Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32702.t1 | XP_003603291.1 | 99.8 | 636 | 1 | 0 | 1 | 636 | 1 | 636 | 0.00E+00 | 1255.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32702.t1 | Q9C5N2 | 83.3 | 645 | 98 | 3 | 1 | 636 | 1 | 644 | 2.5e-312 | 1072.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32702.t1 | G7J9U2 | 99.8 | 636 | 1 | 0 | 1 | 636 | 1 | 636 | 0.0e+00 | 1255.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052289 | MS.gene32702 | 0.821724 | 3.47E-53 | -1.69E-46 |
| MS.gene057195 | MS.gene32702 | 0.812473 | 4.17E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014910 | MS.gene32702 | PPI |
| MS.gene32702 | MS.gene80184 | PPI |
| MS.gene32702 | MS.gene036639 | PPI |
| MS.gene32702 | MS.gene041418 | PPI |
| MS.gene32702 | MS.gene014910 | PPI |
| MS.gene32702 | MS.gene011190 | PPI |
| MS.gene80184 | MS.gene32702 | PPI |
| MS.gene32702 | MS.gene57710 | PPI |
| MS.gene32702 | MS.gene016086 | PPI |
| MS.gene32702 | MS.gene33117 | PPI |
| MS.gene32702 | MS.gene36990 | PPI |
| MS.gene32702 | MS.gene42664 | PPI |
| MS.gene32702 | MS.gene58761 | PPI |
| MS.gene32702 | MS.gene80181 | PPI |
| MS.gene32702 | MS.gene36992 | PPI |
| MS.gene32702 | MS.gene020254 | PPI |
| MS.gene32702 | MS.gene36542 | PPI |
| MS.gene32702 | MS.gene058486 | PPI |
| MS.gene32702 | MS.gene051485 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32702.t1 | MTR_3g105950 | 99.843 | 636 | 1 | 0 | 1 | 636 | 1 | 636 | 0.0 | 1307 |
| MS.gene32702.t1 | MTR_1g014080 | 89.655 | 638 | 63 | 3 | 1 | 636 | 1 | 637 | 0.0 | 1160 |
| MS.gene32702.t1 | MTR_8g016270 | 75.475 | 632 | 153 | 2 | 6 | 636 | 18 | 648 | 0.0 | 999 |
| MS.gene32702.t1 | MTR_5g098730 | 45.023 | 653 | 301 | 14 | 22 | 636 | 33 | 665 | 0.0 | 531 |
| MS.gene32702.t1 | MTR_3g082140 | 44.720 | 644 | 316 | 15 | 22 | 636 | 27 | 659 | 2.89e-179 | 524 |
| MS.gene32702.t1 | MTR_0204s0010 | 48.690 | 458 | 212 | 7 | 191 | 636 | 2 | 448 | 1.30e-150 | 443 |
| MS.gene32702.t1 | MTR_6g074910 | 32.237 | 608 | 357 | 8 | 35 | 636 | 30 | 588 | 6.43e-111 | 345 |
| MS.gene32702.t1 | MTR_5g077170 | 32.072 | 608 | 360 | 8 | 35 | 636 | 31 | 591 | 4.63e-110 | 343 |
| MS.gene32702.t1 | MTR_8g088730 | 33.225 | 614 | 343 | 10 | 35 | 636 | 31 | 589 | 8.33e-100 | 317 |
| MS.gene32702.t1 | MTR_2g006300 | 33.607 | 610 | 340 | 9 | 37 | 636 | 29 | 583 | 2.01e-96 | 308 |
| MS.gene32702.t1 | MTR_4g053270 | 30.744 | 605 | 362 | 10 | 36 | 634 | 34 | 587 | 3.01e-86 | 281 |
| MS.gene32702.t1 | MTR_7g060560 | 87.288 | 118 | 15 | 0 | 91 | 208 | 274 | 391 | 1.29e-63 | 215 |
| MS.gene32702.t1 | MTR_3g090510 | 81.967 | 122 | 20 | 1 | 87 | 208 | 275 | 394 | 1.68e-60 | 207 |
| MS.gene32702.t1 | MTR_5g014340 | 79.439 | 107 | 17 | 1 | 93 | 199 | 1 | 102 | 4.50e-43 | 155 |
| MS.gene32702.t1 | MTR_4g116770 | 40.704 | 199 | 101 | 6 | 1 | 193 | 1 | 188 | 4.63e-33 | 135 |
| MS.gene32702.t1 | MTR_0249s0060 | 85.294 | 68 | 10 | 0 | 93 | 160 | 1 | 68 | 4.82e-28 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32702.t1 | AT5G25100 | 83.256 | 645 | 98 | 3 | 1 | 636 | 1 | 644 | 0.0 | 1092 |
| MS.gene32702.t1 | AT5G10840 | 82.535 | 647 | 101 | 3 | 1 | 636 | 3 | 648 | 0.0 | 1091 |
| MS.gene32702.t1 | AT5G25100 | 82.362 | 652 | 98 | 4 | 1 | 636 | 1 | 651 | 0.0 | 1087 |
| MS.gene32702.t1 | AT2G24170 | 80.408 | 638 | 122 | 3 | 1 | 636 | 1 | 637 | 0.0 | 1048 |
| MS.gene32702.t1 | AT3G13772 | 76.136 | 616 | 145 | 2 | 22 | 636 | 27 | 641 | 0.0 | 991 |
| MS.gene32702.t1 | AT1G55130 | 73.899 | 636 | 162 | 3 | 4 | 636 | 3 | 637 | 0.0 | 979 |
| MS.gene32702.t1 | AT2G24170 | 76.629 | 445 | 101 | 3 | 1 | 443 | 1 | 444 | 0.0 | 710 |
| MS.gene32702.t1 | AT5G35160 | 44.678 | 667 | 304 | 13 | 13 | 636 | 14 | 658 | 0.0 | 540 |
| MS.gene32702.t1 | AT5G35160 | 44.678 | 667 | 304 | 13 | 13 | 636 | 14 | 658 | 0.0 | 540 |
| MS.gene32702.t1 | AT5G35160 | 44.678 | 667 | 304 | 13 | 13 | 636 | 14 | 658 | 0.0 | 540 |
| MS.gene32702.t1 | AT4G12650 | 44.359 | 647 | 314 | 12 | 22 | 636 | 20 | 652 | 1.55e-173 | 509 |
| MS.gene32702.t1 | AT5G35160 | 42.643 | 666 | 291 | 13 | 13 | 636 | 14 | 630 | 3.97e-169 | 497 |
| MS.gene32702.t1 | AT2G01970 | 33.224 | 608 | 350 | 8 | 36 | 636 | 34 | 592 | 6.38e-118 | 364 |
| MS.gene32702.t1 | AT5G37310 | 31.905 | 630 | 360 | 10 | 24 | 636 | 16 | 593 | 5.41e-110 | 343 |
| MS.gene32702.t1 | AT5G37310 | 31.905 | 630 | 360 | 10 | 24 | 636 | 16 | 593 | 5.41e-110 | 343 |
| MS.gene32702.t1 | AT1G14670 | 32.120 | 632 | 373 | 8 | 12 | 636 | 10 | 592 | 6.31e-110 | 343 |
| MS.gene32702.t1 | AT1G10950 | 34.272 | 604 | 332 | 11 | 43 | 636 | 41 | 589 | 5.36e-99 | 315 |
| MS.gene32702.t1 | AT1G08350 | 30.866 | 635 | 378 | 12 | 11 | 636 | 7 | 589 | 2.52e-98 | 313 |
| MS.gene32702.t1 | AT1G08350 | 30.866 | 635 | 378 | 12 | 11 | 636 | 7 | 589 | 2.52e-98 | 313 |
| MS.gene32702.t1 | AT1G08350 | 30.948 | 559 | 326 | 11 | 86 | 636 | 2 | 508 | 1.19e-87 | 282 |
| MS.gene32702.t1 | AT1G08350 | 30.017 | 583 | 338 | 12 | 11 | 584 | 7 | 528 | 2.55e-83 | 272 |
Find 145 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTCCACAAGATTTCTTTA+AGG | 0.160692 | 3.1:-83798969 | MS.gene32702:intron |
