Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051485.t1 | XP_003588860.1 | 99 | 602 | 5 | 1 | 3 | 603 | 36 | 637 | 0.00E+00 | 1182.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051485.t1 | F4KIB2 | 85.9 | 603 | 83 | 1 | 3 | 603 | 46 | 648 | 1.3e-305 | 1049.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051485.t1 | G7I879 | 99.0 | 602 | 5 | 1 | 3 | 603 | 36 | 637 | 0.0e+00 | 1182.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051485 | MS.gene27400 | 0.812321 | 4.50E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051485 | MS.gene058486 | PPI |
| MS.gene051485 | MS.gene041418 | PPI |
| MS.gene051485 | MS.gene036639 | PPI |
| MS.gene36542 | MS.gene051485 | PPI |
| MS.gene014910 | MS.gene051485 | PPI |
| MS.gene051485 | MS.gene016086 | PPI |
| MS.gene011190 | MS.gene051485 | PPI |
| MS.gene051485 | MS.gene36990 | PPI |
| MS.gene051485 | MS.gene42664 | PPI |
| MS.gene051485 | MS.gene58761 | PPI |
| MS.gene051485 | MS.gene57710 | PPI |
| MS.gene051485 | MS.gene80181 | PPI |
| MS.gene80184 | MS.gene051485 | PPI |
| MS.gene33117 | MS.gene051485 | PPI |
| MS.gene051485 | MS.gene36992 | PPI |
| MS.gene32702 | MS.gene051485 | PPI |
| MS.gene051485 | MS.gene020254 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051485.t1 | MTR_1g014080 | 99.003 | 602 | 5 | 1 | 3 | 603 | 36 | 637 | 0.0 | 1227 |
| MS.gene051485.t1 | MTR_3g105950 | 91.362 | 602 | 51 | 1 | 3 | 603 | 35 | 636 | 0.0 | 1123 |
| MS.gene051485.t1 | MTR_8g016270 | 76.539 | 601 | 140 | 1 | 4 | 603 | 48 | 648 | 0.0 | 970 |
| MS.gene051485.t1 | MTR_5g098730 | 45.696 | 639 | 290 | 14 | 3 | 603 | 46 | 665 | 2.19e-180 | 526 |
| MS.gene051485.t1 | MTR_3g082140 | 44.866 | 633 | 304 | 12 | 3 | 603 | 40 | 659 | 2.57e-178 | 520 |
| MS.gene051485.t1 | MTR_0204s0010 | 47.598 | 458 | 216 | 7 | 159 | 603 | 2 | 448 | 2.09e-148 | 436 |
| MS.gene051485.t1 | MTR_5g077170 | 32.949 | 607 | 355 | 8 | 3 | 603 | 31 | 591 | 2.75e-114 | 353 |
| MS.gene051485.t1 | MTR_6g074910 | 32.125 | 607 | 358 | 8 | 3 | 603 | 30 | 588 | 2.83e-111 | 345 |
| MS.gene051485.t1 | MTR_8g088730 | 33.442 | 613 | 342 | 9 | 3 | 603 | 31 | 589 | 1.32e-104 | 328 |
| MS.gene051485.t1 | MTR_2g006300 | 33.990 | 609 | 338 | 9 | 5 | 603 | 29 | 583 | 2.46e-102 | 322 |
| MS.gene051485.t1 | MTR_4g053270 | 30.298 | 604 | 365 | 9 | 4 | 601 | 34 | 587 | 8.40e-91 | 292 |
| MS.gene051485.t1 | MTR_7g060560 | 94.915 | 118 | 6 | 0 | 59 | 176 | 274 | 391 | 5.63e-72 | 236 |
| MS.gene051485.t1 | MTR_3g090510 | 94.643 | 112 | 6 | 0 | 65 | 176 | 283 | 394 | 1.05e-68 | 228 |
| MS.gene051485.t1 | MTR_5g014340 | 86.916 | 107 | 9 | 1 | 61 | 167 | 1 | 102 | 7.38e-49 | 171 |
| MS.gene051485.t1 | MTR_0249s0060 | 91.176 | 68 | 6 | 0 | 61 | 128 | 1 | 68 | 9.03e-31 | 115 |
| MS.gene051485.t1 | MTR_4g116770 | 42.857 | 161 | 80 | 5 | 4 | 161 | 37 | 188 | 4.19e-29 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051485.t1 | AT5G10840 | 85.904 | 603 | 83 | 1 | 3 | 603 | 46 | 648 | 0.0 | 1065 |
| MS.gene051485.t1 | AT5G25100 | 84.934 | 604 | 87 | 1 | 4 | 603 | 48 | 651 | 0.0 | 1058 |
| MS.gene051485.t1 | AT5G25100 | 84.793 | 605 | 88 | 1 | 3 | 603 | 40 | 644 | 0.0 | 1058 |
| MS.gene051485.t1 | AT2G24170 | 82.363 | 601 | 105 | 1 | 4 | 603 | 37 | 637 | 0.0 | 1032 |
| MS.gene051485.t1 | AT3G13772 | 76.451 | 603 | 139 | 3 | 3 | 603 | 40 | 641 | 0.0 | 969 |
| MS.gene051485.t1 | AT1G55130 | 74.793 | 603 | 149 | 3 | 3 | 603 | 36 | 637 | 0.0 | 948 |
| MS.gene051485.t1 | AT2G24170 | 78.398 | 412 | 88 | 1 | 4 | 414 | 37 | 448 | 0.0 | 691 |
| MS.gene051485.t1 | AT5G35160 | 45.016 | 642 | 291 | 13 | 4 | 603 | 37 | 658 | 0.0 | 530 |
| MS.gene051485.t1 | AT5G35160 | 45.016 | 642 | 291 | 13 | 4 | 603 | 37 | 658 | 0.0 | 530 |
| MS.gene051485.t1 | AT5G35160 | 45.016 | 642 | 291 | 13 | 4 | 603 | 37 | 658 | 0.0 | 530 |
| MS.gene051485.t1 | AT4G12650 | 45.110 | 634 | 301 | 13 | 3 | 603 | 33 | 652 | 1.87e-173 | 507 |
| MS.gene051485.t1 | AT5G35160 | 44.098 | 610 | 280 | 12 | 35 | 603 | 41 | 630 | 2.48e-166 | 488 |
| MS.gene051485.t1 | AT2G01970 | 33.717 | 608 | 348 | 8 | 3 | 603 | 33 | 592 | 1.29e-121 | 372 |
| MS.gene051485.t1 | AT1G14670 | 33.882 | 608 | 347 | 8 | 3 | 603 | 33 | 592 | 2.84e-114 | 353 |
