Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33117.t1 | XP_003588860.1 | 98.8 | 602 | 6 | 1 | 3 | 603 | 36 | 637 | 0.00E+00 | 1180.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33117.t1 | F4KIB2 | 85.7 | 603 | 84 | 1 | 3 | 603 | 46 | 648 | 4.9e-305 | 1047.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33117.t1 | G7I879 | 98.8 | 602 | 6 | 1 | 3 | 603 | 36 | 637 | 0.0e+00 | 1180.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058486 | MS.gene33117 | 0.970663 | 5.83E-132 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33117 | MS.gene57710 | PPI |
| MS.gene36542 | MS.gene33117 | PPI |
| MS.gene33117 | MS.gene016086 | PPI |
| MS.gene014910 | MS.gene33117 | PPI |
| MS.gene33117 | MS.gene36990 | PPI |
| MS.gene33117 | MS.gene42664 | PPI |
| MS.gene33117 | MS.gene58761 | PPI |
| MS.gene33117 | MS.gene80181 | PPI |
| MS.gene33117 | MS.gene36992 | PPI |
| MS.gene80184 | MS.gene33117 | PPI |
| MS.gene32702 | MS.gene33117 | PPI |
| MS.gene33117 | MS.gene020254 | PPI |
| MS.gene33117 | MS.gene051485 | PPI |
| MS.gene33117 | MS.gene058486 | PPI |
| MS.gene33117 | MS.gene036639 | PPI |
| MS.gene33117 | MS.gene041418 | PPI |
| MS.gene33117 | MS.gene011190 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33117.t1 | MTR_1g014080 | 98.837 | 602 | 6 | 1 | 3 | 603 | 36 | 637 | 0.0 | 1226 |
| MS.gene33117.t1 | MTR_3g105950 | 91.196 | 602 | 52 | 1 | 3 | 603 | 35 | 636 | 0.0 | 1122 |
| MS.gene33117.t1 | MTR_8g016270 | 76.373 | 601 | 141 | 1 | 4 | 603 | 48 | 648 | 0.0 | 968 |
| MS.gene33117.t1 | MTR_5g098730 | 45.696 | 639 | 290 | 14 | 3 | 603 | 46 | 665 | 5.88e-180 | 525 |
| MS.gene33117.t1 | MTR_3g082140 | 44.866 | 633 | 304 | 12 | 3 | 603 | 40 | 659 | 4.87e-178 | 519 |
| MS.gene33117.t1 | MTR_0204s0010 | 47.598 | 458 | 216 | 7 | 159 | 603 | 2 | 448 | 1.56e-148 | 436 |
| MS.gene33117.t1 | MTR_5g077170 | 32.949 | 607 | 355 | 8 | 3 | 603 | 31 | 591 | 2.61e-114 | 353 |
| MS.gene33117.t1 | MTR_6g074910 | 32.125 | 607 | 358 | 8 | 3 | 603 | 30 | 588 | 2.77e-111 | 345 |
| MS.gene33117.t1 | MTR_8g088730 | 33.279 | 613 | 343 | 9 | 3 | 603 | 31 | 589 | 6.60e-104 | 326 |
| MS.gene33117.t1 | MTR_2g006300 | 33.826 | 609 | 339 | 9 | 5 | 603 | 29 | 583 | 1.04e-101 | 320 |
| MS.gene33117.t1 | MTR_4g053270 | 30.298 | 604 | 365 | 9 | 4 | 601 | 34 | 587 | 8.49e-91 | 292 |
| MS.gene33117.t1 | MTR_7g060560 | 94.068 | 118 | 7 | 0 | 59 | 176 | 274 | 391 | 2.08e-71 | 235 |
| MS.gene33117.t1 | MTR_3g090510 | 93.750 | 112 | 7 | 0 | 65 | 176 | 283 | 394 | 4.12e-68 | 226 |
| MS.gene33117.t1 | MTR_5g014340 | 86.916 | 107 | 9 | 1 | 61 | 167 | 1 | 102 | 5.20e-49 | 171 |
| MS.gene33117.t1 | MTR_0249s0060 | 89.706 | 68 | 7 | 0 | 61 | 128 | 1 | 68 | 3.94e-30 | 113 |
| MS.gene33117.t1 | MTR_4g116770 | 42.857 | 161 | 80 | 5 | 4 | 161 | 37 | 188 | 4.19e-29 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33117.t1 | AT5G10840 | 85.738 | 603 | 84 | 1 | 3 | 603 | 46 | 648 | 0.0 | 1064 |
| MS.gene33117.t1 | AT5G25100 | 84.768 | 604 | 88 | 1 | 4 | 603 | 48 | 651 | 0.0 | 1056 |
| MS.gene33117.t1 | AT5G25100 | 84.628 | 605 | 89 | 1 | 3 | 603 | 40 | 644 | 0.0 | 1056 |
| MS.gene33117.t1 | AT2G24170 | 82.196 | 601 | 106 | 1 | 4 | 603 | 37 | 637 | 0.0 | 1030 |
| MS.gene33117.t1 | AT3G13772 | 76.451 | 603 | 139 | 3 | 3 | 603 | 40 | 641 | 0.0 | 968 |
| MS.gene33117.t1 | AT1G55130 | 74.627 | 603 | 150 | 3 | 3 | 603 | 36 | 637 | 0.0 | 946 |
| MS.gene33117.t1 | AT2G24170 | 78.155 | 412 | 89 | 1 | 4 | 414 | 37 | 448 | 0.0 | 689 |
| MS.gene33117.t1 | AT5G35160 | 45.016 | 642 | 291 | 13 | 4 | 603 | 37 | 658 | 0.0 | 530 |
| MS.gene33117.t1 | AT5G35160 | 45.016 | 642 | 291 | 13 | 4 | 603 | 37 | 658 | 0.0 | 530 |
| MS.gene33117.t1 | AT5G35160 | 45.016 | 642 | 291 | 13 | 4 | 603 | 37 | 658 | 0.0 | 530 |
| MS.gene33117.t1 | AT4G12650 | 45.110 | 634 | 301 | 13 | 3 | 603 | 33 | 652 | 3.22e-173 | 507 |
| MS.gene33117.t1 | AT5G35160 | 44.262 | 610 | 279 | 12 | 35 | 603 | 41 | 630 | 1.89e-166 | 489 |
| MS.gene33117.t1 | AT2G01970 | 33.717 | 608 | 348 | 8 | 3 | 603 | 33 | 592 | 1.06e-121 | 372 |
| MS.gene33117.t1 | AT1G14670 | 33.882 | 608 | 347 | 8 | 3 | 603 | 33 | 592 | 2.55e-114 | 353 |
