AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36990.t1 MTR_8g016270 99.383 648 4 0 1 648 1 648 0.0 1335
MS.gene36990.t1 MTR_3g105950 77.110 616 139 2 34 648 22 636 0.0 974
MS.gene36990.t1 MTR_1g014080 75.118 635 155 3 16 648 4 637 0.0 971
MS.gene36990.t1 MTR_5g098730 44.597 657 306 14 30 648 29 665 1.25e-178 523
MS.gene36990.t1 MTR_3g082140 43.049 669 318 14 20 648 14 659 2.06e-175 514
MS.gene36990.t1 MTR_0204s0010 48.035 458 214 7 204 648 2 448 7.03e-150 441
MS.gene36990.t1 MTR_6g074910 33.550 614 349 8 43 648 26 588 3.38e-119 367
MS.gene36990.t1 MTR_5g077170 32.951 610 356 8 45 648 29 591 1.74e-112 350
MS.gene36990.t1 MTR_2g006300 32.630 616 350 10 43 648 23 583 2.76e-96 308
MS.gene36990.t1 MTR_8g088730 33.119 622 345 11 41 648 25 589 3.52e-96 307
MS.gene36990.t1 MTR_4g053270 30.542 609 364 10 45 646 31 587 7.74e-91 293
MS.gene36990.t1 MTR_7g060560 60.169 118 46 1 102 219 273 389 5.63e-37 142
MS.gene36990.t1 MTR_3g090510 61.468 109 41 1 111 219 285 392 1.80e-35 138
MS.gene36990.t1 MTR_4g116770 40.541 185 99 4 24 206 13 188 3.00e-33 136
MS.gene36990.t1 MTR_5g014340 54.206 107 43 2 105 211 1 101 7.27e-21 92.8
MS.gene36990.t1 MTR_0249s0060 57.971 69 28 1 105 173 1 68 5.16e-14 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36990.t1 AT3G13772 88.961 616 68 0 33 648 26 641 0.0 1163
MS.gene36990.t1 AT1G55130 83.412 639 103 2 10 648 2 637 0.0 1129
MS.gene36990.t1 AT5G25100 75.000 628 152 3 25 648 18 644 0.0 981
MS.gene36990.t1 AT2G24170 75.040 629 152 3 24 648 10 637 0.0 977
MS.gene36990.t1 AT5G10840 73.981 638 162 4 13 648 13 648 0.0 976
MS.gene36990.t1 AT5G25100 74.173 635 152 4 25 648 18 651 0.0 974
MS.gene36990.t1 AT2G24170 69.248 439 131 3 20 455 7 444 0.0 644
MS.gene36990.t1 AT5G35160 45.210 668 309 14 20 648 9 658 0.0 550
MS.gene36990.t1 AT5G35160 45.210 668 309 14 20 648 9 658 0.0 550
MS.gene36990.t1 AT5G35160 45.210 668 309 14 20 648 9 658 0.0 550
MS.gene36990.t1 AT5G35160 43.178 667 296 14 20 648 9 630 5.82e-173 507
MS.gene36990.t1 AT4G12650 43.137 663 323 13 22 648 8 652 3.37e-172 506
MS.gene36990.t1 AT2G01970 34.591 636 357 8 24 648 5 592 3.07e-125 383
MS.gene36990.t1 AT5G37310 34.321 641 351 11 23 648 8 593 2.11e-120 370
MS.gene36990.t1 AT5G37310 34.321 641 351 11 23 648 8 593 2.11e-120 370
MS.gene36990.t1 AT1G14670 33.959 639 367 8 16 648 3 592 8.95e-117 361
MS.gene36990.t1 AT1G08350 30.146 617 370 10 41 648 25 589 7.85e-103 325
MS.gene36990.t1 AT1G08350 30.146 617 370 10 41 648 25 589 7.85e-103 325
MS.gene36990.t1 AT1G10950 33.766 616 343 10 43 648 29 589 1.70e-99 316
MS.gene36990.t1 AT1G08350 29.875 559 332 9 98 648 2 508 5.34e-90 289
MS.gene36990.t1 AT1G08350 29.204 565 330 10 41 596 25 528 4.17e-86 280

Find 166 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATATGATGTTTCCTTTA+AGG 0.044878 8.2:+76816573 MS.gene36990:CDS
TGTGAACAGTGCAGAAAATT+TGG 0.158327 8.2:+76815275 MS.gene36990:CDS
TGATTGCTCTAGTGTGTTTA+TGG 0.159017 8.2:+76817257 MS.gene36990:CDS
TTTAATCAGCAATACCTTAA+AGG 0.196435 8.2:-76816587 None:intergenic
GGTACTGGTGTTCAGATATT+TGG 0.220183 8.2:+76816956 MS.gene36990:CDS
CATTCCACTCCTTGTATTCA+TGG 0.232106 8.2:-76816450 None:intergenic
TTGTGCTGAATGCTTTGATC+TGG 0.244839 8.2:+76817197 MS.gene36990:CDS
TGTTGCTTGCCATACAATTT+TGG 0.253734 8.2:+76815483 MS.gene36990:CDS
AACCAGTTCTACTACATCTT+TGG 0.285370 8.2:+76817493 MS.gene36990:CDS
TTCACAGGGTCTTCAATTGC+TGG 0.298618 8.2:-76817334 None:intergenic
TTGGCTTCTATGCTTGCTTC+TGG 0.307454 8.2:+76817779 MS.gene36990:CDS
CAAAGCAAATTTGAATTGAT+TGG 0.317059 8.2:-76816923 None:intergenic
TCCTCTGGGGCAGTTCCCTT+TGG 0.325164 8.2:+76817229 MS.gene36990:CDS
GAATTGAACATGCAGGGTTT+TGG 0.326292 8.2:+76815706 MS.gene36990:intron
TCTTTATCCTGACATCAATA+TGG 0.327876 8.2:+76817467 MS.gene36990:CDS
GTGAACAGTGCAGAAAATTT+GGG 0.330941 8.2:+76815276 MS.gene36990:CDS
TGCACTGTTCACAATCTTAG+AGG 0.332330 8.2:-76815265 None:intergenic
ATACGAGCAGAACCAGTTTC+AGG 0.334998 8.2:-76815984 None:intergenic
ATCGGTACCCTTGGTCTTTG+TGG 0.335581 8.2:+76817288 MS.gene36990:CDS
AAAACTGCGTTTATGTTTCC+GGG 0.337956 8.2:+76817154 MS.gene36990:CDS
TCTCAGGCATCCTTTACTTT+GGG 0.341278 8.2:+76817710 MS.gene36990:CDS
GTCTCAGGCATCCTTTACTT+TGG 0.348613 8.2:+76817709 MS.gene36990:CDS
GTCCATTCCTTCTACCTTCC+CGG 0.352903 8.2:+76813938 MS.gene36990:CDS
TTCAGGAAAGTGAGATCAAA+TGG 0.354636 8.2:+76816678 MS.gene36990:intron
TGCTCGTATTGTTGGATTTG+AGG 0.356694 8.2:+76815998 MS.gene36990:CDS
TGTGTCTAGCTGGTTATAAT+TGG 0.360277 8.2:-76816840 None:intergenic
ATTGGTGGCATTCTTCCCTT+TGG 0.369375 8.2:+76817424 MS.gene36990:CDS
AGAAAATTGAGTAGAGGAAA+AGG 0.378567 8.2:-76817654 None:intergenic
CATTGAAAACTCAATATATA+CGG 0.380834 8.2:+76815320 MS.gene36990:CDS
GGTTCTTGTCTCCATCTAAT+CGG 0.384734 8.2:+76817014 MS.gene36990:CDS
TGTGCTGAATGCTTTGATCT+GGG 0.386011 8.2:+76817198 MS.gene36990:CDS
TTTGTTGTGACTGGAACAAT+TGG 0.391069 8.2:+76817760 MS.gene36990:CDS
GTCTTTGTGGGCAGTTACTT+AGG 0.396377 8.2:+76817301 MS.gene36990:CDS
GTGTTTATGGTTCGGTATAT+CGG 0.398070 8.2:+76817270 MS.gene36990:CDS
TATGCCTTCTTTGTTGTGAC+TGG 0.404522 8.2:+76817751 MS.gene36990:CDS
TCGGTACCCTTGGTCTTTGT+GGG 0.405523 8.2:+76817289 MS.gene36990:CDS
TTTCTACTTCTTTACCAAGT+TGG 0.406142 8.2:+76817672 MS.gene36990:CDS
GATGAGGCTCAAGAAGAAAC+AGG 0.406874 8.2:+76816866 MS.gene36990:CDS
ATAAGACCTCCCCGATTAGA+TGG 0.408883 8.2:-76817025 None:intergenic
ACTGGTTCTGCTCGTATTGT+TGG 0.410560 8.2:+76815990 MS.gene36990:CDS