| MS.gene051485.t1 | AT5G37310 | 32.566 | 608 | 353 | 7 | 4 | 603 | 35 | 593 | 3.45e-111 | 345 |
| MS.gene051485.t1 | AT5G37310 | 32.566 | 608 | 353 | 7 | 4 | 603 | 35 | 593 | 3.45e-111 | 345 |
| MS.gene051485.t1 | AT1G10950 | 34.494 | 603 | 331 | 9 | 11 | 603 | 41 | 589 | 8.93e-104 | 326 |
| MS.gene051485.t1 | AT1G08350 | 31.466 | 607 | 360 | 11 | 4 | 603 | 32 | 589 | 2.17e-100 | 317 |
| MS.gene051485.t1 | AT1G08350 | 31.466 | 607 | 360 | 11 | 4 | 603 | 32 | 589 | 2.17e-100 | 317 |
| MS.gene051485.t1 | AT1G08350 | 30.755 | 556 | 330 | 10 | 54 | 603 | 2 | 508 | 6.35e-87 | 280 |
| MS.gene051485.t1 | AT1G08350 | 30.811 | 555 | 319 | 11 | 4 | 551 | 32 | 528 | 4.92e-86 | 278 |
Find 131 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTTCGGCTTCCTCTTTC+TGG | 0.096633 | 1.3:+8128434 | MS.gene051485:CDS |
| ATCCTGATCCACACGCTTTA+TGG | 0.119105 | 1.3:-8126813 | None:intergenic |
| TCTCTTCTTGTGCTTCTTCT+TGG | 0.188485 | 1.3:-8127789 | None:intergenic |
| TTCATGTACCACGCTTGTTC+AGG | 0.250510 | 1.3:-8128309 | None:intergenic |
| TTGTATTGAATGGTCTGATA+TGG | 0.253856 | 1.3:+8128124 | MS.gene051485:CDS |
| CAATTGAGAACCAGTGAATT+TGG | 0.264042 | 1.3:-8127666 | None:intergenic |
| CTCTTCTTGTGCTTCTTCTT+GGG | 0.281012 | 1.3:-8127788 | None:intergenic |
| ACCATTCAATACAAAGAAAA+TGG | 0.292510 | 1.3:-8128115 | None:intergenic |
| GCTTTGAGGTTAAGCCATTC+AGG | 0.304144 | 1.3:+8127069 | MS.gene051485:CDS |
| AACCTCAAAGCCCACTATTC+TGG | 0.312174 | 1.3:-8127057 | None:intergenic |
| AACATGAATATGAAGGGAAA+TGG | 0.333966 | 1.3:+8127196 | MS.gene051485:CDS |
| TTGGTGGCTATGTTGGATTC+AGG | 0.340881 | 1.3:+8128235 | MS.gene051485:CDS |
| TCTTCATTCTCACCTCAATC+TGG | 0.353616 | 1.3:+8128394 | MS.gene051485:CDS |
| CACATATGATGTTGAATTCC+TGG | 0.357055 | 1.3:+8127320 | MS.gene051485:CDS |
| CTTGTTCAGGGATCTGCCTT+GGG | 0.361865 | 1.3:-8128296 | None:intergenic |
| TTCAACTTCTTGAGGAGTAT+TGG | 0.372089 | 1.3:-8127277 | None:intergenic |
| CACACAACATTGCACATTTG+TGG | 0.372808 | 1.3:-8126591 | None:intergenic |
| ACAATGCTCTTTGCTGTCCT+TGG | 0.391461 | 1.3:+8127919 | MS.gene051485:CDS |
| TATGCCTTCTTTGTTGTAAC+CGG | 0.395161 | 1.3:+8128678 | MS.gene051485:CDS |
| TCATCTGGAGCTGTGCCATT+TGG | 0.398656 | 1.3:+8128156 | MS.gene051485:CDS |
| GATGATTGTCCTCTTTCTCT+CGG | 0.399152 | 1.3:+8127699 | MS.gene051485:CDS |
| GATTCTAGATAACCTTCCTT+TGG | 0.407859 | 1.3:+8126784 | MS.gene051485:CDS |
| TCCCATAAAGCGTGTGGATC+AGG | 0.408601 | 1.3:+8126811 | MS.gene051485:CDS |
| CACTGAATCTGCCAGAATAG+TGG | 0.409116 | 1.3:+8127046 | MS.gene051485:CDS |
| TCCTGATCCACACGCTTTAT+GGG | 0.409906 | 1.3:-8126812 | None:intergenic |
| TTGTGTGTTTATGTTGGTAC+TGG | 0.410260 | 1.3:+8127868 | MS.gene051485:CDS |
| CCGGCCTTCTCAGTTCTGAT+AGG | 0.413755 | 1.3:+8128333 | MS.gene051485:CDS |
| CAACTTCGTGATTTCAAGCT+TGG | 0.416283 | 1.3:-8128613 | None:intergenic |
| TATTGAAAATTCACGTTATG+TGG | 0.420978 | 1.3:+8126453 | MS.gene051485:CDS |
| GATTCTACTGTTTATCAGCT+TGG | 0.421408 | 1.3:+8126833 | MS.gene051485:CDS |
| AGTAATCCTCACTGCACAAC+TGG | 0.425366 | 1.3:-8128512 | None:intergenic |
| ACATGAATATGAAGGGAAAT+GGG | 0.426030 | 1.3:+8127197 | MS.gene051485:CDS |
| ATTAGCCCACCTCTGTTTGA+AGG | 0.427160 | 1.3:-8127952 | None:intergenic |
| GCTTGTTCAGGGATCTGCCT+TGG | 0.428645 | 1.3:-8128297 | None:intergenic |
| TGCCAGAATAGTGGGCTTTG+AGG | 0.438212 | 1.3:+8127055 | MS.gene051485:CDS |
| CACAACAGATCTGAGTTGTT+TGG | 0.439121 | 1.3:-8127850 | None:intergenic |
| TTGGATAGTGCTGAAAATCT+TGG | 0.448087 | 1.3:+8126409 | MS.gene051485:CDS |
| TGTATTGAATGGTCTGATAT+GGG | 0.449462 | 1.3:+8128125 | MS.gene051485:CDS |
| TTTGTTGTAACCGGCACCAT+TGG | 0.456580 | 1.3:+8128687 | MS.gene051485:CDS |
| GGAAGTGAATAATATGTGTA+TGG | 0.459005 | 1.3:-8126364 | None:intergenic |
| ATATGGGGACAAAAGTCATC+TGG | 0.459129 | 1.3:+8128141 | MS.gene051485:CDS |
| TATCAGCTTGGTTTCCATGT+TGG | 0.460613 | 1.3:+8126845 | MS.gene051485:CDS |
| CGGCCTTCTCAGTTCTGATA+GGG | 0.462225 | 1.3:+8128334 | MS.gene051485:CDS |
| GTCATCATTCATCAGCAGAT+AGG | 0.462860 | 1.3:-8127644 | None:intergenic |
| TGTCCTCTTTCTCTCGGGCA+TGG | 0.464468 | 1.3:+8127705 | MS.gene051485:CDS |
| ATGATTGTCCTCTTTCTCTC+GGG | 0.466449 | 1.3:+8127700 | MS.gene051485:CDS |
| AATAATATGTGTATGGAAGC+TGG | 0.475548 | 1.3:-8126357 | None:intergenic |
