Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020254.t1 | XP_013444320.1 | 99.4 | 648 | 4 | 0 | 1 | 648 | 1 | 648 | 0.00E+00 | 1285.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020254.t1 | Q9LIC2 | 88.1 | 631 | 72 | 2 | 21 | 648 | 11 | 641 | 0.0e+00 | 1125.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020254.t1 | A0A072TLT0 | 99.4 | 648 | 4 | 0 | 1 | 648 | 1 | 648 | 0.0e+00 | 1285.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene016086 | MS.gene020254 | PPI |
MS.gene014910 | MS.gene020254 | PPI |
MS.gene58761 | MS.gene020254 | PPI |
MS.gene011190 | MS.gene020254 | PPI |
MS.gene041418 | MS.gene020254 | PPI |
MS.gene36542 | MS.gene020254 | PPI |
MS.gene42664 | MS.gene020254 | PPI |
MS.gene57710 | MS.gene020254 | PPI |
MS.gene33117 | MS.gene020254 | PPI |
MS.gene058486 | MS.gene020254 | PPI |
MS.gene80181 | MS.gene020254 | PPI |
MS.gene036639 | MS.gene020254 | PPI |
MS.gene80184 | MS.gene020254 | PPI |
MS.gene32702 | MS.gene020254 | PPI |
MS.gene36992 | MS.gene020254 | PPI |
MS.gene36990 | MS.gene020254 | PPI |
MS.gene051485 | MS.gene020254 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020254.t1 | MTR_8g016270 | 99.383 | 648 | 4 | 0 | 1 | 648 | 1 | 648 | 0.0 | 1335 |
MS.gene020254.t1 | MTR_3g105950 | 77.110 | 616 | 139 | 2 | 34 | 648 | 22 | 636 | 0.0 | 974 |
MS.gene020254.t1 | MTR_1g014080 | 75.118 | 635 | 155 | 3 | 16 | 648 | 4 | 637 | 0.0 | 971 |
MS.gene020254.t1 | MTR_5g098730 | 44.597 | 657 | 306 | 14 | 30 | 648 | 29 | 665 | 1.25e-178 | 523 |
MS.gene020254.t1 | MTR_3g082140 | 43.049 | 669 | 318 | 14 | 20 | 648 | 14 | 659 | 2.06e-175 | 514 |
MS.gene020254.t1 | MTR_0204s0010 | 48.035 | 458 | 214 | 7 | 204 | 648 | 2 | 448 | 7.03e-150 | 441 |
MS.gene020254.t1 | MTR_6g074910 | 33.550 | 614 | 349 | 8 | 43 | 648 | 26 | 588 | 3.38e-119 | 367 |
MS.gene020254.t1 | MTR_5g077170 | 32.951 | 610 | 356 | 8 | 45 | 648 | 29 | 591 | 1.74e-112 | 350 |
MS.gene020254.t1 | MTR_2g006300 | 32.630 | 616 | 350 | 10 | 43 | 648 | 23 | 583 | 2.76e-96 | 308 |
MS.gene020254.t1 | MTR_8g088730 | 33.119 | 622 | 345 | 11 | 41 | 648 | 25 | 589 | 3.52e-96 | 307 |
MS.gene020254.t1 | MTR_4g053270 | 30.542 | 609 | 364 | 10 | 45 | 646 | 31 | 587 | 7.74e-91 | 293 |
MS.gene020254.t1 | MTR_7g060560 | 60.169 | 118 | 46 | 1 | 102 | 219 | 273 | 389 | 5.63e-37 | 142 |
MS.gene020254.t1 | MTR_3g090510 | 61.468 | 109 | 41 | 1 | 111 | 219 | 285 | 392 | 1.80e-35 | 138 |
MS.gene020254.t1 | MTR_4g116770 | 40.541 | 185 | 99 | 4 | 24 | 206 | 13 | 188 | 3.00e-33 | 136 |
MS.gene020254.t1 | MTR_5g014340 | 54.206 | 107 | 43 | 2 | 105 | 211 | 1 | 101 | 7.27e-21 | 92.8 |
MS.gene020254.t1 | MTR_0249s0060 | 57.971 | 69 | 28 | 1 | 105 | 173 | 1 | 68 | 5.16e-14 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020254.t1 | AT3G13772 | 88.961 | 616 | 68 | 0 | 33 | 648 | 26 | 641 | 0.0 | 1163 |
MS.gene020254.t1 | AT1G55130 | 83.412 | 639 | 103 | 2 | 10 | 648 | 2 | 637 | 0.0 | 1129 |
MS.gene020254.t1 | AT5G25100 | 75.000 | 628 | 152 | 3 | 25 | 648 | 18 | 644 | 0.0 | 981 |
MS.gene020254.t1 | AT2G24170 | 75.040 | 629 | 152 | 3 | 24 | 648 | 10 | 637 | 0.0 | 977 |
MS.gene020254.t1 | AT5G10840 | 73.981 | 638 | 162 | 4 | 13 | 648 | 13 | 648 | 0.0 | 976 |
MS.gene020254.t1 | AT5G25100 | 74.173 | 635 | 152 | 4 | 25 | 648 | 18 | 651 | 0.0 | 974 |
MS.gene020254.t1 | AT2G24170 | 69.248 | 439 | 131 | 3 | 20 | 455 | 7 | 444 | 0.0 | 644 |
MS.gene020254.t1 | AT5G35160 | 45.210 | 668 | 309 | 14 | 20 | 648 | 9 | 658 | 0.0 | 550 |
MS.gene020254.t1 | AT5G35160 | 45.210 | 668 | 309 | 14 | 20 | 648 | 9 | 658 | 0.0 | 550 |
MS.gene020254.t1 | AT5G35160 | 45.210 | 668 | 309 | 14 | 20 | 648 | 9 | 658 | 0.0 | 550 |
MS.gene020254.t1 | AT5G35160 | 43.178 | 667 | 296 | 14 | 20 | 648 | 9 | 630 | 5.82e-173 | 507 |
MS.gene020254.t1 | AT4G12650 | 43.137 | 663 | 323 | 13 | 22 | 648 | 8 | 652 | 3.37e-172 | 506 |
MS.gene020254.t1 | AT2G01970 | 34.591 | 636 | 357 | 8 | 24 | 648 | 5 | 592 | 3.07e-125 | 383 |
MS.gene020254.t1 | AT5G37310 | 34.321 | 641 | 351 | 11 | 23 | 648 | 8 | 593 | 2.11e-120 | 370 |
MS.gene020254.t1 | AT5G37310 | 34.321 | 641 | 351 | 11 | 23 | 648 | 8 | 593 | 2.11e-120 | 370 |
MS.gene020254.t1 | AT1G14670 | 33.959 | 639 | 367 | 8 | 16 | 648 | 3 | 592 | 8.95e-117 | 361 |
MS.gene020254.t1 | AT1G08350 | 30.146 | 617 | 370 | 10 | 41 | 648 | 25 | 589 | 7.85e-103 | 325 |
MS.gene020254.t1 | AT1G08350 | 30.146 | 617 | 370 | 10 | 41 | 648 | 25 | 589 | 7.85e-103 | 325 |
MS.gene020254.t1 | AT1G10950 | 33.766 | 616 | 343 | 10 | 43 | 648 | 29 | 589 | 1.70e-99 | 316 |
MS.gene020254.t1 | AT1G08350 | 29.875 | 559 | 332 | 9 | 98 | 648 | 2 | 508 | 5.34e-90 | 289 |
MS.gene020254.t1 | AT1G08350 | 29.204 | 565 | 330 | 10 | 41 | 596 | 25 | 528 | 4.17e-86 | 280 |
Find 165 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACATATGATGTTTCCTTTA+AGG | 0.044878 | 8.4:+75267372 | MS.gene020254:CDS |
TGTGAACAGTGCAGAAAATT+TGG | 0.158327 | 8.4:+75266074 | MS.gene020254:CDS |
TGATTGCTCTAGTGTGTTTA+TGG | 0.159017 | 8.4:+75268056 | MS.gene020254:CDS |
TTTAATCAGCAATACCTTAA+AGG | 0.196435 | 8.4:-75267386 | None:intergenic |
GGTACTGGTGTTCAGATATT+TGG | 0.220183 | 8.4:+75267755 | MS.gene020254:CDS |
CATTCCACTCCTTGTATTCA+TGG | 0.232106 | 8.4:-75267249 | None:intergenic |
TTGTGCTGAATGCTTTGATC+TGG | 0.244839 | 8.4:+75267996 | MS.gene020254:CDS |
TGTTGCTTGCCATACAATTT+TGG | 0.253734 | 8.4:+75266282 | MS.gene020254:CDS |
GTCCATTCCTTCTACCTTCC+TGG | 0.265299 | 8.4:+75264748 | MS.gene020254:CDS |
AACCAGTTCTACTACATCTT+TGG | 0.285370 | 8.4:+75268292 | MS.gene020254:CDS |
TTCACAGGGTCTTCAATTGC+TGG | 0.298618 | 8.4:-75268133 | None:intergenic |