| TCTCTTCTTGGGCTTCTTCC+TGG | 0.162911 | 3.1:+83796593 | None:intergenic |
| ATGATTGTTCTCTTCCTTTC+GGG | 0.199038 | 3.1:-83796682 | MS.gene32702:CDS |
| AACACGAGTATGATGGTAAA+TGG | 0.258508 | 3.1:-83797240 | MS.gene32702:CDS |
| GACAGCCATGCTCTTGGTTT+GGG | 0.261532 | 3.1:-83796407 | MS.gene32702:CDS |
| CAATAGAGAACCAGTGAATT+TGG | 0.271157 | 3.1:+83796716 | None:intergenic |
| CACATATGATGTTGATTTCC+AGG | 0.271731 | 3.1:-83797113 | MS.gene32702:intron |
| AATGATTGTTCTCTTCCTTT+CGG | 0.275069 | 3.1:-83796683 | MS.gene32702:CDS |
| CTCTTCTTGGGCTTCTTCCT+GGG | 0.277059 | 3.1:+83796594 | None:intergenic |
| TTGTCCATGGGGATGTATTT+AGG | 0.282833 | 3.1:-83796558 | MS.gene32702:CDS |
| TATATTAAATGCTCTCATTT+GGG | 0.284478 | 3.1:-83796257 | MS.gene32702:CDS |
| TGACAGCCATGCTCTTGGTT+TGG | 0.284901 | 3.1:-83796408 | MS.gene32702:CDS |
| GCTTCCAACCAGTCTCTTCT+TGG | 0.285153 | 3.1:+83796581 | None:intergenic |
| GTCATCATTCATTAGCAAAT+AGG | 0.315280 | 3.1:+83796738 | None:intergenic |
| TTGGATTCTATGCATGCTTT+TGG | 0.316198 | 3.1:-83795676 | MS.gene32702:CDS |
| GCTTTGAGGTTAAGCCATTC+AGG | 0.317785 | 3.1:-83797379 | MS.gene32702:intron |
| TTATATTAAATGCTCTCATT+TGG | 0.322327 | 3.1:-83796258 | MS.gene32702:CDS |
| ACCATGATATTTGCTATCCT+TGG | 0.330022 | 3.1:-83796463 | MS.gene32702:CDS |
| TTCACAGGATTCTCAATTGC+AGG | 0.336074 | 3.1:+83796121 | None:intergenic |
| GCCTGCTCAGGGATCTGCCT+TGG | 0.337693 | 3.1:+83796085 | None:intergenic |
| CTTCCAACCAGTCTCTTCTT+GGG | 0.349041 | 3.1:+83796582 | None:intergenic |
| TTCATGTACCAGGCCTGCTC+AGG | 0.350610 | 3.1:+83796073 | None:intergenic |
| TCTTTATCCTCACCTCAATC+TGG | 0.357240 | 3.1:-83795988 | MS.gene32702:CDS |
| TGGCGGTCATACCTTACTTC+TGG | 0.362279 | 3.1:-83795839 | MS.gene32702:CDS |
| CCCACAACATTACACATTTG+TGG | 0.366682 | 3.1:+83797854 | None:intergenic |
| GCTTTCTCCTTCTACCTTCC+CGG | 0.371736 | 3.1:-83798995 | MS.gene32702:CDS |
| GGTTCCTCTCTCCTTCAAAC+CGG | 0.375085 | 3.1:-83796441 | MS.gene32702:CDS |
| AGGATAGTGCAGAAAATCTT+GGG | 0.390517 | 3.1:-83798186 | MS.gene32702:CDS |
| TTTGTGGTTACCGGTACTAT+TGG | 0.395492 | 3.1:-83795695 | MS.gene32702:CDS |
| CCTGCTCAGGGATCTGCCTT+GGG | 0.397639 | 3.1:+83796086 | None:intergenic |
| CTGTGTGTTTATGTTGGAAC+AGG | 0.398214 | 3.1:-83796514 | MS.gene32702:CDS |
| CATGTATCCAAAGTAAAATA+TGG | 0.398933 | 3.1:+83795739 | None:intergenic |
| CACAGCAAATCTGAGTTGTT+AGG | 0.400145 | 3.1:+83796532 | None:intergenic |
| AATAAAATGAGTACGGAAGC+TGG | 0.403462 | 3.1:+83798239 | None:intergenic |
| TGCTAGAATCGTGGGCTTTG+AGG | 0.404094 | 3.1:-83797393 | MS.gene32702:CDS |
| CCATGATATTTGCTATCCTT+GGG | 0.409788 | 3.1:-83796462 | MS.gene32702:CDS |
| CTTTAGTTGTTCCCATAAAA+CGG | 0.410146 | 3.1:-83797645 | MS.gene32702:CDS |
| TGTTCTCTTCCTTTCGGGCA+TGG | 0.411830 | 3.1:-83796677 | MS.gene32702:CDS |
| TCATCTGGAGCTGTGCCATT+TGG | 0.418785 | 3.1:-83796226 | MS.gene32702:CDS |
| CAGCTTTGTGATTTCAAGCT+TGG | 0.419934 | 3.1:+83795769 | None:intergenic |
| CAGGATAGTGCAGAAAATCT+TGG | 0.422003 | 3.1:-83798187 | MS.gene32702:CDS |
| AGTAATCCTCACTGCACAAC+TGG | 0.425366 | 3.1:+83795870 | None:intergenic |
| ATTTGGTACAATGTTTGCTC+TGG | 0.433667 | 3.1:-83796209 | MS.gene32702:CDS |
| GTTCCTCTCTCCTTCAAACC+GGG | 0.434696 | 3.1:-83796440 | MS.gene32702:CDS |
| ACAGCAAATCTGAGTTGTTA+GGG | 0.443885 | 3.1:+83796533 | None:intergenic |
| AGCGACGCCGGGAAGGTAGA+AGG | 0.446747 | 3.1:+83798988 | None:intergenic |
| GACTCAAAGGGCAGTATACC+GGG | 0.448506 | 3.1:-83797579 | MS.gene32702:CDS |
| GCTCATGACAGCCATGCTCT+TGG | 0.449410 | 3.1:-83796413 | MS.gene32702:CDS |
| CATTGAAAATTCACTATATG+TGG | 0.454070 | 3.1:-83798143 | MS.gene32702:intron |
| GGTTTCCATGTTGGACTCAA+AGG | 0.456598 | 3.1:-83797592 | MS.gene32702:CDS |
| GGCAGATCCCTGAGCAGGCC+TGG | 0.457305 | 3.1:-83796081 | MS.gene32702:CDS |
| CACATCTCTATGATACTTGA+CGG | 0.457417 | 3.1:+83797427 | None:intergenic |
| TCCCATAAAACGGAATGATC+AGG | 0.460700 | 3.1:-83797635 | MS.gene32702:CDS |
| AAAATGACAGAGACAATTGC+AGG | 0.461385 | 3.1:+83796283 | None:intergenic |
| TATCAGCTTGGTTTCCATGT+TGG | 0.466494 | 3.1:-83797601 | MS.gene32702:CDS |
| TTGCTCTCTTCAACTTCTTG+AGG | 0.468169 | 3.1:+83797148 | None:intergenic |
| AGAAGATCAATGACGAGTAT+CGG | 0.469743 | 3.1:-83797790 | MS.gene32702:CDS |
| GGACTCAAAGGGCAGTATAC+CGG | 0.471498 | 3.1:-83797580 | MS.gene32702:CDS |
| GAAGATCAATGACGAGTATC+GGG | 0.473535 | 3.1:-83797789 | MS.gene32702:CDS |
| AGAAGGAGAAAGCGGTGTGA+AGG | 0.477134 | 3.1:+83799005 | None:intergenic |
| GAAATCTTGTGGAGCGACGC+CGG | 0.479883 | 3.1:+83798976 | None:intergenic |
| GATTTGCTGTGTGTTTATGT+TGG | 0.480715 | 3.1:-83796520 | MS.gene32702:CDS |
| TCTCTCCTTCAAACCGGGGT+GGG | 0.482513 | 3.1:-83796435 | MS.gene32702:CDS |
| ATGAGCCCACCCCGGTTTGA+AGG | 0.482813 | 3.1:+83796430 | None:intergenic |
| GAGGGTCACATGTTGTCAAA+CGG | 0.488799 | 3.1:+83797203 | None:intergenic |
| GTTTCCATGTTGGACTCAAA+GGG | 0.490076 | 3.1:-83797591 | MS.gene32702:CDS |
| AGGGTCACATGTTGTCAAAC+GGG | 0.490682 | 3.1:+83797204 | None:intergenic |
| ACACGAGTATGATGGTAAAT+GGG | 0.490956 | 3.1:-83797239 | MS.gene32702:CDS |
| AGAATGTTGCATAAAGAAAG+AGG | 0.493377 | 3.1:+83795801 | None:intergenic |
