Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016086.t1 | XP_003588860.1 | 98.8 | 602 | 6 | 1 | 3 | 603 | 36 | 637 | 0.00E+00 | 1180.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016086.t1 | F4KIB2 | 85.7 | 603 | 84 | 1 | 3 | 603 | 46 | 648 | 4.9e-305 | 1047.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016086.t1 | G7I879 | 98.8 | 602 | 6 | 1 | 3 | 603 | 36 | 637 | 0.0e+00 | 1180.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene058486 | MS.gene016086 | PPI |
| MS.gene016086 | MS.gene36992 | PPI |
| MS.gene011190 | MS.gene016086 | PPI |
| MS.gene016086 | MS.gene020254 | PPI |
| MS.gene80184 | MS.gene016086 | PPI |
| MS.gene33117 | MS.gene016086 | PPI |
| MS.gene016086 | MS.gene036639 | PPI |
| MS.gene016086 | MS.gene041418 | PPI |
| MS.gene36990 | MS.gene016086 | PPI |
| MS.gene051485 | MS.gene016086 | PPI |
| MS.gene32702 | MS.gene016086 | PPI |
| MS.gene016086 | MS.gene57710 | PPI |
| MS.gene58761 | MS.gene016086 | PPI |
| MS.gene016086 | MS.gene42664 | PPI |
| MS.gene36542 | MS.gene016086 | PPI |
| MS.gene014910 | MS.gene016086 | PPI |
| MS.gene016086 | MS.gene80181 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016086.t1 | MTR_1g014080 | 98.837 | 602 | 6 | 1 | 3 | 603 | 36 | 637 | 0.0 | 1226 |
| MS.gene016086.t1 | MTR_3g105950 | 91.196 | 602 | 52 | 1 | 3 | 603 | 35 | 636 | 0.0 | 1122 |
| MS.gene016086.t1 | MTR_8g016270 | 76.373 | 601 | 141 | 1 | 4 | 603 | 48 | 648 | 0.0 | 968 |
| MS.gene016086.t1 | MTR_5g098730 | 45.696 | 639 | 290 | 14 | 3 | 603 | 46 | 665 | 5.88e-180 | 525 |
| MS.gene016086.t1 | MTR_3g082140 | 44.866 | 633 | 304 | 12 | 3 | 603 | 40 | 659 | 4.87e-178 | 519 |
| MS.gene016086.t1 | MTR_0204s0010 | 47.598 | 458 | 216 | 7 | 159 | 603 | 2 | 448 | 1.56e-148 | 436 |
| MS.gene016086.t1 | MTR_5g077170 | 32.949 | 607 | 355 | 8 | 3 | 603 | 31 | 591 | 2.61e-114 | 353 |
| MS.gene016086.t1 | MTR_6g074910 | 32.125 | 607 | 358 | 8 | 3 | 603 | 30 | 588 | 2.77e-111 | 345 |
| MS.gene016086.t1 | MTR_8g088730 | 33.279 | 613 | 343 | 9 | 3 | 603 | 31 | 589 | 6.60e-104 | 326 |
| MS.gene016086.t1 | MTR_2g006300 | 33.826 | 609 | 339 | 9 | 5 | 603 | 29 | 583 | 1.04e-101 | 320 |
| MS.gene016086.t1 | MTR_4g053270 | 30.298 | 604 | 365 | 9 | 4 | 601 | 34 | 587 | 8.49e-91 | 292 |
| MS.gene016086.t1 | MTR_7g060560 | 94.068 | 118 | 7 | 0 | 59 | 176 | 274 | 391 | 2.08e-71 | 235 |
| MS.gene016086.t1 | MTR_3g090510 | 93.750 | 112 | 7 | 0 | 65 | 176 | 283 | 394 | 4.12e-68 | 226 |
| MS.gene016086.t1 | MTR_5g014340 | 86.916 | 107 | 9 | 1 | 61 | 167 | 1 | 102 | 5.20e-49 | 171 |
| MS.gene016086.t1 | MTR_0249s0060 | 89.706 | 68 | 7 | 0 | 61 | 128 | 1 | 68 | 3.94e-30 | 113 |
| MS.gene016086.t1 | MTR_4g116770 | 42.857 | 161 | 80 | 5 | 4 | 161 | 37 | 188 | 4.19e-29 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016086.t1 | AT5G10840 | 85.738 | 603 | 84 | 1 | 3 | 603 | 46 | 648 | 0.0 | 1064 |
| MS.gene016086.t1 | AT5G25100 | 84.768 | 604 | 88 | 1 | 4 | 603 | 48 | 651 | 0.0 | 1056 |
| MS.gene016086.t1 | AT5G25100 | 84.628 | 605 | 89 | 1 | 3 | 603 | 40 | 644 | 0.0 | 1056 |
| MS.gene016086.t1 | AT2G24170 | 82.196 | 601 | 106 | 1 | 4 | 603 | 37 | 637 | 0.0 | 1030 |
| MS.gene016086.t1 | AT3G13772 | 76.451 | 603 | 139 | 3 | 3 | 603 | 40 | 641 | 0.0 | 968 |
| MS.gene016086.t1 | AT1G55130 | 74.627 | 603 | 150 | 3 | 3 | 603 | 36 | 637 | 0.0 | 946 |
| MS.gene016086.t1 | AT2G24170 | 78.155 | 412 | 89 | 1 | 4 | 414 | 37 | 448 | 0.0 | 689 |
| MS.gene016086.t1 | AT5G35160 | 45.016 | 642 | 291 | 13 | 4 | 603 | 37 | 658 | 0.0 | 530 |
| MS.gene016086.t1 | AT5G35160 | 45.016 | 642 | 291 | 13 | 4 | 603 | 37 | 658 | 0.0 | 530 |
| MS.gene016086.t1 | AT5G35160 | 45.016 | 642 | 291 | 13 | 4 | 603 | 37 | 658 | 0.0 | 530 |
| MS.gene016086.t1 | AT4G12650 | 45.110 | 634 | 301 | 13 | 3 | 603 | 33 | 652 | 3.22e-173 | 507 |
| MS.gene016086.t1 | AT5G35160 | 44.262 | 610 | 279 | 12 | 35 | 603 | 41 | 630 | 1.89e-166 | 489 |
| MS.gene016086.t1 | AT2G01970 | 33.717 | 608 | 348 | 8 | 3 | 603 | 33 | 592 | 1.06e-121 | 372 |
| MS.gene016086.t1 | AT1G14670 | 33.882 | 608 | 347 | 8 | 3 | 603 | 33 | 592 | 2.55e-114 | 353 |
| MS.gene016086.t1 | AT5G37310 | 32.566 | 608 | 353 | 7 | 4 | 603 | 35 | 593 | 3.56e-111 | 345 |
| MS.gene016086.t1 | AT5G37310 | 32.566 | 608 | 353 | 7 | 4 | 603 | 35 | 593 | 3.56e-111 | 345 |
| MS.gene016086.t1 | AT1G10950 | 34.328 | 603 | 332 | 9 | 11 | 603 | 41 | 589 | 3.61e-103 | 324 |
| MS.gene016086.t1 | AT1G08350 | 31.466 | 607 | 360 | 11 | 4 | 603 | 32 | 589 | 2.36e-100 | 317 |