TATCACAAGGATCCTGAAAC+TGG 0.411389 8.2:+76815972 MS.gene36990:CDS
TGGAGAGCTTACCTCACTGC+TGG 0.411972 8.2:+76817616 MS.gene36990:CDS
AGCAACGCCGGGAAGGTAGA+AGG 0.413416 8.2:-76813945 None:intergenic
CCTCATCTTGTGTGTCTAGC+TGG 0.414499 8.2:-76816850 None:intergenic
GTTCTTGTCTCCATCTAATC+GGG 0.422518 8.2:+76817015 MS.gene36990:CDS
GCTCTAGTGTGTTTATGGTT+CGG 0.422770 8.2:+76817262 MS.gene36990:CDS
TGTAGTCTTCACTGCACAAC+TGG 0.424133 8.2:-76817585 None:intergenic
AGCCAAAGATGTAGTAGAAC+TGG 0.429233 8.2:-76817495 None:intergenic
TCTCAGCACAGGTGATCAAT+AGG 0.430129 8.2:-76817540 None:intergenic
GGACGGAGGAGAAGAGGAAG+AGG 0.432621 8.2:-76813919 None:intergenic
CCCGTCTTCTCAATTCTGAT+TGG 0.435125 8.2:+76817406 MS.gene36990:CDS
GATCACCTGTGCTGAGATTA+CGG 0.439518 8.2:+76817546 MS.gene36990:CDS
GTCTTCTCAATTCTGATTGG+TGG 0.440448 8.2:+76817409 MS.gene36990:CDS
GACTGCAATGGTTCTACTGT+GGG 0.450898 8.2:+76817048 MS.gene36990:CDS
CTCAATAAACACTGCACCAA+AGG 0.453951 8.2:-76817440 None:intergenic
CTTTGTCTAAGAACAGCAAC+TGG 0.454994 8.2:-76815737 None:intergenic
CTTTGCGTTTATGTTGGTAC+TGG 0.455076 8.2:+76816941 MS.gene36990:CDS
TGTTTGTATCGACTTCTTGT+GGG 0.458929 8.2:-76816537 None:intergenic
CGTGTTCATATGTAGTAGAT+TGG 0.459577 8.2:-76815772 None:intergenic
TTCTTTCTTAGTTTCATATG+AGG 0.461376 8.2:+76815443 MS.gene36990:intron
GTCATGTACCATGCCTGCTC+AGG 0.462626 8.2:-76817382 None:intergenic
TTGTTTGTATCGACTTCTTG+TGG 0.464195 8.2:-76816538 None:intergenic
AGCAAATTTGAATTGATTGG+TGG 0.465043 8.2:-76816920 None:intergenic
TGCTGAATGCTTTGATCTGG+GGG 0.465420 8.2:+76817200 MS.gene36990:CDS
GAGATTACAAAGCTGGTCTC+AGG 0.477373 8.2:+76817694 MS.gene36990:CDS
GATTTGAGGTCACACCAAAC+AGG 0.478437 8.2:+76816012 MS.gene36990:CDS
TCCTAGGCAGGTACCTGAGC+AGG 0.480853 8.2:+76817369 MS.gene36990:CDS
CAATGATATTTGCTTTGCTA+GGG 0.485657 8.2:+76816993 MS.gene36990:CDS
GGTTTAGCCATATTGATGTC+AGG 0.485897 8.2:-76817474 None:intergenic
GTGCTGAATGCTTTGATCTG+GGG 0.486277 8.2:+76817199 MS.gene36990:CDS
TGAAGACTAATAAAATTCCT+AGG 0.489319 8.2:+76817353 MS.gene36990:CDS
TTTATTTGCTGGCTACTCCT+CGG 0.489528 8.2:+76817081 MS.gene36990:CDS
GACTAATAAAATTCCTAGGC+AGG 0.491913 8.2:+76817357 MS.gene36990:CDS
GGAAAAGAACAAGACCTGTT+TGG 0.492347 8.2:-76816026 None:intergenic
CAGTTGCTGTTCTTAGACAA+AGG 0.495185 8.2:+76815738 MS.gene36990:CDS
ACAGGGTGGAAACTTGTTCA+TGG 0.497622 8.2:+76816884 MS.gene36990:CDS
GAGGAGAGTGGTGAAGAAGA+CGG 0.498009 8.2:-76813900 None:intergenic
CAAGTTGGAGATTACAAAGC+TGG 0.498464 8.2:+76817687 MS.gene36990:CDS
ATTCAGCATCCAAAATTGTA+TGG 0.498469 8.2:-76815492 None:intergenic
AGGAATGGACGGAGGAGAAG+AGG 0.502352 8.2:-76813925 None:intergenic
TCAGATGAAGGAGAAGATGA+TGG 0.504918 8.2:+76813841 None:intergenic
ACGTTTGTACAAGATGTTCA+AGG 0.505523 8.2:+76817105 MS.gene36990:CDS
CAGTATTAACCATGAATACA+AGG 0.509635 8.2:+76816441 MS.gene36990:intron
CGCCGGGAAGGTAGAAGGAA+TGG 0.511317 8.2:-76813940 None:intergenic
GGTGGTTGAACGGACGGAGA+TGG 0.512558 8.2:-76813873 None:intergenic
GGATGATGAACACTATGAAA+AGG 0.515971 8.2:-76817519 None:intergenic
GGGTTCAAAGGAAACTATCA+AGG 0.516025 8.2:+76815806 MS.gene36990:CDS
ACAATGATATTTGCTTTGCT+AGG 0.516465 8.2:+76816992 MS.gene36990:CDS
CAGCTTTGTAATCTCCAACT+TGG 0.518191 8.2:-76817686 None:intergenic
CGCGAGGAGCAACGCCGGGA+AGG 0.518393 8.2:-76813952 None:intergenic
TCAGGAAAGTGAGATCAAAT+GGG 0.521155 8.2:+76816679 MS.gene36990:intron
GAAATCGCGAGGAGCAACGC+CGG 0.524038 8.2:-76813957 None:intergenic
TCAAGGGCACAGAGTGGAAG+AGG 0.526236 8.2:+76817122 MS.gene36990:CDS
AATTTGCTTTGCGTTTATGT+TGG 0.531771 8.2:+76816935 MS.gene36990:CDS
TGCTGTTCTTAGACAAAGGA+GGG 0.532038 8.2:+76815742 MS.gene36990:CDS
TCAATAAACACTGCACCAAA+GGG 0.532050 8.2:-76817439 None:intergenic
GGTGAAGAAGACGGTGGTGG+TGG 0.533961 8.2:-76813891 None:intergenic
GGAGAAGAGGAAGAGGAGAG+TGG 0.534040 8.2:-76813912 None:intergenic
AAATCGCGAGGAGCAACGCC+GGG 0.536110 8.2:-76813956 None:intergenic
GTTCGGTATATCGGTACCCT+TGG 0.538820 8.2:+76817279 MS.gene36990:CDS
TTATTGCATGTCGTTACCTG+TGG 0.538847 8.2:-76816481 None:intergenic
TTCTTAGTTTCATATGAGGA+AGG 0.543451 8.2:+76815447 MS.gene36990:intron
GCACTGTTCACAATCTTAGA+GGG 0.547351 8.2:-76815264 None:intergenic
AGAAGTAGAAAATTGAGTAG+AGG 0.548551 8.2:-76817660 None:intergenic
AATCATCAGAGAGTTAATGA+TGG 0.549853 8.2:-76816756 None:intergenic
TTATCATATACCCAAAGTAA+AGG 0.553962 8.2:-76817720 None:intergenic
AGAGCAATCATTGTTCCAAA+GGG 0.559187 8.2:-76817244 None:intergenic
GCCTGCTCAGGTACCTGCCT+AGG 0.559404 8.2:-76817370 None:intergenic
TTCAAGTAGTAGTAGTCATA+CGG 0.560270 8.2:-76815231 None:intergenic
TGTTCCAGTCACAACAAAGA+AGG 0.561147 8.2:-76817755 None:intergenic
GTCTAAGAACAGCAACTGGA+AGG 0.564984 8.2:-76815733 None:intergenic
TAGAGCAATCATTGTTCCAA+AGG 0.565492 8.2:-76817245 None:intergenic
TGTGCAGTGAAGACTACAAT+TGG 0.571119 8.2:+76817590 MS.gene36990:CDS
GGCAGGTACCTGAGCAGGCA+TGG 0.573677 8.2:+76817374 MS.gene36990:CDS
ACCAATCAGAATTGAGAAGA+CGG 0.577155 8.2:-76817407 None:intergenic
TGAATGATGATCAGATCCAC+TGG 0.579472 8.2:+76816729 MS.gene36990:CDS
CAGATGAAGGAGAAGATGAT+GGG 0.580777 8.2:+76813842 None:intergenic
GGAGAGCTTACCTCACTGCT+GGG 0.583273 8.2:+76817617 MS.gene36990:CDS
TGACTGCAATGGTTCTACTG+TGG 0.583445 8.2:+76817047 MS.gene36990:CDS
CGTTTGTACAAGATGTTCAA+GGG 0.585084 8.2:+76817106 MS.gene36990:CDS
TGTATGGCAAGCAACAGTAC+AGG 0.589011 8.2:-76815476 None:intergenic
CCAATCAGAATTGAGAAGAC+GGG 0.590171 8.2:-76817406 None:intergenic
