Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80184.t1 | XP_003603291.1 | 99.8 | 636 | 1 | 0 | 1 | 636 | 1 | 636 | 0.00E+00 | 1255.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80184.t1 | Q9C5N2 | 83.3 | 645 | 98 | 3 | 1 | 636 | 1 | 644 | 2.5e-312 | 1072.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80184.t1 | G7J9U2 | 99.8 | 636 | 1 | 0 | 1 | 636 | 1 | 636 | 0.0e+00 | 1255.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052289 | MS.gene80184 | 0.820994 | 5.11E-53 | -1.69E-46 |
| MS.gene057195 | MS.gene80184 | 0.823068 | 1.69E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32702 | MS.gene80184 | PPI |
| MS.gene80184 | MS.gene036639 | PPI |
| MS.gene80184 | MS.gene014910 | PPI |
| MS.gene80184 | MS.gene016086 | PPI |
| MS.gene80184 | MS.gene32702 | PPI |
| MS.gene80184 | MS.gene36990 | PPI |
| MS.gene80184 | MS.gene58761 | PPI |
| MS.gene80184 | MS.gene57710 | PPI |
| MS.gene80184 | MS.gene80181 | PPI |
| MS.gene80184 | MS.gene33117 | PPI |
| MS.gene80184 | MS.gene36542 | PPI |
| MS.gene014910 | MS.gene80184 | PPI |
| MS.gene80184 | MS.gene42664 | PPI |
| MS.gene80184 | MS.gene051485 | PPI |
| MS.gene80184 | MS.gene36992 | PPI |
| MS.gene80184 | MS.gene020254 | PPI |
| MS.gene80184 | MS.gene058486 | PPI |
| MS.gene80184 | MS.gene041418 | PPI |
| MS.gene80184 | MS.gene011190 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80184.t1 | MTR_3g105950 | 99.843 | 636 | 1 | 0 | 1 | 636 | 1 | 636 | 0.0 | 1307 |
| MS.gene80184.t1 | MTR_1g014080 | 89.655 | 638 | 63 | 3 | 1 | 636 | 1 | 637 | 0.0 | 1160 |
| MS.gene80184.t1 | MTR_8g016270 | 75.475 | 632 | 153 | 2 | 6 | 636 | 18 | 648 | 0.0 | 999 |
| MS.gene80184.t1 | MTR_5g098730 | 45.023 | 653 | 301 | 14 | 22 | 636 | 33 | 665 | 0.0 | 531 |
| MS.gene80184.t1 | MTR_3g082140 | 44.720 | 644 | 316 | 15 | 22 | 636 | 27 | 659 | 2.89e-179 | 524 |
| MS.gene80184.t1 | MTR_0204s0010 | 48.690 | 458 | 212 | 7 | 191 | 636 | 2 | 448 | 1.30e-150 | 443 |
| MS.gene80184.t1 | MTR_6g074910 | 32.237 | 608 | 357 | 8 | 35 | 636 | 30 | 588 | 6.43e-111 | 345 |
| MS.gene80184.t1 | MTR_5g077170 | 32.072 | 608 | 360 | 8 | 35 | 636 | 31 | 591 | 4.63e-110 | 343 |
| MS.gene80184.t1 | MTR_8g088730 | 33.225 | 614 | 343 | 10 | 35 | 636 | 31 | 589 | 8.33e-100 | 317 |
| MS.gene80184.t1 | MTR_2g006300 | 33.607 | 610 | 340 | 9 | 37 | 636 | 29 | 583 | 2.01e-96 | 308 |
| MS.gene80184.t1 | MTR_4g053270 | 30.744 | 605 | 362 | 10 | 36 | 634 | 34 | 587 | 3.01e-86 | 281 |
| MS.gene80184.t1 | MTR_7g060560 | 87.288 | 118 | 15 | 0 | 91 | 208 | 274 | 391 | 1.29e-63 | 215 |
| MS.gene80184.t1 | MTR_3g090510 | 81.967 | 122 | 20 | 1 | 87 | 208 | 275 | 394 | 1.68e-60 | 207 |
| MS.gene80184.t1 | MTR_5g014340 | 79.439 | 107 | 17 | 1 | 93 | 199 | 1 | 102 | 4.50e-43 | 155 |
| MS.gene80184.t1 | MTR_4g116770 | 40.704 | 199 | 101 | 6 | 1 | 193 | 1 | 188 | 4.63e-33 | 135 |
| MS.gene80184.t1 | MTR_0249s0060 | 85.294 | 68 | 10 | 0 | 93 | 160 | 1 | 68 | 4.82e-28 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80184.t1 | AT5G25100 | 83.256 | 645 | 98 | 3 | 1 | 636 | 1 | 644 | 0.0 | 1092 |
| MS.gene80184.t1 | AT5G10840 | 82.535 | 647 | 101 | 3 | 1 | 636 | 3 | 648 | 0.0 | 1091 |
| MS.gene80184.t1 | AT5G25100 | 82.362 | 652 | 98 | 4 | 1 | 636 | 1 | 651 | 0.0 | 1087 |
| MS.gene80184.t1 | AT2G24170 | 80.408 | 638 | 122 | 3 | 1 | 636 | 1 | 637 | 0.0 | 1048 |
| MS.gene80184.t1 | AT3G13772 | 76.136 | 616 | 145 | 2 | 22 | 636 | 27 | 641 | 0.0 | 991 |
| MS.gene80184.t1 | AT1G55130 | 73.899 | 636 | 162 | 3 | 4 | 636 | 3 | 637 | 0.0 | 979 |
| MS.gene80184.t1 | AT2G24170 | 76.629 | 445 | 101 | 3 | 1 | 443 | 1 | 444 | 0.0 | 710 |
| MS.gene80184.t1 | AT5G35160 | 44.678 | 667 | 304 | 13 | 13 | 636 | 14 | 658 | 0.0 | 540 |
| MS.gene80184.t1 | AT5G35160 | 44.678 | 667 | 304 | 13 | 13 | 636 | 14 | 658 | 0.0 | 540 |
| MS.gene80184.t1 | AT5G35160 | 44.678 | 667 | 304 | 13 | 13 | 636 | 14 | 658 | 0.0 | 540 |
| MS.gene80184.t1 | AT4G12650 | 44.359 | 647 | 314 | 12 | 22 | 636 | 20 | 652 | 1.55e-173 | 509 |
| MS.gene80184.t1 | AT5G35160 | 42.643 | 666 | 291 | 13 | 13 | 636 | 14 | 630 | 3.97e-169 | 497 |
| MS.gene80184.t1 | AT2G01970 | 33.224 | 608 | 350 | 8 | 36 | 636 | 34 | 592 | 6.38e-118 | 364 |
| MS.gene80184.t1 | AT5G37310 | 31.905 | 630 | 360 | 10 | 24 | 636 | 16 | 593 | 5.41e-110 | 343 |
| MS.gene80184.t1 | AT5G37310 | 31.905 | 630 | 360 | 10 | 24 | 636 | 16 | 593 | 5.41e-110 | 343 |
| MS.gene80184.t1 | AT1G14670 | 32.120 | 632 | 373 | 8 | 12 | 636 | 10 | 592 | 6.31e-110 | 343 |
| MS.gene80184.t1 | AT1G10950 | 34.272 | 604 | 332 | 11 | 43 | 636 | 41 | 589 | 5.36e-99 | 315 |
| MS.gene80184.t1 | AT1G08350 | 30.866 | 635 | 378 | 12 | 11 | 636 | 7 | 589 | 2.52e-98 | 313 |
| MS.gene80184.t1 | AT1G08350 | 30.866 | 635 | 378 | 12 | 11 | 636 | 7 | 589 | 2.52e-98 | 313 |
| MS.gene80184.t1 | AT1G08350 | 30.948 | 559 | 326 | 11 | 86 | 636 | 2 | 508 | 1.19e-87 | 282 |
| MS.gene80184.t1 | AT1G08350 | 30.017 | 583 | 338 | 12 | 11 | 584 | 7 | 528 | 2.55e-83 | 272 |
Find 145 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTCCACAAGATTTCTTTA+AGG | 0.160692 | 3.1:-83853909 | MS.gene80184:intron |
