Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058486.t1 | XP_003588860.1 | 99.1 | 637 | 5 | 1 | 1 | 636 | 1 | 637 | 0.00E+00 | 1249.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058486.t1 | F4KIB2 | 85.0 | 628 | 92 | 1 | 11 | 636 | 21 | 648 | 0.0e+00 | 1084.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058486.t1 | G7I879 | 99.1 | 637 | 5 | 1 | 1 | 636 | 1 | 637 | 0.0e+00 | 1249.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058486 | MS.gene062887 | 0.818304 | 2.10E-52 | -1.69E-46 |
| MS.gene058486 | MS.gene062888 | 0.81035 | 1.20E-50 | -1.69E-46 |
| MS.gene058486 | MS.gene063166 | 0.824113 | 9.62E-54 | -1.69E-46 |
| MS.gene058486 | MS.gene33117 | 0.970663 | 5.83E-132 | -1.69E-46 |
| MS.gene058486 | MS.gene44189 | 0.808823 | 2.56E-50 | -1.69E-46 |
| MS.gene058486 | MS.gene50077 | 0.822869 | 1.88E-53 | -1.69E-46 |
| MS.gene058486 | MS.gene97558 | 0.806477 | 8.07E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051485 | MS.gene058486 | PPI |
| MS.gene058486 | MS.gene016086 | PPI |
| MS.gene058486 | MS.gene36990 | PPI |
| MS.gene058486 | MS.gene42664 | PPI |
| MS.gene058486 | MS.gene57710 | PPI |
| MS.gene058486 | MS.gene80181 | PPI |
| MS.gene58761 | MS.gene058486 | PPI |
| MS.gene36542 | MS.gene058486 | PPI |
| MS.gene058486 | MS.gene36992 | PPI |
| MS.gene014910 | MS.gene058486 | PPI |
| MS.gene058486 | MS.gene020254 | PPI |
| MS.gene011190 | MS.gene058486 | PPI |
| MS.gene058486 | MS.gene041418 | PPI |
| MS.gene80184 | MS.gene058486 | PPI |
| MS.gene32702 | MS.gene058486 | PPI |
| MS.gene33117 | MS.gene058486 | PPI |
| MS.gene058486 | MS.gene036639 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058486.t1 | MTR_1g014080 | 99.058 | 637 | 5 | 1 | 1 | 636 | 1 | 637 | 0.0 | 1296 |
| MS.gene058486.t1 | MTR_3g105950 | 91.086 | 617 | 54 | 1 | 21 | 636 | 20 | 636 | 0.0 | 1149 |
| MS.gene058486.t1 | MTR_8g016270 | 74.763 | 634 | 157 | 2 | 4 | 636 | 17 | 648 | 0.0 | 993 |
| MS.gene058486.t1 | MTR_5g098730 | 45.510 | 657 | 301 | 14 | 18 | 636 | 28 | 665 | 0.0 | 536 |
| MS.gene058486.t1 | MTR_3g082140 | 44.564 | 653 | 317 | 12 | 16 | 636 | 20 | 659 | 0.0 | 530 |
| MS.gene058486.t1 | MTR_0204s0010 | 47.598 | 458 | 216 | 7 | 192 | 636 | 2 | 448 | 4.84e-148 | 436 |
| MS.gene058486.t1 | MTR_5g077170 | 32.626 | 613 | 361 | 8 | 30 | 636 | 25 | 591 | 2.39e-114 | 354 |
| MS.gene058486.t1 | MTR_6g074910 | 31.811 | 613 | 364 | 8 | 30 | 636 | 24 | 588 | 2.57e-111 | 347 |
| MS.gene058486.t1 | MTR_8g088730 | 33.118 | 619 | 348 | 9 | 30 | 636 | 25 | 589 | 3.66e-105 | 330 |
| MS.gene058486.t1 | MTR_2g006300 | 33.549 | 617 | 346 | 9 | 30 | 636 | 21 | 583 | 1.75e-102 | 323 |
| MS.gene058486.t1 | MTR_4g053270 | 30.148 | 607 | 368 | 9 | 34 | 634 | 31 | 587 | 1.52e-90 | 292 |
| MS.gene058486.t1 | MTR_7g060560 | 94.068 | 118 | 7 | 0 | 92 | 209 | 274 | 391 | 4.70e-71 | 235 |
| MS.gene058486.t1 | MTR_3g090510 | 93.750 | 112 | 7 | 0 | 98 | 209 | 283 | 394 | 8.51e-68 | 226 |
| MS.gene058486.t1 | MTR_5g014340 | 86.916 | 107 | 9 | 1 | 94 | 200 | 1 | 102 | 7.71e-49 | 171 |
| MS.gene058486.t1 | MTR_4g116770 | 40.741 | 189 | 100 | 5 | 9 | 194 | 9 | 188 | 4.47e-34 | 138 |
| MS.gene058486.t1 | MTR_0249s0060 | 89.706 | 68 | 7 | 0 | 94 | 161 | 1 | 68 | 4.44e-30 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058486.t1 | AT5G10840 | 85.032 | 628 | 92 | 1 | 11 | 636 | 21 | 648 | 0.0 | 1101 |
| MS.gene058486.t1 | AT5G25100 | 83.968 | 630 | 97 | 1 | 11 | 636 | 15 | 644 | 0.0 | 1090 |
| MS.gene058486.t1 | AT5G25100 | 83.046 | 637 | 97 | 2 | 11 | 636 | 15 | 651 | 0.0 | 1083 |
| MS.gene058486.t1 | AT2G24170 | 80.220 | 637 | 125 | 1 | 1 | 636 | 1 | 637 | 0.0 | 1057 |
| MS.gene058486.t1 | AT3G13772 | 76.786 | 616 | 140 | 3 | 23 | 636 | 27 | 641 | 0.0 | 995 |
| MS.gene058486.t1 | AT1G55130 | 73.354 | 638 | 167 | 3 | 1 | 636 | 1 | 637 | 0.0 | 977 |
| MS.gene058486.t1 | AT2G24170 | 75.831 | 451 | 102 | 3 | 1 | 447 | 1 | 448 | 0.0 | 717 |
| MS.gene058486.t1 | AT5G35160 | 45.263 | 665 | 302 | 13 | 14 | 636 | 14 | 658 | 0.0 | 551 |
| MS.gene058486.t1 | AT5G35160 | 45.263 | 665 | 302 | 13 | 14 | 636 | 14 | 658 | 0.0 | 551 |
| MS.gene058486.t1 | AT5G35160 | 45.263 | 665 | 302 | 13 | 14 | 636 | 14 | 658 | 0.0 | 551 |
| MS.gene058486.t1 | AT4G12650 | 44.833 | 658 | 315 | 14 | 13 | 636 | 9 | 652 | 1.48e-176 | 516 |
| MS.gene058486.t1 | AT5G35160 | 42.922 | 664 | 291 | 13 | 14 | 636 | 14 | 630 | 3.47e-172 | 504 |
| MS.gene058486.t1 | AT2G01970 | 33.701 | 635 | 360 | 10 | 14 | 636 | 7 | 592 | 3.22e-123 | 377 |
| MS.gene058486.t1 | AT1G14670 | 33.490 | 639 | 362 | 10 | 10 | 636 | 5 | 592 | 8.29e-115 | 356 |
| MS.gene058486.t1 | AT5G37310 | 32.238 | 639 | 363 | 9 | 13 | 636 | 10 | 593 | 5.91e-112 | 348 |
| MS.gene058486.t1 | AT5G37310 | 32.238 | 639 | 363 | 9 | 13 | 636 | 10 | 593 | 5.91e-112 | 348 |
| MS.gene058486.t1 | AT1G10950 | 33.712 | 617 | 345 | 9 | 30 | 636 | 27 | 589 | 1.02e-103 | 327 |
| MS.gene058486.t1 | AT1G08350 | 31.107 | 614 | 367 | 11 | 30 | 636 | 25 | 589 | 1.95e-100 | 318 |
| MS.gene058486.t1 | AT1G08350 | 31.107 | 614 | 367 | 11 | 30 | 636 | 25 | 589 | 1.95e-100 | 318 |
| MS.gene058486.t1 | AT1G08350 | 30.755 | 556 | 330 | 10 | 87 | 636 | 2 | 508 | 1.36e-86 | 280 |
| MS.gene058486.t1 | AT1G08350 | 30.427 | 562 | 326 | 11 | 30 | 584 | 25 | 528 | 3.41e-86 | 280 |