| CCAATCAAAACAGAGAAGGC+TGG | 0.495505 | 3.1:+83796049 | None:intergenic |
| GGAAGTGAATAAAATGAGTA+CGG | 0.496741 | 3.1:+83798232 | None:intergenic |
| AAATCTTGTGGAGCGACGCC+GGG | 0.513081 | 3.1:+83798977 | None:intergenic |
| GAAGGCTGGGTTCATGTACC+AGG | 0.517535 | 3.1:+83796063 | None:intergenic |
| ACTGGTTGGAAGCTTGTCCA+TGG | 0.517914 | 3.1:-83796571 | MS.gene32702:CDS |
| GATTCTACCGTCTATCAGCT+TGG | 0.519977 | 3.1:-83797613 | MS.gene32702:CDS |
| CTCTCTCCTTCAAACCGGGG+TGG | 0.526606 | 3.1:-83796436 | MS.gene32702:CDS |
| AGAGCAAACATTGTACCAAA+TGG | 0.527636 | 3.1:+83796211 | None:intergenic |
| CCCAAGGCAGATCCCTGAGC+AGG | 0.531266 | 3.1:-83796086 | MS.gene32702:CDS |
| CCCAAGGATAGCAAATATCA+TGG | 0.533552 | 3.1:+83796462 | None:intergenic |
| AAGCCCAAGAAGAGACTGGT+TGG | 0.534521 | 3.1:-83796585 | MS.gene32702:CDS |
| CAATCAAAACAGAGAAGGCT+GGG | 0.541967 | 3.1:+83796050 | None:intergenic |
| GTATAACGAGCTTGAGACCC+AGG | 0.542211 | 3.1:-83796611 | MS.gene32702:CDS |
| ATATTAAATGCTCTCATTTG+GGG | 0.542556 | 3.1:-83796256 | MS.gene32702:CDS |
| GCCACAAATGTGTAATGTTG+TGG | 0.542830 | 3.1:-83797855 | MS.gene32702:CDS |
| CTGGTTGGAAGCTTGTCCAT+GGG | 0.544476 | 3.1:-83796570 | MS.gene32702:CDS |
| TGCATAGAATCCAATAGTAC+CGG | 0.547684 | 3.1:+83795685 | None:intergenic |
| GTGCGGAAGAACCAGAAGTA+AGG | 0.547713 | 3.1:+83795828 | None:intergenic |
| CGCTTGTACAAAATGTTCAA+AGG | 0.556072 | 3.1:-83796349 | MS.gene32702:CDS |
| TCAAGAAGTTGAAGAGAGCA+AGG | 0.556425 | 3.1:-83797146 | MS.gene32702:CDS |
| ACTGAATCTGCTAGAATCGT+GGG | 0.559429 | 3.1:-83797401 | MS.gene32702:CDS |
| ATAAAATGAGTACGGAAGCT+GGG | 0.562743 | 3.1:+83798240 | None:intergenic |
| ATGTGAAGTGGGCTTCAAGA+TGG | 0.563049 | 3.1:-83796765 | MS.gene32702:CDS |
| GGAACAAGGTTGCAGTCCTG+AGG | 0.563341 | 3.1:+83796305 | None:intergenic |
| CAAGCTTGAAATCACAAAGC+TGG | 0.563454 | 3.1:-83795768 | MS.gene32702:CDS |
| CGGTAAATGCCAAATGATTG+TGG | 0.563495 | 3.1:+83797447 | None:intergenic |
| TCATGTACCAGGCCTGCTCA+GGG | 0.566599 | 3.1:+83796074 | None:intergenic |
| TCAATGAAAACAGCTCCAAA+TGG | 0.567404 | 3.1:+83796016 | None:intergenic |
| AAACTGATTCAACCAGATTG+AGG | 0.568595 | 3.1:+83795976 | None:intergenic |
| AACTGAATCTGCTAGAATCG+TGG | 0.569950 | 3.1:-83797402 | MS.gene32702:CDS |
| GAAGAAGCCCAAGAAGAGAC+TGG | 0.572886 | 3.1:-83796589 | MS.gene32702:CDS |
| TTATGGGAACAACTAAAGGA+AGG | 0.576141 | 3.1:+83797650 | None:intergenic |
| TGAATGATGACCAAATTCAC+TGG | 0.577066 | 3.1:-83796726 | MS.gene32702:CDS |
| CCACAAATGTGTAATGTTGT+GGG | 0.579438 | 3.1:-83797854 | MS.gene32702:CDS |
| GTGAGGATTACTTGTGGTGG+TGG | 0.581791 | 3.1:-83795859 | MS.gene32702:CDS |
| AATCTTGGGGAAGTTCTTCG+TGG | 0.582702 | 3.1:-83798172 | MS.gene32702:CDS |
| AGTACCTTAAAGAAATCTTG+TGG | 0.582843 | 3.1:+83798965 | None:intergenic |
| CTTGTGGAGCGACGCCGGGA+AGG | 0.583502 | 3.1:+83798981 | None:intergenic |
| AGAGACAATTGCAGGGAACA+AGG | 0.584334 | 3.1:+83796291 | None:intergenic |
| CGTTATACTTTGCAATGTCA+CGG | 0.586779 | 3.1:+83796626 | None:intergenic |
| AGGATTACTTGTGGTGGTGG+CGG | 0.591655 | 3.1:-83795856 | MS.gene32702:CDS |
| ACAACTGTGTGCTTAGCATG+AGG | 0.593523 | 3.1:+83797184 | None:intergenic |
| GAACAAGGTTGCAGTCCTGA+GGG | 0.599617 | 3.1:+83796306 | None:intergenic |
| CAACTGTGTGCTTAGCATGA+GGG | 0.605991 | 3.1:+83797185 | None:intergenic |
| AGTGTTAAACACGAGTATGA+TGG | 0.607329 | 3.1:-83797247 | MS.gene32702:CDS |
| TGTGAAGTGGGCTTCAAGAT+GGG | 0.611136 | 3.1:-83796764 | MS.gene32702:CDS |
| AGTGGAAAAGAATTGCCCTC+AGG | 0.612537 | 3.1:-83796321 | MS.gene32702:CDS |
| GAAAACCCAAACCAAGAGCA+TGG | 0.614652 | 3.1:+83796402 | None:intergenic |
| TCATTGCCACCATGCCCGAA+AGG | 0.619231 | 3.1:+83796668 | None:intergenic |
| TTTCAGCACAAGTGACAACA+AGG | 0.619677 | 3.1:+83795915 | None:intergenic |
| TGCAGGAGAGTGATGTGAAG+TGG | 0.630793 | 3.1:-83796777 | MS.gene32702:intron |
| CTACTTCCAGTTGTGCAGTG+AGG | 0.631692 | 3.1:-83795876 | MS.gene32702:CDS |
| ATGGAAACCAAGCTGATAGA+CGG | 0.633306 | 3.1:+83797606 | None:intergenic |
| TGAAAACAAACAAAATCCCA+AGG | 0.637171 | 3.1:-83796102 | MS.gene32702:CDS |
| TTCCTCTCTCCTTCAAACCG+GGG | 0.639857 | 3.1:-83796439 | MS.gene32702:CDS |
| GCAGGAGAGTGATGTGAAGT+GGG | 0.642804 | 3.1:-83796776 | MS.gene32702:intron |
| TTGAAGGAGAGAGGAACCCA+AGG | 0.649137 | 3.1:+83796446 | None:intergenic |
| GGATAGTGCAGAAAATCTTG+GGG | 0.654034 | 3.1:-83798185 | MS.gene32702:CDS |
| TCTCTTCCTTTCGGGCATGG+TGG | 0.655153 | 3.1:-83796674 | MS.gene32702:CDS |
| GCAGTGAGGATTACTTGTGG+TGG | 0.656188 | 3.1:-83795862 | MS.gene32702:CDS |
| AAATGACAGAGACAATTGCA+GGG | 0.656961 | 3.1:+83796284 | None:intergenic |
| GGGGCCTAAATACATCCCCA+TGG | 0.661749 | 3.1:+83796554 | None:intergenic |
| CACCCCGGTTTGAAGGAGAG+AGG | 0.665310 | 3.1:+83796437 | None:intergenic |
| TGGCTGTCATGAGCCCACCC+CGG | 0.665939 | 3.1:+83796422 | None:intergenic |
| CAGCAAATCTGAGTTGTTAG+GGG | 0.667045 | 3.1:+83796534 | None:intergenic |
| ACTGCCCTTTGAGTCCAACA+TGG | 0.674258 | 3.1:+83797587 | None:intergenic |
| AGCAAATCTGAGTTGTTAGG+GGG | 0.675452 | 3.1:+83796535 | None:intergenic |
| AAATGTTCAAAGGATCAGAG+TGG | 0.690463 | 3.1:-83796339 | MS.gene32702:CDS |