| MS.gene33117.t1 | AT5G37310 | 32.566 | 608 | 353 | 7 | 4 | 603 | 35 | 593 | 3.56e-111 | 345 |
| MS.gene33117.t1 | AT5G37310 | 32.566 | 608 | 353 | 7 | 4 | 603 | 35 | 593 | 3.56e-111 | 345 |
| MS.gene33117.t1 | AT1G10950 | 34.328 | 603 | 332 | 9 | 11 | 603 | 41 | 589 | 3.61e-103 | 324 |
| MS.gene33117.t1 | AT1G08350 | 31.466 | 607 | 360 | 11 | 4 | 603 | 32 | 589 | 2.36e-100 | 317 |
| MS.gene33117.t1 | AT1G08350 | 31.466 | 607 | 360 | 11 | 4 | 603 | 32 | 589 | 2.36e-100 | 317 |
| MS.gene33117.t1 | AT1G08350 | 30.755 | 556 | 330 | 10 | 54 | 603 | 2 | 508 | 6.77e-87 | 280 |
| MS.gene33117.t1 | AT1G08350 | 30.811 | 555 | 319 | 11 | 4 | 551 | 32 | 528 | 4.67e-86 | 278 |
Find 132 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTTTGGCTTCCTCTTTC+TGG | 0.064189 | 1.1:+7506600 | MS.gene33117:CDS |
| ATCCTGATCCACACGCTTTA+TGG | 0.119105 | 1.1:-7504979 | None:intergenic |
| TCTCTTCTTGTGCTTCTTCT+TGG | 0.188485 | 1.1:-7505955 | None:intergenic |
| TTCATGTACCACGCTTGTTC+AGG | 0.250510 | 1.1:-7506475 | None:intergenic |
| TTGTATTGAATGGTCTGATA+TGG | 0.253856 | 1.1:+7506290 | MS.gene33117:CDS |
| CAATTGAGAACCAGTGAATT+TGG | 0.264042 | 1.1:-7505832 | None:intergenic |
| CTCTTCTTGTGCTTCTTCTT+GGG | 0.281012 | 1.1:-7505954 | None:intergenic |
| ACCATTCAATACAAAGAAAA+TGG | 0.292510 | 1.1:-7506281 | None:intergenic |
| GCTTTGAGGTTAAGCCATTC+AGG | 0.304144 | 1.1:+7505235 | MS.gene33117:CDS |
| AACCTCAAAGCCCACTATTC+TGG | 0.312174 | 1.1:-7505223 | None:intergenic |
| AACATGAATATGAAGGGAAA+TGG | 0.333966 | 1.1:+7505362 | MS.gene33117:CDS |
| TTGGTGGCTATGTTGGATTC+AGG | 0.340881 | 1.1:+7506401 | MS.gene33117:CDS |
| TCTTCATTCTCACCTCAATC+TGG | 0.353616 | 1.1:+7506560 | MS.gene33117:CDS |
| CACATATGATGTTGAATTCC+TGG | 0.357055 | 1.1:+7505486 | MS.gene33117:CDS |
| CTTGTTCAGGGATCTGCCTT+GGG | 0.361865 | 1.1:-7506462 | None:intergenic |
| TTCAACTTCTTGAGGAGTAT+TGG | 0.372089 | 1.1:-7505443 | None:intergenic |
| CACACAACATTGCACATTTG+TGG | 0.372808 | 1.1:-7504757 | None:intergenic |
| ACAATGCTCTTTGCTGTCCT+TGG | 0.391461 | 1.1:+7506085 | MS.gene33117:CDS |
| TATGCCTTCTTTGTTGTAAC+CGG | 0.395161 | 1.1:+7506844 | MS.gene33117:CDS |
| TCATCTGGAGCTGTGCCATT+TGG | 0.398656 | 1.1:+7506322 | MS.gene33117:CDS |
| GATGATTGTCCTCTTTCTCT+CGG | 0.399152 | 1.1:+7505865 | MS.gene33117:CDS |
| GATTCTAGATAACCTTCCTT+TGG | 0.407859 | 1.1:+7504950 | MS.gene33117:CDS |
| TCCCATAAAGCGTGTGGATC+AGG | 0.408601 | 1.1:+7504977 | MS.gene33117:CDS |
| CACTGAATCTGCCAGAATAG+TGG | 0.409116 | 1.1:+7505212 | MS.gene33117:CDS |
| TCCTGATCCACACGCTTTAT+GGG | 0.409906 | 1.1:-7504978 | None:intergenic |
| TTGTGTGTTTATGTTGGTAC+TGG | 0.410260 | 1.1:+7506034 | MS.gene33117:CDS |
| CCGGCCTTCTCAGTTCTGAT+AGG | 0.413755 | 1.1:+7506499 | MS.gene33117:CDS |
| CAACTTCGTGATTTCAAGCT+TGG | 0.416283 | 1.1:-7506779 | None:intergenic |
| TATTGAAAATTCACGTTATG+TGG | 0.420978 | 1.1:+7504619 | MS.gene33117:CDS |
| GATTCTACTGTTTATCAGCT+TGG | 0.421408 | 1.1:+7504999 | MS.gene33117:CDS |
| AGTAATCCTCACTGCACAAC+TGG | 0.425366 | 1.1:-7506678 | None:intergenic |
| ACATGAATATGAAGGGAAAT+GGG | 0.426030 | 1.1:+7505363 | MS.gene33117:CDS |
| ATTAGCCCACCTCTGTTTGA+AGG | 0.427160 | 1.1:-7506118 | None:intergenic |
| GCTTGTTCAGGGATCTGCCT+TGG | 0.428645 | 1.1:-7506463 | None:intergenic |
| TGCCAGAATAGTGGGCTTTG+AGG | 0.438212 | 1.1:+7505221 | MS.gene33117:CDS |
| CACAACAGATCTGAGTTGTT+TGG | 0.439121 | 1.1:-7506016 | None:intergenic |
| TTGGATAGTGCTGAAAATCT+TGG | 0.448087 | 1.1:+7504575 | MS.gene33117:CDS |
| TGTATTGAATGGTCTGATAT+GGG | 0.449462 | 1.1:+7506291 | MS.gene33117:CDS |
| TTTGTTGTAACCGGCACCAT+TGG | 0.456580 | 1.1:+7506853 | MS.gene33117:CDS |
| GGAAGTGAATAATATGTGTA+TGG | 0.459005 | 1.1:-7504530 | None:intergenic |
| ATATGGGGACAAAAGTCATC+TGG | 0.459129 | 1.1:+7506307 | MS.gene33117:CDS |
| TATCAGCTTGGTTTCCATGT+TGG | 0.460613 | 1.1:+7505011 | MS.gene33117:CDS |
| CGGCCTTCTCAGTTCTGATA+GGG | 0.462225 | 1.1:+7506500 | MS.gene33117:CDS |
| GTCATCATTCATCAGCAGAT+AGG | 0.462860 | 1.1:-7505810 | None:intergenic |
| TGTCCTCTTTCTCTCGGGCA+TGG | 0.464468 | 1.1:+7505871 | MS.gene33117:CDS |
| ATGATTGTCCTCTTTCTCTC+GGG | 0.466449 | 1.1:+7505866 | MS.gene33117:CDS |
| AATAATATGTGTATGGAAGC+TGG | 0.475548 | 1.1:-7504523 | None:intergenic |
