AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36542

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36542.t1 MTR_8g016270 99.537 648 3 0 1 648 1 648 0.0 1337
MS.gene36542.t1 MTR_1g014080 75.276 635 154 3 16 648 4 637 0.0 973
MS.gene36542.t1 MTR_3g105950 77.110 616 139 2 34 648 22 636 0.0 972
MS.gene36542.t1 MTR_5g098730 44.597 657 306 14 30 648 29 665 1.08e-178 523
MS.gene36542.t1 MTR_3g082140 43.049 669 318 14 20 648 14 659 3.31e-175 514
MS.gene36542.t1 MTR_0204s0010 48.035 458 214 7 204 648 2 448 7.26e-150 441
MS.gene36542.t1 MTR_6g074910 33.713 614 348 8 43 648 26 588 5.08e-120 369
MS.gene36542.t1 MTR_5g077170 33.115 610 355 8 45 648 29 591 2.77e-113 352
MS.gene36542.t1 MTR_8g088730 33.119 622 345 11 41 648 25 589 2.30e-96 308
MS.gene36542.t1 MTR_2g006300 32.630 616 350 10 43 648 23 583 3.56e-96 307
MS.gene36542.t1 MTR_4g053270 30.706 609 363 10 45 646 31 587 1.21e-91 296
MS.gene36542.t1 MTR_7g060560 60.169 118 46 1 102 219 273 389 1.05e-36 142
MS.gene36542.t1 MTR_3g090510 61.468 109 41 1 111 219 285 392 3.34e-35 137
MS.gene36542.t1 MTR_4g116770 41.081 185 98 4 24 206 13 188 3.20e-33 136
MS.gene36542.t1 MTR_5g014340 54.206 107 43 2 105 211 1 101 1.19e-20 92.0
MS.gene36542.t1 MTR_0249s0060 57.971 69 28 1 105 173 1 68 1.18e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36542.t1 AT3G13772 88.961 616 68 0 33 648 26 641 0.0 1162
MS.gene36542.t1 AT1G55130 83.412 639 103 2 10 648 2 637 0.0 1128
MS.gene36542.t1 AT5G25100 75.000 628 152 3 25 648 18 644 0.0 980
MS.gene36542.t1 AT2G24170 75.040 629 152 3 24 648 10 637 0.0 976
MS.gene36542.t1 AT5G10840 73.981 638 162 4 13 648 13 648 0.0 974
MS.gene36542.t1 AT5G25100 74.173 635 152 4 25 648 18 651 0.0 973
MS.gene36542.t1 AT2G24170 69.248 439 131 3 20 455 7 444 0.0 642
MS.gene36542.t1 AT5G35160 45.060 668 310 14 20 648 9 658 0.0 548
MS.gene36542.t1 AT5G35160 45.060 668 310 14 20 648 9 658 0.0 548
MS.gene36542.t1 AT5G35160 45.060 668 310 14 20 648 9 658 0.0 548
MS.gene36542.t1 AT5G35160 43.028 667 297 14 20 648 9 630 2.99e-172 505
MS.gene36542.t1 AT4G12650 43.137 663 323 13 22 648 8 652 5.86e-172 505
MS.gene36542.t1 AT2G01970 34.748 636 356 8 24 648 5 592 5.28e-126 385
MS.gene36542.t1 AT5G37310 34.477 641 350 11 23 648 8 593 4.41e-121 372
MS.gene36542.t1 AT5G37310 34.477 641 350 11 23 648 8 593 4.41e-121 372
MS.gene36542.t1 AT1G14670 34.116 639 366 8 16 648 3 592 1.24e-117 363
MS.gene36542.t1 AT1G08350 30.308 617 369 10 41 648 25 589 1.25e-103 327
MS.gene36542.t1 AT1G08350 30.308 617 369 10 41 648 25 589 1.25e-103 327
MS.gene36542.t1 AT1G10950 33.766 616 343 10 43 648 29 589 3.49e-99 315
MS.gene36542.t1 AT1G08350 30.054 559 331 8 98 648 2 508 6.98e-91 291
MS.gene36542.t1 AT1G08350 29.381 565 329 10 41 596 25 528 5.80e-87 282

Find 170 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATATGATGTTTCCTTTA+AGG 0.044878 8.2:+76849960 MS.gene36542:CDS
TGTGAACAGTGCAGAAAATT+TGG 0.158327 8.2:+76848657 MS.gene36542:CDS
TGTTGCTTGCCATAAAATTT+TGG 0.177709 8.2:+76848865 MS.gene36542:CDS
TTTAATCAGCAATACCTTAA+AGG 0.196845 8.2:-76849974 None:intergenic
GTTTCCACCCTGTTTCTTCT+TGG 0.216212 8.2:-76850261 None:intergenic
TGATTGCTCTGGTGTGTTTA+TGG 0.227225 8.2:+76850644 MS.gene36542:CDS
CATTCCACTCCTTGTATTCA+TGG 0.232106 8.2:-76849837 None:intergenic
TTGTGCTGAATGCTTTGATC+TGG 0.244839 8.2:+76850584 MS.gene36542:CDS
AACCAGTTCTACTACATCTT+TGG 0.285370 8.2:+76850880 MS.gene36542:CDS
TTCACAGGGTCTTCAATTGC+TGG 0.302354 8.2:-76850721 None:intergenic
ATACGAGCAGAACCGGTTTC+AGG 0.305775 8.2:-76849366 None:intergenic
GGTACTGGTGTTCAGATCTT+TGG 0.305940 8.2:+76850343 MS.gene36542:CDS
TTGGCTTCTATGCTTGCTTC+TGG 0.307454 8.2:+76851166 MS.gene36542:CDS
CAAAGCAAATTTGAATTGAT+TGG 0.317059 8.2:-76850310 None:intergenic
TTTCCACCCTGTTTCTTCTT+GGG 0.318919 8.2:-76850260 None:intergenic
TCCTCTGGGGCAGTTCCCTT+TGG 0.325164 8.2:+76850616 MS.gene36542:CDS
GAATTGAACATGCAGGGTTT+TGG 0.326292 8.2:+76849088 MS.gene36542:intron
TCTTTATCCTGACATCAATA+TGG 0.327876 8.2:+76850854 MS.gene36542:CDS
GTGAACAGTGCAGAAAATTT+GGG 0.330941 8.2:+76848658 MS.gene36542:CDS
TGCACTGTTCACAATCTTAG+AGG 0.332330 8.2:-76848647 None:intergenic
ATCGGTACCCTTGGTCTTTG+TGG 0.335581 8.2:+76850675 MS.gene36542:CDS
AAAACTGCGTTTATGTTTCC+GGG 0.337956 8.2:+76850541 MS.gene36542:CDS
TCTCAGGCATCCTTTACTTT+GGG 0.341278 8.2:+76851097 MS.gene36542:CDS
GTCTCAGGCATCCTTTACTT+TGG 0.348613 8.2:+76851096 MS.gene36542:CDS
GTCCATTCCTTCTACCTTCC+CGG 0.352903 8.2:+76847331 MS.gene36542:CDS
GTGTTTATGGTTCGGTATAT+CGG 0.353237 8.2:+76850657 MS.gene36542:CDS
TTCAGGAAAGTGAGATCAAA+TGG 0.354636 8.2:+76850065 MS.gene36542:intron
TGCTCGTATTGTTGGATTTG+AGG 0.356694 8.2:+76849380 MS.gene36542:CDS
TGTGTCTAGCTGGTTATAAT+TGG 0.360277 8.2:-76850227 None:intergenic
ATTGGTGGCATTCTTCCCTT+TGG 0.369375 8.2:+76850811 MS.gene36542:CDS
AGAAAATTGAGTAGAGGAAA+AGG 0.378567 8.2:-76851041 None:intergenic
CATTGAAAACTCAATATATA+CGG 0.380834 8.2:+76848702 MS.gene36542:CDS
GGTTCTTGTCTCCATCTAAT+CGG 0.384734 8.2:+76850401 MS.gene36542:CDS
TGTGCTGAATGCTTTGATCT+GGG 0.386011 8.2:+76850585 MS.gene36542:CDS
ACCGGTTCTGCTCGTATTGT+TGG 0.386145 8.2:+76849372 MS.gene36542:CDS
TTTGTTGTGACTGGAACAAT+TGG 0.391069 8.2:+76851147 MS.gene36542:CDS
GTCTTTGTGGGCAGTTACTT+AGG 0.396377 8.2:+76850688 MS.gene36542:CDS
CTTTGGAACAATGATTGCTC+TGG 0.399578 8.2:+76850633 MS.gene36542:CDS
GTCTTCTCAATTCTGATTGG+TGG 0.402285 8.2:+76850796 MS.gene36542:CDS
CCTCATCTTGTGTGTCTAGC+TGG 0.403362 8.2:-76850237 None:intergenic
