Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42664.t1 | XP_003603291.1 | 99.8 | 636 | 1 | 0 | 1 | 636 | 1 | 636 | 0.00E+00 | 1255.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42664.t1 | Q9C5N2 | 83.3 | 645 | 98 | 3 | 1 | 636 | 1 | 644 | 2.5e-312 | 1072.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42664.t1 | G7J9U2 | 99.8 | 636 | 1 | 0 | 1 | 636 | 1 | 636 | 0.0e+00 | 1255.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052289 | MS.gene42664 | 0.827642 | 1.40E-54 | -1.69E-46 |
| MS.gene057195 | MS.gene42664 | 0.808955 | 2.40E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene36542 | MS.gene42664 | PPI |
| MS.gene014910 | MS.gene42664 | PPI |
| MS.gene058486 | MS.gene42664 | PPI |
| MS.gene011190 | MS.gene42664 | PPI |
| MS.gene57710 | MS.gene42664 | PPI |
| MS.gene33117 | MS.gene42664 | PPI |
| MS.gene36992 | MS.gene42664 | PPI |
| MS.gene42664 | MS.gene80181 | PPI |
| MS.gene80181 | MS.gene42664 | PPI |
| MS.gene42664 | MS.gene020254 | PPI |
| MS.gene051485 | MS.gene42664 | PPI |
| MS.gene80184 | MS.gene42664 | PPI |
| MS.gene32702 | MS.gene42664 | PPI |
| MS.gene36990 | MS.gene42664 | PPI |
| MS.gene42664 | MS.gene036639 | PPI |
| MS.gene58761 | MS.gene42664 | PPI |
| MS.gene016086 | MS.gene42664 | PPI |
| MS.gene041418 | MS.gene42664 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42664.t1 | MTR_3g105950 | 99.843 | 636 | 1 | 0 | 1 | 636 | 1 | 636 | 0.0 | 1307 |
| MS.gene42664.t1 | MTR_1g014080 | 89.655 | 638 | 63 | 3 | 1 | 636 | 1 | 637 | 0.0 | 1160 |
| MS.gene42664.t1 | MTR_8g016270 | 75.475 | 632 | 153 | 2 | 6 | 636 | 18 | 648 | 0.0 | 999 |
| MS.gene42664.t1 | MTR_5g098730 | 45.023 | 653 | 301 | 14 | 22 | 636 | 33 | 665 | 0.0 | 531 |
| MS.gene42664.t1 | MTR_3g082140 | 44.720 | 644 | 316 | 15 | 22 | 636 | 27 | 659 | 2.89e-179 | 524 |
| MS.gene42664.t1 | MTR_0204s0010 | 48.690 | 458 | 212 | 7 | 191 | 636 | 2 | 448 | 1.30e-150 | 443 |
| MS.gene42664.t1 | MTR_6g074910 | 32.237 | 608 | 357 | 8 | 35 | 636 | 30 | 588 | 6.43e-111 | 345 |
| MS.gene42664.t1 | MTR_5g077170 | 32.072 | 608 | 360 | 8 | 35 | 636 | 31 | 591 | 4.63e-110 | 343 |
| MS.gene42664.t1 | MTR_8g088730 | 33.225 | 614 | 343 | 10 | 35 | 636 | 31 | 589 | 8.33e-100 | 317 |
| MS.gene42664.t1 | MTR_2g006300 | 33.607 | 610 | 340 | 9 | 37 | 636 | 29 | 583 | 2.01e-96 | 308 |
| MS.gene42664.t1 | MTR_4g053270 | 30.744 | 605 | 362 | 10 | 36 | 634 | 34 | 587 | 3.01e-86 | 281 |
| MS.gene42664.t1 | MTR_7g060560 | 87.288 | 118 | 15 | 0 | 91 | 208 | 274 | 391 | 1.29e-63 | 215 |
| MS.gene42664.t1 | MTR_3g090510 | 81.967 | 122 | 20 | 1 | 87 | 208 | 275 | 394 | 1.68e-60 | 207 |
| MS.gene42664.t1 | MTR_5g014340 | 79.439 | 107 | 17 | 1 | 93 | 199 | 1 | 102 | 4.50e-43 | 155 |
| MS.gene42664.t1 | MTR_4g116770 | 40.704 | 199 | 101 | 6 | 1 | 193 | 1 | 188 | 4.63e-33 | 135 |
| MS.gene42664.t1 | MTR_0249s0060 | 85.294 | 68 | 10 | 0 | 93 | 160 | 1 | 68 | 4.82e-28 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42664.t1 | AT5G25100 | 83.256 | 645 | 98 | 3 | 1 | 636 | 1 | 644 | 0.0 | 1092 |