| TGGCGCTCTTACCTCACATC+TGG | 0.475574 | 1.1:+7506709 | MS.gene33117:CDS |
| TTTCCCTCTTCAACTTCTTG+AGG | 0.477051 | 1.1:-7505451 | None:intergenic |
| ATTCCAATATTACATGGTGC+AGG | 0.478776 | 1.1:+7504454 | None:intergenic |
| TCAATGAAAACAGCTCCAAA+TGG | 0.478934 | 1.1:-7506532 | None:intergenic |
| GAAGATTGATGATGAGTATC+GGG | 0.480629 | 1.1:+7504822 | MS.gene33117:CDS |
| GACAGCTATGCTCTTGCTAT+GGG | 0.482841 | 1.1:+7506141 | MS.gene33117:CDS |
| AAAATGGCAGAGACAGAGGC+AGG | 0.487505 | 1.1:-7506265 | None:intergenic |
| GGTTTCCATGTTGGACTCAA+AGG | 0.490497 | 1.1:+7505020 | MS.gene33117:CDS |
| TGACAGCTATGCTCTTGCTA+TGG | 0.490539 | 1.1:+7506140 | MS.gene33117:CDS |
| TCATGTACCACGCTTGTTCA+GGG | 0.491346 | 1.1:-7506474 | None:intergenic |
| AGAATGTTGCATAAAGAAAG+AGG | 0.493377 | 1.1:-7506747 | None:intergenic |
| CCACCATGCCCGAGAGAAAG+AGG | 0.498120 | 1.1:-7505874 | None:intergenic |
| CTTTCTCCTTCAAACAGAGG+TGG | 0.502130 | 1.1:+7506112 | MS.gene33117:CDS |
| GATCTGTTGTGTGTTTATGT+TGG | 0.504784 | 1.1:+7506028 | MS.gene33117:CDS |
| CACCTCTGTTTGAAGGAGAA+AGG | 0.505594 | 1.1:-7506111 | None:intergenic |
| GACAACTGTATGTTTAGCAT+GGG | 0.507896 | 1.1:-7505416 | None:intergenic |
| GGACTCAAAGGACAATATAG+TGG | 0.508903 | 1.1:+7505032 | MS.gene33117:CDS |
| CAATGAAAACAGCTCCAAAT+GGG | 0.511643 | 1.1:-7506531 | None:intergenic |
| AGTGTTAAACATGAATATGA+AGG | 0.511795 | 1.1:+7505355 | MS.gene33117:intron |
| AGAAGATTGATGATGAGTAT+CGG | 0.514607 | 1.1:+7504821 | MS.gene33117:CDS |
| CGCTTTATGGGAACAACCAA+AGG | 0.515207 | 1.1:-7504966 | None:intergenic |
| AGAGCAAACATTGTTCCAAA+TGG | 0.527819 | 1.1:-7506337 | None:intergenic |
| CCTATCAGAACTGAGAAGGC+CGG | 0.533053 | 1.1:-7506499 | None:intergenic |
| TTTCTCCTTCAAACAGAGGT+GGG | 0.533866 | 1.1:+7506113 | MS.gene33117:CDS |
| CTATCAGAACTGAGAAGGCC+GGG | 0.534233 | 1.1:-7506498 | None:intergenic |
| GACTCAAAGGACAATATAGT+GGG | 0.535283 | 1.1:+7505033 | MS.gene33117:CDS |
| AAGCACAAGAAGAGACTGGT+TGG | 0.539709 | 1.1:+7505963 | MS.gene33117:CDS |
| TGCGTAAAATCCAATGGTGC+CGG | 0.543229 | 1.1:-7506863 | None:intergenic |
| TCAAGAAGTTGAAGAGGGAA+AGG | 0.543806 | 1.1:+7505453 | MS.gene33117:CDS |
| GTATCTGCAATATTATACTT+CGG | 0.545739 | 1.1:+7506802 | MS.gene33117:CDS |
| CACAGACATGCAGACCTGAA+TGG | 0.550784 | 1.1:-7505249 | None:intergenic |
| TGACAACTGTATGTTTAGCA+TGG | 0.550993 | 1.1:-7505417 | None:intergenic |
| ACTGAATCTGCCAGAATAGT+GGG | 0.555697 | 1.1:+7505213 | MS.gene33117:CDS |
| ATTTGACAGTAAATGCCAAA+TGG | 0.557238 | 1.1:-7505173 | None:intergenic |
| GGTTGTTCCCATAAAGCGTG+TGG | 0.557317 | 1.1:+7504971 | MS.gene33117:CDS |
| CATTGTACTTTGAAATATCA+CGG | 0.557682 | 1.1:-7505922 | None:intergenic |
| AACAGATCTGAGTTGTTTGG+TGG | 0.557705 | 1.1:-7506013 | None:intergenic |
| GGATGACGAAGACCAGAAAG+AGG | 0.558905 | 1.1:-7506612 | None:intergenic |
| CGCTTATACAAAATGTTCAA+AGG | 0.560242 | 1.1:+7506199 | MS.gene33117:CDS |
| ATGTGAAGTGGGCTTCAAGA+TGG | 0.563049 | 1.1:+7505783 | MS.gene33117:CDS |
| GAAGAAGCACAAGAAGAGAC+TGG | 0.567424 | 1.1:+7505959 | MS.gene33117:CDS |
| AAACTGATTCAACCAGATTG+AGG | 0.568595 | 1.1:-7506572 | None:intergenic |
| TTCCTTTCTCCTTCAAACAG+AGG | 0.571385 | 1.1:+7506109 | MS.gene33117:CDS |
| TACTCCTCAAGAAGTTGAAG+AGG | 0.574236 | 1.1:+7505447 | MS.gene33117:CDS |
| CAAGCTTGAAATCACGAAGT+TGG | 0.580482 | 1.1:+7506780 | MS.gene33117:CDS |
| GTGAGGATTACTTGTGGTGG+TGG | 0.581791 | 1.1:+7506689 | MS.gene33117:CDS |
| AGTGGAAGAAAATTTCCCTC+AGG | 0.592786 | 1.1:+7506227 | MS.gene33117:CDS |
| GAACAAGACTGCAGTCCTGA+GGG | 0.595951 | 1.1:-7506242 | None:intergenic |
| ATAATATGTGTATGGAAGCT+GGG | 0.597147 | 1.1:-7504522 | None:intergenic |
| AAAGAAAATGGCAGAGACAG+AGG | 0.604759 | 1.1:-7506269 | None:intergenic |
| ACAACTGTATGTTTAGCATG+GGG | 0.606268 | 1.1:-7505415 | None:intergenic |
| TTCCAATATTACATGGTGCA+GGG | 0.609018 | 1.1:+7504455 | None:intergenic |
| TGTGAAGTGGGCTTCAAGAT+GGG | 0.611136 | 1.1:+7505784 | MS.gene33117:CDS |
| GCCTTCTCAGTTCTGATAGG+GGG | 0.611204 | 1.1:+7506502 | MS.gene33117:CDS |
| GTGTTAAACATGAATATGAA+GGG | 0.614070 | 1.1:+7505356 | MS.gene33117:intron |
| GGCCTTCTCAGTTCTGATAG+GGG | 0.615040 | 1.1:+7506501 | MS.gene33117:CDS |
| CTACTTCCAGTTGTGCAGTG+AGG | 0.617050 | 1.1:+7506672 | MS.gene33117:CDS |