| TCTCTTCTTGGGCTTCTTCC+TGG | 0.162911 | 3.1:+83851532 | None:intergenic |
| ATGATTGTTCTCTTCCTTTC+GGG | 0.199038 | 3.1:-83851621 | MS.gene80184:CDS |
| AACACGAGTATGATGGTAAA+TGG | 0.258508 | 3.1:-83852179 | MS.gene80184:CDS |
| GACAGCCATGCTCTTGGTTT+GGG | 0.261532 | 3.1:-83851346 | MS.gene80184:CDS |
| CAATAGAGAACCAGTGAATT+TGG | 0.271157 | 3.1:+83851655 | None:intergenic |
| CACATATGATGTTGATTTCC+AGG | 0.271731 | 3.1:-83852052 | MS.gene80184:intron |
| AATGATTGTTCTCTTCCTTT+CGG | 0.275069 | 3.1:-83851622 | MS.gene80184:CDS |
| CTCTTCTTGGGCTTCTTCCT+GGG | 0.277059 | 3.1:+83851533 | None:intergenic |
| TTGTCCATGGGGATGTATTT+AGG | 0.282833 | 3.1:-83851497 | MS.gene80184:CDS |
| TATATTAAATGCTCTCATTT+GGG | 0.284478 | 3.1:-83851196 | MS.gene80184:CDS |
| TGACAGCCATGCTCTTGGTT+TGG | 0.284901 | 3.1:-83851347 | MS.gene80184:CDS |
| GCTTCCAACCAGTCTCTTCT+TGG | 0.285153 | 3.1:+83851520 | None:intergenic |
| GTCATCATTCATTAGCAAAT+AGG | 0.315280 | 3.1:+83851677 | None:intergenic |
| TTGGATTCTATGCATGCTTT+TGG | 0.316198 | 3.1:-83850615 | MS.gene80184:CDS |
| GCTTTGAGGTTAAGCCATTC+AGG | 0.317785 | 3.1:-83852318 | MS.gene80184:intron |
| TTATATTAAATGCTCTCATT+TGG | 0.322327 | 3.1:-83851197 | MS.gene80184:CDS |
| ACCATGATATTTGCTATCCT+TGG | 0.330022 | 3.1:-83851402 | MS.gene80184:CDS |
| TTCACAGGATTCTCAATTGC+AGG | 0.336074 | 3.1:+83851060 | None:intergenic |
| GCCTGCTCAGGGATCTGCCT+TGG | 0.337693 | 3.1:+83851024 | None:intergenic |
| CTTCCAACCAGTCTCTTCTT+GGG | 0.349041 | 3.1:+83851521 | None:intergenic |
| TTCATGTACCAGGCCTGCTC+AGG | 0.350610 | 3.1:+83851012 | None:intergenic |
| TCTTTATCCTCACCTCAATC+TGG | 0.357240 | 3.1:-83850927 | MS.gene80184:CDS |
| TGGCGGTCATACCTTACTTC+TGG | 0.362279 | 3.1:-83850778 | MS.gene80184:CDS |
| CCCACAACATTACACATTTG+TGG | 0.366682 | 3.1:+83852793 | None:intergenic |
| GCTTTCTCCTTCTACCTTCC+CGG | 0.371736 | 3.1:-83853935 | MS.gene80184:CDS |
| GGTTCCTCTCTCCTTCAAAC+CGG | 0.375085 | 3.1:-83851380 | MS.gene80184:CDS |
| AGGATAGTGCAGAAAATCTT+GGG | 0.390517 | 3.1:-83853125 | MS.gene80184:CDS |
| TTTGTGGTTACCGGTACTAT+TGG | 0.395492 | 3.1:-83850634 | MS.gene80184:CDS |
| CCTGCTCAGGGATCTGCCTT+GGG | 0.397639 | 3.1:+83851025 | None:intergenic |
| CTGTGTGTTTATGTTGGAAC+AGG | 0.398214 | 3.1:-83851453 | MS.gene80184:CDS |
| CATGTATCCAAAGTAAAATA+TGG | 0.398933 | 3.1:+83850678 | None:intergenic |
| CACAGCAAATCTGAGTTGTT+AGG | 0.400145 | 3.1:+83851471 | None:intergenic |
| AATAAAATGAGTACGGAAGC+TGG | 0.403462 | 3.1:+83853178 | None:intergenic |
| TGCTAGAATCGTGGGCTTTG+AGG | 0.404094 | 3.1:-83852332 | MS.gene80184:CDS |
| CCATGATATTTGCTATCCTT+GGG | 0.409788 | 3.1:-83851401 | MS.gene80184:CDS |
| CTTTAGTTGTTCCCATAAAA+CGG | 0.410146 | 3.1:-83852584 | MS.gene80184:CDS |
| TGTTCTCTTCCTTTCGGGCA+TGG | 0.411830 | 3.1:-83851616 | MS.gene80184:CDS |
| TCATCTGGAGCTGTGCCATT+TGG | 0.418785 | 3.1:-83851165 | MS.gene80184:CDS |
| CAGCTTTGTGATTTCAAGCT+TGG | 0.419934 | 3.1:+83850708 | None:intergenic |
| CAGGATAGTGCAGAAAATCT+TGG | 0.422003 | 3.1:-83853126 | MS.gene80184:CDS |
| AGTAATCCTCACTGCACAAC+TGG | 0.425366 | 3.1:+83850809 | None:intergenic |
| ATTTGGTACAATGTTTGCTC+TGG | 0.433667 | 3.1:-83851148 | MS.gene80184:CDS |
| GTTCCTCTCTCCTTCAAACC+GGG | 0.434696 | 3.1:-83851379 | MS.gene80184:CDS |
| ACAGCAAATCTGAGTTGTTA+GGG | 0.443885 | 3.1:+83851472 | None:intergenic |
| AGCGACGCCGGGAAGGTAGA+AGG | 0.446747 | 3.1:+83853928 | None:intergenic |
| GACTCAAAGGGCAGTATACC+GGG | 0.448506 | 3.1:-83852518 | MS.gene80184:CDS |
| GCTCATGACAGCCATGCTCT+TGG | 0.449410 | 3.1:-83851352 | MS.gene80184:CDS |
| CATTGAAAATTCACTATATG+TGG | 0.454070 | 3.1:-83853082 | MS.gene80184:intron |
| GGTTTCCATGTTGGACTCAA+AGG | 0.456598 | 3.1:-83852531 | MS.gene80184:CDS |
| GGCAGATCCCTGAGCAGGCC+TGG | 0.457305 | 3.1:-83851020 | MS.gene80184:CDS |
| CACATCTCTATGATACTTGA+CGG | 0.457417 | 3.1:+83852366 | None:intergenic |
| TCCCATAAAACGGAATGATC+AGG | 0.460700 | 3.1:-83852574 | MS.gene80184:CDS |
| AAAATGACAGAGACAATTGC+AGG | 0.461385 | 3.1:+83851222 | None:intergenic |
| TATCAGCTTGGTTTCCATGT+TGG | 0.466494 | 3.1:-83852540 | MS.gene80184:CDS |
| TTGCTCTCTTCAACTTCTTG+AGG | 0.468169 | 3.1:+83852087 | None:intergenic |
| AGAAGATCAATGACGAGTAT+CGG | 0.469743 | 3.1:-83852729 | MS.gene80184:CDS |
| GGACTCAAAGGGCAGTATAC+CGG | 0.471498 | 3.1:-83852519 | MS.gene80184:CDS |
| GAAGATCAATGACGAGTATC+GGG | 0.473535 | 3.1:-83852728 | MS.gene80184:CDS |
| AGAAGGAGAAAGCGGTGTGA+AGG | 0.477134 | 3.1:+83853945 | None:intergenic |
| GAAATCTTGTGGAGCGACGC+CGG | 0.479883 | 3.1:+83853916 | None:intergenic |
| GATTTGCTGTGTGTTTATGT+TGG | 0.480715 | 3.1:-83851459 | MS.gene80184:CDS |
| TCTCTCCTTCAAACCGGGGT+GGG | 0.482513 | 3.1:-83851374 | MS.gene80184:CDS |
| ATGAGCCCACCCCGGTTTGA+AGG | 0.482813 | 3.1:+83851369 | None:intergenic |
| GAGGGTCACATGTTGTCAAA+CGG | 0.488799 | 3.1:+83852142 | None:intergenic |
| GTTTCCATGTTGGACTCAAA+GGG | 0.490076 | 3.1:-83852530 | MS.gene80184:CDS |
| AGGGTCACATGTTGTCAAAC+GGG | 0.490682 | 3.1:+83852143 | None:intergenic |
| ACACGAGTATGATGGTAAAT+GGG | 0.490956 | 3.1:-83852178 | MS.gene80184:CDS |
| AGAATGTTGCATAAAGAAAG+AGG | 0.493377 | 3.1:+83850740 | None:intergenic |