TATGCCTTCTTTGTTGTGAC+TGG 0.404522 8.2:+76851138 MS.gene36542:CDS
TCGGTACCCTTGGTCTTTGT+GGG 0.405523 8.2:+76850676 MS.gene36542:CDS
TTTCTACTTCTTTACCAAGT+TGG 0.406142 8.2:+76851059 MS.gene36542:CDS
ATAAGACCTCCCCGATTAGA+TGG 0.408883 8.2:-76850412 None:intergenic
TGGAGAGCTTACCTCACTGC+TGG 0.411972 8.2:+76851003 MS.gene36542:CDS
AGCAACGCCGGGAAGGTAGA+AGG 0.413416 8.2:-76847338 None:intergenic
GATGAGGCCCAAGAAGAAAC+AGG 0.413808 8.2:+76850253 MS.gene36542:CDS
GACTGCAATGGTTCTTCTGT+GGG 0.419433 8.2:+76850435 MS.gene36542:CDS
CCTGTCTTCTCAATTCTGAT+TGG 0.421285 8.2:+76850793 MS.gene36542:CDS
GTTCTTGTCTCCATCTAATC+GGG 0.422518 8.2:+76850402 MS.gene36542:CDS
TGTAGTCTTCACTGCACAAC+TGG 0.424133 8.2:-76850972 None:intergenic
TCCAACAATACGAGCAGAAC+CGG 0.426688 8.2:-76849373 None:intergenic
AGCCAAAGATGTAGTAGAAC+TGG 0.429233 8.2:-76850882 None:intergenic
TCTCAGCACAGGTGATCAAT+AGG 0.430129 8.2:-76850927 None:intergenic
GGACGGAGGAGAAGAGGAAG+AGG 0.432621 8.2:-76847312 None:intergenic
TGTTTGTATCGACTTCTTGT+GGG 0.433694 8.2:-76849924 None:intergenic
GATCACCTGTGCTGAGATTA+CGG 0.439518 8.2:+76850933 MS.gene36542:CDS
TTCTTTCTTAGTTTCATATG+AGG 0.443024 8.2:+76848825 MS.gene36542:intron
CTCAATAAACACTGCACCAA+AGG 0.453951 8.2:-76850827 None:intergenic
CTTTGTCTAAGAACAGCAAC+TGG 0.454994 8.2:-76849119 None:intergenic
CTTTGCGTTTATGTTGGTAC+TGG 0.455076 8.2:+76850328 MS.gene36542:CDS
CGTGTTCATATGTAGTAGAT+TGG 0.459577 8.2:-76849154 None:intergenic
TTGTTTGTATCGACTTCTTG+TGG 0.464195 8.2:-76849925 None:intergenic
AGCAAATTTGAATTGATTGG+TGG 0.465043 8.2:-76850307 None:intergenic
TGCTGAATGCTTTGATCTGG+GGG 0.465420 8.2:+76850587 MS.gene36542:CDS
GAGATTACAAAGCTGGTCTC+AGG 0.477373 8.2:+76851081 MS.gene36542:CDS
GATTTGAGGTCACACCAAAC+AGG 0.478437 8.2:+76849394 MS.gene36542:CDS
GGGAAAGAACAAGACCTGTT+TGG 0.479716 8.2:-76849408 None:intergenic
TCCTAGGCAGGTACCTGAGC+AGG 0.480853 8.2:+76850756 MS.gene36542:CDS
CAATGATATTTGCTTTGCTA+GGG 0.485657 8.2:+76850380 MS.gene36542:CDS
GGTTTAGCCATATTGATGTC+AGG 0.485897 8.2:-76850861 None:intergenic
GTGCTGAATGCTTTGATCTG+GGG 0.486277 8.2:+76850586 MS.gene36542:CDS
TGAAGACTAATAAAATTCCT+AGG 0.489319 8.2:+76850740 MS.gene36542:CDS
TTTATTTGCTGGCTACTCCT+CGG 0.489528 8.2:+76850468 MS.gene36542:CDS
TATCACAAGGATCCTGAAAC+CGG 0.491760 8.2:+76849354 MS.gene36542:CDS
GTCATGTACCATGCCTGCTC+AGG 0.491798 8.2:-76850769 None:intergenic
GACTAATAAAATTCCTAGGC+AGG 0.491913 8.2:+76850744 MS.gene36542:CDS
GCTCTGGTGTGTTTATGGTT+CGG 0.492855 8.2:+76850649 MS.gene36542:CDS
CAGTTGCTGTTCTTAGACAA+AGG 0.495185 8.2:+76849120 MS.gene36542:CDS
ACAGGGTGGAAACTTGTTCA+TGG 0.497622 8.2:+76850271 MS.gene36542:CDS
GAGGAGAGTGGTGAAGAAGA+CGG 0.498009 8.2:-76847293 None:intergenic
CAAGTTGGAGATTACAAAGC+TGG 0.498464 8.2:+76851074 MS.gene36542:CDS
AGGAATGGACGGAGGAGAAG+AGG 0.502352 8.2:-76847318 None:intergenic
TCAGATGAAGGAGAAGATGA+TGG 0.504918 8.2:+76847234 None:intergenic
ACGTTTGTACAAGATGTTCA+AGG 0.505523 8.2:+76850492 MS.gene36542:CDS
CAGTATTAACCATGAATACA+AGG 0.509635 8.2:+76849828 MS.gene36542:intron
CGCCGGGAAGGTAGAAGGAA+TGG 0.511317 8.2:-76847333 None:intergenic
GGTGGTTGAACGGACGGAGA+TGG 0.512558 8.2:-76847266 None:intergenic
TGACTGCAATGGTTCTTCTG+TGG 0.515576 8.2:+76850434 MS.gene36542:CDS
GGATGATGAACACTATGAAA+AGG 0.515971 8.2:-76850906 None:intergenic
ACAATGATATTTGCTTTGCT+AGG 0.516465 8.2:+76850379 MS.gene36542:CDS
CAGCTTTGTAATCTCCAACT+TGG 0.518191 8.2:-76851073 None:intergenic
CGCGAGGAGCAACGCCGGGA+AGG 0.518393 8.2:-76847345 None:intergenic
TCAGGAAAGTGAGATCAAAT+GGG 0.521155 8.2:+76850066 MS.gene36542:intron
GAAATCGCGAGGAGCAACGC+CGG 0.524038 8.2:-76847350 None:intergenic
TCAAGGGCACAGAGTGGAAG+AGG 0.526236 8.2:+76850509 MS.gene36542:CDS
AATTTGCTTTGCGTTTATGT+TGG 0.531771 8.2:+76850322 MS.gene36542:CDS
TGCTGTTCTTAGACAAAGGA+GGG 0.532038 8.2:+76849124 MS.gene36542:CDS
TCAATAAACACTGCACCAAA+GGG 0.532050 8.2:-76850826 None:intergenic
GGTGAAGAAGACGGTGGTGG+TGG 0.533961 8.2:-76847284 None:intergenic
GGAGAAGAGGAAGAGGAGAG+TGG 0.534040 8.2:-76847305 None:intergenic
AAATCGCGAGGAGCAACGCC+GGG 0.536110 8.2:-76847349 None:intergenic
GTTCGGTATATCGGTACCCT+TGG 0.538820 8.2:+76850666 MS.gene36542:CDS
TTATTGCATGTCGTTACCTG+TGG 0.538847 8.2:-76849868 None:intergenic
TTCTTAGTTTCATATGAGGA+AGG 0.543451 8.2:+76848829 MS.gene36542:intron
GCACTGTTCACAATCTTAGA+GGG 0.547351 8.2:-76848646 None:intergenic
AGAAGTAGAAAATTGAGTAG+AGG 0.548551 8.2:-76851047 None:intergenic
AATCATCAGAGAGTTAATGA+TGG 0.549853 8.2:-76850143 None:intergenic
TTTATGGCAAGCAACAGTAC+AGG 0.552401 8.2:-76848858 None:intergenic
TTATCATATACCCAAAGTAA+AGG 0.553962 8.2:-76851107 None:intergenic
CAGAGCAATCATTGTTCCAA+AGG 0.558490 8.2:-76850632 None:intergenic
GCCTGCTCAGGTACCTGCCT+AGG 0.559404 8.2:-76850757 None:intergenic
TTCAAGTAGTAGTAGTCATA+CGG 0.560270 8.2:-76848613 None:intergenic
TGTTCCAGTCACAACAAAGA+AGG 0.561147 8.2:-76851142 None:intergenic
GTCTAAGAACAGCAACTGGA+AGG 0.564984 8.2:-76849115 None:intergenic
GGGTTCAAAGGAAACTATCA+AGG 0.567763 8.2:+76849188 MS.gene36542:CDS
TGTGCAGTGAAGACTACAAT+TGG 0.571119 8.2:+76850977 MS.gene36542:CDS
GGCAGGTACCTGAGCAGGCA+TGG 0.573677 8.2:+76850761 MS.gene36542:CDS
CCAATCAGAATTGAGAAGAC+AGG 0.574537 8.2:-76850793 None:intergenic
AGAGCAATCATTGTTCCAAA+GGG 0.575663 8.2:-76850631 None:intergenic
TGTATCGACTTCTTGTGGGA+CGG 0.578423 8.2:-76849920 None:intergenic
TGAATGATGATCAGATCCAC+TGG 0.579472 8.2:+76850116 MS.gene36542:CDS
CAGATGAAGGAGAAGATGAT+GGG 0.580777 8.2:+76847235 None:intergenic