| TTGAAGGAGAAAGGAATCCA+AGG | 0.617531 | 1.1:-7506102 | None:intergenic |
| GGTGCCGGTTACAACAAAGA+AGG | 0.620039 | 1.1:-7506848 | None:intergenic |
| TTATGGGAACAACCAAAGGA+AGG | 0.622552 | 1.1:-7504962 | None:intergenic |
| ATTGTCCTTTGAGTCCAACA+TGG | 0.625666 | 1.1:-7505025 | None:intergenic |
| ACTCCTCAAGAAGTTGAAGA+GGG | 0.626156 | 1.1:+7505448 | MS.gene33117:CDS |
| TGCAGGAGAGTGATGTGAAG+TGG | 0.630793 | 1.1:+7505771 | MS.gene33117:intron |
| TGAATGATGACCAAATTCAC+TGG | 0.630891 | 1.1:+7505822 | MS.gene33117:CDS |
| AAAGCATGCGTAAAATCCAA+TGG | 0.631715 | 1.1:-7506869 | None:intergenic |
| GGAACAAGACTGCAGTCCTG+AGG | 0.632360 | 1.1:-7506243 | None:intergenic |
| CCTCTTTCTCTCGGGCATGG+TGG | 0.636806 | 1.1:+7505874 | MS.gene33117:CDS |
| TGAAAACAAACAAAATCCCA+AGG | 0.637171 | 1.1:+7506446 | MS.gene33117:CDS |
| GTATTGAATGGTCTGATATG+GGG | 0.638197 | 1.1:+7506292 | MS.gene33117:CDS |
| GGCAGATCCCTGAACAAGCG+TGG | 0.641948 | 1.1:+7506467 | MS.gene33117:CDS |
| GCAGGAGAGTGATGTGAAGT+GGG | 0.642804 | 1.1:+7505772 | MS.gene33117:intron |
| ACTGGTTGGAAGCTTGTCCA+TGG | 0.644200 | 1.1:+7505977 | MS.gene33117:CDS |
| ACAAGCGTGGTACATGAACC+CGG | 0.649898 | 1.1:+7506480 | MS.gene33117:CDS |
| GCAGTGAGGATTACTTGTGG+TGG | 0.656188 | 1.1:+7506686 | MS.gene33117:CDS |
| AAATGGCAGAGACAGAGGCA+GGG | 0.659868 | 1.1:-7506264 | None:intergenic |
| GTGCAGAAGAGCCAGATGTG+AGG | 0.677656 | 1.1:-7506720 | None:intergenic |
| AAATGTTCAAAGGATCAGAG+TGG | 0.690463 | 1.1:+7506209 | MS.gene33117:CDS |
| TGTGCAGTGAGGATTACTTG+TGG | 0.692738 | 1.1:+7506683 | MS.gene33117:CDS |
| CAACTGTATGTTTAGCATGG+GGG | 0.696889 | 1.1:-7505414 | None:intergenic |
| TTTCTGCACAAGTGATAACG+AGG | 0.700675 | 1.1:-7506633 | None:intergenic |
| TTGAAATACACAGAGCAAGG+AGG | 0.723557 | 1.1:+7505131 | MS.gene33117:intron |
| TGTGTGTAAGCTTAAAGTTG+AGG | 0.748545 | 1.1:+7504774 | MS.gene33117:CDS |
| ACTCAAAGGACAATATAGTG+GGG | 0.752368 | 1.1:+7505034 | MS.gene33117:CDS |
| CTGGAAGTAGCAAAGCACGA+CGG | 0.762251 | 1.1:-7506659 | None:intergenic |
| AATCTTGGAGAAGTGCTCCG+TGG | 0.794103 | 1.1:+7504590 | MS.gene33117:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATAACAATAACAAT+TGG | - | chr1.1:7505699-7505718 | None:intergenic | 10.0% |
| !!! | TATTCTTCTCTAATTATTTT+TGG | + | chr1.1:7505637-7505656 | MS.gene33117:intron | 15.0% |
| ! | AAACCATATATTTAACCACT+TGG | - | chr1.1:7505579-7505598 | None:intergenic | 25.0% |
| ! | AAGTGGTTAAATATATGGTT+TGG | + | chr1.1:7505578-7505597 | MS.gene33117:intron | 25.0% |
| ! | ACCATTCAATACAAAGAAAA+TGG | - | chr1.1:7506284-7506303 | None:intergenic | 25.0% |
| ! | AGTGGTTAAATATATGGTTT+GGG | + | chr1.1:7505579-7505598 | MS.gene33117:intron | 25.0% |
| ! | AGTGTTAAACATGAATATGA+AGG | + | chr1.1:7505355-7505374 | MS.gene33117:intron | 25.0% |
| ! | CACAAGAAGAAGAAAAAATT+TGG | - | chr1.1:7505102-7505121 | None:intergenic | 25.0% |
| ! | GGAAATATAAGACAATTTAC+TGG | - | chr1.1:7504865-7504884 | None:intergenic | 25.0% |
| ! | GTATCTGCAATATTATACTT+CGG | + | chr1.1:7506802-7506821 | MS.gene33117:CDS | 25.0% |
| ! | GTGTTAAACATGAATATGAA+GGG | + | chr1.1:7505356-7505375 | MS.gene33117:intron | 25.0% |
| ! | TAAATTGTCTTATATTTCCG+TGG | + | chr1.1:7504866-7504885 | MS.gene33117:intron | 25.0% |
| ! | TATTGAAAATTCACGTTATG+TGG | + | chr1.1:7504619-7504638 | MS.gene33117:CDS | 25.0% |
| !! | AATCAGTTTTACTACATCTT+TGG | + | chr1.1:7506586-7506605 | MS.gene33117:CDS | 25.0% |
| !! | CTTTGAACATTTTGTATAAG+CGG | - | chr1.1:7506201-7506220 | None:intergenic | 25.0% |
| !! | TTTGAACATTTTGTATAAGC+GGG | - | chr1.1:7506200-7506219 | None:intergenic | 25.0% |
| !!! | ATTTTAGTGAAAGATGATGA+TGG | + | chr1.1:7505714-7505733 | MS.gene33117:intron | 25.0% |
| !!! | CATTGTACTTTGAAATATCA+CGG | - | chr1.1:7505925-7505944 | None:intergenic | 25.0% |
| !!! | GTTTTTTATACACAACCATT+TGG | + | chr1.1:7505158-7505177 | MS.gene33117:CDS | 25.0% |
| !!! | TATGCATTCTTACTGATTTT+CGG | + | chr1.1:7505314-7505333 | MS.gene33117:intron | 25.0% |
| AACATGAATATGAAGGGAAA+TGG | + | chr1.1:7505362-7505381 | MS.gene33117:CDS | 30.0% | |
| AATAATATGTGTATGGAAGC+TGG | - | chr1.1:7504526-7504545 | None:intergenic | 30.0% | |
| ACATGAATATGAAGGGAAAT+GGG | + | chr1.1:7505363-7505382 | MS.gene33117:CDS | 30.0% | |