TTGGCTTCTATGCTTGCTTC+TGG | 0.307454 | 8.4:+75268578 | MS.gene020254:CDS |
CAAAGCAAATTTGAATTGAT+TGG | 0.317059 | 8.4:-75267722 | None:intergenic |
TCCTCTGGGGCAGTTCCCTT+TGG | 0.325164 | 8.4:+75268028 | MS.gene020254:CDS |
GAATTGAACATGCAGGGTTT+TGG | 0.326292 | 8.4:+75266505 | MS.gene020254:intron |
TCTTTATCCTGACATCAATA+TGG | 0.327876 | 8.4:+75268266 | MS.gene020254:CDS |
GTGAACAGTGCAGAAAATTT+GGG | 0.330941 | 8.4:+75266075 | MS.gene020254:CDS |
TGCACTGTTCACAATCTTAG+AGG | 0.332330 | 8.4:-75266064 | None:intergenic |
ATACGAGCAGAACCAGTTTC+AGG | 0.334998 | 8.4:-75266783 | None:intergenic |
ATCGGTACCCTTGGTCTTTG+TGG | 0.335581 | 8.4:+75268087 | MS.gene020254:CDS |
AAAACTGCGTTTATGTTTCC+GGG | 0.337956 | 8.4:+75267953 | MS.gene020254:CDS |
TCTCAGGCATCCTTTACTTT+GGG | 0.341278 | 8.4:+75268509 | MS.gene020254:CDS |
GTCTCAGGCATCCTTTACTT+TGG | 0.348613 | 8.4:+75268508 | MS.gene020254:CDS |
TTCAGGAAAGTGAGATCAAA+TGG | 0.354636 | 8.4:+75267477 | MS.gene020254:intron |
TGCTCGTATTGTTGGATTTG+AGG | 0.356694 | 8.4:+75266797 | MS.gene020254:CDS |
TGTGTCTAGCTGGTTATAAT+TGG | 0.360277 | 8.4:-75267639 | None:intergenic |
ATTGGTGGCATTCTTCCCTT+TGG | 0.369375 | 8.4:+75268223 | MS.gene020254:CDS |
AGAAAATTGAGTAGAGGAAA+AGG | 0.378567 | 8.4:-75268453 | None:intergenic |
CATTGAAAACTCAATATATA+CGG | 0.380834 | 8.4:+75266119 | MS.gene020254:CDS |
GGTTCTTGTCTCCATCTAAT+CGG | 0.384734 | 8.4:+75267813 | MS.gene020254:CDS |
TGTGCTGAATGCTTTGATCT+GGG | 0.386011 | 8.4:+75267997 | MS.gene020254:CDS |
TTTGTTGTGACTGGAACAAT+TGG | 0.391069 | 8.4:+75268559 | MS.gene020254:CDS |
GTCTTTGTGGGCAGTTACTT+AGG | 0.396377 | 8.4:+75268100 | MS.gene020254:CDS |
GTGTTTATGGTTCGGTATAT+CGG | 0.398070 | 8.4:+75268069 | MS.gene020254:CDS |
TATGCCTTCTTTGTTGTGAC+TGG | 0.404522 | 8.4:+75268550 | MS.gene020254:CDS |
TCGGTACCCTTGGTCTTTGT+GGG | 0.405523 | 8.4:+75268088 | MS.gene020254:CDS |
TTTCTACTTCTTTACCAAGT+TGG | 0.406142 | 8.4:+75268471 | MS.gene020254:CDS |
GATGAGGCTCAAGAAGAAAC+AGG | 0.406874 | 8.4:+75267665 | MS.gene020254:CDS |
ATAAGACCTCCCCGATTAGA+TGG | 0.408883 | 8.4:-75267824 | None:intergenic |
ACTGGTTCTGCTCGTATTGT+TGG | 0.410560 | 8.4:+75266789 | MS.gene020254:CDS |
TATCACAAGGATCCTGAAAC+TGG | 0.411389 | 8.4:+75266771 | MS.gene020254:CDS |
TGGAGAGCTTACCTCACTGC+TGG | 0.411972 | 8.4:+75268415 | MS.gene020254:CDS |
CCTCATCTTGTGTGTCTAGC+TGG | 0.414499 | 8.4:-75267649 | None:intergenic |
GTTCTTGTCTCCATCTAATC+GGG | 0.422518 | 8.4:+75267814 | MS.gene020254:CDS |
GCTCTAGTGTGTTTATGGTT+CGG | 0.422770 | 8.4:+75268061 | MS.gene020254:CDS |
TGTAGTCTTCACTGCACAAC+TGG | 0.424133 | 8.4:-75268384 | None:intergenic |
AGCCAAAGATGTAGTAGAAC+TGG | 0.429233 | 8.4:-75268294 | None:intergenic |
TCTCAGCACAGGTGATCAAT+AGG | 0.430129 | 8.4:-75268339 | None:intergenic |
GGACGGAGGAGAAGAGGAAG+AGG | 0.432621 | 8.4:-75264729 | None:intergenic |
CCCGTCTTCTCAATTCTGAT+TGG | 0.435125 | 8.4:+75268205 | MS.gene020254:CDS |
GATCACCTGTGCTGAGATTA+CGG | 0.439518 | 8.4:+75268345 | MS.gene020254:CDS |
GTCTTCTCAATTCTGATTGG+TGG | 0.440448 | 8.4:+75268208 | MS.gene020254:CDS |
AGCAACGCCAGGAAGGTAGA+AGG | 0.446085 | 8.4:-75264755 | None:intergenic |
GACTGCAATGGTTCTACTGT+GGG | 0.450898 | 8.4:+75267847 | MS.gene020254:CDS |
CTCAATAAACACTGCACCAA+AGG | 0.453951 | 8.4:-75268239 | None:intergenic |
CTTTGTCTAAGAACAGCAAC+TGG | 0.454994 | 8.4:-75266536 | None:intergenic |
CTTTGCGTTTATGTTGGTAC+TGG | 0.455076 | 8.4:+75267740 | MS.gene020254:CDS |
TGTTTGTATCGACTTCTTGT+GGG | 0.458929 | 8.4:-75267336 | None:intergenic |
CGTGTTCATATGTAGTAGAT+TGG | 0.459577 | 8.4:-75266571 | None:intergenic |
TTCTTTCTTAGTTTCATATG+AGG | 0.461376 | 8.4:+75266242 | MS.gene020254:intron |
GTCATGTACCATGCCTGCTC+AGG | 0.462626 | 8.4:-75268181 | None:intergenic |
TTGTTTGTATCGACTTCTTG+TGG | 0.464195 | 8.4:-75267337 | None:intergenic |
AGCAAATTTGAATTGATTGG+TGG | 0.465043 | 8.4:-75267719 | None:intergenic |
TGCTGAATGCTTTGATCTGG+GGG | 0.465420 | 8.4:+75267999 | MS.gene020254:CDS |
GAGATTACAAAGCTGGTCTC+AGG | 0.477373 | 8.4:+75268493 | MS.gene020254:CDS |
GATTTGAGGTCACACCAAAC+AGG | 0.478437 | 8.4:+75266811 | MS.gene020254:CDS |
TCCTAGGCAGGTACCTGAGC+AGG | 0.480853 | 8.4:+75268168 | MS.gene020254:CDS |
CAATGATATTTGCTTTGCTA+GGG | 0.485657 | 8.4:+75267792 | MS.gene020254:CDS |
GGTTTAGCCATATTGATGTC+AGG | 0.485897 | 8.4:-75268273 | None:intergenic |
GTGCTGAATGCTTTGATCTG+GGG | 0.486277 | 8.4:+75267998 | MS.gene020254:CDS |
TGAAGACTAATAAAATTCCT+AGG | 0.489319 | 8.4:+75268152 | MS.gene020254:CDS |
TTTATTTGCTGGCTACTCCT+CGG | 0.489528 | 8.4:+75267880 | MS.gene020254:CDS |
GACTAATAAAATTCCTAGGC+AGG | 0.491913 | 8.4:+75268156 | MS.gene020254:CDS |
GGAAAAGAACAAGACCTGTT+TGG | 0.492347 | 8.4:-75266825 | None:intergenic |
CAGTTGCTGTTCTTAGACAA+AGG | 0.495185 | 8.4:+75266537 | MS.gene020254:CDS |
ACAGGGTGGAAACTTGTTCA+TGG | 0.497622 | 8.4:+75267683 | MS.gene020254:CDS |
GAGGAGAGTGGTGAAGAAGA+CGG | 0.498009 | 8.4:-75264710 | None:intergenic |
CAAGTTGGAGATTACAAAGC+TGG | 0.498464 | 8.4:+75268486 | MS.gene020254:CDS |
ATTCAGCATCCAAAATTGTA+TGG | 0.498469 | 8.4:-75266291 | None:intergenic |
AGGAATGGACGGAGGAGAAG+AGG | 0.502352 | 8.4:-75264735 | None:intergenic |
CGCCAGGAAGGTAGAAGGAA+TGG | 0.503101 | 8.4:-75264750 | None:intergenic |
TCAGATGAAGGAGAAGATGA+TGG | 0.504918 | 8.4:+75264651 | None:intergenic |
ACGTTTGTACAAGATGTTCA+AGG | 0.505523 | 8.4:+75267904 | MS.gene020254:CDS |
CAGTATTAACCATGAATACA+AGG | 0.509635 | 8.4:+75267240 | MS.gene020254:intron |
GGTGGTTGAACGGACGGAGA+TGG | 0.512558 | 8.4:-75264683 | None:intergenic |
GGATGATGAACACTATGAAA+AGG | 0.515971 | 8.4:-75268318 | None:intergenic |
GGGTTCAAAGGAAACTATCA+AGG | 0.516025 | 8.4:+75266605 | MS.gene020254:CDS |
ACAATGATATTTGCTTTGCT+AGG | 0.516465 | 8.4:+75267791 | MS.gene020254:CDS |