| CCAATCAAAACAGAGAAGGC+TGG | 0.495505 | 3.1:+83850988 | None:intergenic |
| GGAAGTGAATAAAATGAGTA+CGG | 0.496741 | 3.1:+83853171 | None:intergenic |
| AAATCTTGTGGAGCGACGCC+GGG | 0.513081 | 3.1:+83853917 | None:intergenic |
| GAAGGCTGGGTTCATGTACC+AGG | 0.517535 | 3.1:+83851002 | None:intergenic |
| ACTGGTTGGAAGCTTGTCCA+TGG | 0.517914 | 3.1:-83851510 | MS.gene80184:CDS |
| GATTCTACCGTCTATCAGCT+TGG | 0.519977 | 3.1:-83852552 | MS.gene80184:CDS |
| CTCTCTCCTTCAAACCGGGG+TGG | 0.526606 | 3.1:-83851375 | MS.gene80184:CDS |
| AGAGCAAACATTGTACCAAA+TGG | 0.527636 | 3.1:+83851150 | None:intergenic |
| CCCAAGGCAGATCCCTGAGC+AGG | 0.531266 | 3.1:-83851025 | MS.gene80184:CDS |
| CCCAAGGATAGCAAATATCA+TGG | 0.533552 | 3.1:+83851401 | None:intergenic |
| AAGCCCAAGAAGAGACTGGT+TGG | 0.534521 | 3.1:-83851524 | MS.gene80184:CDS |
| CAATCAAAACAGAGAAGGCT+GGG | 0.541967 | 3.1:+83850989 | None:intergenic |
| GTATAACGAGCTTGAGACCC+AGG | 0.542211 | 3.1:-83851550 | MS.gene80184:CDS |
| ATATTAAATGCTCTCATTTG+GGG | 0.542556 | 3.1:-83851195 | MS.gene80184:CDS |
| GCCACAAATGTGTAATGTTG+TGG | 0.542830 | 3.1:-83852794 | MS.gene80184:CDS |
| CTGGTTGGAAGCTTGTCCAT+GGG | 0.544476 | 3.1:-83851509 | MS.gene80184:CDS |
| TGCATAGAATCCAATAGTAC+CGG | 0.547684 | 3.1:+83850624 | None:intergenic |
| GTGCGGAAGAACCAGAAGTA+AGG | 0.547713 | 3.1:+83850767 | None:intergenic |
| CGCTTGTACAAAATGTTCAA+AGG | 0.556072 | 3.1:-83851288 | MS.gene80184:CDS |
| TCAAGAAGTTGAAGAGAGCA+AGG | 0.556425 | 3.1:-83852085 | MS.gene80184:CDS |
| ACTGAATCTGCTAGAATCGT+GGG | 0.559429 | 3.1:-83852340 | MS.gene80184:CDS |
| ATAAAATGAGTACGGAAGCT+GGG | 0.562743 | 3.1:+83853179 | None:intergenic |
| ATGTGAAGTGGGCTTCAAGA+TGG | 0.563049 | 3.1:-83851704 | MS.gene80184:CDS |
| GGAACAAGGTTGCAGTCCTG+AGG | 0.563341 | 3.1:+83851244 | None:intergenic |
| CAAGCTTGAAATCACAAAGC+TGG | 0.563454 | 3.1:-83850707 | MS.gene80184:CDS |
| CGGTAAATGCCAAATGATTG+TGG | 0.563495 | 3.1:+83852386 | None:intergenic |
| TCATGTACCAGGCCTGCTCA+GGG | 0.566599 | 3.1:+83851013 | None:intergenic |
| TCAATGAAAACAGCTCCAAA+TGG | 0.567404 | 3.1:+83850955 | None:intergenic |
| AAACTGATTCAACCAGATTG+AGG | 0.568595 | 3.1:+83850915 | None:intergenic |
| AACTGAATCTGCTAGAATCG+TGG | 0.569950 | 3.1:-83852341 | MS.gene80184:CDS |
| GAAGAAGCCCAAGAAGAGAC+TGG | 0.572886 | 3.1:-83851528 | MS.gene80184:CDS |
| TTATGGGAACAACTAAAGGA+AGG | 0.576141 | 3.1:+83852589 | None:intergenic |
| TGAATGATGACCAAATTCAC+TGG | 0.577066 | 3.1:-83851665 | MS.gene80184:CDS |
| CCACAAATGTGTAATGTTGT+GGG | 0.579438 | 3.1:-83852793 | MS.gene80184:CDS |
| GTGAGGATTACTTGTGGTGG+TGG | 0.581791 | 3.1:-83850798 | MS.gene80184:CDS |
| AATCTTGGGGAAGTTCTTCG+TGG | 0.582702 | 3.1:-83853111 | MS.gene80184:CDS |
| AGTACCTTAAAGAAATCTTG+TGG | 0.582843 | 3.1:+83853905 | None:intergenic |
| CTTGTGGAGCGACGCCGGGA+AGG | 0.583502 | 3.1:+83853921 | None:intergenic |
| AGAGACAATTGCAGGGAACA+AGG | 0.584334 | 3.1:+83851230 | None:intergenic |
| CGTTATACTTTGCAATGTCA+CGG | 0.586779 | 3.1:+83851565 | None:intergenic |
| AGGATTACTTGTGGTGGTGG+CGG | 0.591655 | 3.1:-83850795 | MS.gene80184:CDS |
| ACAACTGTGTGCTTAGCATG+AGG | 0.593523 | 3.1:+83852123 | None:intergenic |
| GAACAAGGTTGCAGTCCTGA+GGG | 0.599617 | 3.1:+83851245 | None:intergenic |
| CAACTGTGTGCTTAGCATGA+GGG | 0.605991 | 3.1:+83852124 | None:intergenic |
| AGTGTTAAACACGAGTATGA+TGG | 0.607329 | 3.1:-83852186 | MS.gene80184:CDS |
| TGTGAAGTGGGCTTCAAGAT+GGG | 0.611136 | 3.1:-83851703 | MS.gene80184:CDS |
| AGTGGAAAAGAATTGCCCTC+AGG | 0.612537 | 3.1:-83851260 | MS.gene80184:CDS |
| GAAAACCCAAACCAAGAGCA+TGG | 0.614652 | 3.1:+83851341 | None:intergenic |
| TCATTGCCACCATGCCCGAA+AGG | 0.619231 | 3.1:+83851607 | None:intergenic |
| TTTCAGCACAAGTGACAACA+AGG | 0.619677 | 3.1:+83850854 | None:intergenic |
| TGCAGGAGAGTGATGTGAAG+TGG | 0.630793 | 3.1:-83851716 | MS.gene80184:intron |
| CTACTTCCAGTTGTGCAGTG+AGG | 0.631692 | 3.1:-83850815 | MS.gene80184:CDS |
| ATGGAAACCAAGCTGATAGA+CGG | 0.633306 | 3.1:+83852545 | None:intergenic |
| TGAAAACAAACAAAATCCCA+AGG | 0.637171 | 3.1:-83851041 | MS.gene80184:CDS |
| TTCCTCTCTCCTTCAAACCG+GGG | 0.639857 | 3.1:-83851378 | MS.gene80184:CDS |
| GCAGGAGAGTGATGTGAAGT+GGG | 0.642804 | 3.1:-83851715 | MS.gene80184:intron |
| TTGAAGGAGAGAGGAACCCA+AGG | 0.649137 | 3.1:+83851385 | None:intergenic |
| GGATAGTGCAGAAAATCTTG+GGG | 0.654034 | 3.1:-83853124 | MS.gene80184:CDS |
| TCTCTTCCTTTCGGGCATGG+TGG | 0.655153 | 3.1:-83851613 | MS.gene80184:CDS |
| GCAGTGAGGATTACTTGTGG+TGG | 0.656188 | 3.1:-83850801 | MS.gene80184:CDS |
| AAATGACAGAGACAATTGCA+GGG | 0.656961 | 3.1:+83851223 | None:intergenic |
| GGGGCCTAAATACATCCCCA+TGG | 0.661749 | 3.1:+83851493 | None:intergenic |
| CACCCCGGTTTGAAGGAGAG+AGG | 0.665310 | 3.1:+83851376 | None:intergenic |
| TGGCTGTCATGAGCCCACCC+CGG | 0.665939 | 3.1:+83851361 | None:intergenic |
| CAGCAAATCTGAGTTGTTAG+GGG | 0.667045 | 3.1:+83851473 | None:intergenic |
| ACTGCCCTTTGAGTCCAACA+TGG | 0.674258 | 3.1:+83852526 | None:intergenic |
| AGCAAATCTGAGTTGTTAGG+GGG | 0.675452 | 3.1:+83851474 | None:intergenic |
| AAATGTTCAAAGGATCAGAG+TGG | 0.690463 | 3.1:-83851278 | MS.gene80184:CDS |