Find 138 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTTTGGCTTCCTCTTTC+TGG | 0.064189 | 1.4:+7761787 | MS.gene058486:CDS |
| ATCCTGATCCACACGCTTTA+TGG | 0.119105 | 1.4:-7760166 | None:intergenic |
| TCTCTTCTTGTGCTTCTTCT+TGG | 0.188485 | 1.4:-7761142 | None:intergenic |
| TTCATGTACCACGCTTGTTC+AGG | 0.250510 | 1.4:-7761662 | None:intergenic |
| TTGTATTGAATGGTCTGATA+TGG | 0.253856 | 1.4:+7761477 | MS.gene058486:CDS |
| CAATTGAGAACCAGTGAATT+TGG | 0.264042 | 1.4:-7761019 | None:intergenic |
| CTCTTCTTGTGCTTCTTCTT+GGG | 0.281012 | 1.4:-7761141 | None:intergenic |
| ACCATTCAATACAAAGAAAA+TGG | 0.292510 | 1.4:-7761468 | None:intergenic |
| GCTTTGAGGTTAAGCCATTC+AGG | 0.304144 | 1.4:+7760422 | MS.gene058486:CDS |
| AACCTCAAAGCCCACTATTC+TGG | 0.312174 | 1.4:-7760410 | None:intergenic |
| AACATGAATATGAAGGGAAA+TGG | 0.333966 | 1.4:+7760549 | MS.gene058486:CDS |
| TTGGTGGCTATGTTGGATTC+AGG | 0.340881 | 1.4:+7761588 | MS.gene058486:CDS |
| TCTTCATTCTCACCTCAATC+TGG | 0.353616 | 1.4:+7761747 | MS.gene058486:CDS |
| CACATATGATGTTGAATTCC+TGG | 0.357055 | 1.4:+7760673 | MS.gene058486:CDS |
| CTTGTTCAGGGATCTGCCTT+GGG | 0.361865 | 1.4:-7761649 | None:intergenic |
| TTCAACTTCTTGAGGAGTAT+TGG | 0.372089 | 1.4:-7760630 | None:intergenic |
| CACACAACATTGCACATTTG+TGG | 0.372808 | 1.4:-7759944 | None:intergenic |
| TTGTGTGTTTATGTTGGTAC+TGG | 0.374408 | 1.4:+7761221 | MS.gene058486:CDS |
| ACAATGCTCTTTGCTGTCCT+TGG | 0.391461 | 1.4:+7761272 | MS.gene058486:CDS |
| TATGCCTTCTTTGTTGTAAC+CGG | 0.395161 | 1.4:+7762031 | MS.gene058486:CDS |
| TCATCTGGAGCTGTGCCATT+TGG | 0.398656 | 1.4:+7761509 | MS.gene058486:CDS |
| GATGATTGTCCTCTTTCTCT+CGG | 0.399152 | 1.4:+7761052 | MS.gene058486:CDS |
| GATTCTAGATAACCTTCCTT+TGG | 0.407859 | 1.4:+7760137 | MS.gene058486:CDS |
| TCCCATAAAGCGTGTGGATC+AGG | 0.408601 | 1.4:+7760164 | MS.gene058486:CDS |
| CACTGAATCTGCCAGAATAG+TGG | 0.409116 | 1.4:+7760399 | MS.gene058486:CDS |
| TCCTGATCCACACGCTTTAT+GGG | 0.409906 | 1.4:-7760165 | None:intergenic |
| CCGGCCTTCTCAGTTCTGAT+AGG | 0.413755 | 1.4:+7761686 | MS.gene058486:CDS |
| CAACTTCGTGATTTCAAGCT+TGG | 0.416283 | 1.4:-7761966 | None:intergenic |
| TATTGAAAATTCACGTTATG+TGG | 0.420978 | 1.4:+7759806 | MS.gene058486:CDS |
| GATTCTACTGTTTATCAGCT+TGG | 0.421408 | 1.4:+7760186 | MS.gene058486:CDS |
| CTTCTTCTTCTCTTCATCAA+TGG | 0.423367 | 1.4:+7757819 | MS.gene058486:CDS |
| AGTAATCCTCACTGCACAAC+TGG | 0.425366 | 1.4:-7761865 | None:intergenic |
| ACATGAATATGAAGGGAAAT+GGG | 0.426030 | 1.4:+7760550 | MS.gene058486:CDS |
| ATTAGCCCACCTCTGTTTGA+AGG | 0.427160 | 1.4:-7761305 | None:intergenic |
| GCTTGTTCAGGGATCTGCCT+TGG | 0.428645 | 1.4:-7761650 | None:intergenic |
| TGCCAGAATAGTGGGCTTTG+AGG | 0.438212 | 1.4:+7760408 | MS.gene058486:CDS |
| CACAAGAGATCTGAGTTGTT+TGG | 0.439121 | 1.4:-7761203 | None:intergenic |
| TTGGATAGTGCTGAAAATCT+TGG | 0.448087 | 1.4:+7759762 | MS.gene058486:CDS |
| TGTATTGAATGGTCTGATAT+GGG | 0.449462 | 1.4:+7761478 | MS.gene058486:CDS |
| GATCTCTTGTGTGTTTATGT+TGG | 0.450113 | 1.4:+7761215 | MS.gene058486:CDS |
| TTTGTTGTAACCGGCACCAT+TGG | 0.456580 | 1.4:+7762040 | MS.gene058486:CDS |
| GGAAGTGAATAATATGTGTA+TGG | 0.459005 | 1.4:-7759717 | None:intergenic |
| ATATGGGGACAAAAGTCATC+TGG | 0.459129 | 1.4:+7761494 | MS.gene058486:CDS |
| TATCAGCTTGGTTTCCATGT+TGG | 0.460613 | 1.4:+7760198 | MS.gene058486:CDS |
| CGGCCTTCTCAGTTCTGATA+GGG | 0.462225 | 1.4:+7761687 | MS.gene058486:CDS |
| GTCATCATTCATCAGCAGAT+AGG | 0.462860 | 1.4:-7760997 | None:intergenic |
| TGTCCTCTTTCTCTCGGGCA+TGG | 0.464468 | 1.4:+7761058 | MS.gene058486:CDS |
| ATGATTGTCCTCTTTCTCTC+GGG | 0.466449 | 1.4:+7761053 | MS.gene058486:CDS |
| AGCTTCTGTTTCTATCTCCC+CGG | 0.475077 | 1.4:+7757843 | MS.gene058486:CDS |
| AATAATATGTGTATGGAAGC+TGG | 0.475548 | 1.4:-7759710 | None:intergenic |
| TGGCGCTCTTACCTCACATC+TGG | 0.475574 | 1.4:+7761896 | MS.gene058486:CDS |
| TTTCCCTCTTCAACTTCTTG+AGG | 0.477051 | 1.4:-7760638 | None:intergenic |
| TCAATGAAAACAGCTCCAAA+TGG | 0.478934 | 1.4:-7761719 | None:intergenic |
| GAAGATTGATGATGAGTATC+GGG | 0.480629 | 1.4:+7760009 | MS.gene058486:CDS |
| GACAGCTATGCTCTTGCTAT+GGG | 0.482841 | 1.4:+7761328 | MS.gene058486:CDS |
| AAAATGGCAGAGACAGAGGC+AGG | 0.487505 | 1.4:-7761452 | None:intergenic |
| GGTTTCCATGTTGGACTCAA+AGG | 0.490497 | 1.4:+7760207 | MS.gene058486:CDS |
| TGACAGCTATGCTCTTGCTA+TGG | 0.490539 | 1.4:+7761327 | MS.gene058486:CDS |
| TCATGTACCACGCTTGTTCA+GGG | 0.491346 | 1.4:-7761661 | None:intergenic |
| AGAATGTTGCATAAAGAAAG+AGG | 0.493377 | 1.4:-7761934 | None:intergenic |
| TCTCCCCGGTGTTGCACCAC+AGG | 0.496049 | 1.4:+7757857 | MS.gene058486:CDS |
| CCACCATGCCCGAGAGAAAG+AGG | 0.498120 | 1.4:-7761061 | None:intergenic |
| CTTTCTCCTTCAAACAGAGG+TGG | 0.502130 | 1.4:+7761299 | MS.gene058486:CDS |
| AAATCCTGTGGTGCAACACC+GGG | 0.504830 | 1.4:-7757861 | None:intergenic |
| CACCTCTGTTTGAAGGAGAA+AGG | 0.505594 | 1.4:-7761298 | None:intergenic |
| GACAACTGTATGTTTAGCAT+GGG | 0.507896 | 1.4:-7760603 | None:intergenic |
| GGACTCAAAGGACAATATAG+TGG | 0.508903 | 1.4:+7760219 | MS.gene058486:CDS |
| GAAATCCTGTGGTGCAACAC+CGG | 0.509595 | 1.4:-7757862 | None:intergenic |
| CAATGAAAACAGCTCCAAAT+GGG | 0.511643 | 1.4:-7761718 | None:intergenic |
| AGTGTTAAACATGAATATGA+AGG | 0.511795 | 1.4:+7760542 | MS.gene058486:intron |
| AGAAGATTGATGATGAGTAT+CGG | 0.514607 | 1.4:+7760008 | MS.gene058486:CDS |