GGAGAGCTTACCTCACTGCT+GGG 0.583273 8.2:+76851004 MS.gene36542:CDS
CGTTTGTACAAGATGTTCAA+GGG 0.585084 8.2:+76850493 MS.gene36542:CDS
ACATGACTCTAAAACTCAAG+TGG 0.591447 8.2:-76849332 None:intergenic
CACAACCGTAATCTCAGCAC+AGG 0.592033 8.2:-76850938 None:intergenic
AGACGGTGGTGGTGGTTGAA+CGG 0.593253 8.2:-76847276 None:intergenic
GGTGGTGGTGGTTGAACGGA+CGG 0.600564 8.2:-76847272 None:intergenic
AGTGGTGAAGAAGACGGTGG+TGG 0.602668 8.2:-76847287 None:intergenic
TGAACAGTGCAGAAAATTTG+GGG 0.603452 8.2:+76848659 MS.gene36542:CDS
GTGAGATCAAATGGGCATCA+CGG 0.603865 8.2:+76850074 MS.gene36542:CDS
GATCAAATGGGCATCACGGT+GGG 0.608304 8.2:+76850078 MS.gene36542:CDS
GTTCTTAGACAAAGGAGGGA+TGG 0.608774 8.2:+76849128 MS.gene36542:CDS
GAGAGTGGTGAAGAAGACGG+TGG 0.609885 8.2:-76847290 None:intergenic
AGTTAATGATGGAGAACCAG+TGG 0.613944 8.2:-76850132 None:intergenic
GTGAAGACTACAATTGGTGG+TGG 0.618344 8.2:+76850983 MS.gene36542:CDS
GTAACTGCCCACAAAGACCA+AGG 0.618820 8.2:-76850683 None:intergenic
GATACAAAGAATTTGATGCA+AGG 0.619971 8.2:+76849892 MS.gene36542:CDS
TTAACCATGAATACAAGGAG+TGG 0.620436 8.2:+76849833 MS.gene36542:CDS
GTGGAATGACAAGAATCCAC+AGG 0.621010 8.2:+76849852 MS.gene36542:CDS
GGGAGGTCTTATGACTGCAA+TGG 0.622639 8.2:+76850423 MS.gene36542:CDS
TCACAGAAGAGTAGATCTTG+CGG 0.630056 8.2:-76851194 None:intergenic
GGGTGACGCTCTCTATGTCA+AGG 0.635028 8.2:+76848558 MS.gene36542:intron
CCAGCTAGACACACAAGATG+AGG 0.635134 8.2:+76850237 MS.gene36542:CDS
TCATTGCCACCATTCCAGAA+AGG 0.638258 8.2:-76850174 None:intergenic
GGTTGAACGGACGGAGATGG+CGG 0.642205 8.2:-76847263 None:intergenic
TTGCTGTTCTTAGACAAAGG+AGG 0.643328 8.2:+76849123 MS.gene36542:CDS
CATCTTGTACAAACGTGCCG+AGG 0.645264 8.2:-76850485 None:intergenic
CAATCTACTACATATGAACA+CGG 0.645840 8.2:+76849155 MS.gene36542:CDS
TCCAAAGGGAACTGCCCCAG+AGG 0.651738 8.2:-76850617 None:intergenic
TTCTTGTCTCCATCTAATCG+GGG 0.653447 8.2:+76850403 MS.gene36542:CDS
GCTGAATGCTTTGATCTGGG+GGG 0.659660 8.2:+76850588 MS.gene36542:CDS
AGATCAAATGGGCATCACGG+TGG 0.661600 8.2:+76850077 MS.gene36542:CDS
ACAAGAAGTCGATACAAACA+AGG 0.669581 8.2:+76849927 MS.gene36542:CDS
CAATTTCATACAGAGCAAGG+AGG 0.671919 8.2:+76849290 MS.gene36542:intron
AAGGTAGAAGGAATGGACGG+AGG 0.672788 8.2:-76847326 None:intergenic
TGAGTAGAGGAAAAGGTACA+CGG 0.677707 8.2:-76851034 None:intergenic
TTGTCTCCATCTAATCGGGG+AGG 0.679868 8.2:+76850406 MS.gene36542:CDS
GCAGTGAAGACTACAATTGG+TGG 0.685384 8.2:+76850980 MS.gene36542:CDS
TAACTGCCCACAAAGACCAA+GGG 0.686563 8.2:-76850682 None:intergenic
GGTTCAAAGGAAACTATCAA+GGG 0.691117 8.2:+76849189 MS.gene36542:CDS
GGGAAGGTAGAAGGAATGGA+CGG 0.694016 8.2:-76847329 None:intergenic
AGATGTTCAAGGGCACAGAG+TGG 0.697032 8.2:+76850503 MS.gene36542:CDS
GAACAGTGCAGAAAATTTGG+GGG 0.697685 8.2:+76848660 MS.gene36542:CDS
CGTACGGTTTGGAAATCGCG+AGG 0.700988 8.2:-76847361 None:intergenic
ATGAGGCCCAAGAAGAAACA+GGG 0.714319 8.2:+76850254 MS.gene36542:CDS
GTTCAAAGGAAACTATCAAG+GGG 0.727804 8.2:+76849190 MS.gene36542:CDS
CGGCTGATGACCCAGCAGTG+AGG 0.728322 8.2:-76851014 None:intergenic
AGGCCCAAGAAGAAACAGGG+TGG 0.742731 8.2:+76850257 MS.gene36542:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTGTAAGTTATTTTTAA+TGG + chr8.2:76847865-76847884 MS.gene36542:intron 10.0%
!! AATTAAAGTTATCCAATATA+AGG - chr8.2:76848755-76848774 None:intergenic 15.0%
!!! ATTACTTTTGTGAATTTTTT+TGG + chr8.2:76849007-76849026 MS.gene36542:intron 15.0%
!! AGTGATAAATATATTGAAGT+TGG + chr8.2:76848949-76848968 MS.gene36542:intron 20.0%
!! CATTGAAAACTCAATATATA+CGG + chr8.2:76848702-76848721 MS.gene36542:CDS 20.0%
!! TAAAAGAAACATCATAATGA+AGG - chr8.2:76849589-76849608 None:intergenic 20.0%
!!! AATTGGAAATTCTAAGAATT+AGG - chr8.2:76849275-76849294 None:intergenic 20.0%
!!! ATAATATTGTGTTGTTGATT+CGG + chr8.2:76847525-76847544 MS.gene36542:intron 20.0%
!!! ATTGGAAATTCTAAGAATTA+GGG - chr8.2:76849274-76849293 None:intergenic 20.0%
!!! TAATTGAAGTAATTTGTGTT+TGG + chr8.2:76847605-76847624 MS.gene36542:intron 20.0%
!!! TCAATACTTTGTTTTATATC+TGG + chr8.2:76849491-76849510 MS.gene36542:intron 20.0%
! AAAGAACGAAAAAATCAGTT+AGG - chr8.2:76848811-76848830 None:intergenic 25.0%
! AATATAAGGCAAAATCAGTT+AGG - chr8.2:76848741-76848760 None:intergenic 25.0%
! ACAGTTACAAGTTCATATAA+AGG - chr8.2:76848419-76848438 None:intergenic 25.0%
! ATGAAGGTAAGATCTATTAA+AGG - chr8.2:76849573-76849592 None:intergenic 25.0%
! ATGTTCAATTCAAAGCTTTA+GGG - chr8.2:76849079-76849098 None:intergenic 25.0%
! CAAAGCAAATTTGAATTGAT+TGG - chr8.2:76850313-76850332 None:intergenic 25.0%
! CATCAAAATATAAGGCAAAA+TGG - chr8.2:76848784-76848803 None:intergenic 25.0%
! TAGCTCATAGTATCATATAA+TGG - chr8.2:76850029-76850048 None:intergenic 25.0%
! TGAAGACTAATAAAATTCCT+AGG + chr8.2:76850740-76850759 MS.gene36542:CDS 25.0%
! TGATTTATTAGTTCACTTGT+GGG + chr8.2:76848531-76848550 MS.gene36542:intron 25.0%
! TTATCATATACCCAAAGTAA+AGG - chr8.2:76851110-76851129 None:intergenic 25.0%
! TTCTTTCTTAGTTTCATATG+AGG + chr8.2:76848825-76848844 MS.gene36542:intron 25.0%
! TTGATTTATTAGTTCACTTG+TGG + chr8.2:76848530-76848549 MS.gene36542:intron 25.0%
! TTTAATCAGCAATACCTTAA+AGG - chr8.2:76849977-76849996 None:intergenic 25.0%
! TTTCACAGAAATGATTTCAA+TGG - chr8.2:76849714-76849733 None:intergenic 25.0%
!! AAACATAAACGCAGTTTTTA+AGG - chr8.2:76850539-76850558 None:intergenic 25.0%
!! ATTCAGCATCCAAAATTTTA+TGG - chr8.2:76848877-76848896 None:intergenic 25.0%
!! TTGGAAATTCTAAGAATTAG+GGG - chr8.2:76849273-76849292 None:intergenic 25.0%
!! TTTTCTTCCTCAAAATGAAA+AGG - chr8.2:76848368-76848387 None:intergenic 25.0%