ACATGACTCTAAAACTCAAG+TGG 0.591447 8.2:-76815950 None:intergenic
CACAACCGTAATCTCAGCAC+AGG 0.592033 8.2:-76817551 None:intergenic
AGACGGTGGTGGTGGTTGAA+CGG 0.593253 8.2:-76813883 None:intergenic
GGTGGTGGTGGTTGAACGGA+CGG 0.600564 8.2:-76813879 None:intergenic
AGTGGTGAAGAAGACGGTGG+TGG 0.602668 8.2:-76813894 None:intergenic
TGAACAGTGCAGAAAATTTG+GGG 0.603452 8.2:+76815277 MS.gene36990:CDS
GTGAGATCAAATGGGCATCA+CGG 0.603865 8.2:+76816687 MS.gene36990:CDS
GATCAAATGGGCATCACGGT+GGG 0.608304 8.2:+76816691 MS.gene36990:CDS
GTTCTTAGACAAAGGAGGGA+TGG 0.608774 8.2:+76815746 MS.gene36990:CDS
GAGAGTGGTGAAGAAGACGG+TGG 0.609885 8.2:-76813897 None:intergenic
AGTTAATGATGGAGAACCAG+TGG 0.613944 8.2:-76816745 None:intergenic
GTGAAGACTACAATTGGTGG+TGG 0.618344 8.2:+76817596 MS.gene36990:CDS
GTAACTGCCCACAAAGACCA+AGG 0.618820 8.2:-76817296 None:intergenic
GATACAAAGAATTTGATGCA+AGG 0.619971 8.2:+76816505 MS.gene36990:CDS
TTAACCATGAATACAAGGAG+TGG 0.620436 8.2:+76816446 MS.gene36990:CDS
GTGGAATGACAAGAATCCAC+AGG 0.621010 8.2:+76816465 MS.gene36990:CDS
GGGAGGTCTTATGACTGCAA+TGG 0.622639 8.2:+76817036 MS.gene36990:CDS
GGTTCAAAGGAAACTATCAA+GGG 0.629858 8.2:+76815807 MS.gene36990:CDS
TCACAGAAGAGTAGATCTTG+CGG 0.630056 8.2:-76817807 None:intergenic
CCAGCTAGACACACAAGATG+AGG 0.631162 8.2:+76816850 MS.gene36990:CDS
GGGTGACGCTCTCTATGTCA+AGG 0.635028 8.2:+76815176 MS.gene36990:intron
TCATTGCCACCATTCCAGAA+AGG 0.638258 8.2:-76816787 None:intergenic
GGTTGAACGGACGGAGATGG+CGG 0.642205 8.2:-76813870 None:intergenic
TTGCTGTTCTTAGACAAAGG+AGG 0.643328 8.2:+76815741 MS.gene36990:CDS
CATCTTGTACAAACGTGCCG+AGG 0.645264 8.2:-76817098 None:intergenic
CAATCTACTACATATGAACA+CGG 0.645840 8.2:+76815773 MS.gene36990:CDS
TCCAAAGGGAACTGCCCCAG+AGG 0.651738 8.2:-76817230 None:intergenic
TTCTTGTCTCCATCTAATCG+GGG 0.653447 8.2:+76817016 MS.gene36990:CDS
GCTGAATGCTTTGATCTGGG+GGG 0.659660 8.2:+76817201 MS.gene36990:CDS
AGATCAAATGGGCATCACGG+TGG 0.661600 8.2:+76816690 MS.gene36990:CDS
ACAAGAAGTCGATACAAACA+AGG 0.669581 8.2:+76816540 MS.gene36990:CDS
CAATTTCATACAGAGCAAGG+AGG 0.671919 8.2:+76815908 MS.gene36990:intron
AAGGTAGAAGGAATGGACGG+AGG 0.672788 8.2:-76813933 None:intergenic
TTGTCTCCATCTAATCGGGG+AGG 0.679868 8.2:+76817019 MS.gene36990:CDS
GCAGTGAAGACTACAATTGG+TGG 0.685384 8.2:+76817593 MS.gene36990:CDS
TAACTGCCCACAAAGACCAA+GGG 0.686563 8.2:-76817295 None:intergenic
ATGAGGCTCAAGAAGAAACA+GGG 0.692303 8.2:+76816867 MS.gene36990:CDS
GGGAAGGTAGAAGGAATGGA+CGG 0.694016 8.2:-76813936 None:intergenic
AGATGTTCAAGGGCACAGAG+TGG 0.697032 8.2:+76817116 MS.gene36990:CDS
GAACAGTGCAGAAAATTTGG+GGG 0.697685 8.2:+76815278 MS.gene36990:CDS
CGTACGGTTTGGAAATCGCG+AGG 0.700988 8.2:-76813968 None:intergenic
GTTCAAAGGAAACTATCAAG+GGG 0.706591 8.2:+76815808 MS.gene36990:CDS
CAGCTGATGACCCAGCAGTG+AGG 0.737832 8.2:-76817627 None:intergenic
AGGCTCAAGAAGAAACAGGG+TGG 0.742731 8.2:+76816870 MS.gene36990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTGTAAGTTATTTTTAA+TGG + chr8.2:76814483-76814502 MS.gene36990:intron 10.0%
!! AATTAAAGTTATCCAATATA+AGG - chr8.2:76815373-76815392 None:intergenic 15.0%
!!! ATTACTTTTGTGAATTTTTT+TGG + chr8.2:76815625-76815644 MS.gene36990:intron 15.0%
!! AAAGAAAGAAAAAATCAGTT+AGG - chr8.2:76815429-76815448 None:intergenic 20.0%
!! AGTGATAAATATATTGAAGT+TGG + chr8.2:76815567-76815586 MS.gene36990:intron 20.0%
!! CATTGAAAACTCAATATATA+CGG + chr8.2:76815320-76815339 MS.gene36990:CDS 20.0%
!! TAAAAGAAACATCATAATGA+AGG - chr8.2:76816207-76816226 None:intergenic 20.0%
!!! AATTGGAAATTCTAAGAATT+AGG - chr8.2:76815893-76815912 None:intergenic 20.0%
!!! ATAATATTGTGTTGTTGATT+CGG + chr8.2:76814132-76814151 MS.gene36990:intron 20.0%
!!! ATTGGAAATTCTAAGAATTA+GGG - chr8.2:76815892-76815911 None:intergenic 20.0%
!!! TAATTGAAGTAATTTGTGTT+TGG + chr8.2:76814212-76814231 MS.gene36990:intron 20.0%
!!! TCAATACTATGTTTTATATC+TGG + chr8.2:76816109-76816128 MS.gene36990:intron 20.0%
! AATATAAGGCAAAATCAGTT+AGG - chr8.2:76815359-76815378 None:intergenic 25.0%
! ACAGTTACAAGTTCATATAA+AGG - chr8.2:76815037-76815056 None:intergenic 25.0%
! ATGTTCAATTCAAAGCTTTA+GGG - chr8.2:76815697-76815716 None:intergenic 25.0%
! CAAAGCAAATTTGAATTGAT+TGG - chr8.2:76816926-76816945 None:intergenic 25.0%
! CATCAAAATATAAGGCAAAA+TGG - chr8.2:76815402-76815421 None:intergenic 25.0%
! TAGCTCATAGTATCATATAA+TGG - chr8.2:76816642-76816661 None:intergenic 25.0%
! TATCTTATCAATCAGCTATT+AGG + chr8.2:76816253-76816272 MS.gene36990:intron 25.0%
! TGAAGACTAATAAAATTCCT+AGG + chr8.2:76817353-76817372 MS.gene36990:CDS 25.0%
! TGATTTATTAGTTCACTTGT+GGG + chr8.2:76815149-76815168 MS.gene36990:intron 25.0%
! TTATCATATACCCAAAGTAA+AGG - chr8.2:76817723-76817742 None:intergenic 25.0%
! TTCTTTCTTAGTTTCATATG+AGG + chr8.2:76815443-76815462 MS.gene36990:intron 25.0%
! TTGATTTATTAGTTCACTTG+TGG + chr8.2:76815148-76815167 MS.gene36990:intron 25.0%
! TTTAATCAGCAATACCTTAA+AGG - chr8.2:76816590-76816609 None:intergenic 25.0%
! TTTCACAGAAATGATTTCAA+TGG - chr8.2:76816332-76816351 None:intergenic 25.0%
!! AAACATAAACGCAGTTTTTA+AGG - chr8.2:76817152-76817171 None:intergenic 25.0%
!! AGGTATTGCTGATTAAAAAT+TGG + chr8.2:76816593-76816612 MS.gene36990:intron 25.0%
!! TAGGTTGACATCAAAATATA+AGG - chr8.2:76815410-76815429 None:intergenic 25.0%
!! TTGGAAATTCTAAGAATTAG+GGG - chr8.2:76815891-76815910 None:intergenic 25.0%
!! TTTTCTTCCTCAAAATGAAA+AGG - chr8.2:76814986-76815005 None:intergenic 25.0%