CAGCTTTGTAATCTCCAACT+TGG | 0.518191 | 8.4:-75268485 | None:intergenic |
TCAGGAAAGTGAGATCAAAT+GGG | 0.521155 | 8.4:+75267478 | MS.gene020254:intron |
TCAAGGGCACAGAGTGGAAG+AGG | 0.526236 | 8.4:+75267921 | MS.gene020254:CDS |
AATTTGCTTTGCGTTTATGT+TGG | 0.531771 | 8.4:+75267734 | MS.gene020254:CDS |
TGCTGTTCTTAGACAAAGGA+GGG | 0.532038 | 8.4:+75266541 | MS.gene020254:CDS |
TCAATAAACACTGCACCAAA+GGG | 0.532050 | 8.4:-75268238 | None:intergenic |
GGTGAAGAAGACGGTGGTGG+TGG | 0.533961 | 8.4:-75264701 | None:intergenic |
GGAGAAGAGGAAGAGGAGAG+TGG | 0.534040 | 8.4:-75264722 | None:intergenic |
GTTCGGTATATCGGTACCCT+TGG | 0.538820 | 8.4:+75268078 | MS.gene020254:CDS |
TTATTGCATGTCGTTACCTG+TGG | 0.538847 | 8.4:-75267280 | None:intergenic |
TTCTTAGTTTCATATGAGGA+AGG | 0.543451 | 8.4:+75266246 | MS.gene020254:intron |
GCACTGTTCACAATCTTAGA+GGG | 0.547351 | 8.4:-75266063 | None:intergenic |
AGAAGTAGAAAATTGAGTAG+AGG | 0.548551 | 8.4:-75268459 | None:intergenic |
AATCATCAGAGAGTTAATGA+TGG | 0.549853 | 8.4:-75267555 | None:intergenic |
TTATCATATACCCAAAGTAA+AGG | 0.553962 | 8.4:-75268519 | None:intergenic |
AAATCGCGAGGAGCAACGCC+AGG | 0.553994 | 8.4:-75264766 | None:intergenic |
AGAGCAATCATTGTTCCAAA+GGG | 0.559187 | 8.4:-75268043 | None:intergenic |
GCCTGCTCAGGTACCTGCCT+AGG | 0.559404 | 8.4:-75268169 | None:intergenic |
TTCAAGTAGTAGTAGTCATA+CGG | 0.560270 | 8.4:-75266030 | None:intergenic |
TGTTCCAGTCACAACAAAGA+AGG | 0.561147 | 8.4:-75268554 | None:intergenic |
CGCGAGGAGCAACGCCAGGA+AGG | 0.562154 | 8.4:-75264762 | None:intergenic |
GTCTAAGAACAGCAACTGGA+AGG | 0.564984 | 8.4:-75266532 | None:intergenic |
TAGAGCAATCATTGTTCCAA+AGG | 0.565492 | 8.4:-75268044 | None:intergenic |
TGTGCAGTGAAGACTACAAT+TGG | 0.571119 | 8.4:+75268389 | MS.gene020254:CDS |
GGCAGGTACCTGAGCAGGCA+TGG | 0.573677 | 8.4:+75268173 | MS.gene020254:CDS |
ACCAATCAGAATTGAGAAGA+CGG | 0.577155 | 8.4:-75268206 | None:intergenic |
TGAATGATGATCAGATCCAC+TGG | 0.579472 | 8.4:+75267528 | MS.gene020254:CDS |
CAGATGAAGGAGAAGATGAT+GGG | 0.580777 | 8.4:+75264652 | None:intergenic |
GGAGAGCTTACCTCACTGCT+GGG | 0.583273 | 8.4:+75268416 | MS.gene020254:CDS |
TGACTGCAATGGTTCTACTG+TGG | 0.583445 | 8.4:+75267846 | MS.gene020254:CDS |
CGTTTGTACAAGATGTTCAA+GGG | 0.585084 | 8.4:+75267905 | MS.gene020254:CDS |
TGTATGGCAAGCAACAGTAC+AGG | 0.589011 | 8.4:-75266275 | None:intergenic |
CCAATCAGAATTGAGAAGAC+GGG | 0.590171 | 8.4:-75268205 | None:intergenic |
ACATGACTCTAAAACTCAAG+TGG | 0.591447 | 8.4:-75266749 | None:intergenic |
CACAACCGTAATCTCAGCAC+AGG | 0.592033 | 8.4:-75268350 | None:intergenic |
AGACGGTGGTGGTGGTTGAA+CGG | 0.593253 | 8.4:-75264693 | None:intergenic |
GGTGGTGGTGGTTGAACGGA+CGG | 0.600564 | 8.4:-75264689 | None:intergenic |
AGTGGTGAAGAAGACGGTGG+TGG | 0.602668 | 8.4:-75264704 | None:intergenic |
TGAACAGTGCAGAAAATTTG+GGG | 0.603452 | 8.4:+75266076 | MS.gene020254:CDS |
GTGAGATCAAATGGGCATCA+CGG | 0.603865 | 8.4:+75267486 | MS.gene020254:CDS |
GATCAAATGGGCATCACGGT+GGG | 0.608304 | 8.4:+75267490 | MS.gene020254:CDS |
GTTCTTAGACAAAGGAGGGA+TGG | 0.608774 | 8.4:+75266545 | MS.gene020254:CDS |
GAGAGTGGTGAAGAAGACGG+TGG | 0.609885 | 8.4:-75264707 | None:intergenic |
AGTTAATGATGGAGAACCAG+TGG | 0.613944 | 8.4:-75267544 | None:intergenic |
GTGAAGACTACAATTGGTGG+TGG | 0.618344 | 8.4:+75268395 | MS.gene020254:CDS |
GTAACTGCCCACAAAGACCA+AGG | 0.618820 | 8.4:-75268095 | None:intergenic |
GATACAAAGAATTTGATGCA+AGG | 0.619971 | 8.4:+75267304 | MS.gene020254:CDS |
TTAACCATGAATACAAGGAG+TGG | 0.620436 | 8.4:+75267245 | MS.gene020254:CDS |
GTGGAATGACAAGAATCCAC+AGG | 0.621010 | 8.4:+75267264 | MS.gene020254:CDS |
GGGAGGTCTTATGACTGCAA+TGG | 0.622639 | 8.4:+75267835 | MS.gene020254:CDS |
GGTTCAAAGGAAACTATCAA+GGG | 0.629858 | 8.4:+75266606 | MS.gene020254:CDS |
TCACAGAAGAGTAGATCTTG+CGG | 0.630056 | 8.4:-75268606 | None:intergenic |
CCAGCTAGACACACAAGATG+AGG | 0.631162 | 8.4:+75267649 | MS.gene020254:CDS |
GGGTGACGCTCTCTATGTCA+AGG | 0.635028 | 8.4:+75265975 | MS.gene020254:intron |
TCATTGCCACCATTCCAGAA+AGG | 0.638258 | 8.4:-75267586 | None:intergenic |
GGTTGAACGGACGGAGATGG+CGG | 0.642205 | 8.4:-75264680 | None:intergenic |
TTGCTGTTCTTAGACAAAGG+AGG | 0.643328 | 8.4:+75266540 | MS.gene020254:CDS |
CATCTTGTACAAACGTGCCG+AGG | 0.645264 | 8.4:-75267897 | None:intergenic |
CAATCTACTACATATGAACA+CGG | 0.645840 | 8.4:+75266572 | MS.gene020254:CDS |
TCCAAAGGGAACTGCCCCAG+AGG | 0.651738 | 8.4:-75268029 | None:intergenic |
TTCTTGTCTCCATCTAATCG+GGG | 0.653447 | 8.4:+75267815 | MS.gene020254:CDS |
GCTGAATGCTTTGATCTGGG+GGG | 0.659660 | 8.4:+75268000 | MS.gene020254:CDS |
AGATCAAATGGGCATCACGG+TGG | 0.661600 | 8.4:+75267489 | MS.gene020254:CDS |
AGGAAGGTAGAAGGAATGGA+CGG | 0.665196 | 8.4:-75264746 | None:intergenic |
ACAAGAAGTCGATACAAACA+AGG | 0.669581 | 8.4:+75267339 | MS.gene020254:CDS |
CAATTTCATACAGAGCAAGG+AGG | 0.671919 | 8.4:+75266707 | MS.gene020254:intron |
AAGGTAGAAGGAATGGACGG+AGG | 0.679421 | 8.4:-75264743 | None:intergenic |
TTGTCTCCATCTAATCGGGG+AGG | 0.679868 | 8.4:+75267818 | MS.gene020254:CDS |
GCAGTGAAGACTACAATTGG+TGG | 0.685384 | 8.4:+75268392 | MS.gene020254:CDS |
TAACTGCCCACAAAGACCAA+GGG | 0.686563 | 8.4:-75268094 | None:intergenic |
ATGAGGCTCAAGAAGAAACA+GGG | 0.692303 | 8.4:+75267666 | MS.gene020254:CDS |
AGATGTTCAAGGGCACAGAG+TGG | 0.697032 | 8.4:+75267915 | MS.gene020254:CDS |
GAACAGTGCAGAAAATTTGG+GGG | 0.697685 | 8.4:+75266077 | MS.gene020254:CDS |
CGTACGGTTTGGAAATCGCG+AGG | 0.700988 | 8.4:-75264778 | None:intergenic |
GTTCAAAGGAAACTATCAAG+GGG | 0.706591 | 8.4:+75266607 | MS.gene020254:CDS |
CAGCTGATGACCCAGCAGTG+AGG | 0.737832 | 8.4:-75268426 | None:intergenic |