!!! AACTTGTAACTGTTGATTTT+GGG + chr8.2:76848426-76848445 MS.gene36542:intron 25.0%
!!! ATAGTATCATATAATGGATG+AGG - chr8.2:76850023-76850042 None:intergenic 25.0%
!!! GAATTTTATTAGTCTTCACA+GGG - chr8.2:76850738-76850757 None:intergenic 25.0%
!!! TAACTGATTTTGCCTTATAT+TGG + chr8.2:76848740-76848759 MS.gene36542:intron 25.0%
AAAAACTGCGTTTATGTTTC+CGG + chr8.2:76850540-76850559 MS.gene36542:CDS 30.0%
AAAAGAATGAGAAAGATGAC+GGG - chr8.2:76849672-76849691 None:intergenic 30.0%
AAGTTCAATCATATGATGCT+TGG - chr8.2:76849468-76849487 None:intergenic 30.0%
AATCATCAGAGAGTTAATGA+TGG - chr8.2:76850146-76850165 None:intergenic 30.0%
ACAATGATATTTGCTTTGCT+AGG + chr8.2:76850379-76850398 MS.gene36542:CDS 30.0%
AGAAAATTGAGTAGAGGAAA+AGG - chr8.2:76851044-76851063 None:intergenic 30.0%
AGAAGTAGAAAATTGAGTAG+AGG - chr8.2:76851050-76851069 None:intergenic 30.0%
AGCAAATTTGAATTGATTGG+TGG - chr8.2:76850310-76850329 None:intergenic 30.0%
ATGATACTATGAGCTAAGAT+TGG + chr8.2:76850033-76850052 MS.gene36542:intron 30.0%
CAAAAGAATGAGAAAGATGA+CGG - chr8.2:76849673-76849692 None:intergenic 30.0%
CAATCTACTACATATGAACA+CGG + chr8.2:76849155-76849174 MS.gene36542:CDS 30.0%
CAATGATATTTGCTTTGCTA+GGG + chr8.2:76850380-76850399 MS.gene36542:CDS 30.0%
CACATATGATGTTTCCTTTA+AGG + chr8.2:76849960-76849979 MS.gene36542:CDS 30.0%
CAGTATTAACCATGAATACA+AGG + chr8.2:76849828-76849847 MS.gene36542:intron 30.0%
CATGTTCAATTCAAAGCTTT+AGG - chr8.2:76849080-76849099 None:intergenic 30.0%
CGGATTATTTAATCTGTGTT+TGG + chr8.2:76847545-76847564 MS.gene36542:intron 30.0%
GAAAACTCAATATATACGGT+GGG + chr8.2:76848706-76848725 MS.gene36542:intron 30.0%
GAACTTATGAGAGAAAATCA+AGG - chr8.2:76849796-76849815 None:intergenic 30.0%
GATACAAAGAATTTGATGCA+AGG + chr8.2:76849892-76849911 MS.gene36542:CDS 30.0%
GCTGATTGATAAGATATCTA+TGG - chr8.2:76849631-76849650 None:intergenic 30.0%
TAGGCTGACATCAAAATATA+AGG - chr8.2:76848792-76848811 None:intergenic 30.0%
TCTTTATCCTGACATCAATA+TGG + chr8.2:76850854-76850873 MS.gene36542:CDS 30.0%
TGAAAACTCAATATATACGG+TGG + chr8.2:76848705-76848724 MS.gene36542:intron 30.0%
TGATTGTTAGCGTAAATCTT+AGG + chr8.2:76847749-76847768 MS.gene36542:intron 30.0%
TTCAAGTAGTAGTAGTCATA+CGG - chr8.2:76848616-76848635 None:intergenic 30.0%
TTCTTAGTTTCATATGAGGA+AGG + chr8.2:76848829-76848848 MS.gene36542:intron 30.0%
TTGGAAGATGAAAGAAGAAA+TGG - chr8.2:76847391-76847410 None:intergenic 30.0%
TTTCTACTTCTTTACCAAGT+TGG + chr8.2:76851059-76851078 MS.gene36542:CDS 30.0%
TTTGAATCTTAGTGCATGTT+TGG + chr8.2:76848242-76848261 MS.gene36542:intron 30.0%
! AAAACGTGTGCTTTTGAATT+AGG - chr8.2:76848050-76848069 None:intergenic 30.0%
! AATTTGCTTTGCGTTTATGT+TGG + chr8.2:76850322-76850341 MS.gene36542:CDS 30.0%
! AGGTATTGCTGATTAAAACT+TGG + chr8.2:76849980-76849999 MS.gene36542:intron 30.0%
! ATGATTGTTCTTTTCCTTTC+TGG + chr8.2:76850160-76850179 MS.gene36542:CDS 30.0%
! GTTTTTATGGGTTTATTTGC+TGG + chr8.2:76850457-76850476 MS.gene36542:CDS 30.0%
! TGGAAATTCTAAGAATTAGG+GGG - chr8.2:76849272-76849291 None:intergenic 30.0%
! TGTTAGACCTTTTCATTTTG+AGG + chr8.2:76848358-76848377 MS.gene36542:intron 30.0%
!! TGTTGCTTGCCATAAAATTT+TGG + chr8.2:76848865-76848884 MS.gene36542:CDS 30.0%
!!! ACTTGTAACTGTTGATTTTG+GGG + chr8.2:76848427-76848446 MS.gene36542:intron 30.0%
!!! ATAGTTTTATTGCATGTGCT+TGG + chr8.2:76848502-76848521 MS.gene36542:intron 30.0%
!!! CTTTGTTTTATATCTGGAAC+TGG + chr8.2:76849497-76849516 MS.gene36542:intron 30.0%
!!! CTTTTGTGAATTTTTTTGGC+CGG + chr8.2:76849011-76849030 MS.gene36542:intron 30.0%
!!! GAACTTGTAACTGTTGATTT+TGG + chr8.2:76848425-76848444 MS.gene36542:intron 30.0%
!!! GGAATTTTATTAGTCTTCAC+AGG - chr8.2:76850739-76850758 None:intergenic 30.0%
!!! TTTTAGAGTCATGTATCACA+AGG + chr8.2:76849341-76849360 MS.gene36542:CDS 30.0%
AAAACTGCGTTTATGTTTCC+GGG + chr8.2:76850541-76850560 MS.gene36542:CDS 35.0%
AAACTCAAGCTTAGTTGTTC+TGG + chr8.2:76848136-76848155 MS.gene36542:intron 35.0%
AACCAGTTCTACTACATCTT+TGG + chr8.2:76850880-76850899 MS.gene36542:CDS 35.0%
AAGAAGAAATGGAGAACGTA+CGG - chr8.2:76847380-76847399 None:intergenic 35.0%
ACAAGAAGTCGATACAAACA+AGG + chr8.2:76849927-76849946 MS.gene36542:CDS 35.0%
ACGTTTGTACAAGATGTTCA+AGG + chr8.2:76850492-76850511 MS.gene36542:CDS 35.0%
AGAACAACTAAGCTTGAGTT+TGG - chr8.2:76848137-76848156 None:intergenic 35.0%
AGAGCAATCATTGTTCCAAA+GGG - chr8.2:76850634-76850653 None:intergenic 35.0%
ATACTATGAGCTAAGATTGG+TGG + chr8.2:76850036-76850055 MS.gene36542:intron 35.0%
CATATAGAGAAGCCATAAAC+CGG - chr8.2:76849033-76849052 None:intergenic 35.0%
CGTGTTCATATGTAGTAGAT+TGG - chr8.2:76849157-76849176 None:intergenic 35.0%
CGTTTGTACAAGATGTTCAA+GGG + chr8.2:76850493-76850512 MS.gene36542:CDS 35.0%
GACTAATAAAATTCCTAGGC+AGG + chr8.2:76850744-76850763 MS.gene36542:CDS 35.0%
GGATGATGAACACTATGAAA+AGG - chr8.2:76850909-76850928 None:intergenic 35.0%
GGTTCAAAGGAAACTATCAA+GGG + chr8.2:76849189-76849208 MS.gene36542:CDS 35.0%
GTAGGAGTGATAATTGAGTT+AGG - chr8.2:76847992-76848011 None:intergenic 35.0%
GTGAACAGTGCAGAAAATTT+GGG + chr8.2:76848658-76848677 MS.gene36542:CDS 35.0%
GTTCAAAGGAAACTATCAAG+GGG + chr8.2:76849190-76849209 MS.gene36542:CDS 35.0%
GTTTCATTACTCATCACATG+TGG - chr8.2:76848336-76848355 None:intergenic 35.0%
TATCAGTGTAGTGTTAGTGA+TGG - chr8.2:76847677-76847696 None:intergenic 35.0%
TCAATAAACACTGCACCAAA+GGG - chr8.2:76850829-76850848 None:intergenic 35.0%
TCAGGAAAGTGAGATCAAAT+GGG + chr8.2:76850066-76850085 MS.gene36542:intron 35.0%