| CGCTTTATGGGAACAACCAA+AGG | 0.515207 | 1.4:-7760153 | None:intergenic |
| AGAGCAAACATTGTTCCAAA+TGG | 0.527819 | 1.4:-7761524 | None:intergenic |
| CCTATCAGAACTGAGAAGGC+CGG | 0.533053 | 1.4:-7761686 | None:intergenic |
| TTTCTCCTTCAAACAGAGGT+GGG | 0.533866 | 1.4:+7761300 | MS.gene058486:CDS |
| CTATCAGAACTGAGAAGGCC+GGG | 0.534233 | 1.4:-7761685 | None:intergenic |
| TGCACCACAGGATTTCCAAA+AGG | 0.534989 | 1.4:+7757869 | MS.gene058486:CDS |
| GACTCAAAGGACAATATAGT+GGG | 0.535283 | 1.4:+7760220 | MS.gene058486:CDS |
| AAGCACAAGAAGAGACTGGT+TGG | 0.539709 | 1.4:+7761150 | MS.gene058486:CDS |
| TGCGTAAAATCCAATGGTGC+CGG | 0.543229 | 1.4:-7762050 | None:intergenic |
| TCAAGAAGTTGAAGAGGGAA+AGG | 0.543806 | 1.4:+7760640 | MS.gene058486:CDS |
| GTATCTGCAATATTATACTT+CGG | 0.545739 | 1.4:+7761989 | MS.gene058486:CDS |
| TGACAACTGTATGTTTAGCA+TGG | 0.550993 | 1.4:-7760604 | None:intergenic |
| ACTGAATCTGCCAGAATAGT+GGG | 0.555697 | 1.4:+7760400 | MS.gene058486:CDS |
| ATTTGACAGTAAATGCCAAA+TGG | 0.557238 | 1.4:-7760360 | None:intergenic |
| GGTTGTTCCCATAAAGCGTG+TGG | 0.557317 | 1.4:+7760158 | MS.gene058486:CDS |
| CATTGTACTTTGAAATATCA+CGG | 0.557682 | 1.4:-7761109 | None:intergenic |
| AAGAGATCTGAGTTGTTTGG+TGG | 0.558660 | 1.4:-7761200 | None:intergenic |
| GGATGACGAAGACCAGAAAG+AGG | 0.558905 | 1.4:-7761799 | None:intergenic |
| CGCTTATACAAAATGTTCAA+AGG | 0.560242 | 1.4:+7761386 | MS.gene058486:CDS |
| ATGTGAAGTGGGCTTCAAGA+TGG | 0.563049 | 1.4:+7760970 | MS.gene058486:CDS |
| GAAGAAGCACAAGAAGAGAC+TGG | 0.567424 | 1.4:+7761146 | MS.gene058486:CDS |
| AAACTGATTCAACCAGATTG+AGG | 0.568595 | 1.4:-7761759 | None:intergenic |
| TTCCTTTCTCCTTCAAACAG+AGG | 0.571385 | 1.4:+7761296 | MS.gene058486:CDS |
| TACTCCTCAAGAAGTTGAAG+AGG | 0.574236 | 1.4:+7760634 | MS.gene058486:CDS |
| CAAGCTTGAAATCACGAAGT+TGG | 0.580482 | 1.4:+7761967 | MS.gene058486:CDS |
| GTGAGGATTACTTGTGGTGG+TGG | 0.581791 | 1.4:+7761876 | MS.gene058486:CDS |
| AAGAATTGAAGAGAACGCGA+TGG | 0.589318 | 1.4:-7757799 | None:intergenic |
| AGTGGAAGAAAATTTCCCTC+AGG | 0.592786 | 1.4:+7761414 | MS.gene058486:CDS |
| CACAGACATACAGACCTGAA+TGG | 0.593857 | 1.4:-7760436 | None:intergenic |
| GAACAAGACTGCAGTCCTGA+GGG | 0.595951 | 1.4:-7761429 | None:intergenic |
| ATAATATGTGTATGGAAGCT+GGG | 0.597147 | 1.4:-7759709 | None:intergenic |
| AAAGAAAATGGCAGAGACAG+AGG | 0.604759 | 1.4:-7761456 | None:intergenic |
| ACAACTGTATGTTTAGCATG+GGG | 0.606268 | 1.4:-7760602 | None:intergenic |
| TGTGAAGTGGGCTTCAAGAT+GGG | 0.611136 | 1.4:+7760971 | MS.gene058486:CDS |
| GCCTTCTCAGTTCTGATAGG+GGG | 0.611204 | 1.4:+7761689 | MS.gene058486:CDS |
| GTGTTAAACATGAATATGAA+GGG | 0.614070 | 1.4:+7760543 | MS.gene058486:intron |
| GGCCTTCTCAGTTCTGATAG+GGG | 0.615040 | 1.4:+7761688 | MS.gene058486:CDS |
| CTACTTCCAGTTGTGCAGTG+AGG | 0.617050 | 1.4:+7761859 | MS.gene058486:CDS |
| TTGAAGGAGAAAGGAATCCA+AGG | 0.617531 | 1.4:-7761289 | None:intergenic |
| GGTGCCGGTTACAACAAAGA+AGG | 0.620039 | 1.4:-7762035 | None:intergenic |
| TTATGGGAACAACCAAAGGA+AGG | 0.622552 | 1.4:-7760149 | None:intergenic |
| ATTGTCCTTTGAGTCCAACA+TGG | 0.625666 | 1.4:-7760212 | None:intergenic |
| ACTCCTCAAGAAGTTGAAGA+GGG | 0.626156 | 1.4:+7760635 | MS.gene058486:CDS |
| TGCAGGAGAGTGATGTGAAG+TGG | 0.630793 | 1.4:+7760958 | MS.gene058486:intron |
| TGAATGATGACCAAATTCAC+TGG | 0.630891 | 1.4:+7761009 | MS.gene058486:CDS |
| AAAGCATGCGTAAAATCCAA+TGG | 0.631715 | 1.4:-7762056 | None:intergenic |
| GGAACAAGACTGCAGTCCTG+AGG | 0.632360 | 1.4:-7761430 | None:intergenic |
| CCTCTTTCTCTCGGGCATGG+TGG | 0.636806 | 1.4:+7761061 | MS.gene058486:CDS |
| TGAAAACAAACAAAATCCCA+AGG | 0.637171 | 1.4:+7761633 | MS.gene058486:CDS |
| GTATTGAATGGTCTGATATG+GGG | 0.638197 | 1.4:+7761479 | MS.gene058486:CDS |
| GGCAGATCCCTGAACAAGCG+TGG | 0.641948 | 1.4:+7761654 | MS.gene058486:CDS |
| GCAGGAGAGTGATGTGAAGT+GGG | 0.642804 | 1.4:+7760959 | MS.gene058486:intron |
| ACTGGTTGGAAGCTTGTCCA+TGG | 0.644200 | 1.4:+7761164 | MS.gene058486:CDS |
| ACAAGCGTGGTACATGAACC+CGG | 0.649898 | 1.4:+7761667 | MS.gene058486:CDS |
| GCAGTGAGGATTACTTGTGG+TGG | 0.656188 | 1.4:+7761873 | MS.gene058486:CDS |
| AAATGGCAGAGACAGAGGCA+GGG | 0.659868 | 1.4:-7761451 | None:intergenic |
| GTGCAGAAGAGCCAGATGTG+AGG | 0.677656 | 1.4:-7761907 | None:intergenic |
| AAATGTTCAAAGGATCAGAG+TGG | 0.690463 | 1.4:+7761396 | MS.gene058486:CDS |
| TGTGCAGTGAGGATTACTTG+TGG | 0.692738 | 1.4:+7761870 | MS.gene058486:CDS |
| CAACTGTATGTTTAGCATGG+GGG | 0.696889 | 1.4:-7760601 | None:intergenic |
| TTTCTGCACAAGTGATAACG+AGG | 0.700675 | 1.4:-7761820 | None:intergenic |
| TTGAAATACACAGAGCAAGG+AGG | 0.723557 | 1.4:+7760318 | MS.gene058486:intron |
| AATCCTGTGGTGCAACACCG+GGG | 0.726841 | 1.4:-7757860 | None:intergenic |
| TGTGTGTAAGCTTAAAGTTG+AGG | 0.748545 | 1.4:+7759961 | MS.gene058486:CDS |
| ACTCAAAGGACAATATAGTG+GGG | 0.752368 | 1.4:+7760221 | MS.gene058486:CDS |
| CTGGAAGTAGCAAAGCACGA+CGG | 0.762251 | 1.4:-7761846 | None:intergenic |
| AATCTTGGAGAAGTGCTCCG+TGG | 0.794103 | 1.4:+7759777 | MS.gene058486:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATAACAATAACAAT+TGG | - | chr1.4:7760886-7760905 | None:intergenic | 10.0% |
| !! | ATCTTATTAGAATTATTAGA+AGG | - | chr1.4:7758628-7758647 | None:intergenic | 15.0% |
| !!! | TAATTAGAATGTTTAGTTTT+CGG | + | chr1.4:7758188-7758207 | MS.gene058486:intron | 15.0% |