AGGCTCAAGAAGAAACAGGG+TGG | 0.742731 | 8.4:+75267669 | MS.gene020254:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTGTAAGTTATTTTTAA+TGG | + | chr8.4:75265282-75265301 | MS.gene020254:intron | 10.0% |
!! | AATTAAAGTTATCCAATATA+AGG | - | chr8.4:75266172-75266191 | None:intergenic | 15.0% |
!!! | ATTACTTTTGTGAATTTTTT+TGG | + | chr8.4:75266424-75266443 | MS.gene020254:intron | 15.0% |
!! | AAAGAAAGAAAAAATCAGTT+AGG | - | chr8.4:75266228-75266247 | None:intergenic | 20.0% |
!! | AGTGATAAATATATTGAAGT+TGG | + | chr8.4:75266366-75266385 | MS.gene020254:intron | 20.0% |
!! | CATTGAAAACTCAATATATA+CGG | + | chr8.4:75266119-75266138 | MS.gene020254:CDS | 20.0% |
!! | TAAAAGAAACATCATAATGA+AGG | - | chr8.4:75267006-75267025 | None:intergenic | 20.0% |
!!! | AATTGGAAATTCTAAGAATT+AGG | - | chr8.4:75266692-75266711 | None:intergenic | 20.0% |
!!! | ATAATATTGTGTTGTTGATT+CGG | + | chr8.4:75264942-75264961 | MS.gene020254:intron | 20.0% |
!!! | ATTGGAAATTCTAAGAATTA+GGG | - | chr8.4:75266691-75266710 | None:intergenic | 20.0% |
!!! | TAATTGAAGTAATTTGTGTT+TGG | + | chr8.4:75265022-75265041 | MS.gene020254:intron | 20.0% |
!!! | TCAATACTATGTTTTATATC+TGG | + | chr8.4:75266908-75266927 | MS.gene020254:intron | 20.0% |
! | AATATAAGGCAAAATCAGTT+AGG | - | chr8.4:75266158-75266177 | None:intergenic | 25.0% |
! | ACAGTTACAAGTTCATATAA+AGG | - | chr8.4:75265836-75265855 | None:intergenic | 25.0% |
! | ATGTTCAATTCAAAGCTTTA+GGG | - | chr8.4:75266496-75266515 | None:intergenic | 25.0% |
! | CAAAGCAAATTTGAATTGAT+TGG | - | chr8.4:75267725-75267744 | None:intergenic | 25.0% |
! | CATCAAAATATAAGGCAAAA+TGG | - | chr8.4:75266201-75266220 | None:intergenic | 25.0% |
! | TAGCTCATAGTATCATATAA+TGG | - | chr8.4:75267441-75267460 | None:intergenic | 25.0% |
! | TATCTTATCAATCAGCTATT+AGG | + | chr8.4:75267052-75267071 | MS.gene020254:intron | 25.0% |
! | TGAAGACTAATAAAATTCCT+AGG | + | chr8.4:75268152-75268171 | MS.gene020254:CDS | 25.0% |
! | TGATTTATTAGTTCACTTGT+GGG | + | chr8.4:75265948-75265967 | MS.gene020254:intron | 25.0% |
! | TTATCATATACCCAAAGTAA+AGG | - | chr8.4:75268522-75268541 | None:intergenic | 25.0% |
! | TTCTTTCTTAGTTTCATATG+AGG | + | chr8.4:75266242-75266261 | MS.gene020254:intron | 25.0% |
! | TTGATTTATTAGTTCACTTG+TGG | + | chr8.4:75265947-75265966 | MS.gene020254:intron | 25.0% |
! | TTTAATCAGCAATACCTTAA+AGG | - | chr8.4:75267389-75267408 | None:intergenic | 25.0% |
! | TTTCACAGAAATGATTTCAA+TGG | - | chr8.4:75267131-75267150 | None:intergenic | 25.0% |
!! | AAACATAAACGCAGTTTTTA+AGG | - | chr8.4:75267951-75267970 | None:intergenic | 25.0% |
!! | AGGTATTGCTGATTAAAAAT+TGG | + | chr8.4:75267392-75267411 | MS.gene020254:intron | 25.0% |
!! | TAGGTTGACATCAAAATATA+AGG | - | chr8.4:75266209-75266228 | None:intergenic | 25.0% |
!! | TTGGAAATTCTAAGAATTAG+GGG | - | chr8.4:75266690-75266709 | None:intergenic | 25.0% |
!! | TTTTCTTCCTCAAAATGAAA+AGG | - | chr8.4:75265785-75265804 | None:intergenic | 25.0% |
!!! | AACTTGTAACTGTTGATTTT+GGG | + | chr8.4:75265843-75265862 | MS.gene020254:intron | 25.0% |
!!! | ATAGTATCATATAATGGATG+AGG | - | chr8.4:75267435-75267454 | None:intergenic | 25.0% |
!!! | GAATTTTATTAGTCTTCACA+GGG | - | chr8.4:75268150-75268169 | None:intergenic | 25.0% |
!!! | TAACTGATTTTGCCTTATAT+TGG | + | chr8.4:75266157-75266176 | MS.gene020254:intron | 25.0% |
AAAAACTGCGTTTATGTTTC+CGG | + | chr8.4:75267952-75267971 | MS.gene020254:CDS | 30.0% | |
AAAAGAATGAGAAAGATGAC+GGG | - | chr8.4:75267089-75267108 | None:intergenic | 30.0% | |
AAGTTCAATCATATGATGCT+TGG | - | chr8.4:75266885-75266904 | None:intergenic | 30.0% | |
AATCATCAGAGAGTTAATGA+TGG | - | chr8.4:75267558-75267577 | None:intergenic | 30.0% | |
ACAATGATATTTGCTTTGCT+AGG | + | chr8.4:75267791-75267810 | MS.gene020254:CDS | 30.0% | |
AGAAAATTGAGTAGAGGAAA+AGG | - | chr8.4:75268456-75268475 | None:intergenic | 30.0% | |
AGAAGTAGAAAATTGAGTAG+AGG | - | chr8.4:75268462-75268481 | None:intergenic | 30.0% | |
AGCAAATTTGAATTGATTGG+TGG | - | chr8.4:75267722-75267741 | None:intergenic | 30.0% | |
ATGAAGGTAAGATCTATTAG+AGG | - | chr8.4:75266990-75267009 | None:intergenic | 30.0% | |
ATGATACTATGAGCTAAGAT+TGG | + | chr8.4:75267445-75267464 | MS.gene020254:intron | 30.0% | |
ATTCAGCATCCAAAATTGTA+TGG | - | chr8.4:75266294-75266313 | None:intergenic | 30.0% | |
CAAAAGAATGAGAAAGATGA+CGG | - | chr8.4:75267090-75267109 | None:intergenic | 30.0% | |
CAATCTACTACATATGAACA+CGG | + | chr8.4:75266572-75266591 | MS.gene020254:CDS | 30.0% | |
CAATGATATTTGCTTTGCTA+GGG | + | chr8.4:75267792-75267811 | MS.gene020254:CDS | 30.0% | |
CACATATGATGTTTCCTTTA+AGG | + | chr8.4:75267372-75267391 | MS.gene020254:CDS | 30.0% | |
CAGTATTAACCATGAATACA+AGG | + | chr8.4:75267240-75267259 | MS.gene020254:intron | 30.0% | |
CATGTTCAATTCAAAGCTTT+AGG | - | chr8.4:75266497-75266516 | None:intergenic | 30.0% | |
CGGATTATTTAATCTGTGTT+TGG | + | chr8.4:75264962-75264981 | MS.gene020254:intron | 30.0% | |
GAAAACTCAATATATACGGT+GGG | + | chr8.4:75266123-75266142 | MS.gene020254:intron | 30.0% | |
GATACAAAGAATTTGATGCA+AGG | + | chr8.4:75267304-75267323 | MS.gene020254:CDS | 30.0% | |
GCTGATTGATAAGATATCTA+TGG | - | chr8.4:75267048-75267067 | None:intergenic | 30.0% | |
TCTTTATCCTGACATCAATA+TGG | + | chr8.4:75268266-75268285 | MS.gene020254:CDS | 30.0% | |
TGAAAACTCAATATATACGG+TGG | + | chr8.4:75266122-75266141 | MS.gene020254:intron | 30.0% | |
TGATTGTTAGCGTAAATCTT+AGG | + | chr8.4:75265166-75265185 | MS.gene020254:intron | 30.0% | |
TTCAAGTAGTAGTAGTCATA+CGG | - | chr8.4:75266033-75266052 | None:intergenic | 30.0% | |
TTCTTAGTTTCATATGAGGA+AGG | + | chr8.4:75266246-75266265 | MS.gene020254:intron | 30.0% | |