| TGGCGCTCTTACCTCACATC+TGG | 0.475574 | 1.3:+8128543 | MS.gene051485:CDS |
| TTTCCCTCTTCAACTTCTTG+AGG | 0.477051 | 1.3:-8127285 | None:intergenic |
| ATTCCAATATTACATGGTGC+AGG | 0.478776 | 1.3:+8126288 | None:intergenic |
| TCAATGAAAACAGCTCCAAA+TGG | 0.478934 | 1.3:-8128366 | None:intergenic |
| GAAGATTGATGATGAGTATC+GGG | 0.480629 | 1.3:+8126656 | MS.gene051485:CDS |
| GACAGCTATGCTCTTGCTAT+GGG | 0.482841 | 1.3:+8127975 | MS.gene051485:CDS |
| AAAATGGCAGAGACAGAGGC+AGG | 0.487505 | 1.3:-8128099 | None:intergenic |
| GGTTTCCATGTTGGACTCAA+AGG | 0.490497 | 1.3:+8126854 | MS.gene051485:CDS |
| TGACAGCTATGCTCTTGCTA+TGG | 0.490539 | 1.3:+8127974 | MS.gene051485:CDS |
| TCATGTACCACGCTTGTTCA+GGG | 0.491346 | 1.3:-8128308 | None:intergenic |
| AGAATGTTGCATAAAGAAAG+AGG | 0.493377 | 1.3:-8128581 | None:intergenic |
| CCACCATGCCCGAGAGAAAG+AGG | 0.498120 | 1.3:-8127708 | None:intergenic |
| CTTTCTCCTTCAAACAGAGG+TGG | 0.502130 | 1.3:+8127946 | MS.gene051485:CDS |
| GATCTGTTGTGTGTTTATGT+TGG | 0.504784 | 1.3:+8127862 | MS.gene051485:CDS |
| CACCTCTGTTTGAAGGAGAA+AGG | 0.505594 | 1.3:-8127945 | None:intergenic |
| GACAACTGTATGTTTAGCAT+GGG | 0.507896 | 1.3:-8127250 | None:intergenic |
| GGACTCAAAGGACAATATAG+TGG | 0.508903 | 1.3:+8126866 | MS.gene051485:CDS |
| CAATGAAAACAGCTCCAAAT+GGG | 0.511643 | 1.3:-8128365 | None:intergenic |
| AGTGTTAAACATGAATATGA+AGG | 0.511795 | 1.3:+8127189 | MS.gene051485:intron |
| AGAAGATTGATGATGAGTAT+CGG | 0.514607 | 1.3:+8126655 | MS.gene051485:CDS |
| CGCTTTATGGGAACAACCAA+AGG | 0.515207 | 1.3:-8126800 | None:intergenic |
| AGAGCAAACATTGTTCCAAA+TGG | 0.527819 | 1.3:-8128171 | None:intergenic |
| CCTATCAGAACTGAGAAGGC+CGG | 0.533053 | 1.3:-8128333 | None:intergenic |
| TTTCTCCTTCAAACAGAGGT+GGG | 0.533866 | 1.3:+8127947 | MS.gene051485:CDS |
| CTATCAGAACTGAGAAGGCC+GGG | 0.534233 | 1.3:-8128332 | None:intergenic |
| GACTCAAAGGACAATATAGT+GGG | 0.535283 | 1.3:+8126867 | MS.gene051485:CDS |
| AAGCACAAGAAGAGACTGGT+TGG | 0.539709 | 1.3:+8127797 | MS.gene051485:CDS |
| TGCGTAAAATCCAATGGTGC+CGG | 0.543229 | 1.3:-8128697 | None:intergenic |
| TCAAGAAGTTGAAGAGGGAA+AGG | 0.543806 | 1.3:+8127287 | MS.gene051485:CDS |
| GTATCTGCAATATTATACTT+CGG | 0.545739 | 1.3:+8128636 | MS.gene051485:CDS |
| TGACAACTGTATGTTTAGCA+TGG | 0.550993 | 1.3:-8127251 | None:intergenic |
| ACTGAATCTGCCAGAATAGT+GGG | 0.555697 | 1.3:+8127047 | MS.gene051485:CDS |
| ATTTGACAGTAAATGCCAAA+TGG | 0.557238 | 1.3:-8127007 | None:intergenic |
| GGTTGTTCCCATAAAGCGTG+TGG | 0.557317 | 1.3:+8126805 | MS.gene051485:CDS |
| CATTGTACTTTGAAATATCA+CGG | 0.557682 | 1.3:-8127756 | None:intergenic |
| AACAGATCTGAGTTGTTTGG+TGG | 0.557705 | 1.3:-8127847 | None:intergenic |
| GGATGACGAAGACCAGAAAG+AGG | 0.558905 | 1.3:-8128446 | None:intergenic |
| CGCTTATACAAAATGTTCAA+AGG | 0.560242 | 1.3:+8128033 | MS.gene051485:CDS |
| ATGTGAAGTGGGCTTCAAGA+TGG | 0.563049 | 1.3:+8127617 | MS.gene051485:CDS |
| GAAGAAGCACAAGAAGAGAC+TGG | 0.567424 | 1.3:+8127793 | MS.gene051485:CDS |
| AAACTGATTCAACCAGATTG+AGG | 0.568595 | 1.3:-8128406 | None:intergenic |
| TTCCTTTCTCCTTCAAACAG+AGG | 0.571385 | 1.3:+8127943 | MS.gene051485:CDS |
| TACTCCTCAAGAAGTTGAAG+AGG | 0.574236 | 1.3:+8127281 | MS.gene051485:CDS |
| CAAGCTTGAAATCACGAAGT+TGG | 0.580482 | 1.3:+8128614 | MS.gene051485:CDS |
| GTGAGGATTACTTGTGGTGG+TGG | 0.581791 | 1.3:+8128523 | MS.gene051485:CDS |
| AGTGGAAGAAAATTTCCCTC+AGG | 0.592786 | 1.3:+8128061 | MS.gene051485:CDS |
| CACAGACATACAGACCTGAA+TGG | 0.593857 | 1.3:-8127083 | None:intergenic |
| GAACAAGACTGCAGTCCTGA+GGG | 0.595951 | 1.3:-8128076 | None:intergenic |
| ATAATATGTGTATGGAAGCT+GGG | 0.597147 | 1.3:-8126356 | None:intergenic |
| AAAGAAAATGGCAGAGACAG+AGG | 0.604759 | 1.3:-8128103 | None:intergenic |
| ACAACTGTATGTTTAGCATG+GGG | 0.606268 | 1.3:-8127249 | None:intergenic |
| TTCCAATATTACATGGTGCA+GGG | 0.609018 | 1.3:+8126289 | None:intergenic |
| TGTGAAGTGGGCTTCAAGAT+GGG | 0.611136 | 1.3:+8127618 | MS.gene051485:CDS |
| GCCTTCTCAGTTCTGATAGG+GGG | 0.611204 | 1.3:+8128336 | MS.gene051485:CDS |
| GTGTTAAACATGAATATGAA+GGG | 0.614070 | 1.3:+8127190 | MS.gene051485:intron |
| GGCCTTCTCAGTTCTGATAG+GGG | 0.615040 | 1.3:+8128335 | MS.gene051485:CDS |