| MS.gene016086.t1 | AT1G08350 | 31.466 | 607 | 360 | 11 | 4 | 603 | 32 | 589 | 2.36e-100 | 317 |
| MS.gene016086.t1 | AT1G08350 | 30.755 | 556 | 330 | 10 | 54 | 603 | 2 | 508 | 6.77e-87 | 280 |
| MS.gene016086.t1 | AT1G08350 | 30.811 | 555 | 319 | 11 | 4 | 551 | 32 | 528 | 4.67e-86 | 278 |
Find 133 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTTTGGCTTCCTCTTTC+TGG | 0.064189 | 1.2:+7998931 | MS.gene016086:CDS |
| ATCCTGATCCACACGCTTTA+TGG | 0.119105 | 1.2:-7997078 | None:intergenic |
| TCTCTTCTTGTGCTTCTTCC+TGG | 0.154377 | 1.2:-7998286 | None:intergenic |
| TTCATGTACCACGCTTGTTC+AGG | 0.250510 | 1.2:-7998806 | None:intergenic |
| TTGTATTGAATGGTCTGATA+TGG | 0.253856 | 1.2:+7998621 | MS.gene016086:CDS |
| CAATTGAGAACCAGTGAATT+TGG | 0.264042 | 1.2:-7998163 | None:intergenic |
| ACCATTCAATACAAAGAAAA+TGG | 0.292510 | 1.2:-7998612 | None:intergenic |
| GCTTTGAGGTTAAGCCATTC+AGG | 0.304144 | 1.2:+7997334 | MS.gene016086:CDS |
| CTCTTCTTGTGCTTCTTCCT+GGG | 0.310995 | 1.2:-7998285 | None:intergenic |
| AACCTCAAAGCCCACTATTC+TGG | 0.312174 | 1.2:-7997322 | None:intergenic |
| AACATGAATATGAAGGGAAA+TGG | 0.333966 | 1.2:+7997461 | MS.gene016086:CDS |
| TTGGTGGCTATGTTGGATTC+AGG | 0.340881 | 1.2:+7998732 | MS.gene016086:CDS |
| TCTTCATTCTCACCTCAATC+TGG | 0.353616 | 1.2:+7998891 | MS.gene016086:CDS |
| CACATATGATGTTGAATTCC+TGG | 0.357055 | 1.2:+7997585 | MS.gene016086:CDS |
| CTTGTTCAGGGATCTGCCTT+GGG | 0.361865 | 1.2:-7998793 | None:intergenic |
| TTCAACTTCTTGAGGAGTAT+TGG | 0.372089 | 1.2:-7997542 | None:intergenic |
| CACACAACATTGCACATTTG+TGG | 0.372808 | 1.2:-7996856 | None:intergenic |
| ACAATGCTCTTTGCTGTCCT+TGG | 0.391461 | 1.2:+7998416 | MS.gene016086:CDS |
| TATGCCTTCTTTGTTGTAAC+CGG | 0.395161 | 1.2:+7999175 | MS.gene016086:CDS |
| TCATCTGGAGCTGTGCCATT+TGG | 0.398656 | 1.2:+7998653 | MS.gene016086:CDS |
| GATGATTGTCCTCTTTCTCT+CGG | 0.399152 | 1.2:+7998196 | MS.gene016086:CDS |
| GATTCTAGATAACCTTCCTT+TGG | 0.407859 | 1.2:+7997049 | MS.gene016086:CDS |
| TCCCATAAAGCGTGTGGATC+AGG | 0.408601 | 1.2:+7997076 | MS.gene016086:CDS |
| CACTGAATCTGCCAGAATAG+TGG | 0.409116 | 1.2:+7997311 | MS.gene016086:CDS |
| TCCTGATCCACACGCTTTAT+GGG | 0.409906 | 1.2:-7997077 | None:intergenic |
| TTGTGTGTTTATGTTGGTAC+TGG | 0.410260 | 1.2:+7998365 | MS.gene016086:CDS |
| CCGGCCTTCTCAGTTCTGAT+AGG | 0.413755 | 1.2:+7998830 | MS.gene016086:CDS |
| CAACTTCGTGATTTCAAGCT+TGG | 0.416283 | 1.2:-7999110 | None:intergenic |
| TATTGAAAATTCACGTTATG+TGG | 0.420978 | 1.2:+7996718 | MS.gene016086:CDS |
| GATTCTACTGTTTATCAGCT+TGG | 0.421408 | 1.2:+7997098 | MS.gene016086:CDS |
| AGTAATCCTCACTGCACAAC+TGG | 0.425366 | 1.2:-7999009 | None:intergenic |
| ACATGAATATGAAGGGAAAT+GGG | 0.426030 | 1.2:+7997462 | MS.gene016086:CDS |
| ATTAGCCCACCTCTGTTTGA+AGG | 0.427160 | 1.2:-7998449 | None:intergenic |
| GCTTGTTCAGGGATCTGCCT+TGG | 0.428645 | 1.2:-7998794 | None:intergenic |
| TGCCAGAATAGTGGGCTTTG+AGG | 0.438212 | 1.2:+7997320 | MS.gene016086:CDS |
| CACAACAGATCTGAGTTGTT+TGG | 0.439121 | 1.2:-7998347 | None:intergenic |
| TTGGATAGTGCTGAAAATCT+TGG | 0.448087 | 1.2:+7996674 | MS.gene016086:CDS |
| TGTATTGAATGGTCTGATAT+GGG | 0.449462 | 1.2:+7998622 | MS.gene016086:CDS |
| TTTGTTGTAACCGGCACCAT+TGG | 0.456580 | 1.2:+7999184 | MS.gene016086:CDS |
| GGAAGTGAATAATATGTGTA+TGG | 0.459005 | 1.2:-7996629 | None:intergenic |
| ATATGGGGACAAAAGTCATC+TGG | 0.459129 | 1.2:+7998638 | MS.gene016086:CDS |
| TATCAGCTTGGTTTCCATGT+TGG | 0.460613 | 1.2:+7997110 | MS.gene016086:CDS |
| CGGCCTTCTCAGTTCTGATA+GGG | 0.462225 | 1.2:+7998831 | MS.gene016086:CDS |
| GTCATCATTCATCAGCAGAT+AGG | 0.462860 | 1.2:-7998141 | None:intergenic |
| TGTCCTCTTTCTCTCGGGCA+TGG | 0.464468 | 1.2:+7998202 | MS.gene016086:CDS |
| ATGATTGTCCTCTTTCTCTC+GGG | 0.466449 | 1.2:+7998197 | MS.gene016086:CDS |
| AATAATATGTGTATGGAAGC+TGG | 0.475548 | 1.2:-7996622 | None:intergenic |
| TGGCGCTCTTACCTCACATC+TGG | 0.475574 | 1.2:+7999040 | MS.gene016086:CDS |
| TTTCCCTCTTCAACTTCTTG+AGG | 0.477051 | 1.2:-7997550 | None:intergenic |
| ATTCCAATATTACATGGTGC+AGG | 0.478776 | 1.2:+7996553 | None:intergenic |
| TCAATGAAAACAGCTCCAAA+TGG | 0.478934 | 1.2:-7998863 | None:intergenic |
| GAAGATTGATGATGAGTATC+GGG | 0.480629 | 1.2:+7996921 | MS.gene016086:CDS |
| GACAGCTATGCTCTTGCTAT+GGG | 0.482841 | 1.2:+7998472 | MS.gene016086:CDS |
| AAAATGGCAGAGACAGAGGC+AGG | 0.487505 | 1.2:-7998596 | None:intergenic |
| GGTTTCCATGTTGGACTCAA+AGG | 0.490497 | 1.2:+7997119 | MS.gene016086:CDS |
| TGACAGCTATGCTCTTGCTA+TGG | 0.490539 | 1.2:+7998471 | MS.gene016086:CDS |