TTGGAAGATGAAAGAAGAAA+TGG | - | chr8.4:75264808-75264827 | None:intergenic | 30.0% | |
TTTCTACTTCTTTACCAAGT+TGG | + | chr8.4:75268471-75268490 | MS.gene020254:CDS | 30.0% | |
TTTGAATCTTAGTGCATGTT+TGG | + | chr8.4:75265659-75265678 | MS.gene020254:intron | 30.0% | |
! | AAAACGTGTGCTTTTGAATT+AGG | - | chr8.4:75265467-75265486 | None:intergenic | 30.0% |
! | AATTTGCTTTGCGTTTATGT+TGG | + | chr8.4:75267734-75267753 | MS.gene020254:CDS | 30.0% |
! | ATGATTGTTCTTTTCCTTTC+TGG | + | chr8.4:75267572-75267591 | MS.gene020254:CDS | 30.0% |
! | GTTTTTATGGGTTTATTTGC+TGG | + | chr8.4:75267869-75267888 | MS.gene020254:CDS | 30.0% |
! | TGGAAATTCTAAGAATTAGG+GGG | - | chr8.4:75266689-75266708 | None:intergenic | 30.0% |
! | TGTTAGACCTTTTCATTTTG+AGG | + | chr8.4:75265775-75265794 | MS.gene020254:intron | 30.0% |
!! | CTATGTTTTATATCTGGAAC+TGG | + | chr8.4:75266914-75266933 | MS.gene020254:intron | 30.0% |
!!! | ACTTGTAACTGTTGATTTTG+GGG | + | chr8.4:75265844-75265863 | MS.gene020254:intron | 30.0% |
!!! | ATAGTTTTATTGCATGTGCT+TGG | + | chr8.4:75265919-75265938 | MS.gene020254:intron | 30.0% |
!!! | CTTTTGTGAATTTTTTTGGC+CGG | + | chr8.4:75266428-75266447 | MS.gene020254:intron | 30.0% |
!!! | GAACTTGTAACTGTTGATTT+TGG | + | chr8.4:75265842-75265861 | MS.gene020254:intron | 30.0% |
!!! | GGAATTTTATTAGTCTTCAC+AGG | - | chr8.4:75268151-75268170 | None:intergenic | 30.0% |
!!! | TTTTAGAGTCATGTATCACA+AGG | + | chr8.4:75266758-75266777 | MS.gene020254:CDS | 30.0% |
AAAACTGCGTTTATGTTTCC+GGG | + | chr8.4:75267953-75267972 | MS.gene020254:CDS | 35.0% | |
AAACTCAAGCTTAGTTGTTC+TGG | + | chr8.4:75265553-75265572 | MS.gene020254:intron | 35.0% | |
AACCAGTTCTACTACATCTT+TGG | + | chr8.4:75268292-75268311 | MS.gene020254:CDS | 35.0% | |
AAGAAGAAATGGAGAACGTA+CGG | - | chr8.4:75264797-75264816 | None:intergenic | 35.0% | |
AAGATACCAAAAAGAATGCC+CGG | - | chr8.4:75267974-75267993 | None:intergenic | 35.0% | |
ACAAGAAGTCGATACAAACA+AGG | + | chr8.4:75267339-75267358 | MS.gene020254:CDS | 35.0% | |
ACCAATCAGAATTGAGAAGA+CGG | - | chr8.4:75268209-75268228 | None:intergenic | 35.0% | |
ACGTTTGTACAAGATGTTCA+AGG | + | chr8.4:75267904-75267923 | MS.gene020254:CDS | 35.0% | |
AGAACAACTAAGCTTGAGTT+TGG | - | chr8.4:75265554-75265573 | None:intergenic | 35.0% | |
AGAGCAATCATTGTTCCAAA+GGG | - | chr8.4:75268046-75268065 | None:intergenic | 35.0% | |
ATACTATGAGCTAAGATTGG+TGG | + | chr8.4:75267448-75267467 | MS.gene020254:intron | 35.0% | |
ATGAGAGAAAATCAAGTACC+AGG | - | chr8.4:75267202-75267221 | None:intergenic | 35.0% | |
CATATAGAGAAGCCATAAAC+CGG | - | chr8.4:75266450-75266469 | None:intergenic | 35.0% | |
CGTGTTCATATGTAGTAGAT+TGG | - | chr8.4:75266574-75266593 | None:intergenic | 35.0% | |
CGTTTGTACAAGATGTTCAA+GGG | + | chr8.4:75267905-75267924 | MS.gene020254:CDS | 35.0% | |
GACTAATAAAATTCCTAGGC+AGG | + | chr8.4:75268156-75268175 | MS.gene020254:CDS | 35.0% | |
GGATGATGAACACTATGAAA+AGG | - | chr8.4:75268321-75268340 | None:intergenic | 35.0% | |
GGTTCAAAGGAAACTATCAA+GGG | + | chr8.4:75266606-75266625 | MS.gene020254:CDS | 35.0% | |
GTAGGAGTGATAATTGAGTT+AGG | - | chr8.4:75265409-75265428 | None:intergenic | 35.0% | |
GTGAACAGTGCAGAAAATTT+GGG | + | chr8.4:75266075-75266094 | MS.gene020254:CDS | 35.0% | |
GTTCAAAGGAAACTATCAAG+GGG | + | chr8.4:75266607-75266626 | MS.gene020254:CDS | 35.0% | |
GTTTCATTACTCATCACATG+TGG | - | chr8.4:75265753-75265772 | None:intergenic | 35.0% | |
TAGAGCAATCATTGTTCCAA+AGG | - | chr8.4:75268047-75268066 | None:intergenic | 35.0% | |
TATCAGTGTAGTGTTAGTGA+TGG | - | chr8.4:75265094-75265113 | None:intergenic | 35.0% | |
TCAATAAACACTGCACCAAA+GGG | - | chr8.4:75268241-75268260 | None:intergenic | 35.0% | |
TCAGGAAAGTGAGATCAAAT+GGG | + | chr8.4:75267478-75267497 | MS.gene020254:intron | 35.0% | |
TGAACAGTGCAGAAAATTTG+GGG | + | chr8.4:75266076-75266095 | MS.gene020254:CDS | 35.0% | |
TGATTGCTCTAGTGTGTTTA+TGG | + | chr8.4:75268056-75268075 | MS.gene020254:CDS | 35.0% | |
TGTGAACAGTGCAGAAAATT+TGG | + | chr8.4:75266074-75266093 | MS.gene020254:CDS | 35.0% | |
TGTGTCTAGCTGGTTATAAT+TGG | - | chr8.4:75267642-75267661 | None:intergenic | 35.0% | |
TTAACCATGAATACAAGGAG+TGG | + | chr8.4:75267245-75267264 | MS.gene020254:CDS | 35.0% | |
TTCAGGAAAGTGAGATCAAA+TGG | + | chr8.4:75267477-75267496 | MS.gene020254:intron | 35.0% | |
TTCCAATTTCATACAGAGCA+AGG | + | chr8.4:75266704-75266723 | MS.gene020254:intron | 35.0% | |
TTCGTATTTCCTTGGATCTA+GGG | + | chr8.4:75264841-75264860 | MS.gene020254:intron | 35.0% | |
! | ACACACCTGATAAAAAGTGT+TGG | + | chr8.4:75265348-75265367 | MS.gene020254:intron | 35.0% |
! | GTTCTACTGTGGGTTTTTAT+GGG | + | chr8.4:75267857-75267876 | MS.gene020254:CDS | 35.0% |
! | TTGTTCATGGAGATGTTTTC+AGG | + | chr8.4:75267696-75267715 | MS.gene020254:CDS | 35.0% |
! | TTTGTTGTGACTGGAACAAT+TGG | + | chr8.4:75268559-75268578 | MS.gene020254:CDS | 35.0% |
! | TTTTGCAAAAGCAGTGATTC+TGG | + | chr8.4:75265723-75265742 | MS.gene020254:intron | 35.0% |
!! | AAGCACCAACACTTTTTATC+AGG | - | chr8.4:75265356-75265375 | None:intergenic | 35.0% |
!! | AAGCTTTGAATTGAACATGC+AGG | + | chr8.4:75266498-75266517 | MS.gene020254:intron | 35.0% |
!! | ACATGACTCTAAAACTCAAG+TGG | - | chr8.4:75266752-75266771 | None:intergenic | 35.0% |
!! | AGCTTTGAATTGAACATGCA+GGG | + | chr8.4:75266499-75266518 | MS.gene020254:intron | 35.0% |
!! | GTGATGGATTGATTCTAAGA+CGG | - | chr8.4:75265078-75265097 | None:intergenic | 35.0% |
!! | GTGTTTATGGTTCGGTATAT+CGG | + | chr8.4:75268069-75268088 | MS.gene020254:CDS | 35.0% |
!! | TCACTGCTTTTGCAAAATCA+TGG | - | chr8.4:75265720-75265739 | None:intergenic | 35.0% |
!! | TGTTCTTTTCCTTTCTGGAA+TGG | + | chr8.4:75267577-75267596 | MS.gene020254:CDS | 35.0% |