| CTACTTCCAGTTGTGCAGTG+AGG | 0.617050 | 1.3:+8128506 | MS.gene051485:CDS |
| TTGAAGGAGAAAGGAATCCA+AGG | 0.617531 | 1.3:-8127936 | None:intergenic |
| GGTGCCGGTTACAACAAAGA+AGG | 0.620039 | 1.3:-8128682 | None:intergenic |
| TTATGGGAACAACCAAAGGA+AGG | 0.622552 | 1.3:-8126796 | None:intergenic |
| ATTGTCCTTTGAGTCCAACA+TGG | 0.625666 | 1.3:-8126859 | None:intergenic |
| ACTCCTCAAGAAGTTGAAGA+GGG | 0.626156 | 1.3:+8127282 | MS.gene051485:CDS |
| TGCAGGAGAGTGATGTGAAG+TGG | 0.630793 | 1.3:+8127605 | MS.gene051485:intron |
| TGAATGATGACCAAATTCAC+TGG | 0.630891 | 1.3:+8127656 | MS.gene051485:CDS |
| AAAGCATGCGTAAAATCCAA+TGG | 0.631715 | 1.3:-8128703 | None:intergenic |
| GGAACAAGACTGCAGTCCTG+AGG | 0.632360 | 1.3:-8128077 | None:intergenic |
| CCTCTTTCTCTCGGGCATGG+TGG | 0.636806 | 1.3:+8127708 | MS.gene051485:CDS |
| TGAAAACAAACAAAATCCCA+AGG | 0.637171 | 1.3:+8128280 | MS.gene051485:CDS |
| GTATTGAATGGTCTGATATG+GGG | 0.638197 | 1.3:+8128126 | MS.gene051485:CDS |
| GGCAGATCCCTGAACAAGCG+TGG | 0.641948 | 1.3:+8128301 | MS.gene051485:CDS |
| GCAGGAGAGTGATGTGAAGT+GGG | 0.642804 | 1.3:+8127606 | MS.gene051485:intron |
| ACTGGTTGGAAGCTTGTCCA+TGG | 0.644200 | 1.3:+8127811 | MS.gene051485:CDS |
| ACAAGCGTGGTACATGAACC+CGG | 0.649898 | 1.3:+8128314 | MS.gene051485:CDS |
| GCAGTGAGGATTACTTGTGG+TGG | 0.656188 | 1.3:+8128520 | MS.gene051485:CDS |
| AAATGGCAGAGACAGAGGCA+GGG | 0.659868 | 1.3:-8128098 | None:intergenic |
| GTGCAGAAGAGCCAGATGTG+AGG | 0.677656 | 1.3:-8128554 | None:intergenic |
| AAATGTTCAAAGGATCAGAG+TGG | 0.690463 | 1.3:+8128043 | MS.gene051485:CDS |
| TGTGCAGTGAGGATTACTTG+TGG | 0.692738 | 1.3:+8128517 | MS.gene051485:CDS |
| CAACTGTATGTTTAGCATGG+GGG | 0.696889 | 1.3:-8127248 | None:intergenic |
| TTTCTGCACAAGTGATAACG+AGG | 0.700675 | 1.3:-8128467 | None:intergenic |
| TTGAAATACACAGAGCAAGG+AGG | 0.723557 | 1.3:+8126965 | MS.gene051485:intron |
| ACTCAAAGGACAATATAGTG+GGG | 0.752368 | 1.3:+8126868 | MS.gene051485:CDS |
| CTGGAAGTAGCAAAGCACGA+CGG | 0.762251 | 1.3:-8128493 | None:intergenic |
| AATCTTGGAGAAGTGCTCCG+TGG | 0.794103 | 1.3:+8126424 | MS.gene051485:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATAACAATAACAAT+TGG | - | chr1.3:8127533-8127552 | None:intergenic | 10.0% |
| !!! | TATTCTTCTCTAATTATTTT+TGG | + | chr1.3:8127471-8127490 | MS.gene051485:intron | 15.0% |
| ! | AAACCATATATTTAACCACT+TGG | - | chr1.3:8127413-8127432 | None:intergenic | 25.0% |
| ! | AAGTGGTTAAATATATGGTT+TGG | + | chr1.3:8127412-8127431 | MS.gene051485:intron | 25.0% |
| ! | ACCATTCAATACAAAGAAAA+TGG | - | chr1.3:8128118-8128137 | None:intergenic | 25.0% |
| ! | AGTGGTTAAATATATGGTTT+GGG | + | chr1.3:8127413-8127432 | MS.gene051485:intron | 25.0% |
| ! | AGTGTTAAACATGAATATGA+AGG | + | chr1.3:8127189-8127208 | MS.gene051485:intron | 25.0% |
| ! | CACAAGAAGAAGAAAAAAAT+TGG | - | chr1.3:8126936-8126955 | None:intergenic | 25.0% |
| ! | GGAAATATAAGACAATTTAC+TGG | - | chr1.3:8126699-8126718 | None:intergenic | 25.0% |
| ! | GTATCTGCAATATTATACTT+CGG | + | chr1.3:8128636-8128655 | MS.gene051485:CDS | 25.0% |
| ! | GTGTTAAACATGAATATGAA+GGG | + | chr1.3:8127190-8127209 | MS.gene051485:intron | 25.0% |
| ! | TAAATTGTCTTATATTTCCG+TGG | + | chr1.3:8126700-8126719 | MS.gene051485:intron | 25.0% |
| ! | TATTGAAAATTCACGTTATG+TGG | + | chr1.3:8126453-8126472 | MS.gene051485:CDS | 25.0% |
| !! | AATCAGTTTTACTACATCTT+CGG | + | chr1.3:8128420-8128439 | MS.gene051485:CDS | 25.0% |
| !! | CTTTGAACATTTTGTATAAG+CGG | - | chr1.3:8128035-8128054 | None:intergenic | 25.0% |
| !! | TTTGAACATTTTGTATAAGC+GGG | - | chr1.3:8128034-8128053 | None:intergenic | 25.0% |
| !!! | ATTTTAGTGAAAGATGATGA+TGG | + | chr1.3:8127548-8127567 | MS.gene051485:intron | 25.0% |
| !!! | CATTGTACTTTGAAATATCA+CGG | - | chr1.3:8127759-8127778 | None:intergenic | 25.0% |
| !!! | GTTTTTTATACACAACCATT+TGG | + | chr1.3:8126992-8127011 | MS.gene051485:CDS | 25.0% |
| !!! | TATGCATTCTTACTGATTTT+CGG | + | chr1.3:8127148-8127167 | MS.gene051485:intron | 25.0% |
| AACATGAATATGAAGGGAAA+TGG | + | chr1.3:8127196-8127215 | MS.gene051485:CDS | 30.0% | |
| AATAATATGTGTATGGAAGC+TGG | - | chr1.3:8126360-8126379 | None:intergenic | 30.0% | |
| ACATGAATATGAAGGGAAAT+GGG | + | chr1.3:8127197-8127216 | MS.gene051485:CDS | 30.0% | |