| TGTGCAGTGAGGATTACTTG+TGG | 0.692738 | 3.1:-83795865 | MS.gene32702:CDS |
| ATAAAGAAAGAGGTATAGTG+CGG | 0.699094 | 3.1:+83795811 | None:intergenic |
| GATTCAACCAGATTGAGGTG+AGG | 0.702133 | 3.1:+83795981 | None:intergenic |
| TGGTTGGAAGCTTGTCCATG+GGG | 0.704860 | 3.1:-83796569 | MS.gene32702:CDS |
| CTGGAAGTAGCAGAGCACAA+TGG | 0.716782 | 3.1:+83795889 | None:intergenic |
| GGGAAGGTAGAAGGAGAAAG+CGG | 0.717499 | 3.1:+83798997 | None:intergenic |
| ACTCAAAGGGCAGTATACCG+GGG | 0.753482 | 3.1:-83797578 | MS.gene32702:intron |
| AACGAATGTACAGAGCAAGG+AGG | 0.788698 | 3.1:-83797483 | MS.gene32702:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAATTTTTTAGTTTCTA+TGG | - | chr3.1:83796762-83796781 | MS.gene32702:CDS | 10.0% |
| !! | ATAAATGTTAAAAAATTGCT+TGG | + | chr3.1:83796741-83796760 | None:intergenic | 15.0% |
| !! | CTTAATGAAATATATAGTTT+AGG | - | chr3.1:83796620-83796639 | MS.gene32702:CDS | 15.0% |
| !!! | ATTGATGAACATTTTTATAA+TGG | - | chr3.1:83797747-83797766 | MS.gene32702:intron | 15.0% |
| !!! | TGTGTTTTTTTTTTTTTTTG+TGG | - | chr3.1:83796301-83796320 | MS.gene32702:CDS | 15.0% |
| !! | GTCAATTGTTGAAAATAAAA+TGG | + | chr3.1:83797372-83797391 | None:intergenic | 20.0% |
| !! | GTTATTAACATACATGAATT+AGG | - | chr3.1:83797650-83797669 | MS.gene32702:CDS | 20.0% |
| !! | TAAAATATTTCTTTGTTGCA+GGG | - | chr3.1:83796382-83796401 | MS.gene32702:CDS | 20.0% |
| !! | TACTAATAATCGTTGATATA+CGG | - | chr3.1:83795951-83795970 | MS.gene32702:CDS | 20.0% |
| !! | TATATTAAATGCTCTCATTT+GGG | - | chr3.1:83798432-83798451 | MS.gene32702:intron | 20.0% |
| !! | TTAAAATATTTCTTTGTTGC+AGG | - | chr3.1:83796381-83796400 | MS.gene32702:CDS | 20.0% |
| !! | TTATATTAAATGCTCTCATT+TGG | - | chr3.1:83798431-83798450 | MS.gene32702:intron | 20.0% |
| !!! | TCATCTTTTTGTTTAGTATT+TGG | - | chr3.1:83797392-83797411 | MS.gene32702:CDS | 20.0% |
| !!! | TTTCAAGTTATATCTCATAA+TGG | - | chr3.1:83796985-83797004 | MS.gene32702:intron | 20.0% |
| !!! | TTTTTATCAGTTTCTAAGAA+AGG | - | chr3.1:83796593-83796612 | MS.gene32702:CDS | 20.0% |
| ! | AAGTAAGTAAGGAAACTTAT+TGG | + | chr3.1:83797180-83797199 | None:intergenic | 25.0% |
| ! | AGATTGAATCTTAATTTCAG+TGG | - | chr3.1:83795907-83795926 | MS.gene32702:CDS | 25.0% |
| ! | ATATTAAATGCTCTCATTTG+GGG | - | chr3.1:83798433-83798452 | MS.gene32702:intron | 25.0% |
| ! | CATGTATCCAAAGTAAAATA+TGG | + | chr3.1:83798953-83798972 | None:intergenic | 25.0% |
| ! | CATTGAAAATTCACTATATG+TGG | - | chr3.1:83796546-83796565 | MS.gene32702:CDS | 25.0% |
| ! | GATAGAAGAAAAAGAAAAGT+TGG | + | chr3.1:83797786-83797805 | None:intergenic | 25.0% |
| ! | GTTATTATTTGATTCCGATT+TGG | - | chr3.1:83796784-83796803 | MS.gene32702:intron | 25.0% |
| !! | AATCAGTTTTACTACATCTT+TGG | - | chr3.1:83798727-83798746 | MS.gene32702:intron | 25.0% |
| !! | ATCAGTTTTACTACATCTTT+GGG | - | chr3.1:83798728-83798747 | MS.gene32702:intron | 25.0% |
| !! | CATATAGTGAATTTTCAATG+CGG | + | chr3.1:83796546-83796565 | None:intergenic | 25.0% |
| !! | GTATTTTATCCACAATCATT+TGG | - | chr3.1:83797233-83797252 | MS.gene32702:CDS | 25.0% |
| !!! | TCTTTTTGTTTAGTATTTGG+TGG | - | chr3.1:83797395-83797414 | MS.gene32702:CDS | 25.0% |
| AAATACAGATCGAGAAGAAA+TGG | + | chr3.1:83795757-83795776 | None:intergenic | 30.0% | |
| AATGATTGTTCTCTTCCTTT+CGG | - | chr3.1:83798006-83798025 | MS.gene32702:intron | 30.0% | |
| AATGTTCATCAATGCAAAAG+AGG | + | chr3.1:83797740-83797759 | None:intergenic | 30.0% | |
| ACTGAAATATACCACCAAAT+CGG | + | chr3.1:83796801-83796820 | None:intergenic | 30.0% | |
| AGAAAACTCGCAGAAAATAA+CGG | + | chr3.1:83796943-83796962 | None:intergenic | 30.0% | |
| AGAATGTTGCATAAAGAAAG+AGG | + | chr3.1:83798891-83798910 | None:intergenic | 30.0% | |
| AGTACCTTAAAGAAATCTTG+TGG | + | chr3.1:83795727-83795746 | None:intergenic | 30.0% | |
| ATGTTCATCAATGCAAAAGA+GGG | + | chr3.1:83797739-83797758 | None:intergenic | 30.0% | |
| CACAAAAATAATGACCTGAA+TGG | + | chr3.1:83797327-83797346 | None:intergenic | 30.0% | |
| CTTTAGTTGTTCCCATAAAA+CGG | - | chr3.1:83797044-83797063 | MS.gene32702:intron | 30.0% | |
| GATAGCTGCATTACATTTAA+AGG | + | chr3.1:83796246-83796265 | None:intergenic | 30.0% | |
| GGAAGTGAATAAAATGAGTA+CGG | + | chr3.1:83796460-83796479 | None:intergenic | 30.0% | |
| GTATTGAATAACAATAGCCA+TGG | + | chr3.1:83797158-83797177 | None:intergenic | 30.0% | |
| GTCATCATTCATTAGCAAAT+AGG | + | chr3.1:83797954-83797973 | None:intergenic | 30.0% | |
| TAATAATCGTTGATATACGG+AGG | - | chr3.1:83795954-83795973 | MS.gene32702:CDS | 30.0% | |
| TCGTTCAGATAAAGTAAGTA+AGG | + | chr3.1:83797191-83797210 | None:intergenic | 30.0% | |
| TGAAAACAAACAAAATCCCA+AGG | - | chr3.1:83798587-83798606 | MS.gene32702:intron | 30.0% | |
| TTCACCATAACAAAAAAGAG+AGG | + | chr3.1:83797839-83797858 | None:intergenic | 30.0% | |
| ! | ATAAAGAAAGAGGTATAGTG+CGG | + | chr3.1:83798881-83798900 | None:intergenic | 30.0% |
| ! | TTCTTTTTCTTCTATCCAAC+TGG | - | chr3.1:83797790-83797809 | MS.gene32702:CDS | 30.0% |
| ! | TTTGAACTCCTTAGCATTTT+TGG | + | chr3.1:83796878-83796897 | None:intergenic | 30.0% |
| !! | AATAACCATTCTAAAGCACA+GGG | + | chr3.1:83797636-83797655 | None:intergenic | 30.0% |