| MS.gene42664.t1 | AT5G10840 | 82.535 | 647 | 101 | 3 | 1 | 636 | 3 | 648 | 0.0 | 1091 |
| MS.gene42664.t1 | AT5G25100 | 82.362 | 652 | 98 | 4 | 1 | 636 | 1 | 651 | 0.0 | 1087 |
| MS.gene42664.t1 | AT2G24170 | 80.408 | 638 | 122 | 3 | 1 | 636 | 1 | 637 | 0.0 | 1048 |
| MS.gene42664.t1 | AT3G13772 | 76.136 | 616 | 145 | 2 | 22 | 636 | 27 | 641 | 0.0 | 991 |
| MS.gene42664.t1 | AT1G55130 | 73.899 | 636 | 162 | 3 | 4 | 636 | 3 | 637 | 0.0 | 979 |
| MS.gene42664.t1 | AT2G24170 | 76.629 | 445 | 101 | 3 | 1 | 443 | 1 | 444 | 0.0 | 710 |
| MS.gene42664.t1 | AT5G35160 | 44.678 | 667 | 304 | 13 | 13 | 636 | 14 | 658 | 0.0 | 540 |
| MS.gene42664.t1 | AT5G35160 | 44.678 | 667 | 304 | 13 | 13 | 636 | 14 | 658 | 0.0 | 540 |
| MS.gene42664.t1 | AT5G35160 | 44.678 | 667 | 304 | 13 | 13 | 636 | 14 | 658 | 0.0 | 540 |
| MS.gene42664.t1 | AT4G12650 | 44.359 | 647 | 314 | 12 | 22 | 636 | 20 | 652 | 1.55e-173 | 509 |
| MS.gene42664.t1 | AT5G35160 | 42.643 | 666 | 291 | 13 | 13 | 636 | 14 | 630 | 3.97e-169 | 497 |
| MS.gene42664.t1 | AT2G01970 | 33.224 | 608 | 350 | 8 | 36 | 636 | 34 | 592 | 6.38e-118 | 364 |
| MS.gene42664.t1 | AT5G37310 | 31.905 | 630 | 360 | 10 | 24 | 636 | 16 | 593 | 5.41e-110 | 343 |
| MS.gene42664.t1 | AT5G37310 | 31.905 | 630 | 360 | 10 | 24 | 636 | 16 | 593 | 5.41e-110 | 343 |
| MS.gene42664.t1 | AT1G14670 | 32.120 | 632 | 373 | 8 | 12 | 636 | 10 | 592 | 6.31e-110 | 343 |
| MS.gene42664.t1 | AT1G10950 | 34.272 | 604 | 332 | 11 | 43 | 636 | 41 | 589 | 5.36e-99 | 315 |
| MS.gene42664.t1 | AT1G08350 | 30.866 | 635 | 378 | 12 | 11 | 636 | 7 | 589 | 2.52e-98 | 313 |
| MS.gene42664.t1 | AT1G08350 | 30.866 | 635 | 378 | 12 | 11 | 636 | 7 | 589 | 2.52e-98 | 313 |
| MS.gene42664.t1 | AT1G08350 | 30.948 | 559 | 326 | 11 | 86 | 636 | 2 | 508 | 1.19e-87 | 282 |
| MS.gene42664.t1 | AT1G08350 | 30.017 | 583 | 338 | 12 | 11 | 584 | 7 | 528 | 2.55e-83 | 272 |
Find 145 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTCCACAAGATTTCTTTA+AGG | 0.160692 | 3.1:-83772543 | MS.gene42664:intron |
| TCTCTTCTTGGGCTTCTTCC+TGG | 0.162911 | 3.1:+83770170 | None:intergenic |
| ATGATTGTTCTCTTCCTTTC+GGG | 0.199038 | 3.1:-83770259 | MS.gene42664:CDS |
| AACACGAGTATGATGGTAAA+TGG | 0.258508 | 3.1:-83770817 | MS.gene42664:CDS |
| GACAGCCATGCTCTTGGTTT+GGG | 0.261532 | 3.1:-83769984 | MS.gene42664:CDS |
| CAATAGAGAACCAGTGAATT+TGG | 0.271157 | 3.1:+83770293 | None:intergenic |
| CACATATGATGTTGATTTCC+AGG | 0.271731 | 3.1:-83770690 | MS.gene42664:intron |
| AATGATTGTTCTCTTCCTTT+CGG | 0.275069 | 3.1:-83770260 | MS.gene42664:CDS |
| CTCTTCTTGGGCTTCTTCCT+GGG | 0.277059 | 3.1:+83770171 | None:intergenic |
| TTGTCCATGGGGATGTATTT+AGG | 0.282833 | 3.1:-83770135 | MS.gene42664:CDS |
| TATATTAAATGCTCTCATTT+GGG | 0.284478 | 3.1:-83769834 | MS.gene42664:CDS |
| TGACAGCCATGCTCTTGGTT+TGG | 0.284901 | 3.1:-83769985 | MS.gene42664:CDS |
| GCTTCCAACCAGTCTCTTCT+TGG | 0.285153 | 3.1:+83770158 | None:intergenic |
| GTCATCATTCATTAGCAAAT+AGG | 0.315280 | 3.1:+83770315 | None:intergenic |
