% | |
| TGGCGGTCATACCTTACTTC+TGG | - | chr3.1:83829251-83829270 | MS.gene014910:intron | 50.0% | |
| TGGTTGGAAGCTTGTCCATG+GGG | - | chr3.1:83828521-83828540 | MS.gene014910:intron | 50.0% | |
| TGTTCTCTTCCTTTCGGGCA+TGG | - | chr3.1:83828413-83828432 | MS.gene014910:intron | 50.0% | |
| TTCCTCTCTCCTTCAAACCG+GGG | - | chr3.1:83828651-83828670 | MS.gene014910:CDS | 50.0% | |
| TTGAAGGAGAGAGGAACCCA+AGG | + | chr3.1:83828647-83828666 | None:intergenic | 50.0% | |
| ! | TCATCTGGAGCTGTGCCATT+TGG | - | chr3.1:83828864-83828883 | MS.gene014910:intron | 50.0% |
| !! | AGGATTACTTGTGGTGGTGG+CGG | - | chr3.1:83829234-83829253 | MS.gene014910:intron | 50.0% |
| !! | TCCTGTATCTTTTTGGGGGC+AGG | + | chr3.1:83826888-83826907 | None:intergenic | 50.0% |
| AAATCTTGTGGAGCGACGCC+GGG | + | chr3.1:83826119-83826138 | None:intergenic | 55.0% | |
| CTCCTGCAGATAGCAGCCAA+AGG | + | chr3.1:83828301-83828320 | None:intergenic | 55.0% | |
| GAAATCTTGTGGAGCGACGC+CGG | + | chr3.1:83826120-83826139 | None:intergenic | 55.0% | |
| GAAGGCTGGGTTCATGTACC+AGG | + | chr3.1:83829030-83829049 | None:intergenic | 55.0% | |
| GCTCATGACAGCCATGCTCT+TGG | - | chr3.1:83828677-83828696 | MS.gene014910:CDS | 55.0% | |
| GGAACAAGGTTGCAGTCCTG+AGG | + | chr3.1:83828788-83828807 | None:intergenic | 55.0% | |
| GGGGCCTAAATACATCCCCA+TGG | + | chr3.1:83828539-83828558 | None:intergenic | 55.0% | |
| TCATGTACCAGGCCTGCTCA+GGG | + | chr3.1:83829019-83829038 | None:intergenic | 55.0% | |
| TCATTGCCACCATGCCCGAA+AGG | + | chr3.1:83828425-83828444 | None:intergenic | 55.0% | |
| TCTCTCCTTCAAACCGGGGT+GGG | - | chr3.1:83828655-83828674 | MS.gene014910:CDS | 55.0% | |
| TCTCTTCCTTTCGGGCATGG+TGG | - | chr3.1:83828416-83828435 | MS.gene014910:intron | 55.0% | |
| TGCCTTTGGCTGCTATCTGC+AGG | - | chr3.1:83828296-83828315 | MS.gene014910:intron | 55.0% | |
| TTCATGTACCAGGCCTGCTC+AGG | + | chr3.1:83829020-83829039 | None:intergenic | 55.0% | |
| CCTGCTCAGGGATCTGCCTT+GGG | + | chr3.1:83829007-83829026 | None:intergenic | 60.0% | |
| CTCTCTCCTTCAAACCGGGG+TGG | - | chr3.1:83828654-83828673 | MS.gene014910:CDS | 60.0% | |
| ! | ATGAGCCCACCCCGGTTTGA+AGG | + | chr3.1:83828663-83828682 | None:intergenic | 60.0% |
| ! | CACCCCGGTTTGAAGGAGAG+AGG | + | chr3.1:83828656-83828675 | None:intergenic | 60.0% |
| AGCGACGCCGGGAAGGTAGA+AGG | + | chr3.1:83826108-83826127 | None:intergenic | 65.0% | |
| CCCAAGGCAGATCCCTGAGC+AGG | - | chr3.1:83829004-83829023 | MS.gene014910:intron | 65.0% | |
| GCCTGCTCAGGGATCTGCCT+TGG | + | chr3.1:83829008-83829027 | None:intergenic | 65.0% | |
| TGGCTGTCATGAGCCCACCC+CGG | + | chr3.1:83828671-83828690 | None:intergenic | 65.0% | |
| CTTGTGGAGCGACGCCGGGA+AGG | + | chr3.1:83826115-83826134 | None:intergenic | 70.0% | |
| GGCAGATCCCTGAGCAGGCC+TGG | - | chr3.1:83829009-83829028 | MS.gene014910:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 83826041 | 83829475 | 83826041 | ID=MS.gene014910 |
| chr3.1 | mRNA | 83826041 | 83829475 | 83826041 | ID=MS.gene014910.t1;Parent=MS.gene014910 |
| chr3.1 | exon | 83829371 | 83829475 | 83829371 | ID=MS.gene014910.t1.exon1;Parent=MS.gene014910.t1 |
| chr3.1 | CDS | 83829371 | 83829475 | 83829371 | ID=cds.MS.gene014910.t1;Parent=MS.gene014910.t1 |
| chr3.1 | exon | 83828548 | 83828712 | 83828548 | ID=MS.gene014910.t1.exon2;Parent=MS.gene014910.t1 |
| chr3.1 | CDS | 83828548 | 83828712 | 83828548 | ID=cds.MS.gene014910.t1;Parent=MS.gene014910.t1 |
| chr3.1 | exon | 83828186 | 83828295 | 83828186 | ID=MS.gene014910.t1.exon3;Parent=MS.gene014910.t1 |
| chr3.1 | CDS | 83828186 | 83828295 | 83828186 | ID=cds.MS.gene014910.t1;Parent=MS.gene014910.t1 |
| chr3.1 | exon | 83827983 | 83828088 | 83827983 | ID=MS.gene014910.t1.exon4;Parent=MS.gene014910.t1 |
| chr3.1 | CDS | 83827983 | 83828088 | 83827983 | ID=cds.MS.gene014910.t1;Parent=MS.gene014910.t1 |
| chr3.1 | exon | 83827784 | 83827896 | 83827784 | ID=MS.gene014910.t1.exon5;Parent=MS.gene014910.t1 |
| chr3.1 | CDS | 83827784 | 83827896 | 83827784 | ID=cds.MS.gene014910.t1;Parent=MS.gene014910.t1 |
| chr3.1 | exon | 83827518 | 83827671 | 83827518 | ID=MS.gene014910.t1.exon6;Parent=MS.gene014910.t1 |
| chr3.1 | CDS | 83827518 | 83827671 | 83827518 | ID=cds.MS.gene014910.t1;Parent=MS.gene014910.t1 |
| chr3.1 | exon | 83826041 | 83827198 | 83826041 | ID=MS.gene014910.t1.exon7;Parent=MS.gene014910.t1 |
| chr3.1 | CDS | 83826041 | 83827198 | 83826041 | ID=cds.MS.gene014910.t1;Parent=MS.gene014910.t1 |
| Gene Sequence |
| Protein sequence |