| AGAATGTTGCATAAAGAAAG+AGG | - | chr1.1:7506750-7506769 | None:intergenic | 30.0% | |
| ATAATATGTGTATGGAAGCT+GGG | - | chr1.1:7504525-7504544 | None:intergenic | 30.0% | |
| ATGCCAAGTGGTTAAATATA+TGG | + | chr1.1:7505573-7505592 | MS.gene33117:intron | 30.0% | |
| ATTTGACAGTAAATGCCAAA+TGG | - | chr1.1:7505176-7505195 | None:intergenic | 30.0% | |
| CGCTTATACAAAATGTTCAA+AGG | + | chr1.1:7506199-7506218 | MS.gene33117:CDS | 30.0% | |
| GACATGTTATTGTTAACACT+TGG | + | chr1.1:7504654-7504673 | MS.gene33117:intron | 30.0% | |
| GATCTTCAATATCAAGATAG+TGG | - | chr1.1:7504902-7504921 | None:intergenic | 30.0% | |
| GGAAGTGAATAATATGTGTA+TGG | - | chr1.1:7504533-7504552 | None:intergenic | 30.0% | |
| TACTACGTTTGAATACCTAT+TGG | + | chr1.1:7505543-7505562 | MS.gene33117:intron | 30.0% | |
| TGAAAACAAACAAAATCCCA+AGG | + | chr1.1:7506446-7506465 | MS.gene33117:CDS | 30.0% | |
| TGTATTGAATGGTCTGATAT+GGG | + | chr1.1:7506291-7506310 | MS.gene33117:CDS | 30.0% | |
| TTGTATTGAATGGTCTGATA+TGG | + | chr1.1:7506290-7506309 | MS.gene33117:CDS | 30.0% | |
| TTTATTAAGATGATCTCACC+AGG | - | chr1.1:7505507-7505526 | None:intergenic | 30.0% | |
| ! | AATTTTCAATACGATCACCA+CGG | - | chr1.1:7504610-7504629 | None:intergenic | 30.0% |
| ! | TGTTTGCTCTGATCTTTTTA+TGG | + | chr1.1:7506350-7506369 | MS.gene33117:CDS | 30.0% |
| ! | TTTGAATGCTTTTGCAGTTT+TGG | - | chr1.1:7504800-7504819 | None:intergenic | 30.0% |
| !! | AGAAGATTGATGATGAGTAT+CGG | + | chr1.1:7504821-7504840 | MS.gene33117:CDS | 30.0% |
| !! | GCCATTTTCTTTGTATTGAA+TGG | + | chr1.1:7506280-7506299 | MS.gene33117:CDS | 30.0% |
| !!! | ACTATCCAAGATTTTTTCTG+GGG | - | chr1.1:7504564-7504583 | None:intergenic | 30.0% |
| !!! | CACTATCCAAGATTTTTTCT+GGG | - | chr1.1:7504565-7504584 | None:intergenic | 30.0% |
| AAAGCATGCGTAAAATCCAA+TGG | - | chr1.1:7506872-7506891 | None:intergenic | 35.0% | |
| AAATGTTCAAAGGATCAGAG+TGG | + | chr1.1:7506209-7506228 | MS.gene33117:CDS | 35.0% | |
| ACAACTGTATGTTTAGCATG+GGG | - | chr1.1:7505418-7505437 | None:intergenic | 35.0% | |
| ACTCAAAGGACAATATAGTG+GGG | + | chr1.1:7505034-7505053 | MS.gene33117:CDS | 35.0% | |
| AGAGCAAACATTGTTCCAAA+TGG | - | chr1.1:7506340-7506359 | None:intergenic | 35.0% | |
| ATGTTGAAATACACAGAGCA+AGG | + | chr1.1:7505128-7505147 | MS.gene33117:intron | 35.0% | |
| CAATGAAAACAGCTCCAAAT+GGG | - | chr1.1:7506534-7506553 | None:intergenic | 35.0% | |
| CAATTGAGAACCAGTGAATT+TGG | - | chr1.1:7505835-7505854 | None:intergenic | 35.0% | |
| CACATATGATGTTGAATTCC+TGG | + | chr1.1:7505486-7505505 | MS.gene33117:CDS | 35.0% | |
| GACAACTGTATGTTTAGCAT+GGG | - | chr1.1:7505419-7505438 | None:intergenic | 35.0% | |
| GACTCAAAGGACAATATAGT+GGG | + | chr1.1:7505033-7505052 | MS.gene33117:CDS | 35.0% | |
| GATCTGTTGTGTGTTTATGT+TGG | + | chr1.1:7506028-7506047 | MS.gene33117:CDS | 35.0% | |
| GATTCTACTGTTTATCAGCT+TGG | + | chr1.1:7504999-7505018 | MS.gene33117:CDS | 35.0% | |
| GATTCTAGATAACCTTCCTT+TGG | + | chr1.1:7504950-7504969 | MS.gene33117:CDS | 35.0% | |
| GTATTGAATGGTCTGATATG+GGG | + | chr1.1:7506292-7506311 | MS.gene33117:CDS | 35.0% | |
| TCAATGAAAACAGCTCCAAA+TGG | - | chr1.1:7506535-7506554 | None:intergenic | 35.0% | |
| TGAATGATGACCAAATTCAC+TGG | + | chr1.1:7505822-7505841 | MS.gene33117:CDS | 35.0% | |
| TGACAACTGTATGTTTAGCA+TGG | - | chr1.1:7505420-7505439 | None:intergenic | 35.0% | |
| TGTGTGTAAGCTTAAAGTTG+AGG | + | chr1.1:7504774-7504793 | MS.gene33117:CDS | 35.0% | |
| TGTTATTGTTAACACTTGGC+TGG | + | chr1.1:7504658-7504677 | MS.gene33117:intron | 35.0% | |
| TTGTGTGTTTATGTTGGTAC+TGG | + | chr1.1:7506034-7506053 | MS.gene33117:CDS | 35.0% | |
| ! | AAACTGATTCAACCAGATTG+AGG | - | chr1.1:7506575-7506594 | None:intergenic | 35.0% |
| ! | GCTCTGATCTTTTTATGGTT+TGG | + | chr1.1:7506355-7506374 | MS.gene33117:CDS | 35.0% |
| ! | GGTTAAATATATGGTTTGGG+CGG | + | chr1.1:7505582-7505601 | MS.gene33117:intron | 35.0% |
| ! | TATGCCTTCTTTGTTGTAAC+CGG | + | chr1.1:7506844-7506863 | MS.gene33117:CDS | 35.0% |
| ! | TTCAACTTCTTGAGGAGTAT+TGG | - | chr1.1:7505446-7505465 | None:intergenic | 35.0% |
| ! | TTCACAGGATTTTCAATTGC+AGG | - | chr1.1:7506430-7506449 | None:intergenic | 35.0% |