| TGTGCAGTGAGGATTACTTG+TGG | 0.692738 | 3.1:-83850804 | MS.gene80184:CDS |
| ATAAAGAAAGAGGTATAGTG+CGG | 0.699094 | 3.1:+83850750 | None:intergenic |
| GATTCAACCAGATTGAGGTG+AGG | 0.702133 | 3.1:+83850920 | None:intergenic |
| TGGTTGGAAGCTTGTCCATG+GGG | 0.704860 | 3.1:-83851508 | MS.gene80184:CDS |
| CTGGAAGTAGCAGAGCACAA+TGG | 0.716782 | 3.1:+83850828 | None:intergenic |
| GGGAAGGTAGAAGGAGAAAG+CGG | 0.717499 | 3.1:+83853937 | None:intergenic |
| ACTCAAAGGGCAGTATACCG+GGG | 0.753482 | 3.1:-83852517 | MS.gene80184:intron |
| AACGAATGTACAGAGCAAGG+AGG | 0.788698 | 3.1:-83852422 | MS.gene80184:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAATTTTTTAGTTTCTA+TGG | - | chr3.1:83851702-83851721 | MS.gene80184:CDS | 10.0% |
| !! | ATAAATGTTAAAAAATTGCT+TGG | + | chr3.1:83851681-83851700 | None:intergenic | 15.0% |
| !! | CTTAATGAAATATATAGTTT+AGG | - | chr3.1:83851560-83851579 | MS.gene80184:CDS | 15.0% |
| !!! | ATTGATGAACATTTTTATAA+TGG | - | chr3.1:83852687-83852706 | MS.gene80184:intron | 15.0% |
| !!! | GTGTTTTTTTTTTTTTTTTG+TGG | - | chr3.1:83851241-83851260 | MS.gene80184:CDS | 15.0% |
| !! | GTCAATTGTTGAAAATAAAA+TGG | + | chr3.1:83852312-83852331 | None:intergenic | 20.0% |
| !! | GTTATTAACATACATGAATT+AGG | - | chr3.1:83852590-83852609 | MS.gene80184:CDS | 20.0% |
| !! | TAAAATATTTCTTTGTTGCA+GGG | - | chr3.1:83851322-83851341 | MS.gene80184:CDS | 20.0% |
| !! | TACTAATAATCGTTGATATA+CGG | - | chr3.1:83850890-83850909 | MS.gene80184:CDS | 20.0% |
| !! | TATATTAAATGCTCTCATTT+GGG | - | chr3.1:83853372-83853391 | MS.gene80184:intron | 20.0% |
| !! | TTAAAATATTTCTTTGTTGC+AGG | - | chr3.1:83851321-83851340 | MS.gene80184:CDS | 20.0% |
| !! | TTATATTAAATGCTCTCATT+TGG | - | chr3.1:83853371-83853390 | MS.gene80184:intron | 20.0% |
| !!! | TCATCTTTTTGTTTAGTATT+TGG | - | chr3.1:83852332-83852351 | MS.gene80184:CDS | 20.0% |
| !!! | TTTCAAGTTATATCTCATAA+TGG | - | chr3.1:83851925-83851944 | MS.gene80184:intron | 20.0% |
| !!! | TTTTTATCAGTTTCTAAGAA+AGG | - | chr3.1:83851533-83851552 | MS.gene80184:CDS | 20.0% |
| ! | AAGTAAGTAAGGAAACTTAT+TGG | + | chr3.1:83852120-83852139 | None:intergenic | 25.0% |
| ! | AGATTGAATCTTAATTTCAG+TGG | - | chr3.1:83850846-83850865 | MS.gene80184:CDS | 25.0% |
| ! | ATATTAAATGCTCTCATTTG+GGG | - | chr3.1:83853373-83853392 | MS.gene80184:intron | 25.0% |
| ! | CATGTATCCAAAGTAAAATA+TGG | + | chr3.1:83853893-83853912 | None:intergenic | 25.0% |
| ! | CATTGAAAATTCACTATATG+TGG | - | chr3.1:83851486-83851505 | MS.gene80184:CDS | 25.0% |
| ! | GATAGAAGAAAAAGAAAAGT+TGG | + | chr3.1:83852726-83852745 | None:intergenic | 25.0% |
| ! | GTTATTATTTGATTCCGATT+TGG | - | chr3.1:83851724-83851743 | MS.gene80184:intron | 25.0% |
| !! | AATCAGTTTTACTACATCTT+TGG | - | chr3.1:83853667-83853686 | MS.gene80184:intron | 25.0% |
| !! | ATCAGTTTTACTACATCTTT+GGG | - | chr3.1:83853668-83853687 | MS.gene80184:intron | 25.0% |
| !! | CATATAGTGAATTTTCAATG+CGG | + | chr3.1:83851486-83851505 | None:intergenic | 25.0% |
| !! | GTATTTTATCCACAATCATT+TGG | - | chr3.1:83852173-83852192 | MS.gene80184:CDS | 25.0% |
| !!! | TCTTTTTGTTTAGTATTTGG+TGG | - | chr3.1:83852335-83852354 | MS.gene80184:CDS | 25.0% |
| AAATACAGATCGAGAAGAAA+TGG | + | chr3.1:83850696-83850715 | None:intergenic | 30.0% | |
| AATGATTGTTCTCTTCCTTT+CGG | - | chr3.1:83852946-83852965 | MS.gene80184:intron | 30.0% | |
| AATGTTCATCAATGCAAAAG+AGG | + | chr3.1:83852680-83852699 | None:intergenic | 30.0% | |
| ACTGAAATATACCACCAAAT+CGG | + | chr3.1:83851741-83851760 | None:intergenic | 30.0% | |
| AGAAAACTCGCAGAAAATAA+CGG | + | chr3.1:83851883-83851902 | None:intergenic | 30.0% | |
| AGAATGTTGCATAAAGAAAG+AGG | + | chr3.1:83853831-83853850 | None:intergenic | 30.0% | |
| AGTACCTTAAAGAAATCTTG+TGG | + | chr3.1:83850666-83850685 | None:intergenic | 30.0% | |
| ATGTTCATCAATGCAAAAGA+GGG | + | chr3.1:83852679-83852698 | None:intergenic | 30.0% | |
| CACAAAAATAATGACCTGAA+TGG | + | chr3.1:83852267-83852286 | None:intergenic | 30.0% | |
| CTTTAGTTGTTCCCATAAAA+CGG | - | chr3.1:83851984-83852003 | MS.gene80184:intron | 30.0% | |
| GATAGCTGCATTACATTTAA+AGG | + | chr3.1:83851185-83851204 | None:intergenic | 30.0% | |
| GGAAGTGAATAAAATGAGTA+CGG | + | chr3.1:83851400-83851419 | None:intergenic | 30.0% | |
| GTATTGAATAACAATAGCCA+TGG | + | chr3.1:83852098-83852117 | None:intergenic | 30.0% | |
| GTCATCATTCATTAGCAAAT+AGG | + | chr3.1:83852894-83852913 | None:intergenic | 30.0% | |
| TAATAATCGTTGATATACGG+AGG | - | chr3.1:83850893-83850912 | MS.gene80184:CDS | 30.0% | |
| TCGTTCAGATAAAGTAAGTA+AGG | + | chr3.1:83852131-83852150 | None:intergenic | 30.0% | |
| TGAAAACAAACAAAATCCCA+AGG | - | chr3.1:83853527-83853546 | MS.gene80184:intron | 30.0% | |
| TTCACCATAACAAAAAAGAG+AGG | + | chr3.1:83852779-83852798 | None:intergenic | 30.0% | |
| ! | ATAAAGAAAGAGGTATAGTG+CGG | + | chr3.1:83853821-83853840 | None:intergenic | 30.0% |
| ! | TTCTTTTTCTTCTATCCAAC+TGG | - | chr3.1:83852730-83852749 | MS.gene80184:CDS | 30.0% |
| ! | TTTGAACTCCTTAGCATTTT+TGG | + | chr3.1:83851818-83851837 | None:intergenic | 30.0% |
| !! | AATAACCATTCTAAAGCACA+GGG | + | chr3.1:83852576-83852595 | None:intergenic | 30.0% |