!!! AACTTGTAACTGTTGATTTT+GGG + chr8.2:76815044-76815063 MS.gene36990:intron 25.0%
!!! ATAGTATCATATAATGGATG+AGG - chr8.2:76816636-76816655 None:intergenic 25.0%
!!! GAATTTTATTAGTCTTCACA+GGG - chr8.2:76817351-76817370 None:intergenic 25.0%
!!! TAACTGATTTTGCCTTATAT+TGG + chr8.2:76815358-76815377 MS.gene36990:intron 25.0%
AAAAACTGCGTTTATGTTTC+CGG + chr8.2:76817153-76817172 MS.gene36990:CDS 30.0%
AAAAGAATGAGAAAGATGAC+GGG - chr8.2:76816290-76816309 None:intergenic 30.0%
AAGTTCAATCATATGATGCT+TGG - chr8.2:76816086-76816105 None:intergenic 30.0%
AATCATCAGAGAGTTAATGA+TGG - chr8.2:76816759-76816778 None:intergenic 30.0%
ACAATGATATTTGCTTTGCT+AGG + chr8.2:76816992-76817011 MS.gene36990:CDS 30.0%
AGAAAATTGAGTAGAGGAAA+AGG - chr8.2:76817657-76817676 None:intergenic 30.0%
AGAAGTAGAAAATTGAGTAG+AGG - chr8.2:76817663-76817682 None:intergenic 30.0%
AGCAAATTTGAATTGATTGG+TGG - chr8.2:76816923-76816942 None:intergenic 30.0%
ATGAAGGTAAGATCTATTAG+AGG - chr8.2:76816191-76816210 None:intergenic 30.0%
ATGATACTATGAGCTAAGAT+TGG + chr8.2:76816646-76816665 MS.gene36990:intron 30.0%
ATTCAGCATCCAAAATTGTA+TGG - chr8.2:76815495-76815514 None:intergenic 30.0%
CAAAAGAATGAGAAAGATGA+CGG - chr8.2:76816291-76816310 None:intergenic 30.0%
CAATCTACTACATATGAACA+CGG + chr8.2:76815773-76815792 MS.gene36990:CDS 30.0%
CAATGATATTTGCTTTGCTA+GGG + chr8.2:76816993-76817012 MS.gene36990:CDS 30.0%
CACATATGATGTTTCCTTTA+AGG + chr8.2:76816573-76816592 MS.gene36990:CDS 30.0%
CAGTATTAACCATGAATACA+AGG + chr8.2:76816441-76816460 MS.gene36990:intron 30.0%
CATGTTCAATTCAAAGCTTT+AGG - chr8.2:76815698-76815717 None:intergenic 30.0%
CGGATTATTTAATCTGTGTT+TGG + chr8.2:76814152-76814171 MS.gene36990:intron 30.0%
GAAAACTCAATATATACGGT+GGG + chr8.2:76815324-76815343 MS.gene36990:intron 30.0%
GATACAAAGAATTTGATGCA+AGG + chr8.2:76816505-76816524 MS.gene36990:CDS 30.0%
GCTGATTGATAAGATATCTA+TGG - chr8.2:76816249-76816268 None:intergenic 30.0%
TCTTTATCCTGACATCAATA+TGG + chr8.2:76817467-76817486 MS.gene36990:CDS 30.0%
TGAAAACTCAATATATACGG+TGG + chr8.2:76815323-76815342 MS.gene36990:intron 30.0%
TTCAAGTAGTAGTAGTCATA+CGG - chr8.2:76815234-76815253 None:intergenic 30.0%
TTCTTAGTTTCATATGAGGA+AGG + chr8.2:76815447-76815466 MS.gene36990:intron 30.0%
TTGGAAGATGAAAGAAGAAA+TGG - chr8.2:76813998-76814017 None:intergenic 30.0%
TTTCTACTTCTTTACCAAGT+TGG + chr8.2:76817672-76817691 MS.gene36990:CDS 30.0%
TTTGAATCTTAGTGCATGTT+TGG + chr8.2:76814860-76814879 MS.gene36990:intron 30.0%
! AAAACGTGTGCTTTTGAATT+AGG - chr8.2:76814668-76814687 None:intergenic 30.0%
! AATTTGCTTTGCGTTTATGT+TGG + chr8.2:76816935-76816954 MS.gene36990:CDS 30.0%
! ATGATTGTTCTTTTCCTTTC+TGG + chr8.2:76816773-76816792 MS.gene36990:CDS 30.0%
! GTTTTTATGGGTTTATTTGC+TGG + chr8.2:76817070-76817089 MS.gene36990:CDS 30.0%
! TGGAAATTCTAAGAATTAGG+GGG - chr8.2:76815890-76815909 None:intergenic 30.0%
! TGTTAGACCTTTTCATTTTG+AGG + chr8.2:76814976-76814995 MS.gene36990:intron 30.0%
!! CTATGTTTTATATCTGGAAC+TGG + chr8.2:76816115-76816134 MS.gene36990:intron 30.0%
!!! ACTTGTAACTGTTGATTTTG+GGG + chr8.2:76815045-76815064 MS.gene36990:intron 30.0%
!!! ATAGTTTTATTGCATGTGCT+TGG + chr8.2:76815120-76815139 MS.gene36990:intron 30.0%
!!! CTTTTGTGAATTTTTTTGGC+CGG + chr8.2:76815629-76815648 MS.gene36990:intron 30.0%
!!! GAACTTGTAACTGTTGATTT+TGG + chr8.2:76815043-76815062 MS.gene36990:intron 30.0%
!!! GGAATTTTATTAGTCTTCAC+AGG - chr8.2:76817352-76817371 None:intergenic 30.0%
!!! TTTTAGAGTCATGTATCACA+AGG + chr8.2:76815959-76815978 MS.gene36990:CDS 30.0%
AAAACTGCGTTTATGTTTCC+GGG + chr8.2:76817154-76817173 MS.gene36990:CDS 35.0%
AAACTCAAGCTTAGTTGTTC+TGG + chr8.2:76814754-76814773 MS.gene36990:intron 35.0%
AACCAGTTCTACTACATCTT+TGG + chr8.2:76817493-76817512 MS.gene36990:CDS 35.0%
AAGAAGAAATGGAGAACGTA+CGG - chr8.2:76813987-76814006 None:intergenic 35.0%
AAGATACCAAAAAGAATGCC+CGG - chr8.2:76817175-76817194 None:intergenic 35.0%
ACAAGAAGTCGATACAAACA+AGG + chr8.2:76816540-76816559 MS.gene36990:CDS 35.0%
ACCAATCAGAATTGAGAAGA+CGG - chr8.2:76817410-76817429 None:intergenic 35.0%
ACGTTTGTACAAGATGTTCA+AGG + chr8.2:76817105-76817124 MS.gene36990:CDS 35.0%
AGAACAACTAAGCTTGAGTT+TGG - chr8.2:76814755-76814774 None:intergenic 35.0%
AGAGCAATCATTGTTCCAAA+GGG - chr8.2:76817247-76817266 None:intergenic 35.0%
ATACTATGAGCTAAGATTGG+TGG + chr8.2:76816649-76816668 MS.gene36990:intron 35.0%
ATGAGAGAAAATCAAGTACC+AGG - chr8.2:76816403-76816422 None:intergenic 35.0%
CATATAGAGAAGCCATAAAC+CGG - chr8.2:76815651-76815670 None:intergenic 35.0%
CGTGTTCATATGTAGTAGAT+TGG - chr8.2:76815775-76815794 None:intergenic 35.0%
CGTTTGTACAAGATGTTCAA+GGG + chr8.2:76817106-76817125 MS.gene36990:CDS 35.0%
GACTAATAAAATTCCTAGGC+AGG + chr8.2:76817357-76817376 MS.gene36990:CDS 35.0%
GGATGATGAACACTATGAAA+AGG - chr8.2:76817522-76817541 None:intergenic 35.0%
GGTTCAAAGGAAACTATCAA+GGG + chr8.2:76815807-76815826 MS.gene36990:CDS 35.0%
GTAGGAGTGATAATTGAGTT+AGG - chr8.2:76814610-76814629 None:intergenic 35.0%
GTGAACAGTGCAGAAAATTT+GGG + chr8.2:76815276-76815295 MS.gene36990:CDS 35.0%
GTTCAAAGGAAACTATCAAG+GGG + chr8.2:76815808-76815827 MS.gene36990:CDS 35.0%
GTTTCATTACTCATCACATG+TGG - chr8.2:76814954-76814973 None:intergenic 35.0%
TAGAGCAATCATTGTTCCAA+AGG - chr8.2:76817248-76817267 None:intergenic 35.0%
TATCAGTGTAGTGTTAGTGA+TGG - chr8.2:76814284-76814303 None:intergenic 35.0%