| ! | TTGGATAGTGCTGAAAATCT+TGG | + | chr1.1:7504575-7504594 | MS.gene33117:CDS | 35.0% |
| ! | TTGGATTTTACGCATGCTTT+TGG | + | chr1.1:7506872-7506891 | MS.gene33117:CDS | 35.0% |
| !! | GAAGATTGATGATGAGTATC+GGG | + | chr1.1:7504822-7504841 | MS.gene33117:CDS | 35.0% |
| !! | GGGATTTTGTTTGTTTTCAC+AGG | - | chr1.1:7506445-7506464 | None:intergenic | 35.0% |
| !! | TTGTCCATGGTGATGTTTTT+AGG | + | chr1.1:7505990-7506009 | MS.gene33117:CDS | 35.0% |
| !!! | ATTTTTTCTGGGGGACAATA+AGG | - | chr1.1:7504554-7504573 | None:intergenic | 35.0% |
| !!! | CTATCCAAGATTTTTTCTGG+GGG | - | chr1.1:7504563-7504582 | None:intergenic | 35.0% |
| !!! | GCACTATCCAAGATTTTTTC+TGG | - | chr1.1:7504566-7504585 | None:intergenic | 35.0% |
| !!! | GTACTGGTGTTCAGTTTTTT+GGG | + | chr1.1:7506050-7506069 | MS.gene33117:CDS | 35.0% |
| !!! | TCAGTTCCACTTGTTTTTGT+TGG | + | chr1.1:7506382-7506401 | MS.gene33117:CDS | 35.0% |
| AAAGAAAATGGCAGAGACAG+AGG | - | chr1.1:7506272-7506291 | None:intergenic | 40.0% | |
| AACAGATCTGAGTTGTTTGG+TGG | - | chr1.1:7506016-7506035 | None:intergenic | 40.0% | |
| ACTCCTCAAGAAGTTGAAGA+GGG | + | chr1.1:7505448-7505467 | MS.gene33117:CDS | 40.0% | |
| ACTGAATCTGCCAGAATAGT+GGG | + | chr1.1:7505213-7505232 | MS.gene33117:CDS | 40.0% | |
| AGTGGAAGAAAATTTCCCTC+AGG | + | chr1.1:7506227-7506246 | MS.gene33117:CDS | 40.0% | |
| ATAGTGGCAGAAAATAGCCA+CGG | - | chr1.1:7504886-7504905 | None:intergenic | 40.0% | |
| ATATGGGGACAAAAGTCATC+TGG | + | chr1.1:7506307-7506326 | MS.gene33117:CDS | 40.0% | |
| ATGATTGTCCTCTTTCTCTC+GGG | + | chr1.1:7505866-7505885 | MS.gene33117:CDS | 40.0% | |
| ATTGTCCTTTGAGTCCAACA+TGG | - | chr1.1:7505028-7505047 | None:intergenic | 40.0% | |
| CAACTGTATGTTTAGCATGG+GGG | - | chr1.1:7505417-7505436 | None:intergenic | 40.0% | |
| CAACTTCGTGATTTCAAGCT+TGG | - | chr1.1:7506782-7506801 | None:intergenic | 40.0% | |
| CAAGCTTGAAATCACGAAGT+TGG | + | chr1.1:7506780-7506799 | MS.gene33117:CDS | 40.0% | |
| CACAACAGATCTGAGTTGTT+TGG | - | chr1.1:7506019-7506038 | None:intergenic | 40.0% | |
| CACACAACATTGCACATTTG+TGG | - | chr1.1:7504760-7504779 | None:intergenic | 40.0% | |
| CTCTTCTTGTGCTTCTTCTT+GGG | - | chr1.1:7505957-7505976 | None:intergenic | 40.0% | |
| GATAATTGTGTTGTGGTCAG+TGG | + | chr1.1:7504680-7504699 | MS.gene33117:intron | 40.0% | |
| GATGATTGTCCTCTTTCTCT+CGG | + | chr1.1:7505865-7505884 | MS.gene33117:CDS | 40.0% | |
| GGACTCAAAGGACAATATAG+TGG | + | chr1.1:7505032-7505051 | MS.gene33117:CDS | 40.0% | |
| GTAAGAATGCATACCACAAC+TGG | - | chr1.1:7505307-7505326 | None:intergenic | 40.0% | |
| GTCATCATTCATCAGCAGAT+AGG | - | chr1.1:7505813-7505832 | None:intergenic | 40.0% | |
| TACTCCTCAAGAAGTTGAAG+AGG | + | chr1.1:7505447-7505466 | MS.gene33117:CDS | 40.0% | |
| TAGCCACCAACAAAAACAAG+TGG | - | chr1.1:7506391-7506410 | None:intergenic | 40.0% | |
| TATCAGCTTGGTTTCCATGT+TGG | + | chr1.1:7505011-7505030 | MS.gene33117:CDS | 40.0% | |
| TCAAGAAGTTGAAGAGGGAA+AGG | + | chr1.1:7505453-7505472 | MS.gene33117:CDS | 40.0% | |
| TCTCTTCTTGTGCTTCTTCT+TGG | - | chr1.1:7505958-7505977 | None:intergenic | 40.0% | |
| TCTTCATTCTCACCTCAATC+TGG | + | chr1.1:7506560-7506579 | MS.gene33117:CDS | 40.0% | |
| TTATGGGAACAACCAAAGGA+AGG | - | chr1.1:7504965-7504984 | None:intergenic | 40.0% | |
| TTCCTTTCTCCTTCAAACAG+AGG | + | chr1.1:7506109-7506128 | MS.gene33117:CDS | 40.0% | |
| TTGAAATACACAGAGCAAGG+AGG | + | chr1.1:7505131-7505150 | MS.gene33117:intron | 40.0% | |
| TTGAAGGAGAAAGGAATCCA+AGG | - | chr1.1:7506105-7506124 | None:intergenic | 40.0% | |
| TTGGCTGGATAATTGTGTTG+TGG | + | chr1.1:7504673-7504692 | MS.gene33117:intron | 40.0% | |
| TTGTCCCCCAGAAAAAATCT+TGG | + | chr1.1:7504556-7504575 | MS.gene33117:CDS | 40.0% | |
| TTTCCCTCTTCAACTTCTTG+AGG | - | chr1.1:7505454-7505473 | None:intergenic | 40.0% | |
| TTTCTCCTTCAAACAGAGGT+GGG | + | chr1.1:7506113-7506132 | MS.gene33117:CDS | 40.0% | |
| ! | GTTTTCATGGGGATTTTTGC+TGG | + | chr1.1:7506163-7506182 | MS.gene33117:CDS | 40.0% |
| ! | TCTAGAATCCTGCACATAGA+AGG | - | chr1.1:7504939-7504958 | None:intergenic | 40.0% |
| ! | TTTCTGCACAAGTGATAACG+AGG | - | chr1.1:7506636-7506655 | None:intergenic | 40.0% |
| !! | CTCTTGCTATGGGTTTTCAT+GGG | + | chr1.1:7506151-7506170 | MS.gene33117:CDS | 40.0% |