TGAACAGTGCAGAAAATTTG+GGG + chr8.2:76848659-76848678 MS.gene36542:CDS 35.0%
TGTGAACAGTGCAGAAAATT+TGG + chr8.2:76848657-76848676 MS.gene36542:CDS 35.0%
TGTGTCTAGCTGGTTATAAT+TGG - chr8.2:76850230-76850249 None:intergenic 35.0%
TTAACCATGAATACAAGGAG+TGG + chr8.2:76849833-76849852 MS.gene36542:CDS 35.0%
TTCAGGAAAGTGAGATCAAA+TGG + chr8.2:76850065-76850084 MS.gene36542:intron 35.0%
TTCCAATTTCATACAGAGCA+AGG + chr8.2:76849287-76849306 MS.gene36542:intron 35.0%
! ACACACCTGATAAAAAGTGT+TGG + chr8.2:76847931-76847950 MS.gene36542:intron 35.0%
! GTTCTTCTGTGGGTTTTTAT+GGG + chr8.2:76850445-76850464 MS.gene36542:CDS 35.0%
! TTGTTCATGGAGATGTTTTC+AGG + chr8.2:76850284-76850303 MS.gene36542:CDS 35.0%
! TTTGTTGTGACTGGAACAAT+TGG + chr8.2:76851147-76851166 MS.gene36542:CDS 35.0%
! TTTTGCAAAAGCAGTGATTC+TGG + chr8.2:76848306-76848325 MS.gene36542:intron 35.0%
!! AAGCACCAACACTTTTTATC+AGG - chr8.2:76847939-76847958 None:intergenic 35.0%
!! AAGCTTTGAATTGAACATGC+AGG + chr8.2:76849081-76849100 MS.gene36542:intron 35.0%
!! ACATGACTCTAAAACTCAAG+TGG - chr8.2:76849335-76849354 None:intergenic 35.0%
!! AGCTTTGAATTGAACATGCA+GGG + chr8.2:76849082-76849101 MS.gene36542:intron 35.0%
!! GTGATGGATTGATTCTAAGA+CGG - chr8.2:76847661-76847680 None:intergenic 35.0%
!! GTGTTTATGGTTCGGTATAT+CGG + chr8.2:76850657-76850676 MS.gene36542:CDS 35.0%
!! TCACTGCTTTTGCAAAATCA+TGG - chr8.2:76848303-76848322 None:intergenic 35.0%
!! TGTTCTTTTCCTTTCTGGAA+TGG + chr8.2:76850165-76850184 MS.gene36542:CDS 35.0%
!! TGTTTGTATCGACTTCTTGT+GGG - chr8.2:76849927-76849946 None:intergenic 35.0%
!! TTCGTTTTTCCTTGGATCTA+GGG + chr8.2:76847424-76847443 MS.gene36542:intron 35.0%
!! TTGTTTGTATCGACTTCTTG+TGG - chr8.2:76849928-76849947 None:intergenic 35.0%
!!! AAGATTGGTGGTACTTTTTC+AGG + chr8.2:76850048-76850067 MS.gene36542:intron 35.0%
!!! CTTGTAACTGTTGATTTTGG+GGG + chr8.2:76848428-76848447 MS.gene36542:intron 35.0%
!!! GAATTTTTTTGGCCGGTTTA+TGG + chr8.2:76849018-76849037 MS.gene36542:intron 35.0%
!!! GTTCTGGTGTGGTTTTAATT+TGG + chr8.2:76848152-76848171 MS.gene36542:intron 35.0%
AACGAACATAGCGAGGAAAT+TGG - chr8.2:76847410-76847429 None:intergenic 40.0%
AAGATGCCAAAAAGAATGCC+CGG - chr8.2:76850562-76850581 None:intergenic 40.0%
AAGCTAAAACCCTAGATCCA+AGG - chr8.2:76847436-76847455 None:intergenic 40.0%
AAGGAAAAACGAACATAGCG+AGG - chr8.2:76847417-76847436 None:intergenic 40.0%
ACCTCAGTCACAATTTGAGT+AGG - chr8.2:76848010-76848029 None:intergenic 40.0%
AGAAAATCAAGGCACATACC+AGG - chr8.2:76849785-76849804 None:intergenic 40.0%
AGCCAAAGATGTAGTAGAAC+TGG - chr8.2:76850885-76850904 None:intergenic 40.0%
AGTTCAGCAGAAGGATACTT+AGG + chr8.2:76848182-76848201 MS.gene36542:intron 40.0%
CAATTTCATACAGAGCAAGG+AGG + chr8.2:76849290-76849309 MS.gene36542:intron 40.0%
CAGAGCAATCATTGTTCCAA+AGG - chr8.2:76850635-76850654 None:intergenic 40.0%
CATTCCACTCCTTGTATTCA+TGG - chr8.2:76849840-76849859 None:intergenic 40.0%
CCAATCAGAATTGAGAAGAC+AGG - chr8.2:76850796-76850815 None:intergenic 40.0%
CCTGTCTTCTCAATTCTGAT+TGG + chr8.2:76850793-76850812 MS.gene36542:CDS 40.0%
CTCAATAAACACTGCACCAA+AGG - chr8.2:76850830-76850849 None:intergenic 40.0%
CTCCTTGCTCTGTATGAAAT+TGG - chr8.2:76849292-76849311 None:intergenic 40.0%
CTTTGCGTTTATGTTGGTAC+TGG + chr8.2:76850328-76850347 MS.gene36542:CDS 40.0%
CTTTGTCTAAGAACAGCAAC+TGG - chr8.2:76849122-76849141 None:intergenic 40.0%
GAACAGTGCAGAAAATTTGG+GGG + chr8.2:76848660-76848679 MS.gene36542:CDS 40.0%
GCACTGTTCACAATCTTAGA+GGG - chr8.2:76848649-76848668 None:intergenic 40.0%
GGGTTCAAAGGAAACTATCA+AGG + chr8.2:76849188-76849207 MS.gene36542:CDS 40.0%
GGTTCTTGTCTCCATCTAAT+CGG + chr8.2:76850401-76850420 MS.gene36542:CDS 40.0%
GGTTTAGCCATATTGATGTC+AGG - chr8.2:76850864-76850883 None:intergenic 40.0%
GTAGATTTCAAATGACTGCC+TGG + chr8.2:76849764-76849783 MS.gene36542:intron 40.0%
GTCTTCTCAATTCTGATTGG+TGG + chr8.2:76850796-76850815 MS.gene36542:CDS 40.0%
GTTCTTGTCTCCATCTAATC+GGG + chr8.2:76850402-76850421 MS.gene36542:CDS 40.0%
TACTCAAATTGTGACTGAGG+TGG + chr8.2:76848009-76848028 MS.gene36542:intron 40.0%
TATCACAAGGATCCTGAAAC+CGG + chr8.2:76849354-76849373 MS.gene36542:CDS 40.0%
TCACAGAAGAGTAGATCTTG+CGG - chr8.2:76851197-76851216 None:intergenic 40.0%
TCCTACTCAAATTGTGACTG+AGG + chr8.2:76848006-76848025 MS.gene36542:intron 40.0%
TCTCAGGCATCCTTTACTTT+GGG + chr8.2:76851097-76851116 MS.gene36542:CDS 40.0%
TGAATGATGATCAGATCCAC+TGG + chr8.2:76850116-76850135 MS.gene36542:CDS 40.0%
TGATTGCTCTGGTGTGTTTA+TGG + chr8.2:76850644-76850663 MS.gene36542:CDS 40.0%
TGCACTGTTCACAATCTTAG+AGG - chr8.2:76848650-76848669 None:intergenic 40.0%
TGCTCGTATTGTTGGATTTG+AGG + chr8.2:76849380-76849399 MS.gene36542:CDS 40.0%
TGCTGTTCTTAGACAAAGGA+GGG + chr8.2:76849124-76849143 MS.gene36542:CDS 40.0%
TGTGCAGTGAAGACTACAAT+TGG + chr8.2:76850977-76850996 MS.gene36542:CDS 40.0%
TGTGCTGAATGCTTTGATCT+GGG + chr8.2:76850585-76850604 MS.gene36542:CDS 40.0%
TGTTCCAGTCACAACAAAGA+AGG - chr8.2:76851145-76851164 None:intergenic 40.0%
TTATTGCATGTCGTTACCTG+TGG - chr8.2:76849871-76849890 None:intergenic 40.0%
TTCTTGTCTCCATCTAATCG+GGG + chr8.2:76850403-76850422 MS.gene36542:CDS 40.0%
TTGTGCTGAATGCTTTGATC+TGG + chr8.2:76850584-76850603 MS.gene36542:CDS 40.0%
TTTATGGCAAGCAACAGTAC+AGG - chr8.2:76848861-76848880 None:intergenic 40.0%
! AGTTAATGATGGAGAACCAG+TGG - chr8.2:76850135-76850154 None:intergenic 40.0%
! ATATGAACACGGTTTTCGTG+TGG + chr8.2:76849166-76849185 MS.gene36542:CDS 40.0%
! ATGTTTCCGGGCATTCTTTT+TGG + chr8.2:76850553-76850572 MS.gene36542:CDS 40.0%