TCAATAAACACTGCACCAAA+GGG - chr8.2:76817442-76817461 None:intergenic 35.0%
TCAGGAAAGTGAGATCAAAT+GGG + chr8.2:76816679-76816698 MS.gene36990:intron 35.0%
TGAACAGTGCAGAAAATTTG+GGG + chr8.2:76815277-76815296 MS.gene36990:CDS 35.0%
TGATTGCTCTAGTGTGTTTA+TGG + chr8.2:76817257-76817276 MS.gene36990:CDS 35.0%
TGTGAACAGTGCAGAAAATT+TGG + chr8.2:76815275-76815294 MS.gene36990:CDS 35.0%
TGTGTCTAGCTGGTTATAAT+TGG - chr8.2:76816843-76816862 None:intergenic 35.0%
TTAACCATGAATACAAGGAG+TGG + chr8.2:76816446-76816465 MS.gene36990:CDS 35.0%
TTCAGGAAAGTGAGATCAAA+TGG + chr8.2:76816678-76816697 MS.gene36990:intron 35.0%
TTCCAATTTCATACAGAGCA+AGG + chr8.2:76815905-76815924 MS.gene36990:intron 35.0%
! GTTCTACTGTGGGTTTTTAT+GGG + chr8.2:76817058-76817077 MS.gene36990:CDS 35.0%
! TTGTTCATGGAGATGTTTTC+AGG + chr8.2:76816897-76816916 MS.gene36990:CDS 35.0%
! TTTGTTGTGACTGGAACAAT+TGG + chr8.2:76817760-76817779 MS.gene36990:CDS 35.0%
! TTTTGCAAAAGCAGTGATTC+TGG + chr8.2:76814924-76814943 MS.gene36990:intron 35.0%
!! AAGCACCAACACTTTTTATC+AGG - chr8.2:76814557-76814576 None:intergenic 35.0%
!! AAGCTTTGAATTGAACATGC+AGG + chr8.2:76815699-76815718 MS.gene36990:intron 35.0%
!! ACATGACTCTAAAACTCAAG+TGG - chr8.2:76815953-76815972 None:intergenic 35.0%
!! AGCTTTGAATTGAACATGCA+GGG + chr8.2:76815700-76815719 MS.gene36990:intron 35.0%
!! GTGATGGATTGATTCTAAGA+CGG - chr8.2:76814268-76814287 None:intergenic 35.0%
!! GTGTTTATGGTTCGGTATAT+CGG + chr8.2:76817270-76817289 MS.gene36990:CDS 35.0%
!! TCACTGCTTTTGCAAAATCA+TGG - chr8.2:76814921-76814940 None:intergenic 35.0%
!! TGTTCTTTTCCTTTCTGGAA+TGG + chr8.2:76816778-76816797 MS.gene36990:CDS 35.0%
!! TGTTGCTTGCCATACAATTT+TGG + chr8.2:76815483-76815502 MS.gene36990:CDS 35.0%
!! TGTTTGTATCGACTTCTTGT+GGG - chr8.2:76816540-76816559 None:intergenic 35.0%
!! TTCGTTTTTCCTTGGATCTA+GGG + chr8.2:76814031-76814050 MS.gene36990:intron 35.0%
!! TTGTTTGTATCGACTTCTTG+TGG - chr8.2:76816541-76816560 None:intergenic 35.0%
!!! AAGATTGGTGGTACTTTTTC+AGG + chr8.2:76816661-76816680 MS.gene36990:intron 35.0%
!!! CTTGTAACTGTTGATTTTGG+GGG + chr8.2:76815046-76815065 MS.gene36990:intron 35.0%
!!! GAATTTTTTTGGCCGGTTTA+TGG + chr8.2:76815636-76815655 MS.gene36990:intron 35.0%
!!! GTTCTGGTGTGGTTTTAATT+TGG + chr8.2:76814770-76814789 MS.gene36990:intron 35.0%
AACGAACATAGCGAGGAAAT+TGG - chr8.2:76814017-76814036 None:intergenic 40.0%
AAGCTAAAACCCTAGATCCA+AGG - chr8.2:76814043-76814062 None:intergenic 40.0%
AAGGAAAAACGAACATAGCG+AGG - chr8.2:76814024-76814043 None:intergenic 40.0%
AATGCAACACCCACAAAGAT+AGG - chr8.2:76816058-76816077 None:intergenic 40.0%
ACCTCAGTCACAATTTGAGT+AGG - chr8.2:76814628-76814647 None:intergenic 40.0%
AGCCAAAGATGTAGTAGAAC+TGG - chr8.2:76817498-76817517 None:intergenic 40.0%
AGTTCAGCAGAAGGATACTT+AGG + chr8.2:76814800-76814819 MS.gene36990:intron 40.0%
ATGAGGCTCAAGAAGAAACA+GGG + chr8.2:76816867-76816886 MS.gene36990:CDS 40.0%
CAATTTCATACAGAGCAAGG+AGG + chr8.2:76815908-76815927 MS.gene36990:intron 40.0%
CACGAACACTTCTTTATCGA+AGG - chr8.2:76814327-76814346 None:intergenic 40.0%
CATTCCACTCCTTGTATTCA+TGG - chr8.2:76816453-76816472 None:intergenic 40.0%
CCAATCAGAATTGAGAAGAC+GGG - chr8.2:76817409-76817428 None:intergenic 40.0%
CTCAATAAACACTGCACCAA+AGG - chr8.2:76817443-76817462 None:intergenic 40.0%
CTCCTTGCTCTGTATGAAAT+TGG - chr8.2:76815910-76815929 None:intergenic 40.0%
CTTTGCGTTTATGTTGGTAC+TGG + chr8.2:76816941-76816960 MS.gene36990:CDS 40.0%
CTTTGTCTAAGAACAGCAAC+TGG - chr8.2:76815740-76815759 None:intergenic 40.0%
GAACAGTGCAGAAAATTTGG+GGG + chr8.2:76815278-76815297 MS.gene36990:CDS 40.0%
GCACTGTTCACAATCTTAGA+GGG - chr8.2:76815267-76815286 None:intergenic 40.0%
GCTCTAGTGTGTTTATGGTT+CGG + chr8.2:76817262-76817281 MS.gene36990:CDS 40.0%
GGAAAAGAACAAGACCTGTT+TGG - chr8.2:76816029-76816048 None:intergenic 40.0%
GGGTTCAAAGGAAACTATCA+AGG + chr8.2:76815806-76815825 MS.gene36990:CDS 40.0%
GGTTCTTGTCTCCATCTAAT+CGG + chr8.2:76817014-76817033 MS.gene36990:CDS 40.0%
GGTTTAGCCATATTGATGTC+AGG - chr8.2:76817477-76817496 None:intergenic 40.0%
GTAGATTTCAAATGACTGCC+TGG + chr8.2:76816382-76816401 MS.gene36990:intron 40.0%
GTCTTCTCAATTCTGATTGG+TGG + chr8.2:76817409-76817428 MS.gene36990:CDS 40.0%
GTTCTTGTCTCCATCTAATC+GGG + chr8.2:76817015-76817034 MS.gene36990:CDS 40.0%
TACTCAAATTGTGACTGAGG+TGG + chr8.2:76814627-76814646 MS.gene36990:intron 40.0%
TATCACAAGGATCCTGAAAC+TGG + chr8.2:76815972-76815991 MS.gene36990:CDS 40.0%
TCACAGAAGAGTAGATCTTG+CGG - chr8.2:76817810-76817829 None:intergenic 40.0%
TCCTACTCAAATTGTGACTG+AGG + chr8.2:76814624-76814643 MS.gene36990:intron 40.0%
TCTCAGGCATCCTTTACTTT+GGG + chr8.2:76817710-76817729 MS.gene36990:CDS 40.0%
TGAATGATGATCAGATCCAC+TGG + chr8.2:76816729-76816748 MS.gene36990:CDS 40.0%
TGCACTGTTCACAATCTTAG+AGG - chr8.2:76815268-76815287 None:intergenic 40.0%
TGCTCGTATTGTTGGATTTG+AGG + chr8.2:76815998-76816017 MS.gene36990:CDS 40.0%
TGCTGTTCTTAGACAAAGGA+GGG + chr8.2:76815742-76815761 MS.gene36990:CDS 40.0%
TGTGCAGTGAAGACTACAAT+TGG + chr8.2:76817590-76817609 MS.gene36990:CDS 40.0%
TGTGCTGAATGCTTTGATCT+GGG + chr8.2:76817198-76817217 MS.gene36990:CDS 40.0%
TGTTCCAGTCACAACAAAGA+AGG - chr8.2:76817758-76817777 None:intergenic 40.0%
TTATTGCATGTCGTTACCTG+TGG - chr8.2:76816484-76816503 None:intergenic 40.0%
TTCTTGTCTCCATCTAATCG+GGG + chr8.2:76817016-76817035 MS.gene36990:CDS 40.0%
TTGTGCTGAATGCTTTGATC+TGG + chr8.2:76817197-76817216 MS.gene36990:CDS 40.0%