| !! | ATTATTTGATTCCGATTTGG+TGG | - | chr3.1:83851727-83851746 | MS.gene80184:intron | 30.0% |
| !! | TAATAACCATTCTAAAGCAC+AGG | + | chr3.1:83852577-83852596 | None:intergenic | 30.0% |
| !!! | GAACAGGTGTTCAATTTTTT+GGG | - | chr3.1:83853131-83853150 | MS.gene80184:CDS | 30.0% |
| !!! | TCATCCTCTCTTTTTTGTTA+TGG | - | chr3.1:83852772-83852791 | MS.gene80184:CDS | 30.0% |
| AAAATGACAGAGACAATTGC+AGG | + | chr3.1:83853349-83853368 | None:intergenic | 35.0% | |
| AAATGACAGAGACAATTGCA+GGG | + | chr3.1:83853348-83853367 | None:intergenic | 35.0% | |
| AAATGTTCAAAGGATCAGAG+TGG | - | chr3.1:83853290-83853309 | MS.gene80184:intron | 35.0% | |
| AACACGAGTATGATGGTAAA+TGG | - | chr3.1:83852389-83852408 | MS.gene80184:CDS | 35.0% | |
| AATAAAATGAGTACGGAAGC+TGG | + | chr3.1:83851393-83851412 | None:intergenic | 35.0% | |
| AATGAAGAAGACAATCCAGT+TGG | + | chr3.1:83852748-83852767 | None:intergenic | 35.0% | |
| AATGTGGTTATCCAATTCAG+AGG | + | chr3.1:83851595-83851614 | None:intergenic | 35.0% | |
| ACAAAACAATATGCATACCC+CGG | + | chr3.1:83852071-83852090 | None:intergenic | 35.0% | |
| ACACGAGTATGATGGTAAAT+GGG | - | chr3.1:83852390-83852409 | MS.gene80184:CDS | 35.0% | |
| ACAGCAAATCTGAGTTGTTA+GGG | + | chr3.1:83853099-83853118 | None:intergenic | 35.0% | |
| ACGAATCAGATAATCTTCGA+TGG | - | chr3.1:83851083-83851102 | MS.gene80184:CDS | 35.0% | |
| ACTTGATGCCAAAAATGCTA+AGG | - | chr3.1:83851807-83851826 | MS.gene80184:intron | 35.0% | |
| AGAAGATCAATGACGAGTAT+CGG | - | chr3.1:83851839-83851858 | MS.gene80184:intron | 35.0% | |
| AGAGCAAACATTGTACCAAA+TGG | + | chr3.1:83853421-83853440 | None:intergenic | 35.0% | |
| AGGATAGTGCAGAAAATCTT+GGG | - | chr3.1:83851443-83851462 | MS.gene80184:CDS | 35.0% | |
| AGTGTTAAACACGAGTATGA+TGG | - | chr3.1:83852382-83852401 | MS.gene80184:CDS | 35.0% | |
| ATAAAATGAGTACGGAAGCT+GGG | + | chr3.1:83851392-83851411 | None:intergenic | 35.0% | |
| ATGATTGTTCTCTTCCTTTC+GGG | - | chr3.1:83852947-83852966 | MS.gene80184:intron | 35.0% | |
| ATTTGGTACAATGTTTGCTC+TGG | - | chr3.1:83853420-83853439 | MS.gene80184:intron | 35.0% | |
| CAATAGAGAACCAGTGAATT+TGG | + | chr3.1:83852916-83852935 | None:intergenic | 35.0% | |
| CACATCTCTATGATACTTGA+CGG | + | chr3.1:83852205-83852224 | None:intergenic | 35.0% | |
| CCACAAATGTGTAATGTTGT+GGG | - | chr3.1:83851775-83851794 | MS.gene80184:intron | 35.0% | |
| CGCTTGTACAAAATGTTCAA+AGG | - | chr3.1:83853280-83853299 | MS.gene80184:intron | 35.0% | |
| CGTTATACTTTGCAATGTCA+CGG | + | chr3.1:83853006-83853025 | None:intergenic | 35.0% | |
| GTGTAGTTAGGAATAGATGT+TGG | - | chr3.1:83851047-83851066 | MS.gene80184:CDS | 35.0% | |
| TAAGTTCCACATGTGTAGTT+AGG | - | chr3.1:83851035-83851054 | MS.gene80184:CDS | 35.0% | |
| TCAATGAAAACAGCTCCAAA+TGG | + | chr3.1:83853616-83853635 | None:intergenic | 35.0% | |
| TCTATTCCTAACTACACATG+TGG | + | chr3.1:83851044-83851063 | None:intergenic | 35.0% | |
| TGAATGATGACCAAATTCAC+TGG | - | chr3.1:83852903-83852922 | MS.gene80184:intron | 35.0% | |
| TGCATAGAATCCAATAGTAC+CGG | + | chr3.1:83853947-83853966 | None:intergenic | 35.0% | |
| TTATGGGAACAACTAAAGGA+AGG | + | chr3.1:83851982-83852001 | None:intergenic | 35.0% | |
| TTGTGGTCATAAACTTGATC+TGG | - | chr3.1:83851258-83851277 | MS.gene80184:CDS | 35.0% | |
| TTTAGCCAACTTTGATTGCA+CGG | - | chr3.1:83850975-83850994 | MS.gene80184:CDS | 35.0% | |
| ! | AAACTGATTCAACCAGATTG+AGG | + | chr3.1:83853656-83853675 | None:intergenic | 35.0% |
| ! | ACTATCCTGTATCTTTTTGG+GGG | + | chr3.1:83851431-83851450 | None:intergenic | 35.0% |
| ! | ATCCTGATCATTCCGTTTTA+TGG | + | chr3.1:83851999-83852018 | None:intergenic | 35.0% |
| ! | CACTATCCTGTATCTTTTTG+GGG | + | chr3.1:83851432-83851451 | None:intergenic | 35.0% |
| ! | CGTTTTATGGGAACAACTAA+AGG | + | chr3.1:83851986-83852005 | None:intergenic | 35.0% |
| ! | GCACTATCCTGTATCTTTTT+GGG | + | chr3.1:83851433-83851452 | None:intergenic | 35.0% |
| ! | GTGTCAGCCATATTTTACTT+TGG | - | chr3.1:83853883-83853902 | MS.gene80184:intron | 35.0% |
| ! | GTTTTCATGGGAATATTTGC+TGG | - | chr3.1:83853244-83853263 | MS.gene80184:intron | 35.0% |
| ! | GTTTTTGTGGGTAGCTATAT+TGG | - | chr3.1:83853475-83853494 | MS.gene80184:intron | 35.0% |
| ! | TCCTGATCATTCCGTTTTAT+GGG | + | chr3.1:83851998-83852017 | None:intergenic | 35.0% |
| ! | TCTAGAATCCTGCAAATGAT+AGG | + | chr3.1:83851956-83851975 | None:intergenic | 35.0% |
| ! | TGCACTATCCTGTATCTTTT+TGG | + | chr3.1:83851434-83851453 | None:intergenic | 35.0% |
| ! | TTGGATTCTATGCATGCTTT+TGG | - | chr3.1:83853953-83853972 | MS.gene80184:CDS | 35.0% |
| !! | ACCATGATATTTGCTATCCT+TGG | - | chr3.1:83853166-83853185 | MS.gene80184:CDS | 35.0% |
| !! | CACATATGATGTTGATTTCC+AGG | - | chr3.1:83852516-83852535 | MS.gene80184:intron | 35.0% |
| !! | CATATTGTTTTGTAGCACCA+TGG | - | chr3.1:83852078-83852097 | MS.gene80184:CDS | 35.0% |
| !! | CCATGATATTTGCTATCCTT+GGG | - | chr3.1:83853167-83853186 | MS.gene80184:CDS | 35.0% |
| !! | CTCTGGTCTTTTTATGGTTT+GGG | - | chr3.1:83853437-83853456 | MS.gene80184:intron | 35.0% |
| !! | GATTTGCTGTGTGTTTATGT+TGG | - | chr3.1:83853109-83853128 | MS.gene80184:CDS | 35.0% |