| TCATGTACCACGCTTGTTCA+GGG | 0.491346 | 1.2:-7998805 | None:intergenic |
| AGAATGTTGCATAAAGAAAG+AGG | 0.493377 | 1.2:-7999078 | None:intergenic |
| CCACCATGCCCGAGAGAAAG+AGG | 0.498120 | 1.2:-7998205 | None:intergenic |
| CTTTCTCCTTCAAACAGAGG+TGG | 0.502130 | 1.2:+7998443 | MS.gene016086:CDS |
| GATCTGTTGTGTGTTTATGT+TGG | 0.504784 | 1.2:+7998359 | MS.gene016086:CDS |
| CACCTCTGTTTGAAGGAGAA+AGG | 0.505594 | 1.2:-7998442 | None:intergenic |
| GACAACTGTATGTTTAGCAT+GGG | 0.507896 | 1.2:-7997515 | None:intergenic |
| GGACTCAAAGGACAATATAG+TGG | 0.508903 | 1.2:+7997131 | MS.gene016086:CDS |
| CAATGAAAACAGCTCCAAAT+GGG | 0.511643 | 1.2:-7998862 | None:intergenic |
| AGTGTTAAACATGAATATGA+AGG | 0.511795 | 1.2:+7997454 | MS.gene016086:intron |
| AGAAGATTGATGATGAGTAT+CGG | 0.514607 | 1.2:+7996920 | MS.gene016086:CDS |
| CGCTTTATGGGAACAACCAA+AGG | 0.515207 | 1.2:-7997065 | None:intergenic |
| AGAGCAAACATTGTTCCAAA+TGG | 0.527819 | 1.2:-7998668 | None:intergenic |
| CCTATCAGAACTGAGAAGGC+CGG | 0.533053 | 1.2:-7998830 | None:intergenic |
| TTTCTCCTTCAAACAGAGGT+GGG | 0.533866 | 1.2:+7998444 | MS.gene016086:CDS |
| CTATCAGAACTGAGAAGGCC+GGG | 0.534233 | 1.2:-7998829 | None:intergenic |
| GTACAATGAGCTTGAGACCC+AGG | 0.535219 | 1.2:+7998268 | MS.gene016086:CDS |
| GACTCAAAGGACAATATAGT+GGG | 0.535283 | 1.2:+7997132 | MS.gene016086:CDS |
| AAGCACAAGAAGAGACTGGT+TGG | 0.539709 | 1.2:+7998294 | MS.gene016086:CDS |
| TGCGTAAAATCCAATGGTGC+CGG | 0.543229 | 1.2:-7999194 | None:intergenic |
| TCAAGAAGTTGAAGAGGGAA+AGG | 0.543806 | 1.2:+7997552 | MS.gene016086:CDS |
| GTATCTGCAATATTATACTT+CGG | 0.545739 | 1.2:+7999133 | MS.gene016086:CDS |
| TGACAACTGTATGTTTAGCA+TGG | 0.550993 | 1.2:-7997516 | None:intergenic |
| ACTGAATCTGCCAGAATAGT+GGG | 0.555697 | 1.2:+7997312 | MS.gene016086:CDS |
| ATTTGACAGTAAATGCCAAA+TGG | 0.557238 | 1.2:-7997272 | None:intergenic |
| GGTTGTTCCCATAAAGCGTG+TGG | 0.557317 | 1.2:+7997070 | MS.gene016086:CDS |
| CATTGTACTTTGAAATATCA+CGG | 0.557682 | 1.2:-7998253 | None:intergenic |
| AACAGATCTGAGTTGTTTGG+TGG | 0.557705 | 1.2:-7998344 | None:intergenic |
| GGATGACGAAGACCAGAAAG+AGG | 0.558905 | 1.2:-7998943 | None:intergenic |
| CGCTTATACAAAATGTTCAA+AGG | 0.560242 | 1.2:+7998530 | MS.gene016086:CDS |
| ATGTGAAGTGGGCTTCAAGA+TGG | 0.563049 | 1.2:+7998114 | MS.gene016086:CDS |
| AAACTGATTCAACCAGATTG+AGG | 0.568595 | 1.2:-7998903 | None:intergenic |
| TTCCTTTCTCCTTCAAACAG+AGG | 0.571385 | 1.2:+7998440 | MS.gene016086:CDS |
| TACTCCTCAAGAAGTTGAAG+AGG | 0.574236 | 1.2:+7997546 | MS.gene016086:CDS |
| GAAGAAGCACAAGAAGAGAC+TGG | 0.580291 | 1.2:+7998290 | MS.gene016086:CDS |
| CAAGCTTGAAATCACGAAGT+TGG | 0.580482 | 1.2:+7999111 | MS.gene016086:CDS |
| GTGAGGATTACTTGTGGTGG+TGG | 0.581791 | 1.2:+7999020 | MS.gene016086:CDS |
| AGTGGAAGAAAATTTCCCTC+AGG | 0.592786 | 1.2:+7998558 | MS.gene016086:CDS |
| CACAGACATACAGACCTGAA+TGG | 0.593857 | 1.2:-7997348 | None:intergenic |
| GAACAAGACTGCAGTCCTGA+GGG | 0.595951 | 1.2:-7998573 | None:intergenic |
| ATAATATGTGTATGGAAGCT+GGG | 0.597147 | 1.2:-7996621 | None:intergenic |
| AAAGAAAATGGCAGAGACAG+AGG | 0.604759 | 1.2:-7998600 | None:intergenic |
| ACAACTGTATGTTTAGCATG+GGG | 0.606268 | 1.2:-7997514 | None:intergenic |
| TTCCAATATTACATGGTGCA+GGG | 0.609018 | 1.2:+7996554 | None:intergenic |
| TGTGAAGTGGGCTTCAAGAT+GGG | 0.611136 | 1.2:+7998115 | MS.gene016086:CDS |
| GCCTTCTCAGTTCTGATAGG+GGG | 0.611204 | 1.2:+7998833 | MS.gene016086:CDS |
| GTGTTAAACATGAATATGAA+GGG | 0.614070 | 1.2:+7997455 | MS.gene016086:intron |
| GGCCTTCTCAGTTCTGATAG+GGG | 0.615040 | 1.2:+7998832 | MS.gene016086:CDS |
| CTACTTCCAGTTGTGCAGTG+AGG | 0.617050 | 1.2:+7999003 | MS.gene016086:CDS |
| TTGAAGGAGAAAGGAATCCA+AGG | 0.617531 | 1.2:-7998433 | None:intergenic |
| GGTGCCGGTTACAACAAAGA+AGG | 0.620039 | 1.2:-7999179 | None:intergenic |
| TTATGGGAACAACCAAAGGA+AGG | 0.622552 | 1.2:-7997061 | None:intergenic |
| ATTGTCCTTTGAGTCCAACA+TGG | 0.625666 | 1.2:-7997124 | None:intergenic |
| ACTCCTCAAGAAGTTGAAGA+GGG | 0.626156 | 1.2:+7997547 | MS.gene016086:CDS |
| TGCAGGAGAGTGATGTGAAG+TGG | 0.630793 | 1.2:+7998102 | MS.gene016086:intron |
| TGAATGATGACCAAATTCAC+TGG | 0.630891 | 1.2:+7998153 | MS.gene016086:CDS |
| AAAGCATGCGTAAAATCCAA+TGG | 0.631715 | 1.2:-7999200 | None:intergenic |
| GGAACAAGACTGCAGTCCTG+AGG | 0.632360 | 1.2:-7998574 | None:intergenic |
| CCTCTTTCTCTCGGGCATGG+TGG | 0.636806 | 1.2:+7998205 | MS.gene016086:CDS |
| TGAAAACAAACAAAATCCCA+AGG | 0.637171 | 1.2:+7998777 | MS.gene016086:CDS |
| GTATTGAATGGTCTGATATG+GGG | 0.638197 | 1.2:+7998623 | MS.gene016086:CDS |