| TTGGATTCTATGCATGCTTT+TGG | 0.316198 | 3.1:-83769253 | MS.gene42664:CDS |
| GCTTTGAGGTTAAGCCATTC+AGG | 0.317785 | 3.1:-83770956 | MS.gene42664:intron |
| TTATATTAAATGCTCTCATT+TGG | 0.322327 | 3.1:-83769835 | MS.gene42664:CDS |
| ACCATGATATTTGCTATCCT+TGG | 0.330022 | 3.1:-83770040 | MS.gene42664:CDS |
| TTCACAGGATTCTCAATTGC+AGG | 0.336074 | 3.1:+83769698 | None:intergenic |
| GCCTGCTCAGGGATCTGCCT+TGG | 0.337693 | 3.1:+83769662 | None:intergenic |
| CTTCCAACCAGTCTCTTCTT+GGG | 0.349041 | 3.1:+83770159 | None:intergenic |
| TTCATGTACCAGGCCTGCTC+AGG | 0.350610 | 3.1:+83769650 | None:intergenic |
| TCTTTATCCTCACCTCAATC+TGG | 0.357240 | 3.1:-83769565 | MS.gene42664:CDS |
| TGGCGGTCATACCTTACTTC+TGG | 0.362279 | 3.1:-83769416 | MS.gene42664:CDS |
| CCCACAACATTACACATTTG+TGG | 0.366682 | 3.1:+83771431 | None:intergenic |
| GCTTTCTCCTTCTACCTTCC+CGG | 0.371736 | 3.1:-83772569 | MS.gene42664:CDS |
| GGTTCCTCTCTCCTTCAAAC+CGG | 0.375085 | 3.1:-83770018 | MS.gene42664:CDS |
| AGGATAGTGCAGAAAATCTT+GGG | 0.390517 | 3.1:-83771763 | MS.gene42664:CDS |
| TTTGTGGTTACCGGTACTAT+TGG | 0.395492 | 3.1:-83769272 | MS.gene42664:CDS |
| CCTGCTCAGGGATCTGCCTT+GGG | 0.397639 | 3.1:+83769663 | None:intergenic |
| CTGTGTGTTTATGTTGGAAC+AGG | 0.398214 | 3.1:-83770091 | MS.gene42664:CDS |
| CATGTATCCAAAGTAAAATA+TGG | 0.398933 | 3.1:+83769316 | None:intergenic |
| CACAGCAAATCTGAGTTGTT+AGG | 0.400145 | 3.1:+83770109 | None:intergenic |
| AATAAAATGAGTACGGAAGC+TGG | 0.403462 | 3.1:+83771816 | None:intergenic |
| TGCTAGAATCGTGGGCTTTG+AGG | 0.404094 | 3.1:-83770970 | MS.gene42664:CDS |
| CCATGATATTTGCTATCCTT+GGG | 0.409788 | 3.1:-83770039 | MS.gene42664:CDS |
| CTTTAGTTGTTCCCATAAAA+CGG | 0.410146 | 3.1:-83771222 | MS.gene42664:CDS |
| TGTTCTCTTCCTTTCGGGCA+TGG | 0.411830 | 3.1:-83770254 | MS.gene42664:CDS |
| TCATCTGGAGCTGTGCCATT+TGG | 0.418785 | 3.1:-83769803 | MS.gene42664:CDS |
| CAGCTTTGTGATTTCAAGCT+TGG | 0.419934 | 3.1:+83769346 | None:intergenic |
| CAGGATAGTGCAGAAAATCT+TGG | 0.422003 | 3.1:-83771764 | MS.gene42664:CDS |
| AGTAATCCTCACTGCACAAC+TGG | 0.425366 | 3.1:+83769447 | None:intergenic |
| ATTTGGTACAATGTTTGCTC+TGG | 0.433667 | 3.1:-83769786 | MS.gene42664:CDS |
| GTTCCTCTCTCCTTCAAACC+GGG | 0.434696 | 3.1:-83770017 | MS.gene42664:CDS |
| ACAGCAAATCTGAGTTGTTA+GGG | 0.443885 | 3.1:+83770110 | None:intergenic |
| AGCGACGCCGGGAAGGTAGA+AGG | 0.446747 | 3.1:+83772562 | None:intergenic |
| GACTCAAAGGGCAGTATACC+GGG | 0.448506 | 3.1:-83771156 | MS.gene42664:CDS |
| GCTCATGACAGCCATGCTCT+TGG | 0.449410 | 3.1:-83769990 | MS.gene42664:CDS |
| CATTGAAAATTCACTATATG+TGG | 0.454070 | 3.1:-83771720 | MS.gene42664:intron |
| GGTTTCCATGTTGGACTCAA+AGG | 0.456598 | 3.1:-83771169 | MS.gene42664:CDS |
| GGCAGATCCCTGAGCAGGCC+TGG | 0.457305 | 3.1:-83769658 | MS.gene42664:CDS |
| CACATCTCTATGATACTTGA+CGG | 0.457417 | 3.1:+83771004 | None:intergenic |
| TCCCATAAAACGGAATGATC+AGG | 0.460700 | 3.1:-83771212 | MS.gene42664:CDS |
| AAAATGACAGAGACAATTGC+AGG | 0.461385 | 3.1:+83769860 | None:intergenic |