| !!! | TATTCTTCTCTAATTATTTT+TGG | + | chr1.4:7760824-7760843 | MS.gene058486:intron | 15.0% |
| !!! | TGTAATTGTTTGAATTTTAT+TGG | + | chr1.4:7758008-7758027 | MS.gene058486:intron | 15.0% |
| !! | AAAACTAAAGAGATAAATGA+AGG | - | chr1.4:7759528-7759547 | None:intergenic | 20.0% |
| !! | AAATTTGAATACAAGAAAGT+TGG | - | chr1.4:7759569-7759588 | None:intergenic | 20.0% |
| !! | AACTAAAAAAAACTCACTAA+CGG | - | chr1.4:7758151-7758170 | None:intergenic | 20.0% |
| !! | AATGATCTAAGAGTTATAAT+TGG | + | chr1.4:7758460-7758479 | MS.gene058486:intron | 20.0% |
| !! | AATTTGAATACAAGAAAGTT+GGG | - | chr1.4:7759568-7759587 | None:intergenic | 20.0% |
| !!! | AACCTTATTTTTACTAGAAA+TGG | - | chr1.4:7759248-7759267 | None:intergenic | 20.0% |
| !!! | TAATTTATTTTATGATGCAG+AGG | + | chr1.4:7758294-7758313 | MS.gene058486:intron | 20.0% |
| !!! | TACCATTTCTAGTAAAAATA+AGG | + | chr1.4:7759243-7759262 | MS.gene058486:intron | 20.0% |
| !!! | TTCAAATTTTGTTGTCATTA+TGG | + | chr1.4:7758088-7758107 | MS.gene058486:intron | 20.0% |
| !!! | TTTGTTGTTCAAAAAACAAA+AGG | - | chr1.4:7758525-7758544 | None:intergenic | 20.0% |
| ! | AAACCATATATTTAACCACT+TGG | - | chr1.4:7760766-7760785 | None:intergenic | 25.0% |
| ! | AAGTGGTTAAATATATGGTT+TGG | + | chr1.4:7760765-7760784 | MS.gene058486:intron | 25.0% |
| ! | ACCATTCAATACAAAGAAAA+TGG | - | chr1.4:7761471-7761490 | None:intergenic | 25.0% |
| ! | AGATTTGTAGATTAGGATTT+AGG | + | chr1.4:7758255-7758274 | MS.gene058486:intron | 25.0% |
| ! | AGTGGTTAAATATATGGTTT+GGG | + | chr1.4:7760766-7760785 | MS.gene058486:intron | 25.0% |
| ! | AGTGTTAAACATGAATATGA+AGG | + | chr1.4:7760542-7760561 | MS.gene058486:intron | 25.0% |
| ! | CACAAGAAGAAGAAAAAAAT+TGG | - | chr1.4:7760289-7760308 | None:intergenic | 25.0% |
| ! | GTATCTGCAATATTATACTT+CGG | + | chr1.4:7761989-7762008 | MS.gene058486:CDS | 25.0% |
| ! | GTGTTAAACATGAATATGAA+GGG | + | chr1.4:7760543-7760562 | MS.gene058486:intron | 25.0% |
| ! | TATTGAAAATTCACGTTATG+TGG | + | chr1.4:7759806-7759825 | MS.gene058486:CDS | 25.0% |
| ! | TTAGTGAAAATACAAGTCAT+CGG | - | chr1.4:7759302-7759321 | None:intergenic | 25.0% |
| ! | TTGACATTGCAAAATTGATT+TGG | + | chr1.4:7759111-7759130 | MS.gene058486:intron | 25.0% |
| !! | CTTTGAACATTTTGTATAAG+CGG | - | chr1.4:7761388-7761407 | None:intergenic | 25.0% |
| !! | TTGGTAAACATGGATTTTAA+TGG | + | chr1.4:7759086-7759105 | MS.gene058486:intron | 25.0% |
| !! | TTTGAACATTTTGTATAAGC+GGG | - | chr1.4:7761387-7761406 | None:intergenic | 25.0% |
| !! | TTTTAATCAATGTTGTCAAG+TGG | + | chr1.4:7758727-7758746 | MS.gene058486:intron | 25.0% |
| !!! | ATTTTAGTGAAAGATGATGA+TGG | + | chr1.4:7760901-7760920 | MS.gene058486:intron | 25.0% |
| !!! | CATTGTACTTTGAAATATCA+CGG | - | chr1.4:7761112-7761131 | None:intergenic | 25.0% |
| !!! | GAATTTTATTGGTGATGAAT+TGG | + | chr1.4:7758019-7758038 | MS.gene058486:intron | 25.0% |
| !!! | GTTTAATTTTCATGCAATGT+CGG | + | chr1.4:7758348-7758367 | MS.gene058486:intron | 25.0% |
| !!! | GTTTTTTATACACAACCATT+TGG | + | chr1.4:7760345-7760364 | MS.gene058486:CDS | 25.0% |
| !!! | TATGCATTCTTACTGATTTT+CGG | + | chr1.4:7760501-7760520 | MS.gene058486:intron | 25.0% |
| AACATGAATATGAAGGGAAA+TGG | + | chr1.4:7760549-7760568 | MS.gene058486:CDS | 30.0% | |
| AACTTCTCATAGTCTTCATT+GGG | + | chr1.4:7759347-7759366 | MS.gene058486:intron | 30.0% | |
| AATAATATGTGTATGGAAGC+TGG | - | chr1.4:7759713-7759732 | None:intergenic | 30.0% | |
| ACATGAATATGAAGGGAAAT+GGG | + | chr1.4:7760550-7760569 | MS.gene058486:CDS | 30.0% | |
| AGAATGTTGCATAAAGAAAG+AGG | - | chr1.4:7761937-7761956 | None:intergenic | 30.0% | |
| ATAATATGTGTATGGAAGCT+GGG | - | chr1.4:7759712-7759731 | None:intergenic | 30.0% | |
| ATGCCAAGTGGTTAAATATA+TGG | + | chr1.4:7760760-7760779 | MS.gene058486:intron | 30.0% | |
| ATTTGACAGTAAATGCCAAA+TGG | - | chr1.4:7760363-7760382 | None:intergenic | 30.0% | |
| CAAATTATGCTTGTTTGGTT+TGG | + | chr1.4:7758923-7758942 | MS.gene058486:intron | 30.0% | |
| CGCTTATACAAAATGTTCAA+AGG | + | chr1.4:7761386-7761405 | MS.gene058486:CDS | 30.0% | |
| CTAAAATCACATTTGACACA+AGG | + | chr1.4:7759318-7759337 | MS.gene058486:intron | 30.0% | |
| CTAAAATGTGCGAATGAAAT+CGG | - | chr1.4:7757912-7757931 | None:intergenic | 30.0% | |
| CTGACTATTCCAATATTACA+TGG | + | chr1.4:7759635-7759654 | MS.gene058486:intron | 30.0% | |
| GACATGTTATTGTTAACACT+TGG | + | chr1.4:7759841-7759860 | MS.gene058486:intron | 30.0% | |
| GATCTTCAATATCAAGATAG+TGG | - | chr1.4:7760089-7760108 | None:intergenic | 30.0% | |
| GGAAGTGAATAATATGTGTA+TGG | - | chr1.4:7759720-7759739 | None:intergenic | 30.0% | |
| GGAGATATAAGACAATTTAC+TGG | - | chr1.4:7760052-7760071 | None:intergenic | 30.0% | |
| TAAATTGTCTTATATCTCCG+TGG | + | chr1.4:7760053-7760072 | MS.gene058486:intron | 30.0% | |
| TAACTTCTCATAGTCTTCAT+TGG | + | chr1.4:7759346-7759365 | MS.gene058486:intron | 30.0% | |
| TACTACGTTTGAATACCTAT+TGG | + | chr1.4:7760730-7760749 | MS.gene058486:intron | 30.0% | |
| TGAAAACAAACAAAATCCCA+AGG | + | chr1.4:7761633-7761652 | MS.gene058486:CDS | 30.0% | |
| TGCATCAAATTATGCTTGTT+TGG | + | chr1.4:7758918-7758937 | MS.gene058486:intron | 30.0% | |
| TGTATTGAATGGTCTGATAT+GGG | + | chr1.4:7761478-7761497 | MS.gene058486:CDS | 30.0% | |
| TTGTATTGAATGGTCTGATA+TGG | + | chr1.4:7761477-7761496 | MS.gene058486:CDS | 30.0% | |