!! | TGTTGCTTGCCATACAATTT+TGG | + | chr8.4:75266282-75266301 | MS.gene020254:CDS | 35.0% |
!! | TGTTTGTATCGACTTCTTGT+GGG | - | chr8.4:75267339-75267358 | None:intergenic | 35.0% |
!! | TTGTTTGTATCGACTTCTTG+TGG | - | chr8.4:75267340-75267359 | None:intergenic | 35.0% |
!!! | AAGATTGGTGGTACTTTTTC+AGG | + | chr8.4:75267460-75267479 | MS.gene020254:intron | 35.0% |
!!! | CTTGTAACTGTTGATTTTGG+GGG | + | chr8.4:75265845-75265864 | MS.gene020254:intron | 35.0% |
!!! | GAATTTTTTTGGCCGGTTTA+TGG | + | chr8.4:75266435-75266454 | MS.gene020254:intron | 35.0% |
!!! | GTTCTGGTGTGGTTTTAATT+TGG | + | chr8.4:75265569-75265588 | MS.gene020254:intron | 35.0% |
AAGCTAAAACCCTAGATCCA+AGG | - | chr8.4:75264853-75264872 | None:intergenic | 40.0% | |
AAGGAAATACGAACATAGCG+AGG | - | chr8.4:75264834-75264853 | None:intergenic | 40.0% | |
AATGCAACACCCACAAAGAT+AGG | - | chr8.4:75266857-75266876 | None:intergenic | 40.0% | |
ACCTCAGTCACAATTTGAGT+AGG | - | chr8.4:75265427-75265446 | None:intergenic | 40.0% | |
AGCCAAAGATGTAGTAGAAC+TGG | - | chr8.4:75268297-75268316 | None:intergenic | 40.0% | |
AGTTCAGCAGAAGGATACTT+AGG | + | chr8.4:75265599-75265618 | MS.gene020254:intron | 40.0% | |
ATGAGGCTCAAGAAGAAACA+GGG | + | chr8.4:75267666-75267685 | MS.gene020254:CDS | 40.0% | |
CAATTTCATACAGAGCAAGG+AGG | + | chr8.4:75266707-75266726 | MS.gene020254:intron | 40.0% | |
CATTCCACTCCTTGTATTCA+TGG | - | chr8.4:75267252-75267271 | None:intergenic | 40.0% | |
CCAATCAGAATTGAGAAGAC+GGG | - | chr8.4:75268208-75268227 | None:intergenic | 40.0% | |
CTCAATAAACACTGCACCAA+AGG | - | chr8.4:75268242-75268261 | None:intergenic | 40.0% | |
CTCCTTGCTCTGTATGAAAT+TGG | - | chr8.4:75266709-75266728 | None:intergenic | 40.0% | |
CTTTGCGTTTATGTTGGTAC+TGG | + | chr8.4:75267740-75267759 | MS.gene020254:CDS | 40.0% | |
CTTTGTCTAAGAACAGCAAC+TGG | - | chr8.4:75266539-75266558 | None:intergenic | 40.0% | |
GAACAGTGCAGAAAATTTGG+GGG | + | chr8.4:75266077-75266096 | MS.gene020254:CDS | 40.0% | |
GCACTGTTCACAATCTTAGA+GGG | - | chr8.4:75266066-75266085 | None:intergenic | 40.0% | |
GCTCTAGTGTGTTTATGGTT+CGG | + | chr8.4:75268061-75268080 | MS.gene020254:CDS | 40.0% | |
GGAAAAGAACAAGACCTGTT+TGG | - | chr8.4:75266828-75266847 | None:intergenic | 40.0% | |
GGGTTCAAAGGAAACTATCA+AGG | + | chr8.4:75266605-75266624 | MS.gene020254:CDS | 40.0% | |
GGTTCTTGTCTCCATCTAAT+CGG | + | chr8.4:75267813-75267832 | MS.gene020254:CDS | 40.0% | |
GGTTTAGCCATATTGATGTC+AGG | - | chr8.4:75268276-75268295 | None:intergenic | 40.0% | |
GTAGATTTCAAATGACTGCC+TGG | + | chr8.4:75267181-75267200 | MS.gene020254:intron | 40.0% | |
GTCTTCTCAATTCTGATTGG+TGG | + | chr8.4:75268208-75268227 | MS.gene020254:CDS | 40.0% | |
GTTCGTATTTCCTTGGATCT+AGG | + | chr8.4:75264840-75264859 | MS.gene020254:intron | 40.0% | |
GTTCTTGTCTCCATCTAATC+GGG | + | chr8.4:75267814-75267833 | MS.gene020254:CDS | 40.0% | |
TACGAACATAGCGAGGAAAT+TGG | - | chr8.4:75264827-75264846 | None:intergenic | 40.0% | |
TACTCAAATTGTGACTGAGG+TGG | + | chr8.4:75265426-75265445 | MS.gene020254:intron | 40.0% | |
TATCACAAGGATCCTGAAAC+TGG | + | chr8.4:75266771-75266790 | MS.gene020254:CDS | 40.0% | |
TCACAGAAGAGTAGATCTTG+CGG | - | chr8.4:75268609-75268628 | None:intergenic | 40.0% | |
TCCTACTCAAATTGTGACTG+AGG | + | chr8.4:75265423-75265442 | MS.gene020254:intron | 40.0% | |
TCGCTATGTTCGTATTTCCT+TGG | + | chr8.4:75264833-75264852 | MS.gene020254:intron | 40.0% | |
TCTCAGGCATCCTTTACTTT+GGG | + | chr8.4:75268509-75268528 | MS.gene020254:CDS | 40.0% | |
TGAATGATGATCAGATCCAC+TGG | + | chr8.4:75267528-75267547 | MS.gene020254:CDS | 40.0% | |
TGCACTGTTCACAATCTTAG+AGG | - | chr8.4:75266067-75266086 | None:intergenic | 40.0% | |
TGCTCGTATTGTTGGATTTG+AGG | + | chr8.4:75266797-75266816 | MS.gene020254:CDS | 40.0% | |
TGCTGTTCTTAGACAAAGGA+GGG | + | chr8.4:75266541-75266560 | MS.gene020254:CDS | 40.0% | |
TGTGCAGTGAAGACTACAAT+TGG | + | chr8.4:75268389-75268408 | MS.gene020254:CDS | 40.0% | |
TGTGCTGAATGCTTTGATCT+GGG | + | chr8.4:75267997-75268016 | MS.gene020254:CDS | 40.0% | |
TGTTCCAGTCACAACAAAGA+AGG | - | chr8.4:75268557-75268576 | None:intergenic | 40.0% | |
TTATTGCATGTCGTTACCTG+TGG | - | chr8.4:75267283-75267302 | None:intergenic | 40.0% | |
TTCTTGTCTCCATCTAATCG+GGG | + | chr8.4:75267815-75267834 | MS.gene020254:CDS | 40.0% | |
TTGTGCTGAATGCTTTGATC+TGG | + | chr8.4:75267996-75268015 | MS.gene020254:CDS | 40.0% | |
! | AGTTAATGATGGAGAACCAG+TGG | - | chr8.4:75267547-75267566 | None:intergenic | 40.0% |
! | ATGTTTCCGGGCATTCTTTT+TGG | + | chr8.4:75267965-75267984 | MS.gene020254:CDS | 40.0% |
! | CAAGTTGGAGATTACAAAGC+TGG | + | chr8.4:75268486-75268505 | MS.gene020254:CDS | 40.0% |
! | CAGCTTTGTAATCTCCAACT+TGG | - | chr8.4:75268488-75268507 | None:intergenic | 40.0% |
! | CAGTTGCTGTTCTTAGACAA+AGG | + | chr8.4:75266537-75266556 | MS.gene020254:CDS | 40.0% |
! | GAATTGAACATGCAGGGTTT+TGG | + | chr8.4:75266505-75266524 | MS.gene020254:intron | 40.0% |
! | GGAATGTTTAGTTCAGCAGA+AGG | + | chr8.4:75265590-75265609 | MS.gene020254:intron | 40.0% |
! | GGTTCTACTGTGGGTTTTTA+TGG | + | chr8.4:75267856-75267875 | MS.gene020254:CDS | 40.0% |
! | TATGAACACGGTTTTCGTGT+CGG | + | chr8.4:75266584-75266603 | MS.gene020254:CDS | 40.0% |
! | TATGCCTTCTTTGTTGTGAC+TGG | + | chr8.4:75268550-75268569 | MS.gene020254:CDS | 40.0% |
! | TGAGGTGGCTCAATCAATTT+TGG | + | chr8.4:75265441-75265460 | MS.gene020254:intron | 40.0% |
! | TTGCTGTTCTTAGACAAAGG+AGG | + | chr8.4:75266540-75266559 | MS.gene020254:CDS | 40.0% |
! | TTTATTTGCTGGCTACTCCT+CGG | + | chr8.4:75267880-75267899 | MS.gene020254:CDS | 40.0% |