| TATCAGCTTGGTTTCCATGT+TGG | 0.466494 | 3.1:-83771178 | MS.gene42664:CDS |
| TTGCTCTCTTCAACTTCTTG+AGG | 0.468169 | 3.1:+83770725 | None:intergenic |
| AGAAGATCAATGACGAGTAT+CGG | 0.469743 | 3.1:-83771367 | MS.gene42664:CDS |
| GGACTCAAAGGGCAGTATAC+CGG | 0.471498 | 3.1:-83771157 | MS.gene42664:CDS |
| GAAGATCAATGACGAGTATC+GGG | 0.473535 | 3.1:-83771366 | MS.gene42664:CDS |
| AGAAGGAGAAAGCGGTGTGA+AGG | 0.477134 | 3.1:+83772579 | None:intergenic |
| GAAATCTTGTGGAGCGACGC+CGG | 0.479883 | 3.1:+83772550 | None:intergenic |
| GATTTGCTGTGTGTTTATGT+TGG | 0.480715 | 3.1:-83770097 | MS.gene42664:CDS |
| TCTCTCCTTCAAACCGGGGT+GGG | 0.482513 | 3.1:-83770012 | MS.gene42664:CDS |
| ATGAGCCCACCCCGGTTTGA+AGG | 0.482813 | 3.1:+83770007 | None:intergenic |
| GAGGGTCACATGTTGTCAAA+CGG | 0.488799 | 3.1:+83770780 | None:intergenic |
| GTTTCCATGTTGGACTCAAA+GGG | 0.490076 | 3.1:-83771168 | MS.gene42664:CDS |
| AGGGTCACATGTTGTCAAAC+GGG | 0.490682 | 3.1:+83770781 | None:intergenic |
| ACACGAGTATGATGGTAAAT+GGG | 0.490956 | 3.1:-83770816 | MS.gene42664:CDS |
| AGAATGTTGCATAAAGAAAG+AGG | 0.493377 | 3.1:+83769378 | None:intergenic |
| CCAATCAAAACAGAGAAGGC+TGG | 0.495505 | 3.1:+83769626 | None:intergenic |
| GGAAGTGAATAAAATGAGTA+CGG | 0.496741 | 3.1:+83771809 | None:intergenic |
| AAATCTTGTGGAGCGACGCC+GGG | 0.513081 | 3.1:+83772551 | None:intergenic |
| GAAGGCTGGGTTCATGTACC+AGG | 0.517535 | 3.1:+83769640 | None:intergenic |
| ACTGGTTGGAAGCTTGTCCA+TGG | 0.517914 | 3.1:-83770148 | MS.gene42664:CDS |
| GATTCTACCGTCTATCAGCT+TGG | 0.519977 | 3.1:-83771190 | MS.gene42664:CDS |
| CTCTCTCCTTCAAACCGGGG+TGG | 0.526606 | 3.1:-83770013 | MS.gene42664:CDS |
| AGAGCAAACATTGTACCAAA+TGG | 0.527636 | 3.1:+83769788 | None:intergenic |
| CCCAAGGCAGATCCCTGAGC+AGG | 0.531266 | 3.1:-83769663 | MS.gene42664:CDS |
| CCCAAGGATAGCAAATATCA+TGG | 0.533552 | 3.1:+83770039 | None:intergenic |
| AAGCCCAAGAAGAGACTGGT+TGG | 0.534521 | 3.1:-83770162 | MS.gene42664:CDS |
| CAATCAAAACAGAGAAGGCT+GGG | 0.541967 | 3.1:+83769627 | None:intergenic |
| GTATAACGAGCTTGAGACCC+AGG | 0.542211 | 3.1:-83770188 | MS.gene42664:CDS |
| ATATTAAATGCTCTCATTTG+GGG | 0.542556 | 3.1:-83769833 | MS.gene42664:CDS |
| GCCACAAATGTGTAATGTTG+TGG | 0.542830 | 3.1:-83771432 | MS.gene42664:CDS |
| CTGGTTGGAAGCTTGTCCAT+GGG | 0.544476 | 3.1:-83770147 | MS.gene42664:CDS |
| TGCATAGAATCCAATAGTAC+CGG | 0.547684 | 3.1:+83769262 | None:intergenic |
| GTGCGGAAGAACCAGAAGTA+AGG | 0.547713 | 3.1:+83769405 | None:intergenic |
| CGCTTGTACAAAATGTTCAA+AGG | 0.556072 | 3.1:-83769926 | MS.gene42664:CDS |
| TCAAGAAGTTGAAGAGAGCA+AGG | 0.556425 | 3.1:-83770723 | MS.gene42664:CDS |
| ACTGAATCTGCTAGAATCGT+GGG | 0.559429 | 3.1:-83770978 | MS.gene42664:CDS |
| ATAAAATGAGTACGGAAGCT+GGG | 0.562743 | 3.1:+83771817 | None:intergenic |
| ATGTGAAGTGGGCTTCAAGA+TGG | 0.563049 | 3.1:-83770342 | MS.gene42664:CDS |
| GGAACAAGGTTGCAGTCCTG+AGG | 0.563341 | 3.1:+83769882 | None:intergenic |
| CAAGCTTGAAATCACAAAGC+TGG | 0.563454 | 3.1:-83769345 | MS.gene42664:CDS |
| CGGTAAATGCCAAATGATTG+TGG | 0.563495 | 3.1:+83771024 | None:intergenic |