| !! | ATTATTTGATTCCGATTTGG+TGG | - | chr3.1:83796787-83796806 | MS.gene32702:intron | 30.0% |
| !! | TAATAACCATTCTAAAGCAC+AGG | + | chr3.1:83797637-83797656 | None:intergenic | 30.0% |
| !!! | GAACAGGTGTTCAATTTTTT+GGG | - | chr3.1:83798191-83798210 | MS.gene32702:CDS | 30.0% |
| !!! | TCATCCTCTCTTTTTTGTTA+TGG | - | chr3.1:83797832-83797851 | MS.gene32702:CDS | 30.0% |
| AAAATGACAGAGACAATTGC+AGG | + | chr3.1:83798409-83798428 | None:intergenic | 35.0% | |
| AAATGACAGAGACAATTGCA+GGG | + | chr3.1:83798408-83798427 | None:intergenic | 35.0% | |
| AAATGTTCAAAGGATCAGAG+TGG | - | chr3.1:83798350-83798369 | MS.gene32702:intron | 35.0% | |
| AACACGAGTATGATGGTAAA+TGG | - | chr3.1:83797449-83797468 | MS.gene32702:CDS | 35.0% | |
| AATAAAATGAGTACGGAAGC+TGG | + | chr3.1:83796453-83796472 | None:intergenic | 35.0% | |
| AATGAAGAAGACAATCCAGT+TGG | + | chr3.1:83797808-83797827 | None:intergenic | 35.0% | |
| AATGTGGTTATCCAATTCAG+AGG | + | chr3.1:83796655-83796674 | None:intergenic | 35.0% | |
| ACAAAACAATATGCATACCC+CGG | + | chr3.1:83797131-83797150 | None:intergenic | 35.0% | |
| ACACGAGTATGATGGTAAAT+GGG | - | chr3.1:83797450-83797469 | MS.gene32702:CDS | 35.0% | |
| ACAGCAAATCTGAGTTGTTA+GGG | + | chr3.1:83798159-83798178 | None:intergenic | 35.0% | |
| ACGAATCAGATAATCTTCGA+TGG | - | chr3.1:83796144-83796163 | MS.gene32702:CDS | 35.0% | |
| ACTTGATGCCAAAAATGCTA+AGG | - | chr3.1:83796867-83796886 | MS.gene32702:intron | 35.0% | |
| AGAAGATCAATGACGAGTAT+CGG | - | chr3.1:83796899-83796918 | MS.gene32702:intron | 35.0% | |
| AGAGCAAACATTGTACCAAA+TGG | + | chr3.1:83798481-83798500 | None:intergenic | 35.0% | |
| AGGATAGTGCAGAAAATCTT+GGG | - | chr3.1:83796503-83796522 | MS.gene32702:CDS | 35.0% | |
| AGTGTTAAACACGAGTATGA+TGG | - | chr3.1:83797442-83797461 | MS.gene32702:CDS | 35.0% | |
| ATAAAATGAGTACGGAAGCT+GGG | + | chr3.1:83796452-83796471 | None:intergenic | 35.0% | |
| ATGATTGTTCTCTTCCTTTC+GGG | - | chr3.1:83798007-83798026 | MS.gene32702:intron | 35.0% | |
| ATTTGGTACAATGTTTGCTC+TGG | - | chr3.1:83798480-83798499 | MS.gene32702:intron | 35.0% | |
| CAATAGAGAACCAGTGAATT+TGG | + | chr3.1:83797976-83797995 | None:intergenic | 35.0% | |
| CACATCTCTATGATACTTGA+CGG | + | chr3.1:83797265-83797284 | None:intergenic | 35.0% | |
| CCACAAATGTGTAATGTTGT+GGG | - | chr3.1:83796835-83796854 | MS.gene32702:intron | 35.0% | |
| CGCTTGTACAAAATGTTCAA+AGG | - | chr3.1:83798340-83798359 | MS.gene32702:intron | 35.0% | |
| CGTTATACTTTGCAATGTCA+CGG | + | chr3.1:83798066-83798085 | None:intergenic | 35.0% | |
| GTGTAGTTAGGAATAGATGT+TGG | - | chr3.1:83796108-83796127 | MS.gene32702:CDS | 35.0% | |
| TAAGTTCCACATGTGTAGTT+AGG | - | chr3.1:83796096-83796115 | MS.gene32702:CDS | 35.0% | |
| TCAATGAAAACAGCTCCAAA+TGG | + | chr3.1:83798676-83798695 | None:intergenic | 35.0% | |
| TCTATTCCTAACTACACATG+TGG | + | chr3.1:83796105-83796124 | None:intergenic | 35.0% | |
| TGAATGATGACCAAATTCAC+TGG | - | chr3.1:83797963-83797982 | MS.gene32702:intron | 35.0% | |
| TGCATAGAATCCAATAGTAC+CGG | + | chr3.1:83799007-83799026 | None:intergenic | 35.0% | |
| TTATGGGAACAACTAAAGGA+AGG | + | chr3.1:83797042-83797061 | None:intergenic | 35.0% | |
| TTGTGGTCATAAACTTGATC+TGG | - | chr3.1:83796318-83796337 | MS.gene32702:CDS | 35.0% | |
| TTTAGCCAACTTTGATTGCA+CGG | - | chr3.1:83796036-83796055 | MS.gene32702:CDS | 35.0% | |
| ! | AAACTGATTCAACCAGATTG+AGG | + | chr3.1:83798716-83798735 | None:intergenic | 35.0% |
| ! | ACTATCCTGTATCTTTTTGG+GGG | + | chr3.1:83796491-83796510 | None:intergenic | 35.0% |
| ! | ATCCTGATCATTCCGTTTTA+TGG | + | chr3.1:83797059-83797078 | None:intergenic | 35.0% |
| ! | CACTATCCTGTATCTTTTTG+GGG | + | chr3.1:83796492-83796511 | None:intergenic | 35.0% |
| ! | CGTTTTATGGGAACAACTAA+AGG | + | chr3.1:83797046-83797065 | None:intergenic | 35.0% |
| ! | GCACTATCCTGTATCTTTTT+GGG | + | chr3.1:83796493-83796512 | None:intergenic | 35.0% |
| ! | GTGTCAGCCATATTTTACTT+TGG | - | chr3.1:83798943-83798962 | MS.gene32702:intron | 35.0% |
| ! | GTTTTCATGGGAATATTTGC+TGG | - | chr3.1:83798304-83798323 | MS.gene32702:intron | 35.0% |
| ! | GTTTTTGTGGGTAGCTATAT+TGG | - | chr3.1:83798535-83798554 | MS.gene32702:intron | 35.0% |
| ! | TCCTGATCATTCCGTTTTAT+GGG | + | chr3.1:83797058-83797077 | None:intergenic | 35.0% |
| ! | TCTAGAATCCTGCAAATGAT+AGG | + | chr3.1:83797016-83797035 | None:intergenic | 35.0% |
| ! | TGCACTATCCTGTATCTTTT+TGG | + | chr3.1:83796494-83796513 | None:intergenic | 35.0% |
| ! | TTGGATTCTATGCATGCTTT+TGG | - | chr3.1:83799013-83799032 | MS.gene32702:CDS | 35.0% |
| !! | ACCATGATATTTGCTATCCT+TGG | - | chr3.1:83798226-83798245 | MS.gene32702:CDS | 35.0% |
| !! | CACATATGATGTTGATTTCC+AGG | - | chr3.1:83797576-83797595 | MS.gene32702:intron | 35.0% |
| !! | CATATTGTTTTGTAGCACCA+TGG | - | chr3.1:83797138-83797157 | MS.gene32702:CDS | 35.0% |
| !! | CCATGATATTTGCTATCCTT+GGG | - | chr3.1:83798227-83798246 | MS.gene32702:CDS | 35.0% |
| !! | CTCTGGTCTTTTTATGGTTT+GGG | - | chr3.1:83798497-83798516 | MS.gene32702:intron | 35.0% |
| !! | GATTTGCTGTGTGTTTATGT+TGG | - | chr3.1:83798169-83798188 | MS.gene32702:CDS | 35.0% |