| AGAATGTTGCATAAAGAAAG+AGG | - | chr1.3:8128584-8128603 | None:intergenic | 30.0% | |
| ATAATATGTGTATGGAAGCT+GGG | - | chr1.3:8126359-8126378 | None:intergenic | 30.0% | |
| ATGCCAAGTGGTTAAATATA+TGG | + | chr1.3:8127407-8127426 | MS.gene051485:intron | 30.0% | |
| ATTTGACAGTAAATGCCAAA+TGG | - | chr1.3:8127010-8127029 | None:intergenic | 30.0% | |
| CGCTTATACAAAATGTTCAA+AGG | + | chr1.3:8128033-8128052 | MS.gene051485:CDS | 30.0% | |
| GACATGTTATTGTTAACACT+TGG | + | chr1.3:8126488-8126507 | MS.gene051485:intron | 30.0% | |
| GATCTTCAATATCAAGATAG+TGG | - | chr1.3:8126736-8126755 | None:intergenic | 30.0% | |
| GGAAGTGAATAATATGTGTA+TGG | - | chr1.3:8126367-8126386 | None:intergenic | 30.0% | |
| TACTACGTTTGAATACCTAT+TGG | + | chr1.3:8127377-8127396 | MS.gene051485:intron | 30.0% | |
| TGAAAACAAACAAAATCCCA+AGG | + | chr1.3:8128280-8128299 | MS.gene051485:CDS | 30.0% | |
| TGTATTGAATGGTCTGATAT+GGG | + | chr1.3:8128125-8128144 | MS.gene051485:CDS | 30.0% | |
| TTGTATTGAATGGTCTGATA+TGG | + | chr1.3:8128124-8128143 | MS.gene051485:CDS | 30.0% | |
| TTTATTAAGATGATCTCACC+AGG | - | chr1.3:8127341-8127360 | None:intergenic | 30.0% | |
| ! | AATTTTCAATACGATCACCA+CGG | - | chr1.3:8126444-8126463 | None:intergenic | 30.0% |
| ! | TGTTTGCTCTGATCTTTTTA+TGG | + | chr1.3:8128184-8128203 | MS.gene051485:CDS | 30.0% |
| ! | TTTGAATGCTTTTGCAGTTT+TGG | - | chr1.3:8126634-8126653 | None:intergenic | 30.0% |
| !! | AGAAGATTGATGATGAGTAT+CGG | + | chr1.3:8126655-8126674 | MS.gene051485:CDS | 30.0% |
| !! | GCCATTTTCTTTGTATTGAA+TGG | + | chr1.3:8128114-8128133 | MS.gene051485:CDS | 30.0% |
| !!! | ACTATCCAAGATTTTTTCTG+GGG | - | chr1.3:8126398-8126417 | None:intergenic | 30.0% |
| !!! | CACTATCCAAGATTTTTTCT+GGG | - | chr1.3:8126399-8126418 | None:intergenic | 30.0% |
| AAAGCATGCGTAAAATCCAA+TGG | - | chr1.3:8128706-8128725 | None:intergenic | 35.0% | |
| AAATGTTCAAAGGATCAGAG+TGG | + | chr1.3:8128043-8128062 | MS.gene051485:CDS | 35.0% | |
| ACAACTGTATGTTTAGCATG+GGG | - | chr1.3:8127252-8127271 | None:intergenic | 35.0% | |
| ACTCAAAGGACAATATAGTG+GGG | + | chr1.3:8126868-8126887 | MS.gene051485:CDS | 35.0% | |
| AGAGCAAACATTGTTCCAAA+TGG | - | chr1.3:8128174-8128193 | None:intergenic | 35.0% | |
| ATGTTGAAATACACAGAGCA+AGG | + | chr1.3:8126962-8126981 | MS.gene051485:intron | 35.0% | |
| CAATGAAAACAGCTCCAAAT+GGG | - | chr1.3:8128368-8128387 | None:intergenic | 35.0% | |
| CAATTGAGAACCAGTGAATT+TGG | - | chr1.3:8127669-8127688 | None:intergenic | 35.0% | |
| CACATATGATGTTGAATTCC+TGG | + | chr1.3:8127320-8127339 | MS.gene051485:CDS | 35.0% | |
| GACAACTGTATGTTTAGCAT+GGG | - | chr1.3:8127253-8127272 | None:intergenic | 35.0% | |
| GACTCAAAGGACAATATAGT+GGG | + | chr1.3:8126867-8126886 | MS.gene051485:CDS | 35.0% | |
| GATCTGTTGTGTGTTTATGT+TGG | + | chr1.3:8127862-8127881 | MS.gene051485:CDS | 35.0% | |
| GATTCTACTGTTTATCAGCT+TGG | + | chr1.3:8126833-8126852 | MS.gene051485:CDS | 35.0% | |
| GATTCTAGATAACCTTCCTT+TGG | + | chr1.3:8126784-8126803 | MS.gene051485:CDS | 35.0% | |
| GTATTGAATGGTCTGATATG+GGG | + | chr1.3:8128126-8128145 | MS.gene051485:CDS | 35.0% | |
| TCAATGAAAACAGCTCCAAA+TGG | - | chr1.3:8128369-8128388 | None:intergenic | 35.0% | |
| TGAATGATGACCAAATTCAC+TGG | + | chr1.3:8127656-8127675 | MS.gene051485:CDS | 35.0% | |
| TGACAACTGTATGTTTAGCA+TGG | - | chr1.3:8127254-8127273 | None:intergenic | 35.0% | |
| TGTTATTGTTAACACTTGGC+TGG | + | chr1.3:8126492-8126511 | MS.gene051485:intron | 35.0% | |
| TTGTGTGTTTATGTTGGTAC+TGG | + | chr1.3:8127868-8127887 | MS.gene051485:CDS | 35.0% | |
| ! | AAACTGATTCAACCAGATTG+AGG | - | chr1.3:8128409-8128428 | None:intergenic | 35.0% |
| ! | GCTCTGATCTTTTTATGGTT+TGG | + | chr1.3:8128189-8128208 | MS.gene051485:CDS | 35.0% |
| ! | GGTTAAATATATGGTTTGGG+CGG | + | chr1.3:8127416-8127435 | MS.gene051485:intron | 35.0% |
| ! | TATGCCTTCTTTGTTGTAAC+CGG | + | chr1.3:8128678-8128697 | MS.gene051485:CDS | 35.0% |
| ! | TTCAACTTCTTGAGGAGTAT+TGG | - | chr1.3:8127280-8127299 | None:intergenic | 35.0% |
| ! | TTCACAGGATTTTCAATTGC+AGG | - | chr1.3:8128264-8128283 | None:intergenic | 35.0% |
| ! | TTGGATAGTGCTGAAAATCT+TGG | + | chr1.3:8126409-8126428 | MS.gene051485:CDS | 35.0% |