| TCATGTACCAGGCCTGCTCA+GGG | 0.566599 | 3.1:+83769651 | None:intergenic |
| TCAATGAAAACAGCTCCAAA+TGG | 0.567404 | 3.1:+83769593 | None:intergenic |
| AAACTGATTCAACCAGATTG+AGG | 0.568595 | 3.1:+83769553 | None:intergenic |
| AACTGAATCTGCTAGAATCG+TGG | 0.569950 | 3.1:-83770979 | MS.gene42664:CDS |
| GAAGAAGCCCAAGAAGAGAC+TGG | 0.572886 | 3.1:-83770166 | MS.gene42664:CDS |
| TTATGGGAACAACTAAAGGA+AGG | 0.576141 | 3.1:+83771227 | None:intergenic |
| TGAATGATGACCAAATTCAC+TGG | 0.577066 | 3.1:-83770303 | MS.gene42664:CDS |
| CCACAAATGTGTAATGTTGT+GGG | 0.579438 | 3.1:-83771431 | MS.gene42664:CDS |
| GTGAGGATTACTTGTGGTGG+TGG | 0.581791 | 3.1:-83769436 | MS.gene42664:CDS |
| AATCTTGGGGAAGTTCTTCG+TGG | 0.582702 | 3.1:-83771749 | MS.gene42664:CDS |
| AGTACCTTAAAGAAATCTTG+TGG | 0.582843 | 3.1:+83772539 | None:intergenic |
| CTTGTGGAGCGACGCCGGGA+AGG | 0.583502 | 3.1:+83772555 | None:intergenic |
| AGAGACAATTGCAGGGAACA+AGG | 0.584334 | 3.1:+83769868 | None:intergenic |
| CGTTATACTTTGCAATGTCA+CGG | 0.586779 | 3.1:+83770203 | None:intergenic |
| AGGATTACTTGTGGTGGTGG+CGG | 0.591655 | 3.1:-83769433 | MS.gene42664:CDS |
| ACAACTGTGTGCTTAGCATG+AGG | 0.593523 | 3.1:+83770761 | None:intergenic |
| GAACAAGGTTGCAGTCCTGA+GGG | 0.599617 | 3.1:+83769883 | None:intergenic |
| CAACTGTGTGCTTAGCATGA+GGG | 0.605991 | 3.1:+83770762 | None:intergenic |
| AGTGTTAAACACGAGTATGA+TGG | 0.607329 | 3.1:-83770824 | MS.gene42664:CDS |
| TGTGAAGTGGGCTTCAAGAT+GGG | 0.611136 | 3.1:-83770341 | MS.gene42664:CDS |
| AGTGGAAAAGAATTGCCCTC+AGG | 0.612537 | 3.1:-83769898 | MS.gene42664:CDS |
| GAAAACCCAAACCAAGAGCA+TGG | 0.614652 | 3.1:+83769979 | None:intergenic |
| TCATTGCCACCATGCCCGAA+AGG | 0.619231 | 3.1:+83770245 | None:intergenic |
| TTTCAGCACAAGTGACAACA+AGG | 0.619677 | 3.1:+83769492 | None:intergenic |
| TGCAGGAGAGTGATGTGAAG+TGG | 0.630793 | 3.1:-83770354 | MS.gene42664:intron |
| CTACTTCCAGTTGTGCAGTG+AGG | 0.631692 | 3.1:-83769453 | MS.gene42664:CDS |
| ATGGAAACCAAGCTGATAGA+CGG | 0.633306 | 3.1:+83771183 | None:intergenic |
| TGAAAACAAACAAAATCCCA+AGG | 0.637171 | 3.1:-83769679 | MS.gene42664:CDS |
| TTCCTCTCTCCTTCAAACCG+GGG | 0.639857 | 3.1:-83770016 | MS.gene42664:CDS |
| GCAGGAGAGTGATGTGAAGT+GGG | 0.642804 | 3.1:-83770353 | MS.gene42664:intron |
| TTGAAGGAGAGAGGAACCCA+AGG | 0.649137 | 3.1:+83770023 | None:intergenic |
| GGATAGTGCAGAAAATCTTG+GGG | 0.654034 | 3.1:-83771762 | MS.gene42664:CDS |
| TCTCTTCCTTTCGGGCATGG+TGG | 0.655153 | 3.1:-83770251 | MS.gene42664:CDS |
| GCAGTGAGGATTACTTGTGG+TGG | 0.656188 | 3.1:-83769439 | MS.gene42664:CDS |
| AAATGACAGAGACAATTGCA+GGG | 0.656961 | 3.1:+83769861 | None:intergenic |
| GGGGCCTAAATACATCCCCA+TGG | 0.661749 | 3.1:+83770131 | None:intergenic |
| CACCCCGGTTTGAAGGAGAG+AGG | 0.665310 | 3.1:+83770014 | None:intergenic |
| TGGCTGTCATGAGCCCACCC+CGG | 0.665939 | 3.1:+83769999 | None:intergenic |
| CAGCAAATCTGAGTTGTTAG+GGG | 0.667045 | 3.1:+83770111 | None:intergenic |
| ACTGCCCTTTGAGTCCAACA+TGG | 0.674258 | 3.1:+83771164 | None:intergenic |