| TTTATTAAGATGATCTCACC+AGG | - | chr1.4:7760694-7760713 | None:intergenic | 30.0% | |
| ! | AATTTTCAATACGATCACCA+CGG | - | chr1.4:7759797-7759816 | None:intergenic | 30.0% |
| ! | GGTAAAAAGTTTTACACTCT+CGG | + | chr1.4:7758375-7758394 | MS.gene058486:intron | 30.0% |
| ! | TAGGATTTAGGAGTATGAAT+CGG | + | chr1.4:7758267-7758286 | MS.gene058486:intron | 30.0% |
| ! | TCTTTTGCCTACATGTATTT+GGG | + | chr1.4:7759055-7759074 | MS.gene058486:intron | 30.0% |
| ! | TGTTTGCTCTGATCTTTTTA+TGG | + | chr1.4:7761537-7761556 | MS.gene058486:CDS | 30.0% |
| ! | TTCTTTTGCCTACATGTATT+TGG | + | chr1.4:7759054-7759073 | MS.gene058486:intron | 30.0% |
| ! | TTGAAATGAAACGAACCTTT+TGG | - | chr1.4:7757887-7757906 | None:intergenic | 30.0% |
| ! | TTTGAATGCTTTTGCAGTTT+TGG | - | chr1.4:7759987-7760006 | None:intergenic | 30.0% |
| !! | AGAAGATTGATGATGAGTAT+CGG | + | chr1.4:7760008-7760027 | MS.gene058486:CDS | 30.0% |
| !! | GCCATTTTCTTTGTATTGAA+TGG | + | chr1.4:7761467-7761486 | MS.gene058486:CDS | 30.0% |
| !! | TAGAAAGTGTTGTCAATTAG+AGG | + | chr1.4:7758806-7758825 | MS.gene058486:intron | 30.0% |
| !!! | ACTATCCAAGATTTTTTCTG+GGG | - | chr1.4:7759751-7759770 | None:intergenic | 30.0% |
| !!! | CACTATCCAAGATTTTTTCT+GGG | - | chr1.4:7759752-7759771 | None:intergenic | 30.0% |
| AAAGCATGCGTAAAATCCAA+TGG | - | chr1.4:7762059-7762078 | None:intergenic | 35.0% | |
| AAATGTTCAAAGGATCAGAG+TGG | + | chr1.4:7761396-7761415 | MS.gene058486:CDS | 35.0% | |
| AACGAGTAAACTGTAGTGTT+CGG | - | chr1.4:7759376-7759395 | None:intergenic | 35.0% | |
| ACAAACCATGGCTAAAATAG+TGG | - | chr1.4:7758976-7758995 | None:intergenic | 35.0% | |
| ACAACTGTATGTTTAGCATG+GGG | - | chr1.4:7760605-7760624 | None:intergenic | 35.0% | |
| ACTCAAAGGACAATATAGTG+GGG | + | chr1.4:7760221-7760240 | MS.gene058486:CDS | 35.0% | |
| AGAGCAAACATTGTTCCAAA+TGG | - | chr1.4:7761527-7761546 | None:intergenic | 35.0% | |
| AGGCCAGAAAACTTTATTGT+AGG | - | chr1.4:7759508-7759527 | None:intergenic | 35.0% | |
| ATGTCAAACTAGCATTCTTC+AGG | - | chr1.4:7759183-7759202 | None:intergenic | 35.0% | |
| ATGTTGAAATACACAGAGCA+AGG | + | chr1.4:7760315-7760334 | MS.gene058486:intron | 35.0% | |
| ATTCCAATATTACATGGTGC+AGG | + | chr1.4:7759641-7759660 | MS.gene058486:intron | 35.0% | |
| CAATGAAAACAGCTCCAAAT+GGG | - | chr1.4:7761721-7761740 | None:intergenic | 35.0% | |
| CAATTGAGAACCAGTGAATT+TGG | - | chr1.4:7761022-7761041 | None:intergenic | 35.0% | |
| CACATATGATGTTGAATTCC+TGG | + | chr1.4:7760673-7760692 | MS.gene058486:CDS | 35.0% | |
| CAGTAGGAGATTTGTAGATT+AGG | + | chr1.4:7758248-7758267 | MS.gene058486:intron | 35.0% | |
| CAGTTTACTCGTTCAATTTG+AGG | + | chr1.4:7759383-7759402 | MS.gene058486:intron | 35.0% | |
| CCAGAAAACTTTATTGTAGG+TGG | - | chr1.4:7759505-7759524 | None:intergenic | 35.0% | |
| CTTCTTCTTCTCTTCATCAA+TGG | + | chr1.4:7757819-7757838 | MS.gene058486:CDS | 35.0% | |
| GACAACTGTATGTTTAGCAT+GGG | - | chr1.4:7760606-7760625 | None:intergenic | 35.0% | |
| GACTCAAAGGACAATATAGT+GGG | + | chr1.4:7760220-7760239 | MS.gene058486:CDS | 35.0% | |
| GATCTCTTGTGTGTTTATGT+TGG | + | chr1.4:7761215-7761234 | MS.gene058486:CDS | 35.0% | |
| GATTCTACTGTTTATCAGCT+TGG | + | chr1.4:7760186-7760205 | MS.gene058486:CDS | 35.0% | |
| GATTCTAGATAACCTTCCTT+TGG | + | chr1.4:7760137-7760156 | MS.gene058486:CDS | 35.0% | |
| GTATTGAATGGTCTGATATG+GGG | + | chr1.4:7761479-7761498 | MS.gene058486:CDS | 35.0% | |
| TAGAGGATATAGCTACTGTA+GGG | + | chr1.4:7758823-7758842 | MS.gene058486:intron | 35.0% | |
| TCAATGAAAACAGCTCCAAA+TGG | - | chr1.4:7761722-7761741 | None:intergenic | 35.0% | |
| TGAATGATGACCAAATTCAC+TGG | + | chr1.4:7761009-7761028 | MS.gene058486:CDS | 35.0% | |
| TGACAACTGTATGTTTAGCA+TGG | - | chr1.4:7760607-7760626 | None:intergenic | 35.0% | |
| TGTCAAACTAGCATTCTTCA+GGG | - | chr1.4:7759182-7759201 | None:intergenic | 35.0% | |
| TGTGTGTAAGCTTAAAGTTG+AGG | + | chr1.4:7759961-7759980 | MS.gene058486:CDS | 35.0% | |
| TGTTATTGTTAACACTTGGC+TGG | + | chr1.4:7759845-7759864 | MS.gene058486:intron | 35.0% | |
| TTAGAGGATATAGCTACTGT+AGG | + | chr1.4:7758822-7758841 | MS.gene058486:intron | 35.0% | |
| TTCCAATATTACATGGTGCA+GGG | + | chr1.4:7759642-7759661 | MS.gene058486:intron | 35.0% | |
| TTGTGTGTTTATGTTGGTAC+TGG | + | chr1.4:7761221-7761240 | MS.gene058486:CDS | 35.0% | |
| ! | AAACTGATTCAACCAGATTG+AGG | - | chr1.4:7761762-7761781 | None:intergenic | 35.0% |
| ! | CCACCTACAATAAAGTTTTC+TGG | + | chr1.4:7759502-7759521 | MS.gene058486:intron | 35.0% |
| ! | CGATTTCATTCGCACATTTT+AGG | + | chr1.4:7757910-7757929 | MS.gene058486:intron | 35.0% |
| ! | GCTCTGATCTTTTTATGGTT+TGG | + | chr1.4:7761542-7761561 | MS.gene058486:CDS | 35.0% |
| ! | GGTGTTTGAAATGTAACAGT+AGG | + | chr1.4:7758232-7758251 | MS.gene058486:intron | 35.0% |
| ! | GGTTAAATATATGGTTTGGG+CGG | + | chr1.4:7760769-7760788 | MS.gene058486:intron | 35.0% |
| ! | TATGCCTTCTTTGTTGTAAC+CGG | + | chr1.4:7762031-7762050 | MS.gene058486:CDS | 35.0% |
| ! | TTCAACTTCTTGAGGAGTAT+TGG | - | chr1.4:7760633-7760652 | None:intergenic | 35.0% |
| ! | TTCACAGGATTTTCAATTGC+AGG | - | chr1.4:7761617-7761636 | None:intergenic | 35.0% |
| ! | TTGGATAGTGCTGAAAATCT+TGG | + | chr1.4:7759762-7759781 | MS.gene058486:CDS | 35.0% |
| ! | TTGGATTTTACGCATGCTTT+TGG | + | chr1.4:7762059-7762078 | MS.gene058486:CDS | 35.0% |
| !! | GAAGATTGATGATGAGTATC+GGG | + | chr1.4:7760009-7760028 | MS.gene058486:CDS | 35.0% |