| !! | TCTTGCTATGGGTTTTCATG+GGG | + | chr1.1:7506152-7506171 | MS.gene33117:CDS | 40.0% |
| !!! | GGTACTGGTGTTCAGTTTTT+TGG | + | chr1.1:7506049-7506068 | MS.gene33117:CDS | 40.0% |
| !!! | GTTCCACTTGTTTTTGTTGG+TGG | + | chr1.1:7506385-7506404 | MS.gene33117:CDS | 40.0% |
| !!! | GTTTTTGTTGGTGGCTATGT+TGG | + | chr1.1:7506394-7506413 | MS.gene33117:CDS | 40.0% |
| AACCTCAAAGCCCACTATTC+TGG | - | chr1.1:7505226-7505245 | None:intergenic | 45.0% | |
| AAGCACAAGAAGAGACTGGT+TGG | + | chr1.1:7505963-7505982 | MS.gene33117:CDS | 45.0% | |
| AGTAATCCTCACTGCACAAC+TGG | - | chr1.1:7506681-7506700 | None:intergenic | 45.0% | |
| ATAGGGGGAATACTCCCATT+TGG | + | chr1.1:7506517-7506536 | MS.gene33117:CDS | 45.0% | |
| ATCCTGATCCACACGCTTTA+TGG | - | chr1.1:7504982-7505001 | None:intergenic | 45.0% | |
| ATCCTGCACATAGAAGGTAG+AGG | - | chr1.1:7504933-7504952 | None:intergenic | 45.0% | |
| ATTAGCCCACCTCTGTTTGA+AGG | - | chr1.1:7506121-7506140 | None:intergenic | 45.0% | |
| ATTTACCTCTGCCTACTTGC+AGG | + | chr1.1:7505754-7505773 | MS.gene33117:intron | 45.0% | |
| CACCTCTGTTTGAAGGAGAA+AGG | - | chr1.1:7506114-7506133 | None:intergenic | 45.0% | |
| CACTGAATCTGCCAGAATAG+TGG | + | chr1.1:7505212-7505231 | MS.gene33117:CDS | 45.0% | |
| CGCTTTATGGGAACAACCAA+AGG | - | chr1.1:7504969-7504988 | None:intergenic | 45.0% | |
| CTTGGCATATGCAAGCCAAT+AGG | - | chr1.1:7505561-7505580 | None:intergenic | 45.0% | |
| CTTTCTCCTTCAAACAGAGG+TGG | + | chr1.1:7506112-7506131 | MS.gene33117:CDS | 45.0% | |
| GGTTTCCATGTTGGACTCAA+AGG | + | chr1.1:7505020-7505039 | MS.gene33117:CDS | 45.0% | |
| GTGGCCTAAAAACATCACCA+TGG | - | chr1.1:7505997-7506016 | None:intergenic | 45.0% | |
| TCAGTCTGTCAAACCAGTTG+TGG | + | chr1.1:7505291-7505310 | MS.gene33117:intron | 45.0% | |
| TCATGTACCACGCTTGTTCA+GGG | - | chr1.1:7506477-7506496 | None:intergenic | 45.0% | |
| TCCTGATCCACACGCTTTAT+GGG | - | chr1.1:7504981-7505000 | None:intergenic | 45.0% | |
| TGACAGCTATGCTCTTGCTA+TGG | + | chr1.1:7506140-7506159 | MS.gene33117:CDS | 45.0% | |
| TGCAAGTAGGCAGAGGTAAA+TGG | - | chr1.1:7505755-7505774 | None:intergenic | 45.0% | |
| TGCGTAAAATCCAATGGTGC+CGG | - | chr1.1:7506866-7506885 | None:intergenic | 45.0% | |
| TGTGCAGTGAGGATTACTTG+TGG | + | chr1.1:7506683-7506702 | MS.gene33117:CDS | 45.0% | |
| TTCATGTACCACGCTTGTTC+AGG | - | chr1.1:7506478-7506497 | None:intergenic | 45.0% | |
| ! | ACAATGCTCTTTGCTGTCCT+TGG | + | chr1.1:7506085-7506104 | MS.gene33117:CDS | 45.0% |
| ! | ATGTGAAGTGGGCTTCAAGA+TGG | + | chr1.1:7505783-7505802 | MS.gene33117:CDS | 45.0% |
| ! | CATCTTTGGCTTCCTCTTTC+TGG | + | chr1.1:7506600-7506619 | MS.gene33117:CDS | 45.0% |
| ! | GAAGAAGCACAAGAAGAGAC+TGG | + | chr1.1:7505959-7505978 | MS.gene33117:CDS | 45.0% |
| ! | GACAGCTATGCTCTTGCTAT+GGG | + | chr1.1:7506141-7506160 | MS.gene33117:CDS | 45.0% |
| ! | TGTGAAGTGGGCTTCAAGAT+GGG | + | chr1.1:7505784-7505803 | MS.gene33117:CDS | 45.0% |
| ! | TTGGTGGCTATGTTGGATTC+AGG | + | chr1.1:7506401-7506420 | MS.gene33117:CDS | 45.0% |
| ! | TTTGTTGTAACCGGCACCAT+TGG | + | chr1.1:7506853-7506872 | MS.gene33117:CDS | 45.0% |
| !! | ATTGGCTTGCATATGCCAAG+TGG | + | chr1.1:7505561-7505580 | MS.gene33117:intron | 45.0% |
| !! | GAGTATCGGGTGAACATGTA+CGG | + | chr1.1:7504835-7504854 | MS.gene33117:intron | 45.0% |
| !! | GCTCTTGCTATGGGTTTTCA+TGG | + | chr1.1:7506150-7506169 | MS.gene33117:CDS | 45.0% |
| !! | GCTTTGAGGTTAAGCCATTC+AGG | + | chr1.1:7505235-7505254 | MS.gene33117:CDS | 45.0% |
| !!! | ACGCATGCTTTTGGTTCACA+AGG | + | chr1.1:7506881-7506900 | MS.gene33117:CDS | 45.0% |
| AAAATGGCAGAGACAGAGGC+AGG | - | chr1.1:7506268-7506287 | None:intergenic | 50.0% | |
| AAATGGCAGAGACAGAGGCA+GGG | - | chr1.1:7506267-7506286 | None:intergenic | 50.0% | |
| ACAAGCGTGGTACATGAACC+CGG | + | chr1.1:7506480-7506499 | MS.gene33117:CDS | 50.0% | |
| ACTGGTTGGAAGCTTGTCCA+TGG | + | chr1.1:7505977-7505996 | MS.gene33117:CDS | 50.0% | |
| ATGTTTAGCATGGGGGTCAC+AGG | - | chr1.1:7505410-7505429 | None:intergenic | 50.0% | |
| CACAGACATGCAGACCTGAA+TGG | - | chr1.1:7505252-7505271 | None:intergenic | 50.0% | |
| CACATCACTCTCCTGCAAGT+AGG | - | chr1.1:7505768-7505787 | None:intergenic | 50.0% | |