| AGCAAATCTGAGTTGTTAGG+GGG | 0.675452 | 3.1:+83770112 | None:intergenic |
| AAATGTTCAAAGGATCAGAG+TGG | 0.690463 | 3.1:-83769916 | MS.gene42664:CDS |
| TGTGCAGTGAGGATTACTTG+TGG | 0.692738 | 3.1:-83769442 | MS.gene42664:CDS |
| ATAAAGAAAGAGGTATAGTG+CGG | 0.699094 | 3.1:+83769388 | None:intergenic |
| GATTCAACCAGATTGAGGTG+AGG | 0.702133 | 3.1:+83769558 | None:intergenic |
| TGGTTGGAAGCTTGTCCATG+GGG | 0.704860 | 3.1:-83770146 | MS.gene42664:CDS |
| CTGGAAGTAGCAGAGCACAA+TGG | 0.716782 | 3.1:+83769466 | None:intergenic |
| GGGAAGGTAGAAGGAGAAAG+CGG | 0.717499 | 3.1:+83772571 | None:intergenic |
| ACTCAAAGGGCAGTATACCG+GGG | 0.753482 | 3.1:-83771155 | MS.gene42664:intron |
| AACGAATGTACAGAGCAAGG+AGG | 0.788698 | 3.1:-83771060 | MS.gene42664:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAATTTTTTAGTTTCTA+TGG | - | chr3.1:83770336-83770355 | MS.gene42664:CDS | 10.0% |
| !! | ATAAATGTTAAAAAATTGCT+TGG | + | chr3.1:83770315-83770334 | None:intergenic | 15.0% |
| !! | CTTAATGAAATATATAGTTT+AGG | - | chr3.1:83770194-83770213 | MS.gene42664:CDS | 15.0% |
| !!! | AAATGTGTTTTTTTTTTTTG+TGG | - | chr3.1:83769875-83769894 | MS.gene42664:CDS | 15.0% |
| !!! | ATTGATGAACATTTTTATAA+TGG | - | chr3.1:83771321-83771340 | MS.gene42664:intron | 15.0% |
| !! | GTCAATTGTTGAAAATAAAA+TGG | + | chr3.1:83770946-83770965 | None:intergenic | 20.0% |
| !! | GTTATTAACATACATGAATT+AGG | - | chr3.1:83771224-83771243 | MS.gene42664:CDS | 20.0% |
| !! | TAAAATATTTCTTTGTTGCA+GGG | - | chr3.1:83769956-83769975 | MS.gene42664:CDS | 20.0% |
| !! | TACTAATAATCGTTGATATA+CGG | - | chr3.1:83769528-83769547 | MS.gene42664:CDS | 20.0% |
| !! | TATATTAAATGCTCTCATTT+GGG | - | chr3.1:83772006-83772025 | MS.gene42664:intron | 20.0% |
| !! | TTAAAATATTTCTTTGTTGC+AGG | - | chr3.1:83769955-83769974 | MS.gene42664:CDS | 20.0% |
| !! | TTATATTAAATGCTCTCATT+TGG | - | chr3.1:83772005-83772024 | MS.gene42664:intron | 20.0% |
| !!! | TCATCTTTTTGTTTAGTATT+TGG | - | chr3.1:83770966-83770985 | MS.gene42664:CDS | 20.0% |
| !!! | TTTCAAGTTATATCTCATAA+TGG | - | chr3.1:83770559-83770578 | MS.gene42664:intron | 20.0% |
| !!! | TTTTTATCAGTTTCTAAGAA+AGG | - | chr3.1:83770167-83770186 | MS.gene42664:CDS | 20.0% |
| ! | AAGTAAGTAAGGAAACTTAT+TGG | + | chr3.1:83770754-83770773 | None:intergenic | 25.0% |
| ! | AGATTGAATCTTAATTTCAG+TGG | - | chr3.1:83769484-83769503 | MS.gene42664:CDS | 25.0% |
| ! | ATATTAAATGCTCTCATTTG+GGG | - | chr3.1:83772007-83772026 | MS.gene42664:intron | 25.0% |
| ! | CATGTATCCAAAGTAAAATA+TGG | + | chr3.1:83772527-83772546 | None:intergenic | 25.0% |
| ! | CATTGAAAATTCACTATATG+TGG | - | chr3.1:83770120-83770139 | MS.gene42664:CDS | 25.0% |
| ! | GATAGAAGAAAAAGAAAAGT+TGG | + | chr3.1:83771360-83771379 | None:intergenic | 25.0% |
| ! | GTTATTATTTGATTCCGATT+TGG | - | chr3.1:83770358-83770377 | MS.gene42664:intron | 25.0% |
| !! | AATCAGTTTTACTACATCTT+TGG | - | chr3.1:83772301-83772320 | MS.gene42664:intron | 25.0% |
| !! | ATCAGTTTTACTACATCTTT+GGG | - | chr3.1:83772302-83772321 | MS.gene42664:intron | 25.0% |