| !! | GGGATTTTGTTTGTTTTCAC+AGG | - | chr1.4:7761632-7761651 | None:intergenic | 35.0% |
| !! | TTGTCCATGGTGATGTTTTT+AGG | + | chr1.4:7761177-7761196 | MS.gene058486:CDS | 35.0% |
| !!! | ACTATTTTAGCCATGGTTTG+TGG | + | chr1.4:7758975-7758994 | MS.gene058486:intron | 35.0% |
| !!! | ATTTTTTCTGGGGGACAATA+AGG | - | chr1.4:7759741-7759760 | None:intergenic | 35.0% |
| !!! | CTATCCAAGATTTTTTCTGG+GGG | - | chr1.4:7759750-7759769 | None:intergenic | 35.0% |
| !!! | GCACTATCCAAGATTTTTTC+TGG | - | chr1.4:7759753-7759772 | None:intergenic | 35.0% |
| !!! | GTACTGGTGTTCAGTTTTTT+GGG | + | chr1.4:7761237-7761256 | MS.gene058486:CDS | 35.0% |
| !!! | TCAGTTCCACTTGTTTTTGT+TGG | + | chr1.4:7761569-7761588 | MS.gene058486:CDS | 35.0% |
| AAAGAAAATGGCAGAGACAG+AGG | - | chr1.4:7761459-7761478 | None:intergenic | 40.0% | |
| AACATCACCTCGGAAAATAC+AGG | - | chr1.4:7759480-7759499 | None:intergenic | 40.0% | |
| AAGAATTGAAGAGAACGCGA+TGG | - | chr1.4:7757802-7757821 | None:intergenic | 40.0% | |
| AAGAGATCTGAGTTGTTTGG+TGG | - | chr1.4:7761203-7761222 | None:intergenic | 40.0% | |
| ACAAGAAAGTTGGGACTCAA+GGG | - | chr1.4:7759559-7759578 | None:intergenic | 40.0% | |
| ACATCACCTCGGAAAATACA+GGG | - | chr1.4:7759479-7759498 | None:intergenic | 40.0% | |
| ACTCCTCAAGAAGTTGAAGA+GGG | + | chr1.4:7760635-7760654 | MS.gene058486:CDS | 40.0% | |
| ACTGAATCTGCCAGAATAGT+GGG | + | chr1.4:7760400-7760419 | MS.gene058486:CDS | 40.0% | |
| AGTGGAAGAAAATTTCCCTC+AGG | + | chr1.4:7761414-7761433 | MS.gene058486:CDS | 40.0% | |
| ATAGTACTTAGCCCACAAGA+CGG | + | chr1.4:7758573-7758592 | MS.gene058486:intron | 40.0% | |
| ATAGTGGCAGAAAATAGCCA+CGG | - | chr1.4:7760073-7760092 | None:intergenic | 40.0% | |
| ATATGGGGACAAAAGTCATC+TGG | + | chr1.4:7761494-7761513 | MS.gene058486:CDS | 40.0% | |
| ATGATTGTCCTCTTTCTCTC+GGG | + | chr1.4:7761053-7761072 | MS.gene058486:CDS | 40.0% | |
| ATTGTCCTTTGAGTCCAACA+TGG | - | chr1.4:7760215-7760234 | None:intergenic | 40.0% | |
| CAACTGTATGTTTAGCATGG+GGG | - | chr1.4:7760604-7760623 | None:intergenic | 40.0% | |
| CAACTTCGTGATTTCAAGCT+TGG | - | chr1.4:7761969-7761988 | None:intergenic | 40.0% | |
| CAAGCTTGAAATCACGAAGT+TGG | + | chr1.4:7761967-7761986 | MS.gene058486:CDS | 40.0% | |
| CACAAGAGATCTGAGTTGTT+TGG | - | chr1.4:7761206-7761225 | None:intergenic | 40.0% | |
| CACACAACATTGCACATTTG+TGG | - | chr1.4:7759947-7759966 | None:intergenic | 40.0% | |
| CTCTTCTTGTGCTTCTTCTT+GGG | - | chr1.4:7761144-7761163 | None:intergenic | 40.0% | |
| GATAATTGTGTTGTGGTCAG+TGG | + | chr1.4:7759867-7759886 | MS.gene058486:intron | 40.0% | |
| GATGATTGTCCTCTTTCTCT+CGG | + | chr1.4:7761052-7761071 | MS.gene058486:CDS | 40.0% | |
| GGACTCAAAGGACAATATAG+TGG | + | chr1.4:7760219-7760238 | MS.gene058486:CDS | 40.0% | |
| GTAAGAATGCATACCACAAC+TGG | - | chr1.4:7760494-7760513 | None:intergenic | 40.0% | |
| GTCATCATTCATCAGCAGAT+AGG | - | chr1.4:7761000-7761019 | None:intergenic | 40.0% | |
| TACAAGAAAGTTGGGACTCA+AGG | - | chr1.4:7759560-7759579 | None:intergenic | 40.0% | |
| TACTCCTCAAGAAGTTGAAG+AGG | + | chr1.4:7760634-7760653 | MS.gene058486:CDS | 40.0% | |
| TAGCCACCAACAAAAACAAG+TGG | - | chr1.4:7761578-7761597 | None:intergenic | 40.0% | |
| TATCAGCTTGGTTTCCATGT+TGG | + | chr1.4:7760198-7760217 | MS.gene058486:CDS | 40.0% | |
| TCAAGAAGTTGAAGAGGGAA+AGG | + | chr1.4:7760640-7760659 | MS.gene058486:CDS | 40.0% | |
| TCTCTTCTTGTGCTTCTTCT+TGG | - | chr1.4:7761145-7761164 | None:intergenic | 40.0% | |
| TCTTCATTCTCACCTCAATC+TGG | + | chr1.4:7761747-7761766 | MS.gene058486:CDS | 40.0% | |
| TTATGGGAACAACCAAAGGA+AGG | - | chr1.4:7760152-7760171 | None:intergenic | 40.0% | |
| TTCCTTTCTCCTTCAAACAG+AGG | + | chr1.4:7761296-7761315 | MS.gene058486:CDS | 40.0% | |
| TTGAAATACACAGAGCAAGG+AGG | + | chr1.4:7760318-7760337 | MS.gene058486:intron | 40.0% | |
| TTGAAGGAGAAAGGAATCCA+AGG | - | chr1.4:7761292-7761311 | None:intergenic | 40.0% | |
| TTGGCTGGATAATTGTGTTG+TGG | + | chr1.4:7759860-7759879 | MS.gene058486:intron | 40.0% | |
| TTGTCCCCCAGAAAAAATCT+TGG | + | chr1.4:7759743-7759762 | MS.gene058486:CDS | 40.0% | |
| TTTCCCTCTTCAACTTCTTG+AGG | - | chr1.4:7760641-7760660 | None:intergenic | 40.0% | |
| TTTCTCCTTCAAACAGAGGT+GGG | + | chr1.4:7761300-7761319 | MS.gene058486:CDS | 40.0% | |
| ! | ATGTATTTGGGCGAGCATTT+TGG | + | chr1.4:7759067-7759086 | MS.gene058486:intron | 40.0% |
| ! | ATTTTCATGCAATGTCGGTG+TGG | + | chr1.4:7758353-7758372 | MS.gene058486:intron | 40.0% |
| ! | CATGTGTGTGACTTTGAAAG+TGG | + | chr1.4:7758413-7758432 | MS.gene058486:intron | 40.0% |
| ! | CGTTCAATTTGAGGTTTCTG+TGG | + | chr1.4:7759392-7759411 | MS.gene058486:intron | 40.0% |
| ! | GTTTTCATGGGGATTTTTGC+TGG | + | chr1.4:7761350-7761369 | MS.gene058486:CDS | 40.0% |
| ! | TCTAGAATCCTGCACATAGA+AGG | - | chr1.4:7760126-7760145 | None:intergenic | 40.0% |
| ! | TTTCTGCACAAGTGATAACG+AGG | - | chr1.4:7761823-7761842 | None:intergenic | 40.0% |
| ! | TTTTCATGCAATGTCGGTGT+GGG | + | chr1.4:7758354-7758373 | MS.gene058486:intron | 40.0% |
| !! | CTCTTGCTATGGGTTTTCAT+GGG | + | chr1.4:7761338-7761357 | MS.gene058486:CDS | 40.0% |
| !! | TCTTGCTATGGGTTTTCATG+GGG | + | chr1.4:7761339-7761358 | MS.gene058486:CDS | 40.0% |
| !!! | GAATGTTTAGTTTTCGGCTG+TGG | + | chr1.4:7758194-7758213 | MS.gene058486:intron | 40.0% |