| GGCAGATCCCTGAACAAGCG+TGG | 0.641948 | 1.2:+7998798 | MS.gene016086:CDS |
| GCAGGAGAGTGATGTGAAGT+GGG | 0.642804 | 1.2:+7998103 | MS.gene016086:intron |
| ACTGGTTGGAAGCTTGTCCA+TGG | 0.644200 | 1.2:+7998308 | MS.gene016086:CDS |
| ACAAGCGTGGTACATGAACC+CGG | 0.649898 | 1.2:+7998811 | MS.gene016086:CDS |
| GCAGTGAGGATTACTTGTGG+TGG | 0.656188 | 1.2:+7999017 | MS.gene016086:CDS |
| AAATGGCAGAGACAGAGGCA+GGG | 0.659868 | 1.2:-7998595 | None:intergenic |
| GTGCAGAAGAGCCAGATGTG+AGG | 0.677656 | 1.2:-7999051 | None:intergenic |
| AAATGTTCAAAGGATCAGAG+TGG | 0.690463 | 1.2:+7998540 | MS.gene016086:CDS |
| TGTGCAGTGAGGATTACTTG+TGG | 0.692738 | 1.2:+7999014 | MS.gene016086:CDS |
| CAACTGTATGTTTAGCATGG+GGG | 0.696889 | 1.2:-7997513 | None:intergenic |
| TTTCTGCACAAGTGATAACG+AGG | 0.700675 | 1.2:-7998964 | None:intergenic |
| TTGAAATACACAGAGCAAGG+AGG | 0.723557 | 1.2:+7997230 | MS.gene016086:intron |
| TGTGTGTAAGCTTAAAGTTG+AGG | 0.748545 | 1.2:+7996873 | MS.gene016086:CDS |
| ACTCAAAGGACAATATAGTG+GGG | 0.752368 | 1.2:+7997133 | MS.gene016086:CDS |
| CTGGAAGTAGCAAAGCACGA+CGG | 0.762251 | 1.2:-7998990 | None:intergenic |
| AATCTTGGAGAAGTGCTCCG+TGG | 0.794103 | 1.2:+7996689 | MS.gene016086:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr1.2:7997860-7997879 | MS.gene016086:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr1.2:7997859-7997878 | MS.gene016086:intron | 10.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr1.2:7997861-7997880 | MS.gene016086:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr1.2:7997924-7997943 | MS.gene016086:intron | 15.0% |
| !!! | TATTCTTCTCTAATTATTTT+TGG | + | chr1.2:7997736-7997755 | MS.gene016086:intron | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr1.2:7997884-7997903 | MS.gene016086:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+AGG | + | chr1.2:7997958-7997977 | MS.gene016086:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+TGG | + | chr1.2:7997994-7998013 | MS.gene016086:intron | 20.0% |
| ! | AAACCATATATTTAACCACT+TGG | - | chr1.2:7997678-7997697 | None:intergenic | 25.0% |
| ! | AAGTGGTTAAATATATGGTT+TGG | + | chr1.2:7997677-7997696 | MS.gene016086:intron | 25.0% |
| ! | ACCATTCAATACAAAGAAAA+TGG | - | chr1.2:7998615-7998634 | None:intergenic | 25.0% |
| ! | AGTGGTTAAATATATGGTTT+GGG | + | chr1.2:7997678-7997697 | MS.gene016086:intron | 25.0% |
| ! | AGTGTTAAACATGAATATGA+AGG | + | chr1.2:7997454-7997473 | MS.gene016086:intron | 25.0% |
| ! | CACAAGAAGAAGAAAAAAAT+TGG | - | chr1.2:7997201-7997220 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr1.2:7997883-7997902 | MS.gene016086:intron | 25.0% |
| ! | GGAAATATAAGACAATTTAC+TGG | - | chr1.2:7996964-7996983 | None:intergenic | 25.0% |
| ! | GTATCTGCAATATTATACTT+CGG | + | chr1.2:7999133-7999152 | MS.gene016086:CDS | 25.0% |
| ! | GTGTTAAACATGAATATGAA+GGG | + | chr1.2:7997455-7997474 | MS.gene016086:intron | 25.0% |
| ! | GTGTTATATTGTATTGGAAA+TGG | + | chr1.2:7997930-7997949 | MS.gene016086:intron | 25.0% |
| ! | TAAATTGTCTTATATTTCCG+TGG | + | chr1.2:7996965-7996984 | MS.gene016086:intron | 25.0% |
| ! | TATTGAAAATTCACGTTATG+TGG | + | chr1.2:7996718-7996737 | MS.gene016086:CDS | 25.0% |
| !! | AATCAGTTTTACTACATCTT+TGG | + | chr1.2:7998917-7998936 | MS.gene016086:CDS | 25.0% |
| !! | CTTTGAACATTTTGTATAAG+CGG | - | chr1.2:7998532-7998551 | None:intergenic | 25.0% |
| !! | TTGAAATAGGTCAGTTATTT+TGG | + | chr1.2:7997971-7997990 | MS.gene016086:intron | 25.0% |
| !! | TTTGAACATTTTGTATAAGC+GGG | - | chr1.2:7998531-7998550 | None:intergenic | 25.0% |
| !!! | ATTTTAGTGAAAGATGATGA+TGG | + | chr1.2:7998045-7998064 | MS.gene016086:intron | 25.0% |
| !!! | CATTGTACTTTGAAATATCA+CGG | - | chr1.2:7998256-7998275 | None:intergenic | 25.0% |
| !!! | GTTTTTTATACACAACCATT+TGG | + | chr1.2:7997257-7997276 | MS.gene016086:CDS | 25.0% |
| !!! | TATGCATTCTTACTGATTTT+CGG | + | chr1.2:7997413-7997432 | MS.gene016086:intron | 25.0% |
| !!! | TGAAATAGGTCAGTTATTTT+GGG | + | chr1.2:7997972-7997991 | MS.gene016086:intron | 25.0% |
| AACATGAATATGAAGGGAAA+TGG | + | chr1.2:7997461-7997480 | MS.gene016086:CDS | 30.0% | |
| AATAATATGTGTATGGAAGC+TGG | - | chr1.2:7996625-7996644 | None:intergenic | 30.0% | |
| ACATGAATATGAAGGGAAAT+GGG | + | chr1.2:7997462-7997481 | MS.gene016086:CDS | 30.0% | |
| AGAAAATTGGTCAGTTATTC+CGG | + | chr1.2:7998007-7998026 | MS.gene016086:intron | 30.0% | |
| AGAATGTTGCATAAAGAAAG+AGG | - | chr1.2:7999081-7999100 | None:intergenic | 30.0% | |