| ! | TTGGATTTTACGCATGCTTT+TGG | + | chr1.3:8128706-8128725 | MS.gene051485:CDS | 35.0% |
| !! | GAAGATTGATGATGAGTATC+GGG | + | chr1.3:8126656-8126675 | MS.gene051485:CDS | 35.0% |
| !! | GGGATTTTGTTTGTTTTCAC+AGG | - | chr1.3:8128279-8128298 | None:intergenic | 35.0% |
| !! | TTGTCCATGGTGATGTTTTT+AGG | + | chr1.3:8127824-8127843 | MS.gene051485:CDS | 35.0% |
| !!! | ATTTTTTCTGGGGGACAATA+AGG | - | chr1.3:8126388-8126407 | None:intergenic | 35.0% |
| !!! | CTATCCAAGATTTTTTCTGG+GGG | - | chr1.3:8126397-8126416 | None:intergenic | 35.0% |
| !!! | GCACTATCCAAGATTTTTTC+TGG | - | chr1.3:8126400-8126419 | None:intergenic | 35.0% |
| !!! | GTACTGGTGTTCAGTTTTTT+GGG | + | chr1.3:8127884-8127903 | MS.gene051485:CDS | 35.0% |
| !!! | TCAGTTCCACTTGTTTTTGT+TGG | + | chr1.3:8128216-8128235 | MS.gene051485:CDS | 35.0% |
| AAAGAAAATGGCAGAGACAG+AGG | - | chr1.3:8128106-8128125 | None:intergenic | 40.0% | |
| AACAGATCTGAGTTGTTTGG+TGG | - | chr1.3:8127850-8127869 | None:intergenic | 40.0% | |
| ACTCCTCAAGAAGTTGAAGA+GGG | + | chr1.3:8127282-8127301 | MS.gene051485:CDS | 40.0% | |
| ACTGAATCTGCCAGAATAGT+GGG | + | chr1.3:8127047-8127066 | MS.gene051485:CDS | 40.0% | |
| AGTGGAAGAAAATTTCCCTC+AGG | + | chr1.3:8128061-8128080 | MS.gene051485:CDS | 40.0% | |
| ATAGTGGCAGAAAATAGCCA+CGG | - | chr1.3:8126720-8126739 | None:intergenic | 40.0% | |
| ATATGGGGACAAAAGTCATC+TGG | + | chr1.3:8128141-8128160 | MS.gene051485:CDS | 40.0% | |
| ATGATTGTCCTCTTTCTCTC+GGG | + | chr1.3:8127700-8127719 | MS.gene051485:CDS | 40.0% | |
| ATTGTCCTTTGAGTCCAACA+TGG | - | chr1.3:8126862-8126881 | None:intergenic | 40.0% | |
| CAACTGTATGTTTAGCATGG+GGG | - | chr1.3:8127251-8127270 | None:intergenic | 40.0% | |
| CAACTTCGTGATTTCAAGCT+TGG | - | chr1.3:8128616-8128635 | None:intergenic | 40.0% | |
| CAAGCTTGAAATCACGAAGT+TGG | + | chr1.3:8128614-8128633 | MS.gene051485:CDS | 40.0% | |
| CACAACAGATCTGAGTTGTT+TGG | - | chr1.3:8127853-8127872 | None:intergenic | 40.0% | |
| CACACAACATTGCACATTTG+TGG | - | chr1.3:8126594-8126613 | None:intergenic | 40.0% | |
| CTCTTCTTGTGCTTCTTCTT+GGG | - | chr1.3:8127791-8127810 | None:intergenic | 40.0% | |
| GATAATTGTGTTGTGGTCAG+TGG | + | chr1.3:8126514-8126533 | MS.gene051485:intron | 40.0% | |
| GATGATTGTCCTCTTTCTCT+CGG | + | chr1.3:8127699-8127718 | MS.gene051485:CDS | 40.0% | |
| GGACTCAAAGGACAATATAG+TGG | + | chr1.3:8126866-8126885 | MS.gene051485:CDS | 40.0% | |
| GTAAGAATGCATACCACAAC+TGG | - | chr1.3:8127141-8127160 | None:intergenic | 40.0% | |
| GTCATCATTCATCAGCAGAT+AGG | - | chr1.3:8127647-8127666 | None:intergenic | 40.0% | |
| TACTCCTCAAGAAGTTGAAG+AGG | + | chr1.3:8127281-8127300 | MS.gene051485:CDS | 40.0% | |
| TAGCCACCAACAAAAACAAG+TGG | - | chr1.3:8128225-8128244 | None:intergenic | 40.0% | |
| TATCAGCTTGGTTTCCATGT+TGG | + | chr1.3:8126845-8126864 | MS.gene051485:CDS | 40.0% | |
| TCAAGAAGTTGAAGAGGGAA+AGG | + | chr1.3:8127287-8127306 | MS.gene051485:CDS | 40.0% | |
| TCTCTTCTTGTGCTTCTTCT+TGG | - | chr1.3:8127792-8127811 | None:intergenic | 40.0% | |
| TCTTCATTCTCACCTCAATC+TGG | + | chr1.3:8128394-8128413 | MS.gene051485:CDS | 40.0% | |
| TTATGGGAACAACCAAAGGA+AGG | - | chr1.3:8126799-8126818 | None:intergenic | 40.0% | |
| TTCCTTTCTCCTTCAAACAG+AGG | + | chr1.3:8127943-8127962 | MS.gene051485:CDS | 40.0% | |
| TTGAAATACACAGAGCAAGG+AGG | + | chr1.3:8126965-8126984 | MS.gene051485:intron | 40.0% | |
| TTGAAGGAGAAAGGAATCCA+AGG | - | chr1.3:8127939-8127958 | None:intergenic | 40.0% | |
| TTGGCTGGATAATTGTGTTG+TGG | + | chr1.3:8126507-8126526 | MS.gene051485:intron | 40.0% | |
| TTGTCCCCCAGAAAAAATCT+TGG | + | chr1.3:8126390-8126409 | MS.gene051485:CDS | 40.0% | |
| TTTCCCTCTTCAACTTCTTG+AGG | - | chr1.3:8127288-8127307 | None:intergenic | 40.0% | |
| TTTCTCCTTCAAACAGAGGT+GGG | + | chr1.3:8127947-8127966 | MS.gene051485:CDS | 40.0% | |
| ! | GTTTTCATGGGGATTTTTGC+TGG | + | chr1.3:8127997-8128016 | MS.gene051485:CDS | 40.0% |
| ! | TCTAGAATCCTGCACATAGA+AGG | - | chr1.3:8126773-8126792 | None:intergenic | 40.0% |
| ! | TTTCTGCACAAGTGATAACG+AGG | - | chr1.3:8128470-8128489 | None:intergenic | 40.0% |
| !! | CTCTTGCTATGGGTTTTCAT+GGG | + | chr1.3:8127985-8128004 | MS.gene051485:CDS | 40.0% |