! CAAGTTGGAGATTACAAAGC+TGG + chr8.2:76851074-76851093 MS.gene36542:CDS 40.0%
! CAGCTTTGTAATCTCCAACT+TGG - chr8.2:76851076-76851095 None:intergenic 40.0%
! CAGTTGCTGTTCTTAGACAA+AGG + chr8.2:76849120-76849139 MS.gene36542:CDS 40.0%
! GAATTGAACATGCAGGGTTT+TGG + chr8.2:76849088-76849107 MS.gene36542:intron 40.0%
! GGAATGTTTAGTTCAGCAGA+AGG + chr8.2:76848173-76848192 MS.gene36542:intron 40.0%
! GGTTCTTCTGTGGGTTTTTA+TGG + chr8.2:76850444-76850463 MS.gene36542:CDS 40.0%
! TATGAACACGGTTTTCGTGT+GGG + chr8.2:76849167-76849186 MS.gene36542:CDS 40.0%
! TATGCCTTCTTTGTTGTGAC+TGG + chr8.2:76851138-76851157 MS.gene36542:CDS 40.0%
! TGAGGTGGCTCAATCAATTT+TGG + chr8.2:76848024-76848043 MS.gene36542:intron 40.0%
! TGAGTAGAGGAAAAGGTACA+CGG - chr8.2:76851037-76851056 None:intergenic 40.0%
! TTGCTGTTCTTAGACAAAGG+AGG + chr8.2:76849123-76849142 MS.gene36542:CDS 40.0%
! TTTATTTGCTGGCTACTCCT+CGG + chr8.2:76850468-76850487 MS.gene36542:CDS 40.0%
! TTTCCACCCTGTTTCTTCTT+GGG - chr8.2:76850263-76850282 None:intergenic 40.0%
!! CTGCTTTTGCAAAATCATGG+TGG - chr8.2:76848300-76848319 None:intergenic 40.0%
!! CTTTGGAACAATGATTGCTC+TGG + chr8.2:76850633-76850652 MS.gene36542:CDS 40.0%
!! GTTCGTTTTTCCTTGGATCT+AGG + chr8.2:76847423-76847442 MS.gene36542:intron 40.0%
!! TCGCTATGTTCGTTTTTCCT+TGG + chr8.2:76847416-76847435 MS.gene36542:intron 40.0%
!!! ACTGTTGATTTTGGGGGATT+TGG + chr8.2:76848434-76848453 MS.gene36542:intron 40.0%
!!! TCTTTTCCTTTCTGGAATGG+TGG + chr8.2:76850168-76850187 MS.gene36542:CDS 40.0%
AATGCAACACCCACACAGAT+AGG - chr8.2:76849440-76849459 None:intergenic 45.0%
ATAAGACCTCCCCGATTAGA+TGG - chr8.2:76850415-76850434 None:intergenic 45.0%
ATGAGGCCCAAGAAGAAACA+GGG + chr8.2:76850254-76850273 MS.gene36542:CDS 45.0%
ATTAGTTCACTTGTGGGACC+AGG + chr8.2:76848537-76848556 MS.gene36542:intron 45.0%
CAAGCTTAGTTGTTCTGGTG+TGG + chr8.2:76848141-76848160 MS.gene36542:intron 45.0%
CGCGAACACTTCTTTATCGA+AGG - chr8.2:76847720-76847739 None:intergenic 45.0%
GAAATGGAGAACGTACGGTT+TGG - chr8.2:76847375-76847394 None:intergenic 45.0%
GACTGCAATGGTTCTTCTGT+GGG + chr8.2:76850435-76850454 MS.gene36542:CDS 45.0%
GATCACCTGTGCTGAGATTA+CGG + chr8.2:76850933-76850952 MS.gene36542:CDS 45.0%
GCAGTGAAGACTACAATTGG+TGG + chr8.2:76850980-76850999 MS.gene36542:CDS 45.0%
GCTCTGGTGTGTTTATGGTT+CGG + chr8.2:76850649-76850668 MS.gene36542:CDS 45.0%
GGGAAAGAACAAGACCTGTT+TGG - chr8.2:76849411-76849430 None:intergenic 45.0%
GTCTAAGAACAGCAACTGGA+AGG - chr8.2:76849118-76849137 None:intergenic 45.0%
GTCTCAGGCATCCTTTACTT+TGG + chr8.2:76851096-76851115 MS.gene36542:CDS 45.0%
GTCTTTGTGGGCAGTTACTT+AGG + chr8.2:76850688-76850707 MS.gene36542:CDS 45.0%
GTGAAGACTACAATTGGTGG+TGG + chr8.2:76850983-76851002 MS.gene36542:CDS 45.0%
GTGAGATCAAATGGGCATCA+CGG + chr8.2:76850074-76850093 MS.gene36542:CDS 45.0%
GTGCTGAATGCTTTGATCTG+GGG + chr8.2:76850586-76850605 MS.gene36542:CDS 45.0%
GTGGAATGACAAGAATCCAC+AGG + chr8.2:76849852-76849871 MS.gene36542:CDS 45.0%
GTTCTTAGACAAAGGAGGGA+TGG + chr8.2:76849128-76849147 MS.gene36542:CDS 45.0%
TAACTGCCCACAAAGACCAA+GGG - chr8.2:76850685-76850704 None:intergenic 45.0%
TCATTGCCACCATTCCAGAA+AGG - chr8.2:76850177-76850196 None:intergenic 45.0%
TCCAACAATACGAGCAGAAC+CGG - chr8.2:76849376-76849395 None:intergenic 45.0%
TCTCAGCACAGGTGATCAAT+AGG - chr8.2:76850930-76850949 None:intergenic 45.0%
TGACTGCAATGGTTCTTCTG+TGG + chr8.2:76850434-76850453 MS.gene36542:CDS 45.0%
TGCTGAATGCTTTGATCTGG+GGG + chr8.2:76850587-76850606 MS.gene36542:CDS 45.0%
TGGAATGTAATCACGCGTGT+CGG + chr8.2:76847885-76847904 MS.gene36542:intron 45.0%
TGTAGTCTTCACTGCACAAC+TGG - chr8.2:76850975-76850994 None:intergenic 45.0%
TTAGTTCACTTGTGGGACCA+GGG + chr8.2:76848538-76848557 MS.gene36542:intron 45.0%
TTCACAGGGTCTTCAATTGC+TGG - chr8.2:76850724-76850743 None:intergenic 45.0%
TTGGCTTCTATGCTTGCTTC+TGG + chr8.2:76851166-76851185 MS.gene36542:CDS 45.0%
! ACAGGGTGGAAACTTGTTCA+TGG + chr8.2:76850271-76850290 MS.gene36542:CDS 45.0%
! ATGAACACGGTTTTCGTGTG+GGG + chr8.2:76849168-76849187 MS.gene36542:CDS 45.0%
! ATTGGTGGCATTCTTCCCTT+TGG + chr8.2:76850811-76850830 MS.gene36542:CDS 45.0%
! GAAGCACCAACACTTCTGAT+CGG - chr8.2:76847827-76847846 None:intergenic 45.0%
! GAGATTACAAAGCTGGTCTC+AGG + chr8.2:76851081-76851100 MS.gene36542:CDS 45.0%
! GATTTGAGGTCACACCAAAC+AGG + chr8.2:76849394-76849413 MS.gene36542:CDS 45.0%
! GTTTCCACCCTGTTTCTTCT+TGG - chr8.2:76850264-76850283 None:intergenic 45.0%
! TTCTTTATCGAAGGCGTGTC+CGG - chr8.2:76847711-76847730 None:intergenic 45.0%
!! GGTACTGGTGTTCAGATCTT+TGG + chr8.2:76850343-76850362 MS.gene36542:CDS 45.0%
!! TGTATCGACTTCTTGTGGGA+CGG - chr8.2:76849923-76849942 None:intergenic 45.0%
AAGGTAGAAGGAATGGACGG+AGG - chr8.2:76847329-76847348 None:intergenic 50.0%
AATTTGGGGGAGGTTCTTCG+AGG + chr8.2:76848673-76848692 MS.gene36542:CDS 50.0%
ACACTTCTGATCGGACGTGA+TGG - chr8.2:76847818-76847837 None:intergenic 50.0%
AGATCAAATGGGCATCACGG+TGG + chr8.2:76850077-76850096 MS.gene36542:CDS 50.0%
ATGGTGGCTCACTGGTATTC+TGG - chr8.2:76848284-76848303 None:intergenic 50.0%
CACAACCGTAATCTCAGCAC+AGG - chr8.2:76850941-76850960 None:intergenic 50.0%
CACTGATACGTGTCACACAC+CGG + chr8.2:76847689-76847708 MS.gene36542:intron 50.0%
CAGTGCAGAAAATTTGGGGG+AGG + chr8.2:76848663-76848682 MS.gene36542:CDS 50.0%
CATCTTGTACAAACGTGCCG+AGG - chr8.2:76850488-76850507 None:intergenic 50.0%
CCAGCTAGACACACAAGATG+AGG + chr8.2:76850237-76850256 MS.gene36542:CDS 50.0%