!! | CTGCTTTTGCAAAATCATGG+TGG | - | chr8.4:75265717-75265736 | None:intergenic | 40.0% |
!! | GGTACTGGTGTTCAGATATT+TGG | + | chr8.4:75267755-75267774 | MS.gene020254:CDS | 40.0% |
!!! | ACTGTTGATTTTGGGGGATT+TGG | + | chr8.4:75265851-75265870 | MS.gene020254:intron | 40.0% |
!!! | TCTTTTCCTTTCTGGAATGG+TGG | + | chr8.4:75267580-75267599 | MS.gene020254:CDS | 40.0% |
AGGAAGGTAGAAGGAATGGA+CGG | - | chr8.4:75264749-75264768 | None:intergenic | 45.0% | |
ATAAGACCTCCCCGATTAGA+TGG | - | chr8.4:75267827-75267846 | None:intergenic | 45.0% | |
ATACGAGCAGAACCAGTTTC+AGG | - | chr8.4:75266786-75266805 | None:intergenic | 45.0% | |
ATTAGTTCACTTGTGGGACC+AGG | + | chr8.4:75265954-75265973 | MS.gene020254:intron | 45.0% | |
CAAGCTTAGTTGTTCTGGTG+TGG | + | chr8.4:75265558-75265577 | MS.gene020254:intron | 45.0% | |
CCCGTCTTCTCAATTCTGAT+TGG | + | chr8.4:75268205-75268224 | MS.gene020254:CDS | 45.0% | |
CGCGAACACTTCTTTATCGA+AGG | - | chr8.4:75265137-75265156 | None:intergenic | 45.0% | |
GAAATGGAGAACGTACGGTT+TGG | - | chr8.4:75264792-75264811 | None:intergenic | 45.0% | |
GATCACCTGTGCTGAGATTA+CGG | + | chr8.4:75268345-75268364 | MS.gene020254:CDS | 45.0% | |
GATGAGGCTCAAGAAGAAAC+AGG | + | chr8.4:75267665-75267684 | MS.gene020254:CDS | 45.0% | |
GCAGTGAAGACTACAATTGG+TGG | + | chr8.4:75268392-75268411 | MS.gene020254:CDS | 45.0% | |
GTCTAAGAACAGCAACTGGA+AGG | - | chr8.4:75266535-75266554 | None:intergenic | 45.0% | |
GTCTCAGGCATCCTTTACTT+TGG | + | chr8.4:75268508-75268527 | MS.gene020254:CDS | 45.0% | |
GTCTTTGTGGGCAGTTACTT+AGG | + | chr8.4:75268100-75268119 | MS.gene020254:CDS | 45.0% | |
GTGAAGACTACAATTGGTGG+TGG | + | chr8.4:75268395-75268414 | MS.gene020254:CDS | 45.0% | |
GTGAGATCAAATGGGCATCA+CGG | + | chr8.4:75267486-75267505 | MS.gene020254:CDS | 45.0% | |
GTGCTGAATGCTTTGATCTG+GGG | + | chr8.4:75267998-75268017 | MS.gene020254:CDS | 45.0% | |
GTGGAATGACAAGAATCCAC+AGG | + | chr8.4:75267264-75267283 | MS.gene020254:CDS | 45.0% | |
GTTCTTAGACAAAGGAGGGA+TGG | + | chr8.4:75266545-75266564 | MS.gene020254:CDS | 45.0% | |
TAACTGCCCACAAAGACCAA+GGG | - | chr8.4:75268097-75268116 | None:intergenic | 45.0% | |
TCATTGCCACCATTCCAGAA+AGG | - | chr8.4:75267589-75267608 | None:intergenic | 45.0% | |
TCTCAGCACAGGTGATCAAT+AGG | - | chr8.4:75268342-75268361 | None:intergenic | 45.0% | |
TGCTGAATGCTTTGATCTGG+GGG | + | chr8.4:75267999-75268018 | MS.gene020254:CDS | 45.0% | |
TGGAATGTAATCACGCGTGT+CGG | + | chr8.4:75265302-75265321 | MS.gene020254:intron | 45.0% | |
TGTAGTCTTCACTGCACAAC+TGG | - | chr8.4:75268387-75268406 | None:intergenic | 45.0% | |
TGTATGGCAAGCAACAGTAC+AGG | - | chr8.4:75266278-75266297 | None:intergenic | 45.0% | |
TTAGTTCACTTGTGGGACCA+GGG | + | chr8.4:75265955-75265974 | MS.gene020254:intron | 45.0% | |
TTCACAGGGTCTTCAATTGC+TGG | - | chr8.4:75268136-75268155 | None:intergenic | 45.0% | |
TTGGCTTCTATGCTTGCTTC+TGG | + | chr8.4:75268578-75268597 | MS.gene020254:CDS | 45.0% | |
! | ACAGGGTGGAAACTTGTTCA+TGG | + | chr8.4:75267683-75267702 | MS.gene020254:CDS | 45.0% |
! | ATGAACACGGTTTTCGTGTC+GGG | + | chr8.4:75266585-75266604 | MS.gene020254:CDS | 45.0% |
! | ATTGGTGGCATTCTTCCCTT+TGG | + | chr8.4:75268223-75268242 | MS.gene020254:CDS | 45.0% |
! | GAAGCACCAACACTTCTGAT+CGG | - | chr8.4:75265244-75265263 | None:intergenic | 45.0% |
! | GACTGCAATGGTTCTACTGT+GGG | + | chr8.4:75267847-75267866 | MS.gene020254:CDS | 45.0% |
! | GAGATTACAAAGCTGGTCTC+AGG | + | chr8.4:75268493-75268512 | MS.gene020254:CDS | 45.0% |
! | GATTTGAGGTCACACCAAAC+AGG | + | chr8.4:75266811-75266830 | MS.gene020254:CDS | 45.0% |
! | TGACTGCAATGGTTCTACTG+TGG | + | chr8.4:75267846-75267865 | MS.gene020254:CDS | 45.0% |
! | TTCTTTATCGAAGGCGTGTC+CGG | - | chr8.4:75265128-75265147 | None:intergenic | 45.0% |
!! | ACTGGTTCTGCTCGTATTGT+TGG | + | chr8.4:75266789-75266808 | MS.gene020254:CDS | 45.0% |
AAGGTAGAAGGAATGGACGG+AGG | - | chr8.4:75264746-75264765 | None:intergenic | 50.0% | |
AATTTGGGGGAGGTTCTTCG+AGG | + | chr8.4:75266090-75266109 | MS.gene020254:CDS | 50.0% | |
ACACCCACAAAGATAGGTGG+AGG | - | chr8.4:75266851-75266870 | None:intergenic | 50.0% | |
ACACTTCTGATCGGACGTGA+TGG | - | chr8.4:75265235-75265254 | None:intergenic | 50.0% | |
ACCCACAAAGATAGGTGGAG+GGG | - | chr8.4:75266849-75266868 | None:intergenic | 50.0% | |
AGATCAAATGGGCATCACGG+TGG | + | chr8.4:75267489-75267508 | MS.gene020254:CDS | 50.0% | |
AGGCTCAAGAAGAAACAGGG+TGG | + | chr8.4:75267669-75267688 | MS.gene020254:CDS | 50.0% | |
ATGGTGGCTCACTGGTATTC+TGG | - | chr8.4:75265701-75265720 | None:intergenic | 50.0% | |
CACAACCGTAATCTCAGCAC+AGG | - | chr8.4:75268353-75268372 | None:intergenic | 50.0% | |
CACCCACAAAGATAGGTGGA+GGG | - | chr8.4:75266850-75266869 | None:intergenic | 50.0% | |
CACTGATACGTGTCACACAC+CGG | + | chr8.4:75265106-75265125 | MS.gene020254:intron | 50.0% | |
CAGTGCAGAAAATTTGGGGG+AGG | + | chr8.4:75266080-75266099 | MS.gene020254:CDS | 50.0% | |
CATCTTGTACAAACGTGCCG+AGG | - | chr8.4:75267900-75267919 | None:intergenic | 50.0% | |
CCAGCTAGACACACAAGATG+AGG | + | chr8.4:75267649-75267668 | MS.gene020254:CDS | 50.0% | |
CCTCATCTTGTGTGTCTAGC+TGG | - | chr8.4:75267652-75267671 | None:intergenic | 50.0% | |
GAGGAGAGTGGTGAAGAAGA+CGG | - | chr8.4:75264713-75264732 | None:intergenic | 50.0% | |
GATCAAATGGGCATCACGGT+GGG | + | chr8.4:75267490-75267509 | MS.gene020254:CDS | 50.0% | |
GCAAAATCATGGTGGCTCAC+TGG | - | chr8.4:75265709-75265728 | None:intergenic | 50.0% | |
GCAACACCCACAAAGATAGG+TGG | - | chr8.4:75266854-75266873 | None:intergenic | 50.0% | |
GCTGAATGCTTTGATCTGGG+GGG | + | chr8.4:75268000-75268019 | MS.gene020254:CDS | 50.0% | |
GTAACTGCCCACAAAGACCA+AGG | - | chr8.4:75268098-75268117 | None:intergenic | 50.0% | |