| !! | TCTTGCTATGGGTTTTCATG+GGG | + | chr1.3:8127986-8128005 | MS.gene051485:CDS | 40.0% |
| !!! | GGTACTGGTGTTCAGTTTTT+TGG | + | chr1.3:8127883-8127902 | MS.gene051485:CDS | 40.0% |
| !!! | GTTCCACTTGTTTTTGTTGG+TGG | + | chr1.3:8128219-8128238 | MS.gene051485:CDS | 40.0% |
| !!! | GTTTTTGTTGGTGGCTATGT+TGG | + | chr1.3:8128228-8128247 | MS.gene051485:CDS | 40.0% |
| AACCTCAAAGCCCACTATTC+TGG | - | chr1.3:8127060-8127079 | None:intergenic | 45.0% | |
| AAGCACAAGAAGAGACTGGT+TGG | + | chr1.3:8127797-8127816 | MS.gene051485:CDS | 45.0% | |
| AGTAATCCTCACTGCACAAC+TGG | - | chr1.3:8128515-8128534 | None:intergenic | 45.0% | |
| ATAGGGGGAATACTCCCATT+TGG | + | chr1.3:8128351-8128370 | MS.gene051485:CDS | 45.0% | |
| ATCCTGATCCACACGCTTTA+TGG | - | chr1.3:8126816-8126835 | None:intergenic | 45.0% | |
| ATCCTGCACATAGAAGGTAG+AGG | - | chr1.3:8126767-8126786 | None:intergenic | 45.0% | |
| ATTAGCCCACCTCTGTTTGA+AGG | - | chr1.3:8127955-8127974 | None:intergenic | 45.0% | |
| ATTTACCTCTGCCTACTTGC+AGG | + | chr1.3:8127588-8127607 | MS.gene051485:intron | 45.0% | |
| CACAGACATACAGACCTGAA+TGG | - | chr1.3:8127086-8127105 | None:intergenic | 45.0% | |
| CACCTCTGTTTGAAGGAGAA+AGG | - | chr1.3:8127948-8127967 | None:intergenic | 45.0% | |
| CACTGAATCTGCCAGAATAG+TGG | + | chr1.3:8127046-8127065 | MS.gene051485:CDS | 45.0% | |
| CGCTTTATGGGAACAACCAA+AGG | - | chr1.3:8126803-8126822 | None:intergenic | 45.0% | |
| CTTGGCATATGCAAGCCAAT+AGG | - | chr1.3:8127395-8127414 | None:intergenic | 45.0% | |
| CTTTCTCCTTCAAACAGAGG+TGG | + | chr1.3:8127946-8127965 | MS.gene051485:CDS | 45.0% | |
| GGTTTCCATGTTGGACTCAA+AGG | + | chr1.3:8126854-8126873 | MS.gene051485:CDS | 45.0% | |
| GTGGCCTAAAAACATCACCA+TGG | - | chr1.3:8127831-8127850 | None:intergenic | 45.0% | |
| TCAGTCTGTCAAACCAGTTG+TGG | + | chr1.3:8127125-8127144 | MS.gene051485:intron | 45.0% | |
| TCATGTACCACGCTTGTTCA+GGG | - | chr1.3:8128311-8128330 | None:intergenic | 45.0% | |
| TCCTGATCCACACGCTTTAT+GGG | - | chr1.3:8126815-8126834 | None:intergenic | 45.0% | |
| TGACAGCTATGCTCTTGCTA+TGG | + | chr1.3:8127974-8127993 | MS.gene051485:CDS | 45.0% | |
| TGCAAGTAGGCAGAGGTAAA+TGG | - | chr1.3:8127589-8127608 | None:intergenic | 45.0% | |
| TGCGTAAAATCCAATGGTGC+CGG | - | chr1.3:8128700-8128719 | None:intergenic | 45.0% | |
| TGTGCAGTGAGGATTACTTG+TGG | + | chr1.3:8128517-8128536 | MS.gene051485:CDS | 45.0% | |
| TTCATGTACCACGCTTGTTC+AGG | - | chr1.3:8128312-8128331 | None:intergenic | 45.0% | |
| ! | ACAATGCTCTTTGCTGTCCT+TGG | + | chr1.3:8127919-8127938 | MS.gene051485:CDS | 45.0% |
| ! | ATGTGAAGTGGGCTTCAAGA+TGG | + | chr1.3:8127617-8127636 | MS.gene051485:CDS | 45.0% |
| ! | GAAGAAGCACAAGAAGAGAC+TGG | + | chr1.3:8127793-8127812 | MS.gene051485:CDS | 45.0% |
| ! | GACAGCTATGCTCTTGCTAT+GGG | + | chr1.3:8127975-8127994 | MS.gene051485:CDS | 45.0% |
| ! | TGTGAAGTGGGCTTCAAGAT+GGG | + | chr1.3:8127618-8127637 | MS.gene051485:CDS | 45.0% |
| ! | TTGGTGGCTATGTTGGATTC+AGG | + | chr1.3:8128235-8128254 | MS.gene051485:CDS | 45.0% |
| ! | TTTGTTGTAACCGGCACCAT+TGG | + | chr1.3:8128687-8128706 | MS.gene051485:CDS | 45.0% |
| !! | ATTGGCTTGCATATGCCAAG+TGG | + | chr1.3:8127395-8127414 | MS.gene051485:intron | 45.0% |
| !! | GAGTATCGGGTGAACATGTA+CGG | + | chr1.3:8126669-8126688 | MS.gene051485:intron | 45.0% |
| !! | GCTCTTGCTATGGGTTTTCA+TGG | + | chr1.3:8127984-8128003 | MS.gene051485:CDS | 45.0% |
| !! | GCTTTGAGGTTAAGCCATTC+AGG | + | chr1.3:8127069-8127088 | MS.gene051485:CDS | 45.0% |
| !!! | ACGCATGCTTTTGGTTCACA+AGG | + | chr1.3:8128715-8128734 | MS.gene051485:CDS | 45.0% |
| AAAATGGCAGAGACAGAGGC+AGG | - | chr1.3:8128102-8128121 | None:intergenic | 50.0% | |
| AAATGGCAGAGACAGAGGCA+GGG | - | chr1.3:8128101-8128120 | None:intergenic | 50.0% | |
| ACAAGCGTGGTACATGAACC+CGG | + | chr1.3:8128314-8128333 | MS.gene051485:CDS | 50.0% | |
| ACTGGTTGGAAGCTTGTCCA+TGG | + | chr1.3:8127811-8127830 | MS.gene051485:CDS | 50.0% | |
| ATGTTTAGCATGGGGGTCAC+AGG | - | chr1.3:8127244-8127263 | None:intergenic | 50.0% | |
| CACATCACTCTCCTGCAAGT+AGG | - | chr1.3:8127602-8127621 | None:intergenic | 50.0% | |
| CATCTTCGGCTTCCTCTTTC+TGG | + | chr1.3:8128434-8128453 | MS.gene051485:CDS | 50.0% | |