CCTCATCTTGTGTGTCTAGC+TGG - chr8.2:76850240-76850259 None:intergenic 50.0%
GAGGAGAGTGGTGAAGAAGA+CGG - chr8.2:76847296-76847315 None:intergenic 50.0%
GATCAAATGGGCATCACGGT+GGG + chr8.2:76850078-76850097 MS.gene36542:CDS 50.0%
GATGAGGCCCAAGAAGAAAC+AGG + chr8.2:76850253-76850272 MS.gene36542:CDS 50.0%
GCAAAATCATGGTGGCTCAC+TGG - chr8.2:76848292-76848311 None:intergenic 50.0%
GCTGAATGCTTTGATCTGGG+GGG + chr8.2:76850588-76850607 MS.gene36542:CDS 50.0%
GGGAAGGTAGAAGGAATGGA+CGG - chr8.2:76847332-76847351 None:intergenic 50.0%
GTAACTGCCCACAAAGACCA+AGG - chr8.2:76850686-76850705 None:intergenic 50.0%
GTCCATTCCTTCTACCTTCC+CGG + chr8.2:76847331-76847350 MS.gene36542:CDS 50.0%
GTTCGGTATATCGGTACCCT+TGG + chr8.2:76850666-76850685 MS.gene36542:CDS 50.0%
TTGTCTCCATCTAATCGGGG+AGG + chr8.2:76850406-76850425 MS.gene36542:CDS 50.0%
! ACCGGTTCTGCTCGTATTGT+TGG + chr8.2:76849372-76849391 MS.gene36542:CDS 50.0%
! AGATGTTCAAGGGCACAGAG+TGG + chr8.2:76850503-76850522 MS.gene36542:CDS 50.0%
! ATACGAGCAGAACCGGTTTC+AGG - chr8.2:76849369-76849388 None:intergenic 50.0%
! ATCGGTACCCTTGGTCTTTG+TGG + chr8.2:76850675-76850694 MS.gene36542:CDS 50.0%
! GGGAGGTCTTATGACTGCAA+TGG + chr8.2:76850423-76850442 MS.gene36542:CDS 50.0%
! GGTTTTCGTGTGGGGTTCAA+AGG + chr8.2:76849176-76849195 MS.gene36542:CDS 50.0%
! TCACGTCCGATCAGAAGTGT+TGG + chr8.2:76847818-76847837 MS.gene36542:intron 50.0%
! TCGGTACCCTTGGTCTTTGT+GGG + chr8.2:76850676-76850695 MS.gene36542:CDS 50.0%
!! TGAGAAAGATGACGGGTCAC+AGG - chr8.2:76849665-76849684 None:intergenic 50.0%
ACACCCACACAGATAGGTGG+AGG - chr8.2:76849434-76849453 None:intergenic 55.0%
ACCCACACAGATAGGTGGAG+GGG - chr8.2:76849432-76849451 None:intergenic 55.0%
AGGAATGGACGGAGGAGAAG+AGG - chr8.2:76847321-76847340 None:intergenic 55.0%
AGGCCCAAGAAGAAACAGGG+TGG + chr8.2:76850257-76850276 MS.gene36542:CDS 55.0%
AGGTGTGTGTCCACGTGTCA+GGG - chr8.2:76847919-76847938 None:intergenic 55.0%
AGTGGTGAAGAAGACGGTGG+TGG - chr8.2:76847290-76847309 None:intergenic 55.0%
CACCCACACAGATAGGTGGA+GGG - chr8.2:76849433-76849452 None:intergenic 55.0%
GAGAGTGGTGAAGAAGACGG+TGG - chr8.2:76847293-76847312 None:intergenic 55.0%
GCAACACCCACACAGATAGG+TGG - chr8.2:76849437-76849456 None:intergenic 55.0%
GGAGAAGAGGAAGAGGAGAG+TGG - chr8.2:76847308-76847327 None:intergenic 55.0%
GGAGAGCTTACCTCACTGCT+GGG + chr8.2:76851004-76851023 MS.gene36542:CDS 55.0%
GGGTGACGCTCTCTATGTCA+AGG + chr8.2:76848558-76848577 MS.gene36542:intron 55.0%
GTCATGTACCATGCCTGCTC+AGG - chr8.2:76850772-76850791 None:intergenic 55.0%
TGGAGAGCTTACCTCACTGC+TGG + chr8.2:76851003-76851022 MS.gene36542:CDS 55.0%
! CGTACGGTTTGGAAATCGCG+AGG - chr8.2:76847364-76847383 None:intergenic 55.0%
! TCAAGGGCACAGAGTGGAAG+AGG + chr8.2:76850509-76850528 MS.gene36542:CDS 55.0%
!! AGACGGTGGTGGTGGTTGAA+CGG - chr8.2:76847279-76847298 None:intergenic 55.0%
!! TGACATAGAGAGCGTCACCC+TGG - chr8.2:76848558-76848577 None:intergenic 55.0%
AAATCGCGAGGAGCAACGCC+GGG - chr8.2:76847352-76847371 None:intergenic 60.0%
AGCAACGCCGGGAAGGTAGA+AGG - chr8.2:76847341-76847360 None:intergenic 60.0%
CAGGTGTGTGTCCACGTGTC+AGG - chr8.2:76847920-76847939 None:intergenic 60.0%
CCCACACAGATAGGTGGAGG+GGG - chr8.2:76849431-76849450 None:intergenic 60.0%
CCCCCTCCACCTATCTGTGT+GGG + chr8.2:76849428-76849447 MS.gene36542:intron 60.0%
CGCCGGGAAGGTAGAAGGAA+TGG - chr8.2:76847336-76847355 None:intergenic 60.0%
GAAATCGCGAGGAGCAACGC+CGG - chr8.2:76847353-76847372 None:intergenic 60.0%
GGACGGAGGAGAAGAGGAAG+AGG - chr8.2:76847315-76847334 None:intergenic 60.0%
GGTGGTTGAACGGACGGAGA+TGG - chr8.2:76847269-76847288 None:intergenic 60.0%
GGTTGAACGGACGGAGATGG+CGG - chr8.2:76847266-76847285 None:intergenic 60.0%
TCCAAAGGGAACTGCCCCAG+AGG - chr8.2:76850620-76850639 None:intergenic 60.0%
TCCCCCTCCACCTATCTGTG+TGG + chr8.2:76849427-76849446 MS.gene36542:intron 60.0%
TCCTAGGCAGGTACCTGAGC+AGG + chr8.2:76850756-76850775 MS.gene36542:CDS 60.0%
! GGTGAAGAAGACGGTGGTGG+TGG - chr8.2:76847287-76847306 None:intergenic 60.0%
! GGTGTTGTGACCCTGACACG+TGG + chr8.2:76847906-76847925 MS.gene36542:intron 60.0%
!! GGTGGTGGTGGTTGAACGGA+CGG - chr8.2:76847275-76847294 None:intergenic 60.0%
!! TCCTCTGGGGCAGTTCCCTT+TGG + chr8.2:76850616-76850635 MS.gene36542:CDS 60.0%
ATCTGGGGGGAGCAGTCCTC+TGG + chr8.2:76850601-76850620 MS.gene36542:CDS 65.0%
CGGCTGATGACCCAGCAGTG+AGG - chr8.2:76851017-76851036 None:intergenic 65.0%
GCCTGCTCAGGTACCTGCCT+AGG - chr8.2:76850760-76850779 None:intergenic 65.0%
GGCAGGTACCTGAGCAGGCA+TGG + chr8.2:76850761-76850780 MS.gene36542:CDS 65.0%
TCTGGGGGGAGCAGTCCTCT+GGG + chr8.2:76850602-76850621 MS.gene36542:CDS 65.0%
CTGGGGGGAGCAGTCCTCTG+GGG + chr8.2:76850603-76850622 MS.gene36542:CDS 70.0%
CGCGAGGAGCAACGCCGGGA+AGG - chr8.2:76847348-76847367 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 76847238 76851227 76847238 ID=MS.gene36542
chr8.2 mRNA 76847238 76851227 76847238 ID=MS.gene36542.t1;Parent=MS.gene36542
chr8.2 exon 76847238 76847378 76847238 ID=MS.gene36542.t1.exon1;Parent=MS.gene36542.t1
chr8.2 CDS 76847238 76847378 76847238 ID=cds.MS.gene36542.t1;Parent=MS.gene36542.t1
chr8.2 exon 76848559 76848723 76848559 ID=MS.gene36542.t1.exon2;Parent=MS.gene36542.t1
chr8.2 CDS 76848559 76848723 76848559 ID=cds.MS.gene36542.t1;Parent=MS.gene36542.t1
chr8.2 exon 76848836 76848945 76848836 ID=MS.gene36542.t1.exon3;Parent=MS.gene36542.t1
chr8.2 CDS 76848836 76848945 76848836 ID=cds.MS.gene36542.t1;Parent=MS.gene36542.t1
chr8.2 exon 76849103 76849211 76849103 ID=MS.gene36542.t1.exon4;Parent=MS.gene36542.t1