| !!! | GGTACTGGTGTTCAGTTTTT+TGG | + | chr1.4:7761236-7761255 | MS.gene058486:CDS | 40.0% |
| !!! | GTTCCACTTGTTTTTGTTGG+TGG | + | chr1.4:7761572-7761591 | MS.gene058486:CDS | 40.0% |
| !!! | GTTTTTGTTGGTGGCTATGT+TGG | + | chr1.4:7761581-7761600 | MS.gene058486:CDS | 40.0% |
| !!! | TTCTGCCACTATTTTAGCCA+TGG | + | chr1.4:7758968-7758987 | MS.gene058486:intron | 40.0% |
| AACCTCAAAGCCCACTATTC+TGG | - | chr1.4:7760413-7760432 | None:intergenic | 45.0% | |
| AAGCACAAGAAGAGACTGGT+TGG | + | chr1.4:7761150-7761169 | MS.gene058486:CDS | 45.0% | |
| AGTAATCCTCACTGCACAAC+TGG | - | chr1.4:7761868-7761887 | None:intergenic | 45.0% | |
| ATAGGGGGAATACTCCCATT+TGG | + | chr1.4:7761704-7761723 | MS.gene058486:CDS | 45.0% | |
| ATCCTGATCCACACGCTTTA+TGG | - | chr1.4:7760169-7760188 | None:intergenic | 45.0% | |
| ATCCTGCACATAGAAGGTAG+AGG | - | chr1.4:7760120-7760139 | None:intergenic | 45.0% | |
| ATGCTCGCCCAAATACATGT+AGG | - | chr1.4:7759065-7759084 | None:intergenic | 45.0% | |
| ATTAGCCCACCTCTGTTTGA+AGG | - | chr1.4:7761308-7761327 | None:intergenic | 45.0% | |
| ATTTACCTCTGCCTACTTGC+AGG | + | chr1.4:7760941-7760960 | MS.gene058486:intron | 45.0% | |
| CACAGACATACAGACCTGAA+TGG | - | chr1.4:7760439-7760458 | None:intergenic | 45.0% | |
| CACCTCTGTTTGAAGGAGAA+AGG | - | chr1.4:7761301-7761320 | None:intergenic | 45.0% | |
| CACTGAATCTGCCAGAATAG+TGG | + | chr1.4:7760399-7760418 | MS.gene058486:CDS | 45.0% | |
| CGCTTTATGGGAACAACCAA+AGG | - | chr1.4:7760156-7760175 | None:intergenic | 45.0% | |
| CTCCCTGCACCATGTAATAT+TGG | - | chr1.4:7759647-7759666 | None:intergenic | 45.0% | |
| CTGTCAATCACAGAACAACG+AGG | - | chr1.4:7759019-7759038 | None:intergenic | 45.0% | |
| CTTGGCATATGCAAGCCAAT+AGG | - | chr1.4:7760748-7760767 | None:intergenic | 45.0% | |
| CTTTCTCCTTCAAACAGAGG+TGG | + | chr1.4:7761299-7761318 | MS.gene058486:CDS | 45.0% | |
| GACGTAAAAGCCACAAACCA+TGG | - | chr1.4:7758988-7759007 | None:intergenic | 45.0% | |
| GGTTTCCATGTTGGACTCAA+AGG | + | chr1.4:7760207-7760226 | MS.gene058486:CDS | 45.0% | |
| GTAGGTGGTTAACATCACCT+CGG | - | chr1.4:7759490-7759509 | None:intergenic | 45.0% | |
| GTGGCCTAAAAACATCACCA+TGG | - | chr1.4:7761184-7761203 | None:intergenic | 45.0% | |
| TAGTACTTAGCCCACAAGAC+GGG | + | chr1.4:7758574-7758593 | MS.gene058486:intron | 45.0% | |
| TCAGTCTGTCAAACCAGTTG+TGG | + | chr1.4:7760478-7760497 | MS.gene058486:intron | 45.0% | |
| TCATGTACCACGCTTGTTCA+GGG | - | chr1.4:7761664-7761683 | None:intergenic | 45.0% | |
| TCCTGATCCACACGCTTTAT+GGG | - | chr1.4:7760168-7760187 | None:intergenic | 45.0% | |
| TGACAGCTATGCTCTTGCTA+TGG | + | chr1.4:7761327-7761346 | MS.gene058486:CDS | 45.0% | |
| TGCAAGTAGGCAGAGGTAAA+TGG | - | chr1.4:7760942-7760961 | None:intergenic | 45.0% | |
| TGCACCACAGGATTTCCAAA+AGG | + | chr1.4:7757869-7757888 | MS.gene058486:CDS | 45.0% | |
| TGCGTAAAATCCAATGGTGC+CGG | - | chr1.4:7762053-7762072 | None:intergenic | 45.0% | |
| TGTGCAGTGAGGATTACTTG+TGG | + | chr1.4:7761870-7761889 | MS.gene058486:CDS | 45.0% | |
| TTCATGTACCACGCTTGTTC+AGG | - | chr1.4:7761665-7761684 | None:intergenic | 45.0% | |
| ! | ACAAGACGGGAAAAGTACAC+GGG | + | chr1.4:7758587-7758606 | MS.gene058486:intron | 45.0% |
| ! | ACAATGCTCTTTGCTGTCCT+TGG | + | chr1.4:7761272-7761291 | MS.gene058486:CDS | 45.0% |
| ! | ATGTGAAGTGGGCTTCAAGA+TGG | + | chr1.4:7760970-7760989 | MS.gene058486:CDS | 45.0% |
| ! | CACAAGACGGGAAAAGTACA+CGG | + | chr1.4:7758586-7758605 | MS.gene058486:intron | 45.0% |
| ! | CATCTTTGGCTTCCTCTTTC+TGG | + | chr1.4:7761787-7761806 | MS.gene058486:CDS | 45.0% |
| ! | GAAGAAGCACAAGAAGAGAC+TGG | + | chr1.4:7761146-7761165 | MS.gene058486:CDS | 45.0% |
| ! | GACAGCTATGCTCTTGCTAT+GGG | + | chr1.4:7761328-7761347 | MS.gene058486:CDS | 45.0% |
| ! | GTGTACTTTTCCCGTCTTGT+GGG | - | chr1.4:7758587-7758606 | None:intergenic | 45.0% |
| ! | TGTGAAGTGGGCTTCAAGAT+GGG | + | chr1.4:7760971-7760990 | MS.gene058486:CDS | 45.0% |
| ! | TTGGTGGCTATGTTGGATTC+AGG | + | chr1.4:7761588-7761607 | MS.gene058486:CDS | 45.0% |
| ! | TTTGTTGTAACCGGCACCAT+TGG | + | chr1.4:7762040-7762059 | MS.gene058486:CDS | 45.0% |
| !! | AGCTTCTGTTTCTATCTCCC+CGG | + | chr1.4:7757843-7757862 | MS.gene058486:CDS | 45.0% |
| !! | ATTGGCTTGCATATGCCAAG+TGG | + | chr1.4:7760748-7760767 | MS.gene058486:intron | 45.0% |
| !! | CGAACCTTTTGGAAATCCTG+TGG | - | chr1.4:7757876-7757895 | None:intergenic | 45.0% |
| !! | GAGTATCGGGTGAACATGTA+CGG | + | chr1.4:7760022-7760041 | MS.gene058486:intron | 45.0% |
| !! | GCTCTTGCTATGGGTTTTCA+TGG | + | chr1.4:7761337-7761356 | MS.gene058486:CDS | 45.0% |
| !! | GCTTTGAGGTTAAGCCATTC+AGG | + | chr1.4:7760422-7760441 | MS.gene058486:CDS | 45.0% |
| !! | GGCGAGCATTTTGGTAAACA+TGG | + | chr1.4:7759076-7759095 | MS.gene058486:intron | 45.0% |
| !!! | ACGCATGCTTTTGGTTCACA+AGG | + | chr1.4:7762068-7762087 | MS.gene058486:CDS | 45.0% |
| AAAATGGCAGAGACAGAGGC+AGG | - | chr1.4:7761455-7761474 | None:intergenic | 50.0% | |
| AAATCCTGTGGTGCAACACC+GGG | - | chr1.4:7757864-7757883 | None:intergenic | 50.0% | |
| AAATGGCAGAGACAGAGGCA+GGG | - | chr1.4:7761454-7761473 | None:intergenic | 50.0% | |
| ACAAGCGTGGTACATGAACC+CGG | + | chr1.4:7761667-7761686 | MS.gene058486:CDS | 50.0% | |
| ACTGGTTGGAAGCTTGTCCA+TGG | + | chr1.4:7761164-7761183 | MS.gene058486:CDS | 50.0% | |
| ATGTTTAGCATGGGGGTCAC+AGG | - | chr1.4:7760597-7760616 | None:intergenic | 50.0% | |