| !! | CATATAGTGAATTTTCAATG+CGG | + | chr3.1:83770120-83770139 | None:intergenic | 25.0% |
| !! | GTATTTTATCCACAATCATT+TGG | - | chr3.1:83770807-83770826 | MS.gene42664:CDS | 25.0% |
| !!! | TCTTTTTGTTTAGTATTTGG+TGG | - | chr3.1:83770969-83770988 | MS.gene42664:CDS | 25.0% |
| AAATACAGATCGAGAAGAAA+TGG | + | chr3.1:83769334-83769353 | None:intergenic | 30.0% | |
| AATGATTGTTCTCTTCCTTT+CGG | - | chr3.1:83771580-83771599 | MS.gene42664:intron | 30.0% | |
| AATGTTCATCAATGCAAAAG+AGG | + | chr3.1:83771314-83771333 | None:intergenic | 30.0% | |
| ACTGAAATATACCACCAAAT+CGG | + | chr3.1:83770375-83770394 | None:intergenic | 30.0% | |
| AGAAAACTCGCAGAAAATAA+CGG | + | chr3.1:83770517-83770536 | None:intergenic | 30.0% | |
| AGAATGTTGCATAAAGAAAG+AGG | + | chr3.1:83772465-83772484 | None:intergenic | 30.0% | |
| AGTACCTTAAAGAAATCTTG+TGG | + | chr3.1:83769304-83769323 | None:intergenic | 30.0% | |
| ATGTTCATCAATGCAAAAGA+GGG | + | chr3.1:83771313-83771332 | None:intergenic | 30.0% | |
| CACAAAAATAATGACCTGAA+TGG | + | chr3.1:83770901-83770920 | None:intergenic | 30.0% | |
| CTTTAGTTGTTCCCATAAAA+CGG | - | chr3.1:83770618-83770637 | MS.gene42664:intron | 30.0% | |
| GATAGCTGCATTACATTTAA+AGG | + | chr3.1:83769823-83769842 | None:intergenic | 30.0% | |
| GGAAGTGAATAAAATGAGTA+CGG | + | chr3.1:83770034-83770053 | None:intergenic | 30.0% | |
| GTATTGAATAACAATAGCCA+TGG | + | chr3.1:83770732-83770751 | None:intergenic | 30.0% | |
| GTCATCATTCATTAGCAAAT+AGG | + | chr3.1:83771528-83771547 | None:intergenic | 30.0% | |
| TAATAATCGTTGATATACGG+AGG | - | chr3.1:83769531-83769550 | MS.gene42664:CDS | 30.0% | |
| TCGTTCAGATAAAGTAAGTA+AGG | + | chr3.1:83770765-83770784 | None:intergenic | 30.0% | |
| TGAAAACAAACAAAATCCCA+AGG | - | chr3.1:83772161-83772180 | MS.gene42664:intron | 30.0% | |
| TTCACCATAACAAAAAAGAG+AGG | + | chr3.1:83771413-83771432 | None:intergenic | 30.0% | |
| ! | ATAAAGAAAGAGGTATAGTG+CGG | + | chr3.1:83772455-83772474 | None:intergenic | 30.0% |
| ! | TTCTTTTTCTTCTATCCAAC+TGG | - | chr3.1:83771364-83771383 | MS.gene42664:CDS | 30.0% |
| ! | TTTGAACTCCTTAGCATTTT+TGG | + | chr3.1:83770452-83770471 | None:intergenic | 30.0% |
| !! | AATAACCATTCTAAAGCACA+GGG | + | chr3.1:83771210-83771229 | None:intergenic | 30.0% |
| !! | ATTATTTGATTCCGATTTGG+TGG | - | chr3.1:83770361-83770380 | MS.gene42664:intron | 30.0% |
| !! | TAATAACCATTCTAAAGCAC+AGG | + | chr3.1:83771211-83771230 | None:intergenic | 30.0% |
| !!! | GAACAGGTGTTCAATTTTTT+GGG | - | chr3.1:83771765-83771784 | MS.gene42664:CDS | 30.0% |
| !!! | TCATCCTCTCTTTTTTGTTA+TGG | - | chr3.1:83771406-83771425 | MS.gene42664:CDS | 30.0% |
| AAAATGACAGAGACAATTGC+AGG | + | chr3.1:83771983-83772002 | None:intergenic | 35.0% | |
| AAATGACAGAGACAATTGCA+GGG | + | chr3.1:83771982-83772001 | None:intergenic | 35.0% | |
| AAATGTTCAAAGGATCAGAG+TGG | - | chr3.1:83771924-83771943 | MS.gene42664:intron | 35.0% | |
| AACACGAGTATGATGGTAAA+TGG | - | chr3.1:83771023-83771042 | MS.gene42664:CDS | 35.0% | |
| AATAAAATGAGTACGGAAGC+TGG | + | chr3.1:83770027-83770046 | None:intergenic | 35.0% | |