! ACGCACCTGATAAAAAGTGT+TGG + chr8.2:76814549-76814568 MS.gene36990:intron 40.0%
! AGTTAATGATGGAGAACCAG+TGG - chr8.2:76816748-76816767 None:intergenic 40.0%
! ATGTTTCCGGGCATTCTTTT+TGG + chr8.2:76817166-76817185 MS.gene36990:CDS 40.0%
! CAAGTTGGAGATTACAAAGC+TGG + chr8.2:76817687-76817706 MS.gene36990:CDS 40.0%
! CAGCTTTGTAATCTCCAACT+TGG - chr8.2:76817689-76817708 None:intergenic 40.0%
! CAGTTGCTGTTCTTAGACAA+AGG + chr8.2:76815738-76815757 MS.gene36990:CDS 40.0%
! GAATTGAACATGCAGGGTTT+TGG + chr8.2:76815706-76815725 MS.gene36990:intron 40.0%
! GGAATGTTTAGTTCAGCAGA+AGG + chr8.2:76814791-76814810 MS.gene36990:intron 40.0%
! GGTTCTACTGTGGGTTTTTA+TGG + chr8.2:76817057-76817076 MS.gene36990:CDS 40.0%
! TATGAACACGGTTTTCGTGT+CGG + chr8.2:76815785-76815804 MS.gene36990:CDS 40.0%
! TATGCCTTCTTTGTTGTGAC+TGG + chr8.2:76817751-76817770 MS.gene36990:CDS 40.0%
! TGAGGTGGCTCAATCAATTT+TGG + chr8.2:76814642-76814661 MS.gene36990:intron 40.0%
! TTGCTGTTCTTAGACAAAGG+AGG + chr8.2:76815741-76815760 MS.gene36990:CDS 40.0%
! TTTATTTGCTGGCTACTCCT+CGG + chr8.2:76817081-76817100 MS.gene36990:CDS 40.0%
!! CTGCTTTTGCAAAATCATGG+TGG - chr8.2:76814918-76814937 None:intergenic 40.0%
!! GGTACTGGTGTTCAGATATT+TGG + chr8.2:76816956-76816975 MS.gene36990:CDS 40.0%
!! GTTCGTTTTTCCTTGGATCT+AGG + chr8.2:76814030-76814049 MS.gene36990:intron 40.0%
!! TCGCTATGTTCGTTTTTCCT+TGG + chr8.2:76814023-76814042 MS.gene36990:intron 40.0%
!!! ACTGTTGATTTTGGGGGATT+TGG + chr8.2:76815052-76815071 MS.gene36990:intron 40.0%
!!! TCTTTTCCTTTCTGGAATGG+TGG + chr8.2:76816781-76816800 MS.gene36990:CDS 40.0%
AAGCACCAACACTTCTGATC+GGG - chr8.2:76814444-76814463 None:intergenic 45.0%
ATAAGACCTCCCCGATTAGA+TGG - chr8.2:76817028-76817047 None:intergenic 45.0%
ATACGAGCAGAACCAGTTTC+AGG - chr8.2:76815987-76816006 None:intergenic 45.0%
ATTAGTTCACTTGTGGGACC+AGG + chr8.2:76815155-76815174 MS.gene36990:intron 45.0%
CAAGCTTAGTTGTTCTGGTG+TGG + chr8.2:76814759-76814778 MS.gene36990:intron 45.0%
CCCGTCTTCTCAATTCTGAT+TGG + chr8.2:76817406-76817425 MS.gene36990:CDS 45.0%
GAAATGGAGAACGTACGGTT+TGG - chr8.2:76813982-76814001 None:intergenic 45.0%
GATCACCTGTGCTGAGATTA+CGG + chr8.2:76817546-76817565 MS.gene36990:CDS 45.0%
GATGAGGCTCAAGAAGAAAC+AGG + chr8.2:76816866-76816885 MS.gene36990:CDS 45.0%
GCAGTGAAGACTACAATTGG+TGG + chr8.2:76817593-76817612 MS.gene36990:CDS 45.0%
GTCTAAGAACAGCAACTGGA+AGG - chr8.2:76815736-76815755 None:intergenic 45.0%
GTCTCAGGCATCCTTTACTT+TGG + chr8.2:76817709-76817728 MS.gene36990:CDS 45.0%
GTCTTTGTGGGCAGTTACTT+AGG + chr8.2:76817301-76817320 MS.gene36990:CDS 45.0%
GTGAAGACTACAATTGGTGG+TGG + chr8.2:76817596-76817615 MS.gene36990:CDS 45.0%
GTGAGATCAAATGGGCATCA+CGG + chr8.2:76816687-76816706 MS.gene36990:CDS 45.0%
GTGCTGAATGCTTTGATCTG+GGG + chr8.2:76817199-76817218 MS.gene36990:CDS 45.0%
GTGGAATGACAAGAATCCAC+AGG + chr8.2:76816465-76816484 MS.gene36990:CDS 45.0%
GTTCTTAGACAAAGGAGGGA+TGG + chr8.2:76815746-76815765 MS.gene36990:CDS 45.0%
TAACTGCCCACAAAGACCAA+GGG - chr8.2:76817298-76817317 None:intergenic 45.0%
TCATTGCCACCATTCCAGAA+AGG - chr8.2:76816790-76816809 None:intergenic 45.0%
TCTCAGCACAGGTGATCAAT+AGG - chr8.2:76817543-76817562 None:intergenic 45.0%
TGCTGAATGCTTTGATCTGG+GGG + chr8.2:76817200-76817219 MS.gene36990:CDS 45.0%
TGGAATGTAATCACGCGTGT+CGG + chr8.2:76814503-76814522 MS.gene36990:intron 45.0%
TGTAGTCTTCACTGCACAAC+TGG - chr8.2:76817588-76817607 None:intergenic 45.0%
TGTATGGCAAGCAACAGTAC+AGG - chr8.2:76815479-76815498 None:intergenic 45.0%
TTAGTTCACTTGTGGGACCA+GGG + chr8.2:76815156-76815175 MS.gene36990:intron 45.0%
TTCACAGGGTCTTCAATTGC+TGG - chr8.2:76817337-76817356 None:intergenic 45.0%
TTGGCTTCTATGCTTGCTTC+TGG + chr8.2:76817779-76817798 MS.gene36990:CDS 45.0%
! ACAGGGTGGAAACTTGTTCA+TGG + chr8.2:76816884-76816903 MS.gene36990:CDS 45.0%
! ATGAACACGGTTTTCGTGTC+GGG + chr8.2:76815786-76815805 MS.gene36990:CDS 45.0%
! ATTGGTGGCATTCTTCCCTT+TGG + chr8.2:76817424-76817443 MS.gene36990:CDS 45.0%
! GAAGCACCAACACTTCTGAT+CGG - chr8.2:76814445-76814464 None:intergenic 45.0%
! GACTGCAATGGTTCTACTGT+GGG + chr8.2:76817048-76817067 MS.gene36990:CDS 45.0%
! GAGATTACAAAGCTGGTCTC+AGG + chr8.2:76817694-76817713 MS.gene36990:CDS 45.0%
! GATTTGAGGTCACACCAAAC+AGG + chr8.2:76816012-76816031 MS.gene36990:CDS 45.0%
! TGACTGCAATGGTTCTACTG+TGG + chr8.2:76817047-76817066 MS.gene36990:CDS 45.0%
! TTCTTTATCGAAGGCGTGTC+CGG - chr8.2:76814318-76814337 None:intergenic 45.0%
!! ACTGGTTCTGCTCGTATTGT+TGG + chr8.2:76815990-76816009 MS.gene36990:CDS 45.0%
AAGGTAGAAGGAATGGACGG+AGG - chr8.2:76813936-76813955 None:intergenic 50.0%
AATTTGGGGGAGGTTCTTCG+AGG + chr8.2:76815291-76815310 MS.gene36990:CDS 50.0%
ACACCCACAAAGATAGGTGG+AGG - chr8.2:76816052-76816071 None:intergenic 50.0%
ACCCACAAAGATAGGTGGAG+GGG - chr8.2:76816050-76816069 None:intergenic 50.0%
AGATCAAATGGGCATCACGG+TGG + chr8.2:76816690-76816709 MS.gene36990:CDS 50.0%
AGGCTCAAGAAGAAACAGGG+TGG + chr8.2:76816870-76816889 MS.gene36990:CDS 50.0%
ATGGTGGCTCACTGGTATTC+TGG - chr8.2:76814902-76814921 None:intergenic 50.0%
CACAACCGTAATCTCAGCAC+AGG - chr8.2:76817554-76817573 None:intergenic 50.0%
CACCCACAAAGATAGGTGGA+GGG - chr8.2:76816051-76816070 None:intergenic 50.0%
CACTGATACGTGTCACACAC+CGG + chr8.2:76814296-76814315 MS.gene36990:intron 50.0%
CAGTGCAGAAAATTTGGGGG+AGG + chr8.2:76815281-76815300 MS.gene36990:CDS 50.0%