| CCTATCAGAACTGAGAAGGC+CGG | - | chr1.1:7506502-7506521 | None:intergenic | 50.0% | |
| CTACTTCCAGTTGTGCAGTG+AGG | + | chr1.1:7506672-7506691 | MS.gene33117:CDS | 50.0% | |
| CTATCAGAACTGAGAAGGCC+GGG | - | chr1.1:7506501-7506520 | None:intergenic | 50.0% | |
| CTGGAAGTAGCAAAGCACGA+CGG | - | chr1.1:7506662-7506681 | None:intergenic | 50.0% | |
| CTTGTTCAGGGATCTGCCTT+GGG | - | chr1.1:7506465-7506484 | None:intergenic | 50.0% | |
| GAACAAGACTGCAGTCCTGA+GGG | - | chr1.1:7506245-7506264 | None:intergenic | 50.0% | |
| GCAGGAGAGTGATGTGAAGT+GGG | + | chr1.1:7505772-7505791 | MS.gene33117:intron | 50.0% | |
| GCAGTGAGGATTACTTGTGG+TGG | + | chr1.1:7506686-7506705 | MS.gene33117:CDS | 50.0% | |
| GGATGACGAAGACCAGAAAG+AGG | - | chr1.1:7506615-7506634 | None:intergenic | 50.0% | |
| GGTTGTTCCCATAAAGCGTG+TGG | + | chr1.1:7504971-7504990 | MS.gene33117:CDS | 50.0% | |
| GTGAGGATTACTTGTGGTGG+TGG | + | chr1.1:7506689-7506708 | MS.gene33117:CDS | 50.0% | |
| TCCCATAAAGCGTGTGGATC+AGG | + | chr1.1:7504977-7504996 | MS.gene33117:CDS | 50.0% | |
| TCCCCCTATCAGAACTGAGA+AGG | - | chr1.1:7506506-7506525 | None:intergenic | 50.0% | |
| TGCAGGAGAGTGATGTGAAG+TGG | + | chr1.1:7505771-7505790 | MS.gene33117:intron | 50.0% | |
| TGCCTCTACCTTCTATGTGC+AGG | + | chr1.1:7504928-7504947 | MS.gene33117:intron | 50.0% | |
| ! | CGGCCTTCTCAGTTCTGATA+GGG | + | chr1.1:7506500-7506519 | MS.gene33117:CDS | 50.0% |
| ! | GCCTTCTCAGTTCTGATAGG+GGG | + | chr1.1:7506502-7506521 | MS.gene33117:CDS | 50.0% |
| ! | GGCCTTCTCAGTTCTGATAG+GGG | + | chr1.1:7506501-7506520 | MS.gene33117:CDS | 50.0% |
| ! | TCATCTGGAGCTGTGCCATT+TGG | + | chr1.1:7506322-7506341 | MS.gene33117:CDS | 50.0% |
| !! | AATCTTGGAGAAGTGCTCCG+TGG | + | chr1.1:7504590-7504609 | MS.gene33117:CDS | 50.0% |
| !! | GGTGCCGGTTACAACAAAGA+AGG | - | chr1.1:7506851-7506870 | None:intergenic | 50.0% |
| !! | TGCCAGAATAGTGGGCTTTG+AGG | + | chr1.1:7505221-7505240 | MS.gene33117:CDS | 50.0% |
| ACTCTCCTGCAAGTAGGCAG+AGG | - | chr1.1:7505762-7505781 | None:intergenic | 55.0% | |
| GCTTGTTCAGGGATCTGCCT+TGG | - | chr1.1:7506466-7506485 | None:intergenic | 55.0% | |
| GGAACAAGACTGCAGTCCTG+AGG | - | chr1.1:7506246-7506265 | None:intergenic | 55.0% | |
| GTGCAGAAGAGCCAGATGTG+AGG | - | chr1.1:7506723-7506742 | None:intergenic | 55.0% | |
| TGGCGCTCTTACCTCACATC+TGG | + | chr1.1:7506709-7506728 | MS.gene33117:CDS | 55.0% | |
| TGTCCTCTTTCTCTCGGGCA+TGG | + | chr1.1:7505871-7505890 | MS.gene33117:CDS | 55.0% | |
| ! | CCGGCCTTCTCAGTTCTGAT+AGG | + | chr1.1:7506499-7506518 | MS.gene33117:CDS | 55.0% |
| CCACCATGCCCGAGAGAAAG+AGG | - | chr1.1:7505877-7505896 | None:intergenic | 60.0% | |
| CCTCTTTCTCTCGGGCATGG+TGG | + | chr1.1:7505874-7505893 | MS.gene33117:CDS | 60.0% | |
| GGCAGATCCCTGAACAAGCG+TGG | + | chr1.1:7506467-7506486 | MS.gene33117:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 7504467 | 7506933 | 7504467 | ID=MS.gene33117 |
| chr1.1 | mRNA | 7504467 | 7506933 | 7504467 | ID=MS.gene33117.t1;Parent=MS.gene33117 |
| chr1.1 | exon | 7504467 | 7504640 | 7504467 | ID=MS.gene33117.t1.exon1;Parent=MS.gene33117.t1 |
| chr1.1 | CDS | 7504467 | 7504640 | 7504467 | ID=cds.MS.gene33117.t1;Parent=MS.gene33117.t1 |
| chr1.1 | exon | 7504742 | 7504851 | 7504742 | ID=MS.gene33117.t1.exon2;Parent=MS.gene33117.t1 |
| chr1.1 | CDS | 7504742 | 7504851 | 7504742 | ID=cds.MS.gene33117.t1;Parent=MS.gene33117.t1 |
| chr1.1 | exon | 7504950 | 7505055 | 7504950 | ID=MS.gene33117.t1.exon3;Parent=MS.gene33117.t1 |
| chr1.1 | CDS | 7504950 | 7505055 | 7504950 | ID=cds.MS.gene33117.t1;Parent=MS.gene33117.t1 |
| chr1.1 | exon | 7505144 | 7505256 | 7505144 | ID=MS.gene33117.t1.exon4;Parent=MS.gene33117.t1 |
| chr1.1 | CDS | 7505144 | 7505256 | 7505144 | ID=cds.MS.gene33117.t1;Parent=MS.gene33117.t1 |
| chr1.1 | exon | 7505357 | 7505507 | 7505357 | ID=MS.gene33117.t1.exon5;Parent=MS.gene33117.t1 |
| chr1.1 | CDS | 7505357 | 7505507 | 7505357 | ID=cds.MS.gene33117.t1;Parent=MS.gene33117.t1 |
| chr1.1 | exon | 7505776 | 7506933 | 7505776 | ID=MS.gene33117.t1.exon6;Parent=MS.gene33117.t1 |
| chr1.1 | CDS | 7505776 | 7506933 | 7505776 | ID=cds.MS.gene33117.t1;Parent=MS.gene33117.t1 |
| Gene Sequence |
| Protein sequence |