| !! | GGGATTTTGTTTGTTTTCAC+AGG | + | chr3.1:83853526-83853545 | None:intergenic | 35.0% |
| !! | TGTTTGCTCTGGTCTTTTTA+TGG | - | chr3.1:83853431-83853450 | MS.gene80184:intron | 35.0% |
| !! | TTATTATCCGCTTTTGCCTT+TGG | - | chr3.1:83852821-83852840 | MS.gene80184:intron | 35.0% |
| !!! | AGCTTCTTATGCGTTTTTTG+TGG | - | chr3.1:83853918-83853937 | MS.gene80184:CDS | 35.0% |
| !!! | GGAACAGGTGTTCAATTTTT+TGG | - | chr3.1:83853130-83853149 | MS.gene80184:CDS | 35.0% |
| !!! | TATGCGTTTTTTGTGGTTAC+CGG | - | chr3.1:83853925-83853944 | MS.gene80184:CDS | 35.0% |
| !!! | TCAGTTCCACTTGTTTTTGT+GGG | - | chr3.1:83853463-83853482 | MS.gene80184:intron | 35.0% |
| AACCACATTTGCAGAGTTGA+TGG | - | chr3.1:83851606-83851625 | MS.gene80184:CDS | 40.0% | |
| AACTGAATCTGCTAGAATCG+TGG | - | chr3.1:83852227-83852246 | MS.gene80184:intron | 40.0% | |
| AATGTAATGCAGCTATCTGC+TGG | - | chr3.1:83851188-83851207 | MS.gene80184:CDS | 40.0% | |
| ACAAACCGTGCAATCAAAGT+TGG | + | chr3.1:83850983-83851002 | None:intergenic | 40.0% | |
| ACTGAATCTGCTAGAATCGT+GGG | - | chr3.1:83852228-83852247 | MS.gene80184:intron | 40.0% | |
| AGCAAATCTGAGTTGTTAGG+GGG | + | chr3.1:83853097-83853116 | None:intergenic | 40.0% | |
| ATGGAAACCAAGCTGATAGA+CGG | + | chr3.1:83852026-83852045 | None:intergenic | 40.0% | |
| ATTGGGGGAATACTTCCATT+TGG | - | chr3.1:83853598-83853617 | MS.gene80184:intron | 40.0% | |
| ATTGGTGTGAGGGTTGAAAT+TGG | - | chr3.1:83852623-83852642 | MS.gene80184:intron | 40.0% | |
| CAAGCTTGAAATCACAAAGC+TGG | - | chr3.1:83853861-83853880 | MS.gene80184:intron | 40.0% | |
| CAATCAAAACAGAGAAGGCT+GGG | + | chr3.1:83853582-83853601 | None:intergenic | 40.0% | |
| CACAGCAAATCTGAGTTGTT+AGG | + | chr3.1:83853100-83853119 | None:intergenic | 40.0% | |
| CAGCAAATCTGAGTTGTTAG+GGG | + | chr3.1:83853098-83853117 | None:intergenic | 40.0% | |
| CAGGATAGTGCAGAAAATCT+TGG | - | chr3.1:83851442-83851461 | MS.gene80184:CDS | 40.0% | |
| CCCAAGGATAGCAAATATCA+TGG | + | chr3.1:83853170-83853189 | None:intergenic | 40.0% | |
| CCCACAACATTACACATTTG+TGG | + | chr3.1:83851778-83851797 | None:intergenic | 40.0% | |
| CGCTCCACAAGATTTCTTTA+AGG | - | chr3.1:83850659-83850678 | MS.gene80184:CDS | 40.0% | |
| CGGTAAATGCCAAATGATTG+TGG | + | chr3.1:83852185-83852204 | None:intergenic | 40.0% | |
| CTGTGTGTTTATGTTGGAAC+AGG | - | chr3.1:83853115-83853134 | MS.gene80184:CDS | 40.0% | |
| GAAGATCAATGACGAGTATC+GGG | - | chr3.1:83851840-83851859 | MS.gene80184:intron | 40.0% | |
| GCCACAAATGTGTAATGTTG+TGG | - | chr3.1:83851774-83851793 | MS.gene80184:intron | 40.0% | |
| GGAACAGTTAACCTCTGAAT+TGG | - | chr3.1:83851581-83851600 | MS.gene80184:CDS | 40.0% | |
| GGATAGTGCAGAAAATCTTG+GGG | - | chr3.1:83851444-83851463 | MS.gene80184:CDS | 40.0% | |
| GGATGATGAAGACCAAAAAG+AGG | + | chr3.1:83853696-83853715 | None:intergenic | 40.0% | |
| GTTTCCATGTTGGACTCAAA+GGG | - | chr3.1:83852038-83852057 | MS.gene80184:intron | 40.0% | |
| TAGCTACCCACAAAAACAAG+TGG | + | chr3.1:83853472-83853491 | None:intergenic | 40.0% | |
| TATCAGCTTGGTTTCCATGT+TGG | - | chr3.1:83852028-83852047 | MS.gene80184:intron | 40.0% | |
| TCAAGAAGTTGAAGAGAGCA+AGG | - | chr3.1:83852483-83852502 | MS.gene80184:intron | 40.0% | |
| TCCCATAAAACGGAATGATC+AGG | - | chr3.1:83851994-83852013 | MS.gene80184:intron | 40.0% | |
| TCTTTATCCTCACCTCAATC+TGG | - | chr3.1:83853641-83853660 | MS.gene80184:intron | 40.0% | |
| TGGGTAATCGCTCATTAACT+TGG | - | chr3.1:83851626-83851645 | MS.gene80184:CDS | 40.0% | |
| TTCACAGGATTCTCAATTGC+AGG | + | chr3.1:83853511-83853530 | None:intergenic | 40.0% | |
| TTGATATACGGAGGATTGTG+AGG | - | chr3.1:83850902-83850921 | MS.gene80184:CDS | 40.0% | |
| TTGCTCTCTTCAACTTCTTG+AGG | + | chr3.1:83852484-83852503 | None:intergenic | 40.0% | |
| TTGTCCATGGGGATGTATTT+AGG | - | chr3.1:83853071-83853090 | MS.gene80184:intron | 40.0% | |
| TTTCAGCACAAGTGACAACA+AGG | + | chr3.1:83853717-83853736 | None:intergenic | 40.0% | |
| TTTGTGGTTACCGGTACTAT+TGG | - | chr3.1:83853934-83853953 | MS.gene80184:CDS | 40.0% | |
| ! | ACCACATTTGCAGAGTTGAT+GGG | - | chr3.1:83851607-83851626 | MS.gene80184:CDS | 40.0% |
| ! | ATTTGGGGCCAAAAATCATC+TGG | - | chr3.1:83853388-83853407 | MS.gene80184:intron | 40.0% |
| ! | CAGCTTTGTGATTTCAAGCT+TGG | + | chr3.1:83853863-83853882 | None:intergenic | 40.0% |
| ! | CATACATGAATTAGGCACTG+AGG | - | chr3.1:83852598-83852617 | MS.gene80184:CDS | 40.0% |
| ! | GTTGAAATTGGTCTGTCGTT+TGG | - | chr3.1:83852635-83852654 | MS.gene80184:intron | 40.0% |
| !! | CATCTTTGGGTTCCTCTTTT+TGG | - | chr3.1:83853681-83853700 | MS.gene80184:intron | 40.0% |
| !! | CTATACCCTGTGCTTTAGAA+TGG | - | chr3.1:83852568-83852587 | MS.gene80184:CDS | 40.0% |
| !! | GAATTAGGCACTGAGGTAAT+TGG | - | chr3.1:83852605-83852624 | MS.gene80184:intron | 40.0% |
| !! | GCTCTGGTCTTTTTATGGTT+TGG | - | chr3.1:83853436-83853455 | MS.gene80184:intron | 40.0% |
| !! | TGGTTTTGCCTATCATTTGC+AGG | - | chr3.1:83851945-83851964 | MS.gene80184:intron | 40.0% |
| !!! | AGCCTTCTCTGTTTTGATTG+GGG | - | chr3.1:83853582-83853601 | MS.gene80184:intron | 40.0% |
| !!! | ATGCATGCTTTTGGTTCACA+AGG | - | chr3.1:83853962-83853981 | MS.gene80184:CDS | 40.0% |