CATCTTGTACAAACGTGCCG+AGG - chr8.2:76817101-76817120 None:intergenic 50.0%
CCAGCTAGACACACAAGATG+AGG + chr8.2:76816850-76816869 MS.gene36990:CDS 50.0%
CCTCATCTTGTGTGTCTAGC+TGG - chr8.2:76816853-76816872 None:intergenic 50.0%
GAGGAGAGTGGTGAAGAAGA+CGG - chr8.2:76813903-76813922 None:intergenic 50.0%
GATCAAATGGGCATCACGGT+GGG + chr8.2:76816691-76816710 MS.gene36990:CDS 50.0%
GCAAAATCATGGTGGCTCAC+TGG - chr8.2:76814910-76814929 None:intergenic 50.0%
GCAACACCCACAAAGATAGG+TGG - chr8.2:76816055-76816074 None:intergenic 50.0%
GCTGAATGCTTTGATCTGGG+GGG + chr8.2:76817201-76817220 MS.gene36990:CDS 50.0%
GGGAAGGTAGAAGGAATGGA+CGG - chr8.2:76813939-76813958 None:intergenic 50.0%
GTAACTGCCCACAAAGACCA+AGG - chr8.2:76817299-76817318 None:intergenic 50.0%
GTCCATTCCTTCTACCTTCC+CGG + chr8.2:76813938-76813957 MS.gene36990:CDS 50.0%
GTTCGGTATATCGGTACCCT+TGG + chr8.2:76817279-76817298 MS.gene36990:CDS 50.0%
TCCCCTCCACCTATCTTTGT+GGG + chr8.2:76816046-76816065 MS.gene36990:intron 50.0%
TTCCCCTCCACCTATCTTTG+TGG + chr8.2:76816045-76816064 MS.gene36990:intron 50.0%
TTGTCTCCATCTAATCGGGG+AGG + chr8.2:76817019-76817038 MS.gene36990:CDS 50.0%
! AGATGTTCAAGGGCACAGAG+TGG + chr8.2:76817116-76817135 MS.gene36990:CDS 50.0%
! ATCGGTACCCTTGGTCTTTG+TGG + chr8.2:76817288-76817307 MS.gene36990:CDS 50.0%
! GGGAGGTCTTATGACTGCAA+TGG + chr8.2:76817036-76817055 MS.gene36990:CDS 50.0%
! GGTTTTCGTGTCGGGTTCAA+AGG + chr8.2:76815794-76815813 MS.gene36990:CDS 50.0%
! TCGGTACCCTTGGTCTTTGT+GGG + chr8.2:76817289-76817308 MS.gene36990:CDS 50.0%
!! TGAGAAAGATGACGGGTCAC+AGG - chr8.2:76816283-76816302 None:intergenic 50.0%
AGGAATGGACGGAGGAGAAG+AGG - chr8.2:76813928-76813947 None:intergenic 55.0%
AGTGGTGAAGAAGACGGTGG+TGG - chr8.2:76813897-76813916 None:intergenic 55.0%
GAGAGTGGTGAAGAAGACGG+TGG - chr8.2:76813900-76813919 None:intergenic 55.0%
GGAGAAGAGGAAGAGGAGAG+TGG - chr8.2:76813915-76813934 None:intergenic 55.0%
GGAGAGCTTACCTCACTGCT+GGG + chr8.2:76817617-76817636 MS.gene36990:CDS 55.0%
GGGTGACGCTCTCTATGTCA+AGG + chr8.2:76815176-76815195 MS.gene36990:intron 55.0%
GTCATGTACCATGCCTGCTC+AGG - chr8.2:76817385-76817404 None:intergenic 55.0%
TGACACCAGCACGTGGACAT+GGG + chr8.2:76814417-76814436 MS.gene36990:intron 55.0%
TGGAGAGCTTACCTCACTGC+TGG + chr8.2:76817616-76817635 MS.gene36990:CDS 55.0%
TGTGTTGTGACACCAGCACG+TGG + chr8.2:76814410-76814429 MS.gene36990:intron 55.0%
! CGTACGGTTTGGAAATCGCG+AGG - chr8.2:76813971-76813990 None:intergenic 55.0%
! TCAAGGGCACAGAGTGGAAG+AGG + chr8.2:76817122-76817141 MS.gene36990:CDS 55.0%
! TGGGACCCGATCAGAAGTGT+TGG + chr8.2:76814436-76814455 MS.gene36990:intron 55.0%
!! AGACGGTGGTGGTGGTTGAA+CGG - chr8.2:76813886-76813905 None:intergenic 55.0%
!! TGACATAGAGAGCGTCACCC+TGG - chr8.2:76815176-76815195 None:intergenic 55.0%
AAATCGCGAGGAGCAACGCC+GGG - chr8.2:76813959-76813978 None:intergenic 60.0%
AGCAACGCCGGGAAGGTAGA+AGG - chr8.2:76813948-76813967 None:intergenic 60.0%
AGGTGCGTGTCCACGTGTCA+GGG - chr8.2:76814537-76814556 None:intergenic 60.0%
CAGCTGATGACCCAGCAGTG+AGG - chr8.2:76817630-76817649 None:intergenic 60.0%
CGCCGGGAAGGTAGAAGGAA+TGG - chr8.2:76813943-76813962 None:intergenic 60.0%
GAAATCGCGAGGAGCAACGC+CGG - chr8.2:76813960-76813979 None:intergenic 60.0%
GGACGGAGGAGAAGAGGAAG+AGG - chr8.2:76813922-76813941 None:intergenic 60.0%
GGTGGTTGAACGGACGGAGA+TGG - chr8.2:76813876-76813895 None:intergenic 60.0%
GGTTGAACGGACGGAGATGG+CGG - chr8.2:76813873-76813892 None:intergenic 60.0%
GTGACACCAGCACGTGGACA+TGG + chr8.2:76814416-76814435 MS.gene36990:intron 60.0%
TCCAAAGGGAACTGCCCCAG+AGG - chr8.2:76817233-76817252 None:intergenic 60.0%
TCCTAGGCAGGTACCTGAGC+AGG + chr8.2:76817369-76817388 MS.gene36990:CDS 60.0%
! GGTGAAGAAGACGGTGGTGG+TGG - chr8.2:76813894-76813913 None:intergenic 60.0%
! GGTGTTGTGACCCTGACACG+TGG + chr8.2:76814524-76814543 MS.gene36990:intron 60.0%
!! GGTGGTGGTGGTTGAACGGA+CGG - chr8.2:76813882-76813901 None:intergenic 60.0%
!! TCCTCTGGGGCAGTTCCCTT+TGG + chr8.2:76817229-76817248 MS.gene36990:CDS 60.0%
ATCTGGGGGGAGCAGTCCTC+TGG + chr8.2:76817214-76817233 MS.gene36990:CDS 65.0%
CAGGTGCGTGTCCACGTGTC+AGG - chr8.2:76814538-76814557 None:intergenic 65.0%
GCCTGCTCAGGTACCTGCCT+AGG - chr8.2:76817373-76817392 None:intergenic 65.0%
GGCAGGTACCTGAGCAGGCA+TGG + chr8.2:76817374-76817393 MS.gene36990:CDS 65.0%
TCTGGGGGGAGCAGTCCTCT+GGG + chr8.2:76817215-76817234 MS.gene36990:CDS 65.0%
CGGGTCCCATGTCCACGTGC+TGG - chr8.2:76814425-76814444 None:intergenic 70.0%
CTGGGGGGAGCAGTCCTCTG+GGG + chr8.2:76817216-76817235 MS.gene36990:CDS 70.0%
CGCGAGGAGCAACGCCGGGA+AGG - chr8.2:76813955-76813974 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 76813845 76817840 76813845 ID=MS.gene36990
chr8.2 mRNA 76813845 76817840 76813845 ID=MS.gene36990.t1;Parent=MS.gene36990
chr8.2 exon 76813845 76813985 76813845 ID=MS.gene36990.t1.exon1;Parent=MS.gene36990.t1
chr8.2 CDS 76813845 76813985 76813845 ID=cds.MS.gene36990.t1;Parent=MS.gene36990.t1
chr8.2 exon 76815177 76815341 76815177 ID=MS.gene36990.t1.exon2;Parent=MS.gene36990.t1
chr8.2 CDS 76815177 76815341 76815177 ID=cds.MS.gene36990.t1;Parent=MS.gene36990.t1
chr8.2 exon 76815454 76815563 76815454 ID=MS.gene36990.t1.exon3;Parent=MS.gene36990.t1
chr8.2 CDS 76815454 76815563 76815454 ID=cds.MS.gene36990.t1;Parent=MS.gene36990.t1
chr8.2 exon 76815721 76815829 76815721 ID=MS.gene36990.t1.exon4;Parent=MS.gene36990.t1
chr8.2 CDS 76815721 76815829 76815721 ID=cds.MS.gene36990.t1;Parent=MS.gene36990.t1