| !! | GGGATTTTGTTTGTTTTCAC+AGG | + | chr3.1:83798586-83798605 | None:intergenic | 35.0% |
| !! | TGTTTGCTCTGGTCTTTTTA+TGG | - | chr3.1:83798491-83798510 | MS.gene32702:intron | 35.0% |
| !! | TTATTATCCGCTTTTGCCTT+TGG | - | chr3.1:83797881-83797900 | MS.gene32702:intron | 35.0% |
| !!! | AGCTTCTTATGCGTTTTTTG+TGG | - | chr3.1:83798978-83798997 | MS.gene32702:CDS | 35.0% |
| !!! | GGAACAGGTGTTCAATTTTT+TGG | - | chr3.1:83798190-83798209 | MS.gene32702:CDS | 35.0% |
| !!! | TATGCGTTTTTTGTGGTTAC+CGG | - | chr3.1:83798985-83799004 | MS.gene32702:CDS | 35.0% |
| !!! | TCAGTTCCACTTGTTTTTGT+GGG | - | chr3.1:83798523-83798542 | MS.gene32702:intron | 35.0% |
| AACCACATTTGCAGAGTTGA+TGG | - | chr3.1:83796666-83796685 | MS.gene32702:CDS | 40.0% | |
| AACTGAATCTGCTAGAATCG+TGG | - | chr3.1:83797287-83797306 | MS.gene32702:intron | 40.0% | |
| AATGTAATGCAGCTATCTGC+TGG | - | chr3.1:83796249-83796268 | MS.gene32702:CDS | 40.0% | |
| ACAAACCGTGCAATCAAAGT+TGG | + | chr3.1:83796044-83796063 | None:intergenic | 40.0% | |
| ACTGAATCTGCTAGAATCGT+GGG | - | chr3.1:83797288-83797307 | MS.gene32702:intron | 40.0% | |
| AGCAAATCTGAGTTGTTAGG+GGG | + | chr3.1:83798157-83798176 | None:intergenic | 40.0% | |
| ATGGAAACCAAGCTGATAGA+CGG | + | chr3.1:83797086-83797105 | None:intergenic | 40.0% | |
| ATTGGGGGAATACTTCCATT+TGG | - | chr3.1:83798658-83798677 | MS.gene32702:intron | 40.0% | |
| ATTGGTGTGAGGGTTGAAAT+TGG | - | chr3.1:83797683-83797702 | MS.gene32702:intron | 40.0% | |
| CAAGCTTGAAATCACAAAGC+TGG | - | chr3.1:83798921-83798940 | MS.gene32702:intron | 40.0% | |
| CAATCAAAACAGAGAAGGCT+GGG | + | chr3.1:83798642-83798661 | None:intergenic | 40.0% | |
| CACAGCAAATCTGAGTTGTT+AGG | + | chr3.1:83798160-83798179 | None:intergenic | 40.0% | |
| CAGCAAATCTGAGTTGTTAG+GGG | + | chr3.1:83798158-83798177 | None:intergenic | 40.0% | |
| CAGGATAGTGCAGAAAATCT+TGG | - | chr3.1:83796502-83796521 | MS.gene32702:CDS | 40.0% | |
| CCCAAGGATAGCAAATATCA+TGG | + | chr3.1:83798230-83798249 | None:intergenic | 40.0% | |
| CCCACAACATTACACATTTG+TGG | + | chr3.1:83796838-83796857 | None:intergenic | 40.0% | |
| CGCTCCACAAGATTTCTTTA+AGG | - | chr3.1:83795720-83795739 | MS.gene32702:CDS | 40.0% | |
| CGGTAAATGCCAAATGATTG+TGG | + | chr3.1:83797245-83797264 | None:intergenic | 40.0% | |
| CTGTGTGTTTATGTTGGAAC+AGG | - | chr3.1:83798175-83798194 | MS.gene32702:CDS | 40.0% | |
| GAAGATCAATGACGAGTATC+GGG | - | chr3.1:83796900-83796919 | MS.gene32702:intron | 40.0% | |
| GCCACAAATGTGTAATGTTG+TGG | - | chr3.1:83796834-83796853 | MS.gene32702:intron | 40.0% | |
| GGAACAGTTAACCTCTGAAT+TGG | - | chr3.1:83796641-83796660 | MS.gene32702:CDS | 40.0% | |
| GGATAGTGCAGAAAATCTTG+GGG | - | chr3.1:83796504-83796523 | MS.gene32702:CDS | 40.0% | |
| GGATGATGAAGACCAAAAAG+AGG | + | chr3.1:83798756-83798775 | None:intergenic | 40.0% | |
| GTTTCCATGTTGGACTCAAA+GGG | - | chr3.1:83797098-83797117 | MS.gene32702:intron | 40.0% | |
| TAGCTACCCACAAAAACAAG+TGG | + | chr3.1:83798532-83798551 | None:intergenic | 40.0% | |
| TATCAGCTTGGTTTCCATGT+TGG | - | chr3.1:83797088-83797107 | MS.gene32702:intron | 40.0% | |
| TCAAGAAGTTGAAGAGAGCA+AGG | - | chr3.1:83797543-83797562 | MS.gene32702:intron | 40.0% | |
| TCCCATAAAACGGAATGATC+AGG | - | chr3.1:83797054-83797073 | MS.gene32702:intron | 40.0% | |
| TCTTTATCCTCACCTCAATC+TGG | - | chr3.1:83798701-83798720 | MS.gene32702:intron | 40.0% | |
| TGGGTAATCGCTCATTAACT+TGG | - | chr3.1:83796686-83796705 | MS.gene32702:CDS | 40.0% | |
| TTCACAGGATTCTCAATTGC+AGG | + | chr3.1:83798571-83798590 | None:intergenic | 40.0% | |
| TTGATATACGGAGGATTGTG+AGG | - | chr3.1:83795963-83795982 | MS.gene32702:CDS | 40.0% | |
| TTGCTCTCTTCAACTTCTTG+AGG | + | chr3.1:83797544-83797563 | None:intergenic | 40.0% | |
| TTGTCCATGGGGATGTATTT+AGG | - | chr3.1:83798131-83798150 | MS.gene32702:intron | 40.0% | |
| TTTCAGCACAAGTGACAACA+AGG | + | chr3.1:83798777-83798796 | None:intergenic | 40.0% | |
| TTTGTGGTTACCGGTACTAT+TGG | - | chr3.1:83798994-83799013 | MS.gene32702:CDS | 40.0% | |
| ! | ACCACATTTGCAGAGTTGAT+GGG | - | chr3.1:83796667-83796686 | MS.gene32702:CDS | 40.0% |
| ! | ATTTGGGGCCAAAAATCATC+TGG | - | chr3.1:83798448-83798467 | MS.gene32702:intron | 40.0% |
| ! | CAGCTTTGTGATTTCAAGCT+TGG | + | chr3.1:83798923-83798942 | None:intergenic | 40.0% |
| ! | CATACATGAATTAGGCACTG+AGG | - | chr3.1:83797658-83797677 | MS.gene32702:CDS | 40.0% |
| ! | GTTGAAATTGGTCTGTCGTT+TGG | - | chr3.1:83797695-83797714 | MS.gene32702:intron | 40.0% |
| !! | CATCTTTGGGTTCCTCTTTT+TGG | - | chr3.1:83798741-83798760 | MS.gene32702:intron | 40.0% |
| !! | CTATACCCTGTGCTTTAGAA+TGG | - | chr3.1:83797628-83797647 | MS.gene32702:CDS | 40.0% |
| !! | GAATTAGGCACTGAGGTAAT+TGG | - | chr3.1:83797665-83797684 | MS.gene32702:CDS | 40.0% |
| !! | GCTCTGGTCTTTTTATGGTT+TGG | - | chr3.1:83798496-83798515 | MS.gene32702:intron | 40.0% |
| !! | TGGTTTTGCCTATCATTTGC+AGG | - | chr3.1:83797005-83797024 | MS.gene32702:intron | 40.0% |
| !!! | AGCCTTCTCTGTTTTGATTG+GGG | - | chr3.1:83798642-83798661 | MS.gene32702:intron | 40.0% |
| !!! | ATGCATGCTTTTGGTTCACA+AGG | - | chr3.1:83799022-83799041 | MS.gene32702:CDS | 40.0% |