| !!! | CAGCCTTCTCTGTTTTGATT+GGG | - | chr3.1:83853581-83853600 | MS.gene80184:intron | 40.0% |
| !!! | CTCAGTTCCACTTGTTTTTG+TGG | - | chr3.1:83853462-83853481 | MS.gene80184:intron | 40.0% |
| !!! | CTCTTGGTTTGGGTTTTCAT+GGG | - | chr3.1:83853232-83853251 | MS.gene80184:intron | 40.0% |
| AACGAATGTACAGAGCAAGG+AGG | - | chr3.1:83852146-83852165 | MS.gene80184:CDS | 45.0% | |
| AATCTTGGGGAAGTTCTTCG+TGG | - | chr3.1:83851457-83851476 | MS.gene80184:CDS | 45.0% | |
| ACAACTGTGTGCTTAGCATG+AGG | + | chr3.1:83852448-83852467 | None:intergenic | 45.0% | |
| ACCCATCAACTCTGCAAATG+TGG | + | chr3.1:83851611-83851630 | None:intergenic | 45.0% | |
| AGAGACAATTGCAGGGAACA+AGG | + | chr3.1:83853341-83853360 | None:intergenic | 45.0% | |
| AGGGTCACATGTTGTCAAAC+GGG | + | chr3.1:83852428-83852447 | None:intergenic | 45.0% | |
| AGTAATCCTCACTGCACAAC+TGG | + | chr3.1:83853762-83853781 | None:intergenic | 45.0% | |
| AGTGGAAAAGAATTGCCCTC+AGG | - | chr3.1:83853308-83853327 | MS.gene80184:intron | 45.0% | |
| ATAGCAGCCAAAGGCAAAAG+CGG | + | chr3.1:83852831-83852850 | None:intergenic | 45.0% | |
| CAACTGTGTGCTTAGCATGA+GGG | + | chr3.1:83852447-83852466 | None:intergenic | 45.0% | |
| CACTGAGGTAATTGGTGTGA+GGG | - | chr3.1:83852613-83852632 | MS.gene80184:intron | 45.0% | |
| CCAATCAAAACAGAGAAGGC+TGG | + | chr3.1:83853583-83853602 | None:intergenic | 45.0% | |
| CTGAACGAATGTACAGAGCA+AGG | - | chr3.1:83852143-83852162 | MS.gene80184:CDS | 45.0% | |
| CTTCCAACCAGTCTCTTCTT+GGG | + | chr3.1:83853050-83853069 | None:intergenic | 45.0% | |
| GAAAACCCAAACCAAGAGCA+TGG | + | chr3.1:83853230-83853249 | None:intergenic | 45.0% | |
| GAGGGTCACATGTTGTCAAA+CGG | + | chr3.1:83852429-83852448 | None:intergenic | 45.0% | |
| GATTCAACCAGATTGAGGTG+AGG | + | chr3.1:83853651-83853670 | None:intergenic | 45.0% | |
| GATTCTACCGTCTATCAGCT+TGG | - | chr3.1:83852016-83852035 | MS.gene80184:intron | 45.0% | |
| GGTTTCCATGTTGGACTCAA+AGG | - | chr3.1:83852037-83852056 | MS.gene80184:intron | 45.0% | |
| TATCAGCTCATAAGCTCACC+TGG | + | chr3.1:83852537-83852556 | None:intergenic | 45.0% | |
| TCCCCCAATCAAAACAGAGA+AGG | + | chr3.1:83853587-83853606 | None:intergenic | 45.0% | |
| TGTGCAGTGAGGATTACTTG+TGG | - | chr3.1:83853764-83853783 | MS.gene80184:intron | 45.0% | |
| ! | ATGTGAAGTGGGCTTCAAGA+TGG | - | chr3.1:83852864-83852883 | MS.gene80184:intron | 45.0% |
| ! | GAAATTGGTCTGTCGTTTGG+CGG | - | chr3.1:83852638-83852657 | MS.gene80184:intron | 45.0% |
| ! | GCACAGCTCCAGATGATTTT+TGG | + | chr3.1:83853399-83853418 | None:intergenic | 45.0% |
| ! | TGTGAAGTGGGCTTCAAGAT+GGG | - | chr3.1:83852865-83852884 | MS.gene80184:intron | 45.0% |
| !! | ATCTTTTTGGGGGCAGGATA+AGG | + | chr3.1:83851421-83851440 | None:intergenic | 45.0% |
| !! | GCTTTGAGGTTAAGCCATTC+AGG | - | chr3.1:83852250-83852269 | MS.gene80184:intron | 45.0% |
| !!! | CCAGCCTTCTCTGTTTTGAT+TGG | - | chr3.1:83853580-83853599 | MS.gene80184:intron | 45.0% |
| !!! | GCCTTCTCTGTTTTGATTGG+GGG | - | chr3.1:83853583-83853602 | MS.gene80184:intron | 45.0% |
| !!! | GCTCTTGGTTTGGGTTTTCA+TGG | - | chr3.1:83853231-83853250 | MS.gene80184:intron | 45.0% |
| AAGCCCAAGAAGAGACTGGT+TGG | - | chr3.1:83853044-83853063 | MS.gene80184:intron | 50.0% | |
| ACTCAAAGGGCAGTATACCG+GGG | - | chr3.1:83852051-83852070 | MS.gene80184:intron | 50.0% | |
| ACTGCCCTTTGAGTCCAACA+TGG | + | chr3.1:83852045-83852064 | None:intergenic | 50.0% | |
| ACTGGTTGGAAGCTTGTCCA+TGG | - | chr3.1:83853058-83853077 | MS.gene80184:intron | 50.0% | |
| AGAAGGAGAAAGCGGTGTGA+AGG | + | chr3.1:83850626-83850645 | None:intergenic | 50.0% | |
| CTACTTCCAGTTGTGCAGTG+AGG | - | chr3.1:83853753-83853772 | MS.gene80184:intron | 50.0% | |
| CTCTTCTTGGGCTTCTTCCT+GGG | + | chr3.1:83853038-83853057 | None:intergenic | 50.0% | |
| CTGGAAGTAGCAGAGCACAA+TGG | + | chr3.1:83853743-83853762 | None:intergenic | 50.0% | |
| CTGGTTGGAAGCTTGTCCAT+GGG | - | chr3.1:83853059-83853078 | MS.gene80184:intron | 50.0% | |
| GAACAAGGTTGCAGTCCTGA+GGG | + | chr3.1:83853326-83853345 | None:intergenic | 50.0% | |
| GAAGAAGCCCAAGAAGAGAC+TGG | - | chr3.1:83853040-83853059 | MS.gene80184:intron | 50.0% | |
| GACAGCCATGCTCTTGGTTT+GGG | - | chr3.1:83853222-83853241 | MS.gene80184:CDS | 50.0% | |
| GACTCAAAGGGCAGTATACC+GGG | - | chr3.1:83852050-83852069 | MS.gene80184:intron | 50.0% | |
| GCACTGAGGTAATTGGTGTG+AGG | - | chr3.1:83852612-83852631 | MS.gene80184:intron | 50.0% | |
| GCAGGAGAGTGATGTGAAGT+GGG | - | chr3.1:83852853-83852872 | MS.gene80184:intron | 50.0% | |
| GCAGTGAGGATTACTTGTGG+TGG | - | chr3.1:83853767-83853786 | MS.gene80184:intron | 50.0% | |
| GCTTCCAACCAGTCTCTTCT+TGG | + | chr3.1:83853051-83853070 | None:intergenic | 50.0% | |
| GCTTTCTCCTTCTACCTTCC+CGG | - | chr3.1:83850633-83850652 | MS.gene80184:CDS | 50.0% | |
| GGACTCAAAGGGCAGTATAC+CGG | - | chr3.1:83852049-83852068 | MS.gene80184:intron | 50.0% | |
| GGGAAGGTAGAAGGAGAAAG+CGG | + | chr3.1:83850634-83850653 | None:intergenic | 50.0% | |
| GGTTCCTCTCTCCTTCAAAC+CGG | - | chr3.1:83853188-83853207 | MS.gene80184:CDS | 50.0% | |
| GTATAACGAGCTTGAGACCC+AGG | - | chr3.1:83853018-83853037 | MS.gene80184:intron | 50.0% | |