| ATAATATGTGTATGGAAGCT+GGG | - | chr1.2:7996624-7996643 | None:intergenic | 30.0% | |
| ATGCCAAGTGGTTAAATATA+TGG | + | chr1.2:7997672-7997691 | MS.gene016086:intron | 30.0% | |
| ATTTGACAGTAAATGCCAAA+TGG | - | chr1.2:7997275-7997294 | None:intergenic | 30.0% | |
| CGCTTATACAAAATGTTCAA+AGG | + | chr1.2:7998530-7998549 | MS.gene016086:CDS | 30.0% | |
| GACATGTTATTGTTAACACT+TGG | + | chr1.2:7996753-7996772 | MS.gene016086:intron | 30.0% | |
| GATCTTCAATATCAAGATAG+TGG | - | chr1.2:7997001-7997020 | None:intergenic | 30.0% | |
| GGAAGTGAATAATATGTGTA+TGG | - | chr1.2:7996632-7996651 | None:intergenic | 30.0% | |
| TACTACGTTTGAATACCTAT+TGG | + | chr1.2:7997642-7997661 | MS.gene016086:intron | 30.0% | |
| TGAAAACAAACAAAATCCCA+AGG | + | chr1.2:7998777-7998796 | MS.gene016086:CDS | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr1.2:7997868-7997887 | MS.gene016086:intron | 30.0% | |
| TGTATTGAATGGTCTGATAT+GGG | + | chr1.2:7998622-7998641 | MS.gene016086:CDS | 30.0% | |
| TTGTATTGAATGGTCTGATA+TGG | + | chr1.2:7998621-7998640 | MS.gene016086:CDS | 30.0% | |
| TTTATTAAGATGATCTCACC+AGG | - | chr1.2:7997606-7997625 | None:intergenic | 30.0% | |
| ! | AATTTTCAATACGATCACCA+CGG | - | chr1.2:7996709-7996728 | None:intergenic | 30.0% |
| ! | TGTTTGCTCTGATCTTTTTA+TGG | + | chr1.2:7998681-7998700 | MS.gene016086:CDS | 30.0% |
| ! | TTTGAATGCTTTTGCAGTTT+TGG | - | chr1.2:7996899-7996918 | None:intergenic | 30.0% |
| !! | AGAAGATTGATGATGAGTAT+CGG | + | chr1.2:7996920-7996939 | MS.gene016086:CDS | 30.0% |
| !! | GCCATTTTCTTTGTATTGAA+TGG | + | chr1.2:7998611-7998630 | MS.gene016086:CDS | 30.0% |
| !!! | ACTATCCAAGATTTTTTCTG+GGG | - | chr1.2:7996663-7996682 | None:intergenic | 30.0% |
| !!! | CACTATCCAAGATTTTTTCT+GGG | - | chr1.2:7996664-7996683 | None:intergenic | 30.0% |
| AAAGCATGCGTAAAATCCAA+TGG | - | chr1.2:7999203-7999222 | None:intergenic | 35.0% | |
| AAATGTTCAAAGGATCAGAG+TGG | + | chr1.2:7998540-7998559 | MS.gene016086:CDS | 35.0% | |
| ACAACTGTATGTTTAGCATG+GGG | - | chr1.2:7997517-7997536 | None:intergenic | 35.0% | |
| ACTCAAAGGACAATATAGTG+GGG | + | chr1.2:7997133-7997152 | MS.gene016086:CDS | 35.0% | |
| AGAGCAAACATTGTTCCAAA+TGG | - | chr1.2:7998671-7998690 | None:intergenic | 35.0% | |
| AGAGGTCAAATAAATTGGGA+CGG | - | chr1.2:7997820-7997839 | None:intergenic | 35.0% | |
| AGCCAAGAGGTCAAATAAAT+TGG | - | chr1.2:7997825-7997844 | None:intergenic | 35.0% | |
| ATGTTGAAATACACAGAGCA+AGG | + | chr1.2:7997227-7997246 | MS.gene016086:intron | 35.0% | |
| CAATGAAAACAGCTCCAAAT+GGG | - | chr1.2:7998865-7998884 | None:intergenic | 35.0% | |
| CAATTGAGAACCAGTGAATT+TGG | - | chr1.2:7998166-7998185 | None:intergenic | 35.0% | |
| CACATATGATGTTGAATTCC+TGG | + | chr1.2:7997585-7997604 | MS.gene016086:CDS | 35.0% | |
| GAAAATTGGTCAGTTATTCC+GGG | + | chr1.2:7998008-7998027 | MS.gene016086:intron | 35.0% | |
| GACAACTGTATGTTTAGCAT+GGG | - | chr1.2:7997518-7997537 | None:intergenic | 35.0% | |
| GACTCAAAGGACAATATAGT+GGG | + | chr1.2:7997132-7997151 | MS.gene016086:CDS | 35.0% | |
| GAGGGAGTAACAATAACAAT+TGG | - | chr1.2:7997798-7997817 | None:intergenic | 35.0% | |
| GATCTGTTGTGTGTTTATGT+TGG | + | chr1.2:7998359-7998378 | MS.gene016086:CDS | 35.0% | |
| GATTCTACTGTTTATCAGCT+TGG | + | chr1.2:7997098-7997117 | MS.gene016086:CDS | 35.0% | |
| GATTCTAGATAACCTTCCTT+TGG | + | chr1.2:7997049-7997068 | MS.gene016086:CDS | 35.0% | |
| GCCAAGAGGTCAAATAAATT+GGG | - | chr1.2:7997824-7997843 | None:intergenic | 35.0% | |
| GTATTGAATGGTCTGATATG+GGG | + | chr1.2:7998623-7998642 | MS.gene016086:CDS | 35.0% | |
| TCAATGAAAACAGCTCCAAA+TGG | - | chr1.2:7998866-7998885 | None:intergenic | 35.0% | |
| TCCCAATTTATTTGACCTCT+TGG | + | chr1.2:7997820-7997839 | MS.gene016086:intron | 35.0% | |
| TGAATGATGACCAAATTCAC+TGG | + | chr1.2:7998153-7998172 | MS.gene016086:CDS | 35.0% | |
| TGACAACTGTATGTTTAGCA+TGG | - | chr1.2:7997519-7997538 | None:intergenic | 35.0% | |
| TGTGTGTAAGCTTAAAGTTG+AGG | + | chr1.2:7996873-7996892 | MS.gene016086:CDS | 35.0% | |
| TGTTATTGTTAACACTTGGC+TGG | + | chr1.2:7996757-7996776 | MS.gene016086:intron | 35.0% | |
| TTGTGTGTTTATGTTGGTAC+TGG | + | chr1.2:7998365-7998384 | MS.gene016086:CDS | 35.0% | |
| ! | AAACTGATTCAACCAGATTG+AGG | - | chr1.2:7998906-7998925 | None:intergenic | 35.0% |
| ! | GCTCTGATCTTTTTATGGTT+TGG | + | chr1.2:7998686-7998705 | MS.gene016086:CDS | 35.0% |
| ! | GGTTAAATATATGGTTTGGG+CGG | + | chr1.2:7997681-7997700 | MS.gene016086:intron | 35.0% |
| ! | TATGCCTTCTTTGTTGTAAC+CGG | + | chr1.2:7999175-7999194 | MS.gene016086:CDS | 35.0% |