| !!! | CAGCCTTCTCTGTTTTGATT+GGG | - | chr3.1:83798641-83798660 | MS.gene32702:intron | 40.0% |
| !!! | CTCAGTTCCACTTGTTTTTG+TGG | - | chr3.1:83798522-83798541 | MS.gene32702:intron | 40.0% |
| !!! | CTCTTGGTTTGGGTTTTCAT+GGG | - | chr3.1:83798292-83798311 | MS.gene32702:intron | 40.0% |
| AACGAATGTACAGAGCAAGG+AGG | - | chr3.1:83797206-83797225 | MS.gene32702:CDS | 45.0% | |
| AATCTTGGGGAAGTTCTTCG+TGG | - | chr3.1:83796517-83796536 | MS.gene32702:CDS | 45.0% | |
| ACAACTGTGTGCTTAGCATG+AGG | + | chr3.1:83797508-83797527 | None:intergenic | 45.0% | |
| ACCCATCAACTCTGCAAATG+TGG | + | chr3.1:83796671-83796690 | None:intergenic | 45.0% | |
| AGAGACAATTGCAGGGAACA+AGG | + | chr3.1:83798401-83798420 | None:intergenic | 45.0% | |
| AGGGTCACATGTTGTCAAAC+GGG | + | chr3.1:83797488-83797507 | None:intergenic | 45.0% | |
| AGTAATCCTCACTGCACAAC+TGG | + | chr3.1:83798822-83798841 | None:intergenic | 45.0% | |
| AGTGGAAAAGAATTGCCCTC+AGG | - | chr3.1:83798368-83798387 | MS.gene32702:intron | 45.0% | |
| ATAGCAGCCAAAGGCAAAAG+CGG | + | chr3.1:83797891-83797910 | None:intergenic | 45.0% | |
| CAACTGTGTGCTTAGCATGA+GGG | + | chr3.1:83797507-83797526 | None:intergenic | 45.0% | |
| CACTGAGGTAATTGGTGTGA+GGG | - | chr3.1:83797673-83797692 | MS.gene32702:intron | 45.0% | |
| CCAATCAAAACAGAGAAGGC+TGG | + | chr3.1:83798643-83798662 | None:intergenic | 45.0% | |
| CTGAACGAATGTACAGAGCA+AGG | - | chr3.1:83797203-83797222 | MS.gene32702:CDS | 45.0% | |
| CTTCCAACCAGTCTCTTCTT+GGG | + | chr3.1:83798110-83798129 | None:intergenic | 45.0% | |
| GAAAACCCAAACCAAGAGCA+TGG | + | chr3.1:83798290-83798309 | None:intergenic | 45.0% | |
| GAGGGTCACATGTTGTCAAA+CGG | + | chr3.1:83797489-83797508 | None:intergenic | 45.0% | |
| GATTCAACCAGATTGAGGTG+AGG | + | chr3.1:83798711-83798730 | None:intergenic | 45.0% | |
| GATTCTACCGTCTATCAGCT+TGG | - | chr3.1:83797076-83797095 | MS.gene32702:intron | 45.0% | |
| GGTTTCCATGTTGGACTCAA+AGG | - | chr3.1:83797097-83797116 | MS.gene32702:intron | 45.0% | |
| TATCAGCTCATAAGCTCACC+TGG | + | chr3.1:83797597-83797616 | None:intergenic | 45.0% | |
| TCCCCCAATCAAAACAGAGA+AGG | + | chr3.1:83798647-83798666 | None:intergenic | 45.0% | |
| TGTGCAGTGAGGATTACTTG+TGG | - | chr3.1:83798824-83798843 | MS.gene32702:intron | 45.0% | |
| ! | ATGTGAAGTGGGCTTCAAGA+TGG | - | chr3.1:83797924-83797943 | MS.gene32702:intron | 45.0% |
| ! | GAAATTGGTCTGTCGTTTGG+CGG | - | chr3.1:83797698-83797717 | MS.gene32702:intron | 45.0% |
| ! | GCACAGCTCCAGATGATTTT+TGG | + | chr3.1:83798459-83798478 | None:intergenic | 45.0% |
| ! | TGTGAAGTGGGCTTCAAGAT+GGG | - | chr3.1:83797925-83797944 | MS.gene32702:intron | 45.0% |
| !! | ATCTTTTTGGGGGCAGGATA+AGG | + | chr3.1:83796481-83796500 | None:intergenic | 45.0% |
| !! | GCTTTGAGGTTAAGCCATTC+AGG | - | chr3.1:83797310-83797329 | MS.gene32702:intron | 45.0% |
| !!! | CCAGCCTTCTCTGTTTTGAT+TGG | - | chr3.1:83798640-83798659 | MS.gene32702:intron | 45.0% |
| !!! | GCCTTCTCTGTTTTGATTGG+GGG | - | chr3.1:83798643-83798662 | MS.gene32702:intron | 45.0% |
| !!! | GCTCTTGGTTTGGGTTTTCA+TGG | - | chr3.1:83798291-83798310 | MS.gene32702:intron | 45.0% |
| AAGCCCAAGAAGAGACTGGT+TGG | - | chr3.1:83798104-83798123 | MS.gene32702:intron | 50.0% | |
| ACTCAAAGGGCAGTATACCG+GGG | - | chr3.1:83797111-83797130 | MS.gene32702:intron | 50.0% | |
| ACTGCCCTTTGAGTCCAACA+TGG | + | chr3.1:83797105-83797124 | None:intergenic | 50.0% | |
| ACTGGTTGGAAGCTTGTCCA+TGG | - | chr3.1:83798118-83798137 | MS.gene32702:intron | 50.0% | |
| AGAAGGAGAAAGCGGTGTGA+AGG | + | chr3.1:83795687-83795706 | None:intergenic | 50.0% | |
| CTACTTCCAGTTGTGCAGTG+AGG | - | chr3.1:83798813-83798832 | MS.gene32702:intron | 50.0% | |
| CTCTTCTTGGGCTTCTTCCT+GGG | + | chr3.1:83798098-83798117 | None:intergenic | 50.0% | |
| CTGGAAGTAGCAGAGCACAA+TGG | + | chr3.1:83798803-83798822 | None:intergenic | 50.0% | |
| CTGGTTGGAAGCTTGTCCAT+GGG | - | chr3.1:83798119-83798138 | MS.gene32702:intron | 50.0% | |
| GAACAAGGTTGCAGTCCTGA+GGG | + | chr3.1:83798386-83798405 | None:intergenic | 50.0% | |
| GAAGAAGCCCAAGAAGAGAC+TGG | - | chr3.1:83798100-83798119 | MS.gene32702:intron | 50.0% | |
| GACAGCCATGCTCTTGGTTT+GGG | - | chr3.1:83798282-83798301 | MS.gene32702:CDS | 50.0% | |
| GACTCAAAGGGCAGTATACC+GGG | - | chr3.1:83797110-83797129 | MS.gene32702:intron | 50.0% | |
| GCACTGAGGTAATTGGTGTG+AGG | - | chr3.1:83797672-83797691 | MS.gene32702:intron | 50.0% | |
| GCAGGAGAGTGATGTGAAGT+GGG | - | chr3.1:83797913-83797932 | MS.gene32702:intron | 50.0% | |
| GCAGTGAGGATTACTTGTGG+TGG | - | chr3.1:83798827-83798846 | MS.gene32702:intron | 50.0% | |
| GCTTCCAACCAGTCTCTTCT+TGG | + | chr3.1:83798111-83798130 | None:intergenic | 50.0% | |
| GCTTTCTCCTTCTACCTTCC+CGG | - | chr3.1:83795694-83795713 | MS.gene32702:CDS | 50.0% | |
| GGACTCAAAGGGCAGTATAC+CGG | - | chr3.1:83797109-83797128 | MS.gene32702:intron | 50.0% | |
| GGGAAGGTAGAAGGAGAAAG+CGG | + | chr3.1:83795695-83795714 | None:intergenic | 50.0% | |
| GGTTCCTCTCTCCTTCAAAC+CGG | - | chr3.1:83798248-83798267 | MS.gene32702:CDS | 50.0% | |
| GTATAACGAGCTTGAGACCC+AGG | - | chr3.1:83798078-83798097 | MS.gene32702:intron | 50.0% | |