| GTGAGGATTACTTGTGGTGG+TGG | - | chr3.1:83853770-83853789 | MS.gene80184:intron | 50.0% | |
| GTGCGGAAGAACCAGAAGTA+AGG | + | chr3.1:83853804-83853823 | None:intergenic | 50.0% | |
| GTTCCTCTCTCCTTCAAACC+GGG | - | chr3.1:83853189-83853208 | MS.gene80184:CDS | 50.0% | |
| TCCTGCCCCCAAAAAGATAC+AGG | - | chr3.1:83851423-83851442 | MS.gene80184:CDS | 50.0% | |
| TCTCTTCTTGGGCTTCTTCC+TGG | + | chr3.1:83853039-83853058 | None:intergenic | 50.0% | |
| TGACAGCCATGCTCTTGGTT+TGG | - | chr3.1:83853221-83853240 | MS.gene80184:CDS | 50.0% | |
| TGCAGGAGAGTGATGTGAAG+TGG | - | chr3.1:83852852-83852871 | MS.gene80184:intron | 50.0% | |
| TGCTAGAATCGTGGGCTTTG+AGG | - | chr3.1:83852236-83852255 | MS.gene80184:intron | 50.0% | |
| TGGCGGTCATACCTTACTTC+TGG | - | chr3.1:83853790-83853809 | MS.gene80184:intron | 50.0% | |
| TGGTTGGAAGCTTGTCCATG+GGG | - | chr3.1:83853060-83853079 | MS.gene80184:intron | 50.0% | |
| TGTTCTCTTCCTTTCGGGCA+TGG | - | chr3.1:83852952-83852971 | MS.gene80184:intron | 50.0% | |
| TTCCTCTCTCCTTCAAACCG+GGG | - | chr3.1:83853190-83853209 | MS.gene80184:CDS | 50.0% | |
| TTGAAGGAGAGAGGAACCCA+AGG | + | chr3.1:83853186-83853205 | None:intergenic | 50.0% | |
| ! | TCATCTGGAGCTGTGCCATT+TGG | - | chr3.1:83853403-83853422 | MS.gene80184:intron | 50.0% |
| !! | AGGATTACTTGTGGTGGTGG+CGG | - | chr3.1:83853773-83853792 | MS.gene80184:intron | 50.0% |
| !! | TCCTGTATCTTTTTGGGGGC+AGG | + | chr3.1:83851427-83851446 | None:intergenic | 50.0% |
| AAATCTTGTGGAGCGACGCC+GGG | + | chr3.1:83850654-83850673 | None:intergenic | 55.0% | |
| CTCCTGCAGATAGCAGCCAA+AGG | + | chr3.1:83852840-83852859 | None:intergenic | 55.0% | |
| GAAATCTTGTGGAGCGACGC+CGG | + | chr3.1:83850655-83850674 | None:intergenic | 55.0% | |
| GAAGGCTGGGTTCATGTACC+AGG | + | chr3.1:83853569-83853588 | None:intergenic | 55.0% | |
| GCTCATGACAGCCATGCTCT+TGG | - | chr3.1:83853216-83853235 | MS.gene80184:CDS | 55.0% | |
| GGAACAAGGTTGCAGTCCTG+AGG | + | chr3.1:83853327-83853346 | None:intergenic | 55.0% | |
| GGGGCCTAAATACATCCCCA+TGG | + | chr3.1:83853078-83853097 | None:intergenic | 55.0% | |
| TCATGTACCAGGCCTGCTCA+GGG | + | chr3.1:83853558-83853577 | None:intergenic | 55.0% | |
| TCATTGCCACCATGCCCGAA+AGG | + | chr3.1:83852964-83852983 | None:intergenic | 55.0% | |
| TCTCTCCTTCAAACCGGGGT+GGG | - | chr3.1:83853194-83853213 | MS.gene80184:CDS | 55.0% | |
| TCTCTTCCTTTCGGGCATGG+TGG | - | chr3.1:83852955-83852974 | MS.gene80184:intron | 55.0% | |
| TGCCTTTGGCTGCTATCTGC+AGG | - | chr3.1:83852835-83852854 | MS.gene80184:intron | 55.0% | |
| TTCATGTACCAGGCCTGCTC+AGG | + | chr3.1:83853559-83853578 | None:intergenic | 55.0% | |
| CCTGCTCAGGGATCTGCCTT+GGG | + | chr3.1:83853546-83853565 | None:intergenic | 60.0% | |
| CTCTCTCCTTCAAACCGGGG+TGG | - | chr3.1:83853193-83853212 | MS.gene80184:CDS | 60.0% | |
| ! | ATGAGCCCACCCCGGTTTGA+AGG | + | chr3.1:83853202-83853221 | None:intergenic | 60.0% |
| ! | CACCCCGGTTTGAAGGAGAG+AGG | + | chr3.1:83853195-83853214 | None:intergenic | 60.0% |
| AGCGACGCCGGGAAGGTAGA+AGG | + | chr3.1:83850643-83850662 | None:intergenic | 65.0% | |
| CCCAAGGCAGATCCCTGAGC+AGG | - | chr3.1:83853543-83853562 | MS.gene80184:intron | 65.0% | |
| GCCTGCTCAGGGATCTGCCT+TGG | + | chr3.1:83853547-83853566 | None:intergenic | 65.0% | |
| TGGCTGTCATGAGCCCACCC+CGG | + | chr3.1:83853210-83853229 | None:intergenic | 65.0% | |
| CTTGTGGAGCGACGCCGGGA+AGG | + | chr3.1:83850650-83850669 | None:intergenic | 70.0% | |
| GGCAGATCCCTGAGCAGGCC+TGG | - | chr3.1:83853548-83853567 | MS.gene80184:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 83850576 | 83854014 | 83850576 | ID=MS.gene80184 |
| chr3.1 | mRNA | 83850576 | 83854014 | 83850576 | ID=MS.gene80184.t1;Parent=MS.gene80184 |
| chr3.1 | exon | 83853910 | 83854014 | 83853910 | ID=MS.gene80184.t1.exon1;Parent=MS.gene80184.t1 |
| chr3.1 | CDS | 83853910 | 83854014 | 83853910 | ID=cds.MS.gene80184.t1;Parent=MS.gene80184.t1 |
| chr3.1 | exon | 83853083 | 83853247 | 83853083 | ID=MS.gene80184.t1.exon2;Parent=MS.gene80184.t1 |
| chr3.1 | CDS | 83853083 | 83853247 | 83853083 | ID=cds.MS.gene80184.t1;Parent=MS.gene80184.t1 |
| chr3.1 | exon | 83852721 | 83852830 | 83852721 | ID=MS.gene80184.t1.exon3;Parent=MS.gene80184.t1 |
| chr3.1 | CDS | 83852721 | 83852830 | 83852721 | ID=cds.MS.gene80184.t1;Parent=MS.gene80184.t1 |
| chr3.1 | exon | 83852518 | 83852623 | 83852518 | ID=MS.gene80184.t1.exon4;Parent=MS.gene80184.t1 |
| chr3.1 | CDS | 83852518 | 83852623 | 83852518 | ID=cds.MS.gene80184.t1;Parent=MS.gene80184.t1 |
| chr3.1 | exon | 83852319 | 83852431 | 83852319 | ID=MS.gene80184.t1.exon5;Parent=MS.gene80184.t1 |
| chr3.1 | CDS | 83852319 | 83852431 | 83852319 | ID=cds.MS.gene80184.t1;Parent=MS.gene80184.t1 |
| chr3.1 | exon | 83852053 | 83852206 | 83852053 | ID=MS.gene80184.t1.exon6;Parent=MS.gene80184.t1 |
| chr3.1 | CDS | 83852053 | 83852206 | 83852053 | ID=cds.MS.gene80184.t1;Parent=MS.gene80184.t1 |
| chr3.1 | exon | 83850576 | 83851733 | 83850576 | ID=MS.gene80184.t1.exon7;Parent=MS.gene80184.t1 |
| chr3.1 | CDS | 83850576 | 83851733 | 83850576 | ID=cds.MS.gene80184.t1;Parent=MS.gene80184.t1 |
| Gene Sequence |
| Protein sequence |