| CACATCACTCTCCTGCAAGT+AGG | - | chr1.4:7760955-7760974 | None:intergenic | 50.0% | |
| CCTATCAGAACTGAGAAGGC+CGG | - | chr1.4:7761689-7761708 | None:intergenic | 50.0% | |
| CTACTTCCAGTTGTGCAGTG+AGG | + | chr1.4:7761859-7761878 | MS.gene058486:CDS | 50.0% | |
| CTATCAGAACTGAGAAGGCC+GGG | - | chr1.4:7761688-7761707 | None:intergenic | 50.0% | |
| CTGGAAGTAGCAAAGCACGA+CGG | - | chr1.4:7761849-7761868 | None:intergenic | 50.0% | |
| CTGTGGATGCATGTGATGTG+AGG | + | chr1.4:7758211-7758230 | MS.gene058486:intron | 50.0% | |
| CTTGTTCAGGGATCTGCCTT+GGG | - | chr1.4:7761652-7761671 | None:intergenic | 50.0% | |
| GAAAGTTGGGACTCAAGGGT+AGG | - | chr1.4:7759555-7759574 | None:intergenic | 50.0% | |
| GAAATCCTGTGGTGCAACAC+CGG | - | chr1.4:7757865-7757884 | None:intergenic | 50.0% | |
| GAACAAGACTGCAGTCCTGA+GGG | - | chr1.4:7761432-7761451 | None:intergenic | 50.0% | |
| GCAGGAGAGTGATGTGAAGT+GGG | + | chr1.4:7760959-7760978 | MS.gene058486:intron | 50.0% | |
| GCAGTGAGGATTACTTGTGG+TGG | + | chr1.4:7761873-7761892 | MS.gene058486:CDS | 50.0% | |
| GGATGACGAAGACCAGAAAG+AGG | - | chr1.4:7761802-7761821 | None:intergenic | 50.0% | |
| GGGTAGTCGAGTGAATGTGA+CGG | - | chr1.4:7759459-7759478 | None:intergenic | 50.0% | |
| GGTTGTTCCCATAAAGCGTG+TGG | + | chr1.4:7760158-7760177 | MS.gene058486:CDS | 50.0% | |
| GTGAGGATTACTTGTGGTGG+TGG | + | chr1.4:7761876-7761895 | MS.gene058486:CDS | 50.0% | |
| TCCCATAAAGCGTGTGGATC+AGG | + | chr1.4:7760164-7760183 | MS.gene058486:CDS | 50.0% | |
| TCCCCCTATCAGAACTGAGA+AGG | - | chr1.4:7761693-7761712 | None:intergenic | 50.0% | |
| TGCAGGAGAGTGATGTGAAG+TGG | + | chr1.4:7760958-7760977 | MS.gene058486:intron | 50.0% | |
| TGCCTCTACCTTCTATGTGC+AGG | + | chr1.4:7760115-7760134 | MS.gene058486:intron | 50.0% | |
| ! | CAAGACGGGAAAAGTACACG+GGG | + | chr1.4:7758588-7758607 | MS.gene058486:intron | 50.0% |
| ! | CGACTACCCTGTATTTTCCG+AGG | + | chr1.4:7759470-7759489 | MS.gene058486:intron | 50.0% |
| ! | CGGCCTTCTCAGTTCTGATA+GGG | + | chr1.4:7761687-7761706 | MS.gene058486:CDS | 50.0% |
| ! | CGTGTACTTTTCCCGTCTTG+TGG | - | chr1.4:7758588-7758607 | None:intergenic | 50.0% |
| ! | GCCTTCTCAGTTCTGATAGG+GGG | + | chr1.4:7761689-7761708 | MS.gene058486:CDS | 50.0% |
| ! | GGCCTTCTCAGTTCTGATAG+GGG | + | chr1.4:7761688-7761707 | MS.gene058486:CDS | 50.0% |
| ! | TCATCTGGAGCTGTGCCATT+TGG | + | chr1.4:7761509-7761528 | MS.gene058486:CDS | 50.0% |
| !! | AATCTTGGAGAAGTGCTCCG+TGG | + | chr1.4:7759777-7759796 | MS.gene058486:CDS | 50.0% |
| !! | GGTGCCGGTTACAACAAAGA+AGG | - | chr1.4:7762038-7762057 | None:intergenic | 50.0% |
| !! | TGCCAGAATAGTGGGCTTTG+AGG | + | chr1.4:7760408-7760427 | MS.gene058486:CDS | 50.0% |
| AATCCTGTGGTGCAACACCG+GGG | - | chr1.4:7757863-7757882 | None:intergenic | 55.0% | |
| ACTCTCCTGCAAGTAGGCAG+AGG | - | chr1.4:7760949-7760968 | None:intergenic | 55.0% | |
| GCTTGTTCAGGGATCTGCCT+TGG | - | chr1.4:7761653-7761672 | None:intergenic | 55.0% | |
| GGAACAAGACTGCAGTCCTG+AGG | - | chr1.4:7761433-7761452 | None:intergenic | 55.0% | |
| GTGCAGAAGAGCCAGATGTG+AGG | - | chr1.4:7761910-7761929 | None:intergenic | 55.0% | |
| TGGCGCTCTTACCTCACATC+TGG | + | chr1.4:7761896-7761915 | MS.gene058486:CDS | 55.0% | |
| TGTCCTCTTTCTCTCGGGCA+TGG | + | chr1.4:7761058-7761077 | MS.gene058486:CDS | 55.0% | |
| ! | CCGGCCTTCTCAGTTCTGAT+AGG | + | chr1.4:7761686-7761705 | MS.gene058486:CDS | 55.0% |
| CCACCATGCCCGAGAGAAAG+AGG | - | chr1.4:7761064-7761083 | None:intergenic | 60.0% | |
| CCTCTTTCTCTCGGGCATGG+TGG | + | chr1.4:7761061-7761080 | MS.gene058486:CDS | 60.0% | |
| GGCAGATCCCTGAACAAGCG+TGG | + | chr1.4:7761654-7761673 | MS.gene058486:CDS | 60.0% | |
| !! | TCTCCCCGGTGTTGCACCAC+AGG | + | chr1.4:7757857-7757876 | MS.gene058486:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 7757783 | 7762120 | 7757783 | ID=MS.gene058486 |
| chr1.4 | mRNA | 7757783 | 7762120 | 7757783 | ID=MS.gene058486.t1;Parent=MS.gene058486 |
| chr1.4 | exon | 7757783 | 7757890 | 7757783 | ID=MS.gene058486.t1.exon1;Parent=MS.gene058486.t1 |
| chr1.4 | CDS | 7757783 | 7757890 | 7757783 | ID=cds.MS.gene058486.t1;Parent=MS.gene058486.t1 |
| chr1.4 | exon | 7759663 | 7759827 | 7759663 | ID=MS.gene058486.t1.exon2;Parent=MS.gene058486.t1 |
| chr1.4 | CDS | 7759663 | 7759827 | 7759663 | ID=cds.MS.gene058486.t1;Parent=MS.gene058486.t1 |
| chr1.4 | exon | 7759929 | 7760038 | 7759929 | ID=MS.gene058486.t1.exon3;Parent=MS.gene058486.t1 |
| chr1.4 | CDS | 7759929 | 7760038 | 7759929 | ID=cds.MS.gene058486.t1;Parent=MS.gene058486.t1 |
| chr1.4 | exon | 7760137 | 7760242 | 7760137 | ID=MS.gene058486.t1.exon4;Parent=MS.gene058486.t1 |
| chr1.4 | CDS | 7760137 | 7760242 | 7760137 | ID=cds.MS.gene058486.t1;Parent=MS.gene058486.t1 |
| chr1.4 | exon | 7760331 | 7760443 | 7760331 | ID=MS.gene058486.t1.exon5;Parent=MS.gene058486.t1 |
| chr1.4 | CDS | 7760331 | 7760443 | 7760331 | ID=cds.MS.gene058486.t1;Parent=MS.gene058486.t1 |
| chr1.4 | exon | 7760544 | 7760694 | 7760544 | ID=MS.gene058486.t1.exon6;Parent=MS.gene058486.t1 |
| chr1.4 | CDS | 7760544 | 7760694 | 7760544 | ID=cds.MS.gene058486.t1;Parent=MS.gene058486.t1 |
| chr1.4 | exon | 7760963 | 7762120 | 7760963 | ID=MS.gene058486.t1.exon7;Parent=MS.gene058486.t1 |
| chr1.4 | CDS | 7760963 | 7762120 | 7760963 | ID=cds.MS.gene058486.t1;Parent=MS.gene058486.t1 |
| Gene Sequence |
| Protein sequence |