| ! | TTCAACTTCTTGAGGAGTAT+TGG | - | chr1.2:7997545-7997564 | None:intergenic | 35.0% |
| ! | TTCACAGGATTTTCAATTGC+AGG | - | chr1.2:7998761-7998780 | None:intergenic | 35.0% |
| ! | TTGGATAGTGCTGAAAATCT+TGG | + | chr1.2:7996674-7996693 | MS.gene016086:CDS | 35.0% |
| ! | TTGGATTTTACGCATGCTTT+TGG | + | chr1.2:7999203-7999222 | MS.gene016086:CDS | 35.0% |
| !! | GAAGATTGATGATGAGTATC+GGG | + | chr1.2:7996921-7996940 | MS.gene016086:CDS | 35.0% |
| !! | GGGATTTTGTTTGTTTTCAC+AGG | - | chr1.2:7998776-7998795 | None:intergenic | 35.0% |
| !! | TTGTCCATGGTGATGTTTTT+AGG | + | chr1.2:7998321-7998340 | MS.gene016086:CDS | 35.0% |
| !!! | ATTTTTTCTGGGGGACAATA+AGG | - | chr1.2:7996653-7996672 | None:intergenic | 35.0% |
| !!! | CTATCCAAGATTTTTTCTGG+GGG | - | chr1.2:7996662-7996681 | None:intergenic | 35.0% |
| !!! | GCACTATCCAAGATTTTTTC+TGG | - | chr1.2:7996665-7996684 | None:intergenic | 35.0% |
| !!! | GTACTGGTGTTCAGTTTTTT+GGG | + | chr1.2:7998381-7998400 | MS.gene016086:CDS | 35.0% |
| !!! | TCAGTTCCACTTGTTTTTGT+TGG | + | chr1.2:7998713-7998732 | MS.gene016086:CDS | 35.0% |
| AAAGAAAATGGCAGAGACAG+AGG | - | chr1.2:7998603-7998622 | None:intergenic | 40.0% | |
| AACAGATCTGAGTTGTTTGG+TGG | - | chr1.2:7998347-7998366 | None:intergenic | 40.0% | |
| ACTCCTCAAGAAGTTGAAGA+GGG | + | chr1.2:7997547-7997566 | MS.gene016086:CDS | 40.0% | |
| ACTGAATCTGCCAGAATAGT+GGG | + | chr1.2:7997312-7997331 | MS.gene016086:CDS | 40.0% | |
| AGTGGAAGAAAATTTCCCTC+AGG | + | chr1.2:7998558-7998577 | MS.gene016086:CDS | 40.0% | |
| ATAGTGGCAGAAAATAGCCA+CGG | - | chr1.2:7996985-7997004 | None:intergenic | 40.0% | |
| ATATGGGGACAAAAGTCATC+TGG | + | chr1.2:7998638-7998657 | MS.gene016086:CDS | 40.0% | |
| ATGATTGTCCTCTTTCTCTC+GGG | + | chr1.2:7998197-7998216 | MS.gene016086:CDS | 40.0% | |
| ATTGTCCTTTGAGTCCAACA+TGG | - | chr1.2:7997127-7997146 | None:intergenic | 40.0% | |
| CAACTGTATGTTTAGCATGG+GGG | - | chr1.2:7997516-7997535 | None:intergenic | 40.0% | |
| CAACTTCGTGATTTCAAGCT+TGG | - | chr1.2:7999113-7999132 | None:intergenic | 40.0% | |
| CAAGCTTGAAATCACGAAGT+TGG | + | chr1.2:7999111-7999130 | MS.gene016086:CDS | 40.0% | |
| CACAACAGATCTGAGTTGTT+TGG | - | chr1.2:7998350-7998369 | None:intergenic | 40.0% | |
| CACACAACATTGCACATTTG+TGG | - | chr1.2:7996859-7996878 | None:intergenic | 40.0% | |
| GATAATTGTGTTGTGGTCAG+TGG | + | chr1.2:7996779-7996798 | MS.gene016086:intron | 40.0% | |
| GATGATTGTCCTCTTTCTCT+CGG | + | chr1.2:7998196-7998215 | MS.gene016086:CDS | 40.0% | |
| GGACTCAAAGGACAATATAG+TGG | + | chr1.2:7997131-7997150 | MS.gene016086:CDS | 40.0% | |
| GTAAGAATGCATACCACAAC+TGG | - | chr1.2:7997406-7997425 | None:intergenic | 40.0% | |
| GTCAAATAAATTGGGACGGA+GGG | - | chr1.2:7997816-7997835 | None:intergenic | 40.0% | |
| GTCATCATTCATCAGCAGAT+AGG | - | chr1.2:7998144-7998163 | None:intergenic | 40.0% | |
| TACTCCTCAAGAAGTTGAAG+AGG | + | chr1.2:7997546-7997565 | MS.gene016086:CDS | 40.0% | |
| TAGCCACCAACAAAAACAAG+TGG | - | chr1.2:7998722-7998741 | None:intergenic | 40.0% | |
| TATCAGCTTGGTTTCCATGT+TGG | + | chr1.2:7997110-7997129 | MS.gene016086:CDS | 40.0% | |
| TCAAGAAGTTGAAGAGGGAA+AGG | + | chr1.2:7997552-7997571 | MS.gene016086:CDS | 40.0% | |
| TCTTCATTCTCACCTCAATC+TGG | + | chr1.2:7998891-7998910 | MS.gene016086:CDS | 40.0% | |
| TTATGGGAACAACCAAAGGA+AGG | - | chr1.2:7997064-7997083 | None:intergenic | 40.0% | |
| TTCCTTTCTCCTTCAAACAG+AGG | + | chr1.2:7998440-7998459 | MS.gene016086:CDS | 40.0% | |
| TTGAAATACACAGAGCAAGG+AGG | + | chr1.2:7997230-7997249 | MS.gene016086:intron | 40.0% | |
| TTGAAGGAGAAAGGAATCCA+AGG | - | chr1.2:7998436-7998455 | None:intergenic | 40.0% | |
| TTGGCTGGATAATTGTGTTG+TGG | + | chr1.2:7996772-7996791 | MS.gene016086:intron | 40.0% | |
| TTGTCCCCCAGAAAAAATCT+TGG | + | chr1.2:7996655-7996674 | MS.gene016086:CDS | 40.0% | |
| TTTCCCTCTTCAACTTCTTG+AGG | - | chr1.2:7997553-7997572 | None:intergenic | 40.0% | |
| TTTCTCCTTCAAACAGAGGT+GGG | + | chr1.2:7998444-7998463 | MS.gene016086:CDS | 40.0% | |
| ! | GTTTTCATGGGGATTTTTGC+TGG | + | chr1.2:7998494-7998513 | MS.gene016086:CDS | 40.0% |
| ! | TCTAGAATCCTGCACATAGA+AGG | - | chr1.2:7997038-7997057 | None:intergenic | 40.0% |
| ! | TTTCTGCACAAGTGATAACG+AGG | - | chr1.2:7998967-7998986 | None:intergenic | 40.0% |
| !! | CTCTTGCTATGGGTTTTCAT+GGG | + | chr1.2:7998482-7998501 | MS.gene016086:CDS | 40.0% |
| !! | TCTTGCTATGGGTTTTCATG+GGG | + | chr1.2:7998483-7998502 | MS.gene016086:CDS | 40.0% |
| !!! | GGTACTGGTGTTCAGTTTTT+TGG | + | chr1.2:7998380-7998399 | MS.gene016086:CDS | 40.0% |