GTCCATTCCTTCTACCTTCC+TGG | + | chr8.4:75264748-75264767 | MS.gene020254:CDS | 50.0% | |
GTTCGGTATATCGGTACCCT+TGG | + | chr8.4:75268078-75268097 | MS.gene020254:CDS | 50.0% | |
TCCCCTCCACCTATCTTTGT+GGG | + | chr8.4:75266845-75266864 | MS.gene020254:intron | 50.0% | |
TTCCCCTCCACCTATCTTTG+TGG | + | chr8.4:75266844-75266863 | MS.gene020254:intron | 50.0% | |
TTGTCTCCATCTAATCGGGG+AGG | + | chr8.4:75267818-75267837 | MS.gene020254:CDS | 50.0% | |
! | AGATGTTCAAGGGCACAGAG+TGG | + | chr8.4:75267915-75267934 | MS.gene020254:CDS | 50.0% |
! | ATCGGTACCCTTGGTCTTTG+TGG | + | chr8.4:75268087-75268106 | MS.gene020254:CDS | 50.0% |
! | GGGAGGTCTTATGACTGCAA+TGG | + | chr8.4:75267835-75267854 | MS.gene020254:CDS | 50.0% |
! | GGTTTTCGTGTCGGGTTCAA+AGG | + | chr8.4:75266593-75266612 | MS.gene020254:CDS | 50.0% |
! | TCACGTCCGATCAGAAGTGT+TGG | + | chr8.4:75265235-75265254 | MS.gene020254:intron | 50.0% |
! | TCGGTACCCTTGGTCTTTGT+GGG | + | chr8.4:75268088-75268107 | MS.gene020254:CDS | 50.0% |
!! | TGAGAAAGATGACGGGTCAC+AGG | - | chr8.4:75267082-75267101 | None:intergenic | 50.0% |
AGCAACGCCAGGAAGGTAGA+AGG | - | chr8.4:75264758-75264777 | None:intergenic | 55.0% | |
AGGAATGGACGGAGGAGAAG+AGG | - | chr8.4:75264738-75264757 | None:intergenic | 55.0% | |
AGGTGTGTGTCCACGTGTCA+GGG | - | chr8.4:75265336-75265355 | None:intergenic | 55.0% | |
AGTGGTGAAGAAGACGGTGG+TGG | - | chr8.4:75264707-75264726 | None:intergenic | 55.0% | |
CGCCAGGAAGGTAGAAGGAA+TGG | - | chr8.4:75264753-75264772 | None:intergenic | 55.0% | |
GAGAGTGGTGAAGAAGACGG+TGG | - | chr8.4:75264710-75264729 | None:intergenic | 55.0% | |
GGAGAAGAGGAAGAGGAGAG+TGG | - | chr8.4:75264725-75264744 | None:intergenic | 55.0% | |
GGAGAGCTTACCTCACTGCT+GGG | + | chr8.4:75268416-75268435 | MS.gene020254:CDS | 55.0% | |
GGGTGACGCTCTCTATGTCA+AGG | + | chr8.4:75265975-75265994 | MS.gene020254:intron | 55.0% | |
GTCATGTACCATGCCTGCTC+AGG | - | chr8.4:75268184-75268203 | None:intergenic | 55.0% | |
TGGAGAGCTTACCTCACTGC+TGG | + | chr8.4:75268415-75268434 | MS.gene020254:CDS | 55.0% | |
! | CGTACGGTTTGGAAATCGCG+AGG | - | chr8.4:75264781-75264800 | None:intergenic | 55.0% |
! | TCAAGGGCACAGAGTGGAAG+AGG | + | chr8.4:75267921-75267940 | MS.gene020254:CDS | 55.0% |
!! | AGACGGTGGTGGTGGTTGAA+CGG | - | chr8.4:75264696-75264715 | None:intergenic | 55.0% |
!! | TGACATAGAGAGCGTCACCC+TGG | - | chr8.4:75265975-75265994 | None:intergenic | 55.0% |
AAATCGCGAGGAGCAACGCC+AGG | - | chr8.4:75264769-75264788 | None:intergenic | 60.0% | |
CAGCTGATGACCCAGCAGTG+AGG | - | chr8.4:75268429-75268448 | None:intergenic | 60.0% | |
CAGGTGTGTGTCCACGTGTC+AGG | - | chr8.4:75265337-75265356 | None:intergenic | 60.0% | |
GGACGGAGGAGAAGAGGAAG+AGG | - | chr8.4:75264732-75264751 | None:intergenic | 60.0% | |
GGTGGTTGAACGGACGGAGA+TGG | - | chr8.4:75264686-75264705 | None:intergenic | 60.0% | |
GGTTGAACGGACGGAGATGG+CGG | - | chr8.4:75264683-75264702 | None:intergenic | 60.0% | |
TCCAAAGGGAACTGCCCCAG+AGG | - | chr8.4:75268032-75268051 | None:intergenic | 60.0% | |
TCCTAGGCAGGTACCTGAGC+AGG | + | chr8.4:75268168-75268187 | MS.gene020254:CDS | 60.0% | |
! | GGTGAAGAAGACGGTGGTGG+TGG | - | chr8.4:75264704-75264723 | None:intergenic | 60.0% |
! | GGTGTTGTGACCCTGACACG+TGG | + | chr8.4:75265323-75265342 | MS.gene020254:intron | 60.0% |
!! | GGTGGTGGTGGTTGAACGGA+CGG | - | chr8.4:75264692-75264711 | None:intergenic | 60.0% |
!! | TCCTCTGGGGCAGTTCCCTT+TGG | + | chr8.4:75268028-75268047 | MS.gene020254:CDS | 60.0% |
ATCTGGGGGGAGCAGTCCTC+TGG | + | chr8.4:75268013-75268032 | MS.gene020254:CDS | 65.0% | |
GCCTGCTCAGGTACCTGCCT+AGG | - | chr8.4:75268172-75268191 | None:intergenic | 65.0% | |
GGCAGGTACCTGAGCAGGCA+TGG | + | chr8.4:75268173-75268192 | MS.gene020254:CDS | 65.0% | |
TCTGGGGGGAGCAGTCCTCT+GGG | + | chr8.4:75268014-75268033 | MS.gene020254:CDS | 65.0% | |
CGCGAGGAGCAACGCCAGGA+AGG | - | chr8.4:75264765-75264784 | None:intergenic | 70.0% | |
CTGGGGGGAGCAGTCCTCTG+GGG | + | chr8.4:75268015-75268034 | MS.gene020254:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 75264655 | 75268639 | 75264655 | ID=MS.gene020254 |
chr8.4 | mRNA | 75264655 | 75268639 | 75264655 | ID=MS.gene020254.t1;Parent=MS.gene020254 |
chr8.4 | exon | 75264655 | 75264795 | 75264655 | ID=MS.gene020254.t1.exon1;Parent=MS.gene020254.t1 |
chr8.4 | CDS | 75264655 | 75264795 | 75264655 | ID=cds.MS.gene020254.t1;Parent=MS.gene020254.t1 |
chr8.4 | exon | 75265976 | 75266140 | 75265976 | ID=MS.gene020254.t1.exon2;Parent=MS.gene020254.t1 |
chr8.4 | CDS | 75265976 | 75266140 | 75265976 | ID=cds.MS.gene020254.t1;Parent=MS.gene020254.t1 |
chr8.4 | exon | 75266253 | 75266362 | 75266253 | ID=MS.gene020254.t1.exon3;Parent=MS.gene020254.t1 |
chr8.4 | CDS | 75266253 | 75266362 | 75266253 | ID=cds.MS.gene020254.t1;Parent=MS.gene020254.t1 |
chr8.4 | exon | 75266520 | 75266628 | 75266520 | ID=MS.gene020254.t1.exon4;Parent=MS.gene020254.t1 |
chr8.4 | CDS | 75266520 | 75266628 | 75266520 | ID=cds.MS.gene020254.t1;Parent=MS.gene020254.t1 |
chr8.4 | exon | 75266720 | 75266832 | 75266720 | ID=MS.gene020254.t1.exon5;Parent=MS.gene020254.t1 |
chr8.4 | CDS | 75266720 | 75266832 | 75266720 | ID=cds.MS.gene020254.t1;Parent=MS.gene020254.t1 |
chr8.4 | exon | 75267243 | 75267393 | 75267243 | ID=MS.gene020254.t1.exon6;Parent=MS.gene020254.t1 |
chr8.4 | CDS | 75267243 | 75267393 | 75267243 | ID=cds.MS.gene020254.t1;Parent=MS.gene020254.t1 |
chr8.4 | exon | 75267482 | 75268639 | 75267482 | ID=MS.gene020254.t1.exon7;Parent=MS.gene020254.t1 |
chr8.4 | CDS | 75267482 | 75268639 | 75267482 | ID=cds.MS.gene020254.t1;Parent=MS.gene020254.t1 |
Gene Sequence |
Protein sequence |