chr8.2 exon 76815921 76816033 76815921 ID=MS.gene36990.t1.exon5;Parent=MS.gene36990.t1
chr8.2 CDS 76815921 76816033 76815921 ID=cds.MS.gene36990.t1;Parent=MS.gene36990.t1
chr8.2 exon 76816444 76816594 76816444 ID=MS.gene36990.t1.exon6;Parent=MS.gene36990.t1
chr8.2 CDS 76816444 76816594 76816444 ID=cds.MS.gene36990.t1;Parent=MS.gene36990.t1
chr8.2 exon 76816683 76817840 76816683 ID=MS.gene36990.t1.exon7;Parent=MS.gene36990.t1
chr8.2 CDS 76816683 76817840 76816683 ID=cds.MS.gene36990.t1;Parent=MS.gene36990.t1
Gene Sequence

>MS.gene36990

ATGAAGGAGAAGATGATGGGATGCACCGCCATCTCCGTCCGTTCAACCACCACCACCGTCTTCTTCACCACTCTCCTCTTCCTCTTCTCCTCCGTCCATTCCTTCTACCTTCCCGGCGTTGCTCCTCGCGATTTCCAAACCGTACGTTCTCCATTTCTTCTTTCATCTTCCAATTTCCTCGCTATGTTCGTTTTTCCTTGGATCTAGGGTTTTAGCTTTGATCTACGTTGAATCACGCTCTTTCTTTTTTTATTCATACTCGATTTTGTGTTTGTTGAAGTACTTGAATAATATTGTGTTGTTGATTCGGATTATTTAATCTGTGTTTGGTTTGAATTGAATACGATAGATTTTGTGTGATTTATCTTAATTGAAGTAATTTGTGTTTGGATGCTTTTTTTGTCACTCTCAAAGCTTATACCGTCTTAGAATCAATCCATCACTAACACTACACTGATACGTGTCACACACCGGACACGCCTTCGATAAAGAAGTGTTCGTGCTTCAGAGCTTATCGTTAGCGTAAATCGTAAGTCATTTTTAATTGAATGTAATCACATGTGTCTGTGTTGTGACACCAGCACGTGGACATGGGACCCGATCAGAAGTGTTGGTGCTTCAAAGATTATCGTTAGTGTAAATTGTAAGTTATTTTTAATGGAATGTAATCACGCGTGTCGGTGTTGTGACCCTGACACGTGGACACGCACCTGATAAAAAGTGTTGGTGCTTCAAAGCTTATTGCTAGTGTAAATTGTTTAACCTAACTCAATTATCACTCCTACTCAAATTGTGACTGAGGTGGCTCAATCAATTTTGGCCTAATTCAAAAGCACACGTTTTTGTCATGTCATGAAATCGTGTTTGATTGAAGACAAATTCAATTATGATACAATGCAACATTTAACCAAACTCAAGCTTAGTTGTTCTGGTGTGGTTTTAATTTGGAATGTTTAGTTCAGCAGAAGGATACTTAGGAGCTCTTCATTTTAAGTATCAAGCACTTCAATTGCTGTTTGAATCTTAGTGCATGTTTGGCAGCACAGTGAGTTTGCCAGAATACCAGTGAGCCACCATGATTTTGCAAAAGCAGTGATTCTGGCAAACCACATGTGATGAGTAATGAAACTGTGTTAGACCTTTTCATTTTGAGGAAGAAAAAAGAAGAAAAGAAAACATAGTGTGTGTACCTTTATATGAACTTGTAACTGTTGATTTTGGGGGATTTGGTTAAGATAGAGAACATTTTAGTTCAATTTGATTTTTGTTTAGTTTATAGTTTTATTGCATGTGCTTGGAGATATTGATTTATTAGTTCACTTGTGGGACCAGGGTGACGCTCTCTATGTCAAGGTGAACAAATTGTCGTCTACAAAGACTCAGCTTCCGTATGACTACTACTACTTGAAGTATTGCAAACCCTCTAAGATTGTGAACAGTGCAGAAAATTTGGGGGAGGTTCTTCGAGGTGATCGCATTGAAAACTCAATATATACGGTGGGCATCTGTTACCTAACTGATTTTGCCTTATATTGGATAACTTTAATTCAGAGACCATTTTGCCTTATATTTTGATGTCAACCTAACTGATTTTTTCTTTCTTTCTTAGTTTCATATGAGGAAGGAACAGTCCTGTACTGTTGCTTGCCATACAATTTTGGATGCTGAATCTGCAAAGAATTTTAAAGAAAAAATTGATGATGAATATCGAGTGAACATGTAAGTGATAAATATATTGAAGTTGGTGCTTAGTTATGTAGTATGAGCTTGAGTTCATTAAATTACTTTTGTGAATTTTTTTGGCCGGTTTATGGCTTCTCTATATGTTTCTGATTTATATTCTCTTGAGCCCTAAAGCTTTGAATTGAACATGCAGGGTTTTGGATAACCTTCCAGTTGCTGTTCTTAGACAAAGGAGGGATGGCAGCCAATCTACTACATATGAACACGGTTTTCGTGTCGGGTTCAAAGGAAACTATCAAGGGGTATAACTCGCGAACTCAGCATTTATTTCTATTATAGAATTTAAATATCATTTTAGTCCCCCTAATTCTTAGAATTTCCAATTTCATACAGAGCAAGGAGGAGAAATATTTTATCAATAACCACTTGAGTTTTAGAGTCATGTATCACAAGGATCCTGAAACTGGTTCTGCTCGTATTGTTGGATTTGAGGTCACACCAAACAGGTCTTGTTCTTTTCCCCTCCACCTATCTTTGTGGGTGTTGCATTATTAACCAAGCATCATATGATTGAACTTTTTTCAATACTATGTTTTATATCTGGAACTGGAATAAGATGTTGTTCAGAATAACGCAAATGAAACAGATTATATGAGAAGTCCTCTAATAGATCTTACCTTCATTATGATGTTTCTTTTATTTGAAGATAAAAAACTTGCCATAGATATCTTATCAATCAGCTATTAGGTACTCCTGTGACCCGTCATCTTTCTCATTCTTTTGCATTTGTGCATATCACATCCATTGAAATCATTTCTGTGAAATAAAGACAATGTATGTTTGATTGCTTTCTAGTAGATTTCAAATGACTGCCTGGTACTTGATTTTCTCTCATAAGTTCTATAACTGTGAACAGTATTAACCATGAATACAAGGAGTGGAATGACAAGAATCCACAGGTAACGACATGCAATAAAGATACAAAGAATTTGATGCAAGGTAGTACTGTCCCACAAGAAGTCGATACAAACAAGGATATAGTATTCACATATGATGTTTCCTTTAAGGTATTGCTGATTAAAAATTGGCTACTCATGAATTTTCACCTCATCCATTATATGATACTATGAGCTAAGATTGGTGGTACTTTTTCAGGAAAGTGAGATCAAATGGGCATCACGGTGGGACACATATCTTCTAATGAATGATGATCAGATCCACTGGTTCTCCATCATTAACTCTCTGATGATTGTTCTTTTCCTTTCTGGAATGGTGGCAATGATCATGATGAGAACTCTTTACAGAGACATTGCCAATTATAACCAGCTAGACACACAAGATGAGGCTCAAGAAGAAACAGGGTGGAAACTTGTTCATGGAGATGTTTTCAGGCCACCAATCAATTCAAATTTGCTTTGCGTTTATGTTGGTACTGGTGTTCAGATATTTGGAATGACACTTGTGACAATGATATTTGCTTTGCTAGGGTTCTTGTCTCCATCTAATCGGGGAGGTCTTATGACTGCAATGGTTCTACTGTGGGTTTTTATGGGTTTATTTGCTGGCTACTCCTCGGCACGTTTGTACAAGATGTTCAAGGGCACAGAGTGGAAGAGGAATACCTTAAAAACTGCGTTTATGTTTCCGGGCATTCTTTTTGGTATCTTCTTTGTGCTGAATGCTTTGATCTGGGGGGAGCAGTCCTCTGGGGCAGTTCCCTTTGGAACAATGATTGCTCTAGTGTGTTTATGGTTCGGTATATCGGTACCCTTGGTCTTTGTGGGCAGTTACTTAGGTTTTAAGAAACCAGCAATTGAAGACCCTGTGAAGACTAATAAAATTCCTAGGCAGGTACCTGAGCAGGCATGGTACATGACACCCGTCTTCTCAATTCTGATTGGTGGCATTCTTCCCTTTGGTGCAGTGTTTATTGAGCTCTTCTTTATCCTGACATCAATATGGCTAAACCAGTTCTACTACATCTTTGGCTTCCTTTTCATAGTGTTCATCATCCTATTGATCACCTGTGCTGAGATTACGGTTGTGCTTTGCTACTTCCAGTTGTGCAGTGAAGACTACAATTGGTGGTGGAGAGCTTACCTCACTGCTGGGTCATCAGCTGTGTACCTTTTCCTCTACTCAATTTTCTACTTCTTTACCAAGTTGGAGATTACAAAGCTGGTCTCAGGCATCCTTTACTTTGGGTATATGATAATTGTTTCATATGCCTTCTTTGTTGTGACTGGAACAATTGGCTTCTATGCTTGCTTCTGGTTTGTCCGCAAGATCTACTCTTCTGTGAAAATTGATTGA
Protein sequence

>MS.gene36990.t1

MKEKMMGCTAISVRSTTTTVFFTTLLFLFSSVHSFYLPGVAPRDFQTGDALYVKVNKLSSTKTQLPYDYYYLKYCKPSKIVNSAENLGEVLRGDRIENSIYTFHMRKEQSCTVACHTILDAESAKNFKEKIDDEYRVNMVLDNLPVAVLRQRRDGSQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHKDPETGSARIVGFEVTPNSINHEYKEWNDKNPQVTTCNKDTKNLMQGSTVPQEVDTNKDIVFTYDVSFKESEIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFLSGMVAMIMMRTLYRDIANYNQLDTQDEAQEETGWKLVHGDVFRPPINSNLLCVYVGTGVQIFGMTLVTMIFALLGFLSPSNRGGLMTAMVLLWVFMGLFAGYSSARLYKMFKGTEWKRNTLKTAFMFPGILFGIFFVLNALIWGEQSSGAVPFGTMIALVCLWFGISVPLVFVGSYLGFKKPAIEDPVKTNKIPRQVPEQAWYMTPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFIILLITCAEITVVLCYFQLCSEDYNWWWRAYLTAGSSAVYLFLYSIFYFFTKLEITKLVSGILYFGYMIIVSYAFFVVTGTIGFYACFWFVRKIYSSVKID