| !!! | GTTCCACTTGTTTTTGTTGG+TGG | + | chr1.2:7998716-7998735 | MS.gene016086:CDS | 40.0% |
| !!! | GTTTTTGTTGGTGGCTATGT+TGG | + | chr1.2:7998725-7998744 | MS.gene016086:CDS | 40.0% |
| AAATAATACTCCCTCCGTCC+CGG | - | chr1.2:7998029-7998048 | None:intergenic | 45.0% | |
| AACCTCAAAGCCCACTATTC+TGG | - | chr1.2:7997325-7997344 | None:intergenic | 45.0% | |
| AAGCACAAGAAGAGACTGGT+TGG | + | chr1.2:7998294-7998313 | MS.gene016086:CDS | 45.0% | |
| AGTAATCCTCACTGCACAAC+TGG | - | chr1.2:7999012-7999031 | None:intergenic | 45.0% | |
| ATAGGGGGAATACTCCCATT+TGG | + | chr1.2:7998848-7998867 | MS.gene016086:CDS | 45.0% | |
| ATCCTGATCCACACGCTTTA+TGG | - | chr1.2:7997081-7997100 | None:intergenic | 45.0% | |
| ATCCTGCACATAGAAGGTAG+AGG | - | chr1.2:7997032-7997051 | None:intergenic | 45.0% | |
| ATTAGCCCACCTCTGTTTGA+AGG | - | chr1.2:7998452-7998471 | None:intergenic | 45.0% | |
| ATTGGTCAGTTATTCCGGGA+CGG | + | chr1.2:7998012-7998031 | MS.gene016086:intron | 45.0% | |
| ATTTACCTCTGCCTACTTGC+AGG | + | chr1.2:7998085-7998104 | MS.gene016086:intron | 45.0% | |
| CACAGACATACAGACCTGAA+TGG | - | chr1.2:7997351-7997370 | None:intergenic | 45.0% | |
| CACCTCTGTTTGAAGGAGAA+AGG | - | chr1.2:7998445-7998464 | None:intergenic | 45.0% | |
| CACTGAATCTGCCAGAATAG+TGG | + | chr1.2:7997311-7997330 | MS.gene016086:CDS | 45.0% | |
| CGCTTTATGGGAACAACCAA+AGG | - | chr1.2:7997068-7997087 | None:intergenic | 45.0% | |
| CTCTTCTTGTGCTTCTTCCT+GGG | - | chr1.2:7998288-7998307 | None:intergenic | 45.0% | |
| CTTGGCATATGCAAGCCAAT+AGG | - | chr1.2:7997660-7997679 | None:intergenic | 45.0% | |
| CTTTCTCCTTCAAACAGAGG+TGG | + | chr1.2:7998443-7998462 | MS.gene016086:CDS | 45.0% | |
| GGTCAAATAAATTGGGACGG+AGG | - | chr1.2:7997817-7997836 | None:intergenic | 45.0% | |
| GGTTTCCATGTTGGACTCAA+AGG | + | chr1.2:7997119-7997138 | MS.gene016086:CDS | 45.0% | |
| GTGGCCTAAAAACATCACCA+TGG | - | chr1.2:7998328-7998347 | None:intergenic | 45.0% | |
| TCAGTCTGTCAAACCAGTTG+TGG | + | chr1.2:7997390-7997409 | MS.gene016086:intron | 45.0% | |
| TCATGTACCACGCTTGTTCA+GGG | - | chr1.2:7998808-7998827 | None:intergenic | 45.0% | |
| TCCTGATCCACACGCTTTAT+GGG | - | chr1.2:7997080-7997099 | None:intergenic | 45.0% | |
| TCTCTTCTTGTGCTTCTTCC+TGG | - | chr1.2:7998289-7998308 | None:intergenic | 45.0% | |
| TCTGTGTGAAATGAGCCAAG+AGG | - | chr1.2:7997838-7997857 | None:intergenic | 45.0% | |
| TGACAGCTATGCTCTTGCTA+TGG | + | chr1.2:7998471-7998490 | MS.gene016086:CDS | 45.0% | |
| TGCAAGTAGGCAGAGGTAAA+TGG | - | chr1.2:7998086-7998105 | None:intergenic | 45.0% | |
| TGCGTAAAATCCAATGGTGC+CGG | - | chr1.2:7999197-7999216 | None:intergenic | 45.0% | |
| TGTGCAGTGAGGATTACTTG+TGG | + | chr1.2:7999014-7999033 | MS.gene016086:CDS | 45.0% | |
| TTCATGTACCACGCTTGTTC+AGG | - | chr1.2:7998809-7998828 | None:intergenic | 45.0% | |
| ! | ACAATGCTCTTTGCTGTCCT+TGG | + | chr1.2:7998416-7998435 | MS.gene016086:CDS | 45.0% |
| ! | ATGTGAAGTGGGCTTCAAGA+TGG | + | chr1.2:7998114-7998133 | MS.gene016086:CDS | 45.0% |
| ! | CATCTTTGGCTTCCTCTTTC+TGG | + | chr1.2:7998931-7998950 | MS.gene016086:CDS | 45.0% |
| ! | GAAGAAGCACAAGAAGAGAC+TGG | + | chr1.2:7998290-7998309 | MS.gene016086:CDS | 45.0% |
| ! | GACAGCTATGCTCTTGCTAT+GGG | + | chr1.2:7998472-7998491 | MS.gene016086:CDS | 45.0% |
| ! | TGTGAAGTGGGCTTCAAGAT+GGG | + | chr1.2:7998115-7998134 | MS.gene016086:CDS | 45.0% |
| ! | TTGGTGGCTATGTTGGATTC+AGG | + | chr1.2:7998732-7998751 | MS.gene016086:CDS | 45.0% |
| ! | TTTGTTGTAACCGGCACCAT+TGG | + | chr1.2:7999184-7999203 | MS.gene016086:CDS | 45.0% |
| !! | ATTGGCTTGCATATGCCAAG+TGG | + | chr1.2:7997660-7997679 | MS.gene016086:intron | 45.0% |
| !! | GAGTATCGGGTGAACATGTA+CGG | + | chr1.2:7996934-7996953 | MS.gene016086:intron | 45.0% |
| !! | GCTCTTGCTATGGGTTTTCA+TGG | + | chr1.2:7998481-7998500 | MS.gene016086:CDS | 45.0% |
| !! | GCTTTGAGGTTAAGCCATTC+AGG | + | chr1.2:7997334-7997353 | MS.gene016086:CDS | 45.0% |
| !!! | ACGCATGCTTTTGGTTCACA+AGG | + | chr1.2:7999212-7999231 | MS.gene016086:CDS | 45.0% |
| AAAATGGCAGAGACAGAGGC+AGG | - | chr1.2:7998599-7998618 | None:intergenic | 50.0% | |
| AAATGGCAGAGACAGAGGCA+GGG | - | chr1.2:7998598-7998617 | None:intergenic | 50.0% | |
| ACAAGCGTGGTACATGAACC+CGG | + | chr1.2:7998811-7998830 | MS.gene016086:CDS | 50.0% | |
| ACTGGTTGGAAGCTTGTCCA+TGG | + | chr1.2:7998308-7998327 | MS.gene016086:CDS | 50.0% | |
| ATGTTTAGCATGGGGGTCAC+AGG | - | chr1.2:7997509-7997528 | None:intergenic | 50.0% | |
| CACATCACTCTCCTGCAAGT+AGG | - | chr1.2:7998099-7998118 | None:intergenic | 50.0% | |