chr8.2 CDS 76849103 76849211 76849103 ID=cds.MS.gene36542.t1;Parent=MS.gene36542.t1
chr8.2 exon 76849303 76849415 76849303 ID=MS.gene36542.t1.exon5;Parent=MS.gene36542.t1
chr8.2 CDS 76849303 76849415 76849303 ID=cds.MS.gene36542.t1;Parent=MS.gene36542.t1
chr8.2 exon 76849831 76849981 76849831 ID=MS.gene36542.t1.exon6;Parent=MS.gene36542.t1
chr8.2 CDS 76849831 76849981 76849831 ID=cds.MS.gene36542.t1;Parent=MS.gene36542.t1
chr8.2 exon 76850070 76851227 76850070 ID=MS.gene36542.t1.exon7;Parent=MS.gene36542.t1
chr8.2 CDS 76850070 76851227 76850070 ID=cds.MS.gene36542.t1;Parent=MS.gene36542.t1
Gene Sequence

>MS.gene36542

ATGAAGGAGAAGATGATGGGATGCACCGCCATCTCCGTCCGTTCAACCACCACCACCGTCTTCTTCACCACTCTCCTCTTCCTCTTCTCCTCCGTCCATTCCTTCTACCTTCCCGGCGTTGCTCCTCGCGATTTCCAAACCGTACGTTCTCCATTTCTTCTTTCATCTTCCAATTTCCTCGCTATGTTCGTTTTTCCTTGGATCTAGGGTTTTAGCTTTGATCTACGTTGAATCACGCTCTTTCTTTTTTTATTCATACTCGATTTTGTGTTTATTGAAGTACTTGAATAATATTGTGTTGTTGATTCGGATTATTTAATCTGTGTTTGGTTTGAATTGAATACGATAGATTTTGTGTGATTTATCTTAATTGAAGTAATTTGTGTTTGGATGCTTTTTTTGTCACTCTCAAAGCTTATACCGTCTTAGAATCAATCCATCACTAACACTACACTGATACGTGTCACACACCGGACACGCCTTCGATAAAGAAGTGTTCGCGCTTCAGAGCTGATTGTTAGCGTAAATCTTAGGTCATTTTTAATTGAATGTAATCACATGTGTCTGTGTTGTGACACCATCACGTCCGATCAGAAGTGTTGGTGCTTCAAAGATTATCGTTAGTGTAAATTGTAAGTTATTTTTAATGGAATGTAATCACGCGTGTCGGTGTTGTGACCCTGACACGTGGACACACACCTGATAAAAAGTGTTGGTGCTTCAAAGCTTATTGCTAGTGTAAATTGTTTAACCTAACTCAATTATCACTCCTACTCAAATTGTGACTGAGGTGGCTCAATCAATTTTGGCCTAATTCAAAAGCACACGTTTTTGTCATGTCATGAAATCGTGTTTGATTGAAGACAAATTCAATTATGATACAATGCAACATTTAACCAAACTCAAGCTTAGTTGTTCTGGTGTGGTTTTAATTTGGAATGTTTAGTTCAGCAGAAGGATACTTAGGAGCTCTTCATTTTAAGTATCAAGCACTTCAATTGCTGTTTGAATCTTAGTGCATGTTTGGCAGCACAGTGAGTTTGCCAGAATACCAGTGAGCCACCATGATTTTGCAAAAGCAGTGATTCTGGCAAACCACATGTGATGAGTAATGAAACTGTGTTAGACCTTTTCATTTTGAGGAAGAAAAAAGAAGAAAAGAAAACATAGTGTGTGTACCTTTATATGAACTTGTAACTGTTGATTTTGGGGGATTTGGTTAAGATAGAGAACATTTTAGTTCAATTTGTTTTTTGTTTAGTTTATAGTTTTATTGCATGTGCTTGGAGATATTGATTTATTAGTTCACTTGTGGGACCAGGGTGACGCTCTCTATGTCAAGGTGAACAAATTGTCGTCTACAAAGACTCAGCTTCCGTATGACTACTACTACTTGAAGTATTGCAAACCCTCTAAGATTGTGAACAGTGCAGAAAATTTGGGGGAGGTTCTTCGAGGTGATCGCATTGAAAACTCAATATATACGGTGGGCATCTGTTACCTAACTGATTTTGCCTTATATTGGATAACTTTAATTCAGAGACCATTTTGCCTTATATTTTGATGTCAGCCTAACTGATTTTTTCGTTCTTTCTTAGTTTCATATGAGGAAGGAACAGTCCTGTACTGTTGCTTGCCATAAAATTTTGGATGCTGAATCTGCAAAGAATTTTAAAGAAAAAATTGATGATGAATATCGAGTGAACATGTAAGTGATAAATATATTGAAGTTGGTGCTTAGTTATGTAGTATGAGCTTGAGTTCATTAAATTACTTTTGTGAATTTTTTTGGCCGGTTTATGGCTTCTCTATATGTTTCTGATTTATATTCTCTTGAGCCCTAAAGCTTTGAATTGAACATGCAGGGTTTTGGATAACCTTCCAGTTGCTGTTCTTAGACAAAGGAGGGATGGCAGCCAATCTACTACATATGAACACGGTTTTCGTGTGGGGTTCAAAGGAAACTATCAAGGGGTATAACTCGCTAACTCAGCATTTATTTCTATTATAGAATTTAAATATCATTTTAGTCCCCCTAATTCTTAGAATTTCCAATTTCATACAGAGCAAGGAGGAGAAATATTTTATCAATAACCACTTGAGTTTTAGAGTCATGTATCACAAGGATCCTGAAACCGGTTCTGCTCGTATTGTTGGATTTGAGGTCACACCAAACAGGTCTTGTTCTTTCCCCCTCCACCTATCTGTGTGGGTGTTGCATTATTAACCAAGCATCATATGATTGAACTTTTTTCAATACTTTGTTTTATATCTGGAACTGGAATAAGATGTTGTTCAGAATAACGCAAATGAAACAGATTATATGAGAAGTCCTTTAATAGATCTTACCTTCATTATGATGTTTCTTTTATTTGAAGATAAAAAACTTGCCATAGATATCTTATCAATCAGCTATTAGTTACTCCTGTGACCCGTCATCTTTCTCATTCTTTTGCACTTGTGCTTATCACATCCATTGAAATCATTTCTGTGAAATAAAGACAATGTATGTTTGATTGCTTTCTAGTAGATTTCAAATGACTGCCTGGTATGTGCCTTGATTTTCTCTCATAAGTTCTATAACTGTGAACAGTATTAACCATGAATACAAGGAGTGGAATGACAAGAATCCACAGGTAACGACATGCAATAAAGATACAAAGAATTTGATGCAAGGTAGTACCGTCCCACAAGAAGTCGATACAAACAAGGATATAGTATTCACATATGATGTTTCCTTTAAGGTATTGCTGATTAAAACTTGGCTACTCATGAATTTTCACCTCATCCATTATATGATACTATGAGCTAAGATTGGTGGTACTTTTTCAGGAAAGTGAGATCAAATGGGCATCACGGTGGGACACATATCTTCTAATGAATGATGATCAGATCCACTGGTTCTCCATCATTAACTCTCTGATGATTGTTCTTTTCCTTTCTGGAATGGTGGCAATGATCATGATGAGAACTCTTTACAGAGACATTGCCAATTATAACCAGCTAGACACACAAGATGAGGCCCAAGAAGAAACAGGGTGGAAACTTGTTCATGGAGATGTTTTCAGGCCACCAATCAATTCAAATTTGCTTTGCGTTTATGTTGGTACTGGTGTTCAGATCTTTGGAATGACACTTGTGACAATGATATTTGCTTTGCTAGGGTTCTTGTCTCCATCTAATCGGGGAGGTCTTATGACTGCAATGGTTCTTCTGTGGGTTTTTATGGGTTTATTTGCTGGCTACTCCTCGGCACGTTTGTACAAGATGTTCAAGGGCACAGAGTGGAAGAGGAATACCTTAAAAACTGCGTTTATGTTTCCGGGCATTCTTTTTGGCATCTTCTTTGTGCTGAATGCTTTGATCTGGGGGGAGCAGTCCTCTGGGGCAGTTCCCTTTGGAACAATGATTGCTCTGGTGTGTTTATGGTTCGGTATATCGGTACCCTTGGTCTTTGTGGGCAGTTACTTAGGTTTTAAAAAGCCAGCAATTGAAGACCCTGTGAAGACTAATAAAATTCCTAGGCAGGTACCTGAGCAGGCATGGTACATGACACCTGTCTTCTCAATTCTGATTGGTGGCATTCTTCCCTTTGGTGCAGTGTTTATTGAGCTCTTCTTTATCCTGACATCAATATGGCTAAACCAGTTCTACTACATCTTTGGCTTCCTTTTCATAGTGTTCATCATCCTATTGATCACCTGTGCTGAGATTACGGTTGTGCTTTGCTACTTCCAGTTGTGCAGTGAAGACTACAATTGGTGGTGGAGAGCTTACCTCACTGCTGGGTCATCAGCCGTGTACCTTTTCCTCTACTCAATTTTCTACTTCTTTACCAAGTTGGAGATTACAAAGCTGGTCTCAGGCATCCTTTACTTTGGGTATATGATAATTGTTTCATATGCCTTCTTTGTTGTGACTGGAACAATTGGCTTCTATGCTTGCTTCTGGTTTGTCCGCAAGATCTACTCTTCTGTGAAAATTGATTGA
Protein sequence

>MS.gene36542.t1

MKEKMMGCTAISVRSTTTTVFFTTLLFLFSSVHSFYLPGVAPRDFQTGDALYVKVNKLSSTKTQLPYDYYYLKYCKPSKIVNSAENLGEVLRGDRIENSIYTFHMRKEQSCTVACHKILDAESAKNFKEKIDDEYRVNMVLDNLPVAVLRQRRDGSQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHKDPETGSARIVGFEVTPNSINHEYKEWNDKNPQVTTCNKDTKNLMQGSTVPQEVDTNKDIVFTYDVSFKESEIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFLSGMVAMIMMRTLYRDIANYNQLDTQDEAQEETGWKLVHGDVFRPPINSNLLCVYVGTGVQIFGMTLVTMIFALLGFLSPSNRGGLMTAMVLLWVFMGLFAGYSSARLYKMFKGTEWKRNTLKTAFMFPGILFGIFFVLNALIWGEQSSGAVPFGTMIALVCLWFGISVPLVFVGSYLGFKKPAIEDPVKTNKIPRQVPEQAWYMTPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFIILLITCAEITVVLCYFQLCSEDYNWWWRAYLTAGSSAVYLFLYSIFYFFTKLEITKLVSGILYFGYMIIVSYAFFVVTGTIGFYACFWFVRKIYSSVKID