| CCTATCAGAACTGAGAAGGC+CGG | - | chr1.3:8128336-8128355 | None:intergenic | 50.0% | |
| CTACTTCCAGTTGTGCAGTG+AGG | + | chr1.3:8128506-8128525 | MS.gene051485:CDS | 50.0% | |
| CTATCAGAACTGAGAAGGCC+GGG | - | chr1.3:8128335-8128354 | None:intergenic | 50.0% | |
| CTGGAAGTAGCAAAGCACGA+CGG | - | chr1.3:8128496-8128515 | None:intergenic | 50.0% | |
| CTTGTTCAGGGATCTGCCTT+GGG | - | chr1.3:8128299-8128318 | None:intergenic | 50.0% | |
| GAACAAGACTGCAGTCCTGA+GGG | - | chr1.3:8128079-8128098 | None:intergenic | 50.0% | |
| GCAGGAGAGTGATGTGAAGT+GGG | + | chr1.3:8127606-8127625 | MS.gene051485:intron | 50.0% | |
| GCAGTGAGGATTACTTGTGG+TGG | + | chr1.3:8128520-8128539 | MS.gene051485:CDS | 50.0% | |
| GGATGACGAAGACCAGAAAG+AGG | - | chr1.3:8128449-8128468 | None:intergenic | 50.0% | |
| GGTTGTTCCCATAAAGCGTG+TGG | + | chr1.3:8126805-8126824 | MS.gene051485:CDS | 50.0% | |
| GTGAGGATTACTTGTGGTGG+TGG | + | chr1.3:8128523-8128542 | MS.gene051485:CDS | 50.0% | |
| TCCCATAAAGCGTGTGGATC+AGG | + | chr1.3:8126811-8126830 | MS.gene051485:CDS | 50.0% | |
| TCCCCCTATCAGAACTGAGA+AGG | - | chr1.3:8128340-8128359 | None:intergenic | 50.0% | |
| TGCAGGAGAGTGATGTGAAG+TGG | + | chr1.3:8127605-8127624 | MS.gene051485:intron | 50.0% | |
| TGCCTCTACCTTCTATGTGC+AGG | + | chr1.3:8126762-8126781 | MS.gene051485:intron | 50.0% | |
| ! | CGGCCTTCTCAGTTCTGATA+GGG | + | chr1.3:8128334-8128353 | MS.gene051485:CDS | 50.0% |
| ! | GCCTTCTCAGTTCTGATAGG+GGG | + | chr1.3:8128336-8128355 | MS.gene051485:CDS | 50.0% |
| ! | GGCCTTCTCAGTTCTGATAG+GGG | + | chr1.3:8128335-8128354 | MS.gene051485:CDS | 50.0% |
| ! | TCATCTGGAGCTGTGCCATT+TGG | + | chr1.3:8128156-8128175 | MS.gene051485:CDS | 50.0% |
| !! | AATCTTGGAGAAGTGCTCCG+TGG | + | chr1.3:8126424-8126443 | MS.gene051485:CDS | 50.0% |
| !! | GGTGCCGGTTACAACAAAGA+AGG | - | chr1.3:8128685-8128704 | None:intergenic | 50.0% |
| !! | TGCCAGAATAGTGGGCTTTG+AGG | + | chr1.3:8127055-8127074 | MS.gene051485:CDS | 50.0% |
| ACTCTCCTGCAAGTAGGCAG+AGG | - | chr1.3:8127596-8127615 | None:intergenic | 55.0% | |
| GCTTGTTCAGGGATCTGCCT+TGG | - | chr1.3:8128300-8128319 | None:intergenic | 55.0% | |
| GGAACAAGACTGCAGTCCTG+AGG | - | chr1.3:8128080-8128099 | None:intergenic | 55.0% | |
| GTGCAGAAGAGCCAGATGTG+AGG | - | chr1.3:8128557-8128576 | None:intergenic | 55.0% | |
| TGGCGCTCTTACCTCACATC+TGG | + | chr1.3:8128543-8128562 | MS.gene051485:CDS | 55.0% | |
| TGTCCTCTTTCTCTCGGGCA+TGG | + | chr1.3:8127705-8127724 | MS.gene051485:CDS | 55.0% | |
| ! | CCGGCCTTCTCAGTTCTGAT+AGG | + | chr1.3:8128333-8128352 | MS.gene051485:CDS | 55.0% |
| CCACCATGCCCGAGAGAAAG+AGG | - | chr1.3:8127711-8127730 | None:intergenic | 60.0% | |
| CCTCTTTCTCTCGGGCATGG+TGG | + | chr1.3:8127708-8127727 | MS.gene051485:CDS | 60.0% | |
| GGCAGATCCCTGAACAAGCG+TGG | + | chr1.3:8128301-8128320 | MS.gene051485:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 8126301 | 8128767 | 8126301 | ID=MS.gene051485 |
| chr1.3 | mRNA | 8126301 | 8128767 | 8126301 | ID=MS.gene051485.t1;Parent=MS.gene051485 |
| chr1.3 | exon | 8126301 | 8126474 | 8126301 | ID=MS.gene051485.t1.exon1;Parent=MS.gene051485.t1 |
| chr1.3 | CDS | 8126301 | 8126474 | 8126301 | ID=cds.MS.gene051485.t1;Parent=MS.gene051485.t1 |
| chr1.3 | exon | 8126576 | 8126685 | 8126576 | ID=MS.gene051485.t1.exon2;Parent=MS.gene051485.t1 |
| chr1.3 | CDS | 8126576 | 8126685 | 8126576 | ID=cds.MS.gene051485.t1;Parent=MS.gene051485.t1 |
| chr1.3 | exon | 8126784 | 8126889 | 8126784 | ID=MS.gene051485.t1.exon3;Parent=MS.gene051485.t1 |
| chr1.3 | CDS | 8126784 | 8126889 | 8126784 | ID=cds.MS.gene051485.t1;Parent=MS.gene051485.t1 |
| chr1.3 | exon | 8126978 | 8127090 | 8126978 | ID=MS.gene051485.t1.exon4;Parent=MS.gene051485.t1 |
| chr1.3 | CDS | 8126978 | 8127090 | 8126978 | ID=cds.MS.gene051485.t1;Parent=MS.gene051485.t1 |
| chr1.3 | exon | 8127191 | 8127341 | 8127191 | ID=MS.gene051485.t1.exon5;Parent=MS.gene051485.t1 |
| chr1.3 | CDS | 8127191 | 8127341 | 8127191 | ID=cds.MS.gene051485.t1;Parent=MS.gene051485.t1 |
| chr1.3 | exon | 8127610 | 8128767 | 8127610 | ID=MS.gene051485.t1.exon6;Parent=MS.gene051485.t1 |
| chr1.3 | CDS | 8127610 | 8128767 | 8127610 | ID=cds.MS.gene051485.t1;Parent=MS.gene051485.t1 |
| Gene Sequence |
| Protein sequence |