| GTGAGGATTACTTGTGGTGG+TGG | - | chr3.1:83798830-83798849 | MS.gene32702:intron | 50.0% | |
| GTGCGGAAGAACCAGAAGTA+AGG | + | chr3.1:83798864-83798883 | None:intergenic | 50.0% | |
| GTTCCTCTCTCCTTCAAACC+GGG | - | chr3.1:83798249-83798268 | MS.gene32702:CDS | 50.0% | |
| TCCTGCCCCCAAAAAGATAC+AGG | - | chr3.1:83796483-83796502 | MS.gene32702:CDS | 50.0% | |
| TCTCTTCTTGGGCTTCTTCC+TGG | + | chr3.1:83798099-83798118 | None:intergenic | 50.0% | |
| TGACAGCCATGCTCTTGGTT+TGG | - | chr3.1:83798281-83798300 | MS.gene32702:CDS | 50.0% | |
| TGCAGGAGAGTGATGTGAAG+TGG | - | chr3.1:83797912-83797931 | MS.gene32702:intron | 50.0% | |
| TGCTAGAATCGTGGGCTTTG+AGG | - | chr3.1:83797296-83797315 | MS.gene32702:intron | 50.0% | |
| TGGCGGTCATACCTTACTTC+TGG | - | chr3.1:83798850-83798869 | MS.gene32702:intron | 50.0% | |
| TGGTTGGAAGCTTGTCCATG+GGG | - | chr3.1:83798120-83798139 | MS.gene32702:intron | 50.0% | |
| TGTTCTCTTCCTTTCGGGCA+TGG | - | chr3.1:83798012-83798031 | MS.gene32702:intron | 50.0% | |
| TTCCTCTCTCCTTCAAACCG+GGG | - | chr3.1:83798250-83798269 | MS.gene32702:CDS | 50.0% | |
| TTGAAGGAGAGAGGAACCCA+AGG | + | chr3.1:83798246-83798265 | None:intergenic | 50.0% | |
| ! | TCATCTGGAGCTGTGCCATT+TGG | - | chr3.1:83798463-83798482 | MS.gene32702:intron | 50.0% |
| !! | AGGATTACTTGTGGTGGTGG+CGG | - | chr3.1:83798833-83798852 | MS.gene32702:intron | 50.0% |
| !! | TCCTGTATCTTTTTGGGGGC+AGG | + | chr3.1:83796487-83796506 | None:intergenic | 50.0% |
| AAATCTTGTGGAGCGACGCC+GGG | + | chr3.1:83795715-83795734 | None:intergenic | 55.0% | |
| CTCCTGCAGATAGCAGCCAA+AGG | + | chr3.1:83797900-83797919 | None:intergenic | 55.0% | |
| GAAATCTTGTGGAGCGACGC+CGG | + | chr3.1:83795716-83795735 | None:intergenic | 55.0% | |
| GAAGGCTGGGTTCATGTACC+AGG | + | chr3.1:83798629-83798648 | None:intergenic | 55.0% | |
| GCTCATGACAGCCATGCTCT+TGG | - | chr3.1:83798276-83798295 | MS.gene32702:CDS | 55.0% | |
| GGAACAAGGTTGCAGTCCTG+AGG | + | chr3.1:83798387-83798406 | None:intergenic | 55.0% | |
| GGGGCCTAAATACATCCCCA+TGG | + | chr3.1:83798138-83798157 | None:intergenic | 55.0% | |
| TCATGTACCAGGCCTGCTCA+GGG | + | chr3.1:83798618-83798637 | None:intergenic | 55.0% | |
| TCATTGCCACCATGCCCGAA+AGG | + | chr3.1:83798024-83798043 | None:intergenic | 55.0% | |
| TCTCTCCTTCAAACCGGGGT+GGG | - | chr3.1:83798254-83798273 | MS.gene32702:CDS | 55.0% | |
| TCTCTTCCTTTCGGGCATGG+TGG | - | chr3.1:83798015-83798034 | MS.gene32702:intron | 55.0% | |
| TGCCTTTGGCTGCTATCTGC+AGG | - | chr3.1:83797895-83797914 | MS.gene32702:intron | 55.0% | |
| TTCATGTACCAGGCCTGCTC+AGG | + | chr3.1:83798619-83798638 | None:intergenic | 55.0% | |
| CCTGCTCAGGGATCTGCCTT+GGG | + | chr3.1:83798606-83798625 | None:intergenic | 60.0% | |
| CTCTCTCCTTCAAACCGGGG+TGG | - | chr3.1:83798253-83798272 | MS.gene32702:CDS | 60.0% | |
| ! | ATGAGCCCACCCCGGTTTGA+AGG | + | chr3.1:83798262-83798281 | None:intergenic | 60.0% |
| ! | CACCCCGGTTTGAAGGAGAG+AGG | + | chr3.1:83798255-83798274 | None:intergenic | 60.0% |
| AGCGACGCCGGGAAGGTAGA+AGG | + | chr3.1:83795704-83795723 | None:intergenic | 65.0% | |
| CCCAAGGCAGATCCCTGAGC+AGG | - | chr3.1:83798603-83798622 | MS.gene32702:intron | 65.0% | |
| GCCTGCTCAGGGATCTGCCT+TGG | + | chr3.1:83798607-83798626 | None:intergenic | 65.0% | |
| TGGCTGTCATGAGCCCACCC+CGG | + | chr3.1:83798270-83798289 | None:intergenic | 65.0% | |
| CTTGTGGAGCGACGCCGGGA+AGG | + | chr3.1:83795711-83795730 | None:intergenic | 70.0% | |
| GGCAGATCCCTGAGCAGGCC+TGG | - | chr3.1:83798608-83798627 | MS.gene32702:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 83795637 | 83799074 | 83795637 | ID=MS.gene32702 |
| chr3.1 | mRNA | 83795637 | 83799074 | 83795637 | ID=MS.gene32702.t1;Parent=MS.gene32702 |
| chr3.1 | exon | 83798970 | 83799074 | 83798970 | ID=MS.gene32702.t1.exon1;Parent=MS.gene32702.t1 |
| chr3.1 | CDS | 83798970 | 83799074 | 83798970 | ID=cds.MS.gene32702.t1;Parent=MS.gene32702.t1 |
| chr3.1 | exon | 83798144 | 83798308 | 83798144 | ID=MS.gene32702.t1.exon2;Parent=MS.gene32702.t1 |
| chr3.1 | CDS | 83798144 | 83798308 | 83798144 | ID=cds.MS.gene32702.t1;Parent=MS.gene32702.t1 |
| chr3.1 | exon | 83797782 | 83797891 | 83797782 | ID=MS.gene32702.t1.exon3;Parent=MS.gene32702.t1 |
| chr3.1 | CDS | 83797782 | 83797891 | 83797782 | ID=cds.MS.gene32702.t1;Parent=MS.gene32702.t1 |
| chr3.1 | exon | 83797579 | 83797684 | 83797579 | ID=MS.gene32702.t1.exon4;Parent=MS.gene32702.t1 |
| chr3.1 | CDS | 83797579 | 83797684 | 83797579 | ID=cds.MS.gene32702.t1;Parent=MS.gene32702.t1 |
| chr3.1 | exon | 83797380 | 83797492 | 83797380 | ID=MS.gene32702.t1.exon5;Parent=MS.gene32702.t1 |
| chr3.1 | CDS | 83797380 | 83797492 | 83797380 | ID=cds.MS.gene32702.t1;Parent=MS.gene32702.t1 |
| chr3.1 | exon | 83797114 | 83797267 | 83797114 | ID=MS.gene32702.t1.exon6;Parent=MS.gene32702.t1 |
| chr3.1 | CDS | 83797114 | 83797267 | 83797114 | ID=cds.MS.gene32702.t1;Parent=MS.gene32702.t1 |
| chr3.1 | exon | 83795637 | 83796794 | 83795637 | ID=MS.gene32702.t1.exon7;Parent=MS.gene32702.t1 |
| chr3.1 | CDS | 83795637 | 83796794 | 83795637 | ID=cds.MS.gene32702.t1;Parent=MS.gene32702.t1 |
| Gene Sequence |
| Protein sequence |