| CCTATCAGAACTGAGAAGGC+CGG | - | chr1.2:7998833-7998852 | None:intergenic | 50.0% | |
| CTACTTCCAGTTGTGCAGTG+AGG | + | chr1.2:7999003-7999022 | MS.gene016086:CDS | 50.0% | |
| CTATCAGAACTGAGAAGGCC+GGG | - | chr1.2:7998832-7998851 | None:intergenic | 50.0% | |
| CTGGAAGTAGCAAAGCACGA+CGG | - | chr1.2:7998993-7999012 | None:intergenic | 50.0% | |
| CTTGTTCAGGGATCTGCCTT+GGG | - | chr1.2:7998796-7998815 | None:intergenic | 50.0% | |
| GAACAAGACTGCAGTCCTGA+GGG | - | chr1.2:7998576-7998595 | None:intergenic | 50.0% | |
| GCAGGAGAGTGATGTGAAGT+GGG | + | chr1.2:7998103-7998122 | MS.gene016086:intron | 50.0% | |
| GCAGTGAGGATTACTTGTGG+TGG | + | chr1.2:7999017-7999036 | MS.gene016086:CDS | 50.0% | |
| GGATGACGAAGACCAGAAAG+AGG | - | chr1.2:7998946-7998965 | None:intergenic | 50.0% | |
| GGTTGTTCCCATAAAGCGTG+TGG | + | chr1.2:7997070-7997089 | MS.gene016086:CDS | 50.0% | |
| GTACAATGAGCTTGAGACCC+AGG | + | chr1.2:7998268-7998287 | MS.gene016086:CDS | 50.0% | |
| GTGAGGATTACTTGTGGTGG+TGG | + | chr1.2:7999020-7999039 | MS.gene016086:CDS | 50.0% | |
| TCCCATAAAGCGTGTGGATC+AGG | + | chr1.2:7997076-7997095 | MS.gene016086:CDS | 50.0% | |
| TCCCCCTATCAGAACTGAGA+AGG | - | chr1.2:7998837-7998856 | None:intergenic | 50.0% | |
| TGCAGGAGAGTGATGTGAAG+TGG | + | chr1.2:7998102-7998121 | MS.gene016086:intron | 50.0% | |
| TGCCTCTACCTTCTATGTGC+AGG | + | chr1.2:7997027-7997046 | MS.gene016086:intron | 50.0% | |
| ! | CGGCCTTCTCAGTTCTGATA+GGG | + | chr1.2:7998831-7998850 | MS.gene016086:CDS | 50.0% |
| ! | GCCTTCTCAGTTCTGATAGG+GGG | + | chr1.2:7998833-7998852 | MS.gene016086:CDS | 50.0% |
| ! | GGCCTTCTCAGTTCTGATAG+GGG | + | chr1.2:7998832-7998851 | MS.gene016086:CDS | 50.0% |
| ! | TCATCTGGAGCTGTGCCATT+TGG | + | chr1.2:7998653-7998672 | MS.gene016086:CDS | 50.0% |
| !! | AATCTTGGAGAAGTGCTCCG+TGG | + | chr1.2:7996689-7996708 | MS.gene016086:CDS | 50.0% |
| !! | GGTGCCGGTTACAACAAAGA+AGG | - | chr1.2:7999182-7999201 | None:intergenic | 50.0% |
| !! | TGCCAGAATAGTGGGCTTTG+AGG | + | chr1.2:7997320-7997339 | MS.gene016086:CDS | 50.0% |
| ACTCTCCTGCAAGTAGGCAG+AGG | - | chr1.2:7998093-7998112 | None:intergenic | 55.0% | |
| GCTTGTTCAGGGATCTGCCT+TGG | - | chr1.2:7998797-7998816 | None:intergenic | 55.0% | |
| GGAACAAGACTGCAGTCCTG+AGG | - | chr1.2:7998577-7998596 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr1.2:7998016-7998035 | MS.gene016086:intron | 55.0% | |
| GTGCAGAAGAGCCAGATGTG+AGG | - | chr1.2:7999054-7999073 | None:intergenic | 55.0% | |
| TGGCGCTCTTACCTCACATC+TGG | + | chr1.2:7999040-7999059 | MS.gene016086:CDS | 55.0% | |
| TGTCCTCTTTCTCTCGGGCA+TGG | + | chr1.2:7998202-7998221 | MS.gene016086:CDS | 55.0% | |
| ! | CCGGCCTTCTCAGTTCTGAT+AGG | + | chr1.2:7998830-7998849 | MS.gene016086:CDS | 55.0% |
| CCACCATGCCCGAGAGAAAG+AGG | - | chr1.2:7998208-7998227 | None:intergenic | 60.0% | |
| CCTCTTTCTCTCGGGCATGG+TGG | + | chr1.2:7998205-7998224 | MS.gene016086:CDS | 60.0% | |
| GGCAGATCCCTGAACAAGCG+TGG | + | chr1.2:7998798-7998817 | MS.gene016086:CDS | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr1.2:7998015-7998034 | MS.gene016086:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 7996566 | 7999264 | 7996566 | ID=MS.gene016086 |
| chr1.2 | mRNA | 7996566 | 7999264 | 7996566 | ID=MS.gene016086.t1;Parent=MS.gene016086 |
| chr1.2 | exon | 7996566 | 7996739 | 7996566 | ID=MS.gene016086.t1.exon1;Parent=MS.gene016086.t1 |
| chr1.2 | CDS | 7996566 | 7996739 | 7996566 | ID=cds.MS.gene016086.t1;Parent=MS.gene016086.t1 |
| chr1.2 | exon | 7996841 | 7996950 | 7996841 | ID=MS.gene016086.t1.exon2;Parent=MS.gene016086.t1 |
| chr1.2 | CDS | 7996841 | 7996950 | 7996841 | ID=cds.MS.gene016086.t1;Parent=MS.gene016086.t1 |
| chr1.2 | exon | 7997049 | 7997154 | 7997049 | ID=MS.gene016086.t1.exon3;Parent=MS.gene016086.t1 |
| chr1.2 | CDS | 7997049 | 7997154 | 7997049 | ID=cds.MS.gene016086.t1;Parent=MS.gene016086.t1 |
| chr1.2 | exon | 7997243 | 7997355 | 7997243 | ID=MS.gene016086.t1.exon4;Parent=MS.gene016086.t1 |
| chr1.2 | CDS | 7997243 | 7997355 | 7997243 | ID=cds.MS.gene016086.t1;Parent=MS.gene016086.t1 |
| chr1.2 | exon | 7997456 | 7997606 | 7997456 | ID=MS.gene016086.t1.exon5;Parent=MS.gene016086.t1 |
| chr1.2 | CDS | 7997456 | 7997606 | 7997456 | ID=cds.MS.gene016086.t1;Parent=MS.gene016086.t1 |
| chr1.2 | exon | 7998107 | 7999264 | 7998107 | ID=MS.gene016086.t1.exon6;Parent=MS.gene016086.t1 |
| chr1.2 | CDS | 7998107 | 7999264 | 7998107 | ID=cds.MS.gene016086.t1;Parent=MS.gene016086.t1 |
| Gene Sequence |
| Protein sequence |