| AATGAAGAAGACAATCCAGT+TGG | + | chr3.1:83771382-83771401 | None:intergenic | 35.0% | |
| AATGTGGTTATCCAATTCAG+AGG | + | chr3.1:83770229-83770248 | None:intergenic | 35.0% | |
| ACAAAACAATATGCATACCC+CGG | + | chr3.1:83770705-83770724 | None:intergenic | 35.0% | |
| ACACGAGTATGATGGTAAAT+GGG | - | chr3.1:83771024-83771043 | MS.gene42664:CDS | 35.0% | |
| ACAGCAAATCTGAGTTGTTA+GGG | + | chr3.1:83771733-83771752 | None:intergenic | 35.0% | |
| ACGAATCAGATAATCTTCGA+TGG | - | chr3.1:83769721-83769740 | MS.gene42664:CDS | 35.0% | |
| ACTTGATGCCAAAAATGCTA+AGG | - | chr3.1:83770441-83770460 | MS.gene42664:intron | 35.0% | |
| AGAAGATCAATGACGAGTAT+CGG | - | chr3.1:83770473-83770492 | MS.gene42664:intron | 35.0% | |
| AGAGCAAACATTGTACCAAA+TGG | + | chr3.1:83772055-83772074 | None:intergenic | 35.0% | |
| AGGATAGTGCAGAAAATCTT+GGG | - | chr3.1:83770077-83770096 | MS.gene42664:CDS | 35.0% | |
| AGTGTTAAACACGAGTATGA+TGG | - | chr3.1:83771016-83771035 | MS.gene42664:CDS | 35.0% | |
| ATAAAATGAGTACGGAAGCT+GGG | + | chr3.1:83770026-83770045 | None:intergenic | 35.0% | |
| ATGATTGTTCTCTTCCTTTC+GGG | - | chr3.1:83771581-83771600 | MS.gene42664:intron | 35.0% | |
| ATTTGGTACAATGTTTGCTC+TGG | - | chr3.1:83772054-83772073 | MS.gene42664:intron | 35.0% | |
| CAATAGAGAACCAGTGAATT+TGG | + | chr3.1:83771550-83771569 | None:intergenic | 35.0% | |
| CACATCTCTATGATACTTGA+CGG | + | chr3.1:83770839-83770858 | None:intergenic | 35.0% | |
| CCACAAATGTGTAATGTTGT+GGG | - | chr3.1:83770409-83770428 | MS.gene42664:intron | 35.0% | |
| CGCTTGTACAAAATGTTCAA+AGG | - | chr3.1:83771914-83771933 | MS.gene42664:intron | 35.0% | |
| CGTTATACTTTGCAATGTCA+CGG | + | chr3.1:83771640-83771659 | None:intergenic | 35.0% | |
| GTGTAGTTAGGAATAGATGT+TGG | - | chr3.1:83769685-83769704 | MS.gene42664:CDS | 35.0% | |
| TAAGTTCCACATGTGTAGTT+AGG | - | chr3.1:83769673-83769692 | MS.gene42664:CDS | 35.0% | |
| TCAATGAAAACAGCTCCAAA+TGG | + | chr3.1:83772250-83772269 | None:intergenic | 35.0% | |
| TCTATTCCTAACTACACATG+TGG | + | chr3.1:83769682-83769701 | None:intergenic | 35.0% | |
| TGAATGATGACCAAATTCAC+TGG | - | chr3.1:83771537-83771556 | MS.gene42664:intron | 35.0% | |
| TGCATAGAATCCAATAGTAC+CGG | + | chr3.1:83772581-83772600 | None:intergenic | 35.0% | |
| TTATGGGAACAACTAAAGGA+AGG | + | chr3.1:83770616-83770635 | None:intergenic | 35.0% | |
| TTGTGGTCATAAACTTGATC+TGG | - | chr3.1:83769892-83769911 | MS.gene42664:CDS | 35.0% | |
| TTTAGCCAACTTTGATTGCA+CGG | - | chr3.1:83769613-83769632 | MS.gene42664:CDS | 35.0% | |
| ! | AAACTGATTCAACCAGATTG+AGG | + | chr3.1:83772290-83772309 | None:intergenic | 35.0% |
| ! | ACTATCCTGTATCTTTTTGG+GGG | + | chr3.1:83770065-83770084 | None:intergenic | 35.0% |
| ! | ATCCTGATCATTCCGTTTTA+TGG | + | chr3.1:83770633-83770652 | None:intergenic | 35.0% |
| ! | CACTATCCTGTATCTTTTTG+GGG | + | chr3.1:83770066-83770085 | None:intergenic | 35.0% |
| ! | CGTTTTATGGGAACAACTAA+AGG | + | chr3.1:83770620-83770639 | None:intergenic | 35.0% |
| ! | GCACTATCCTGTATCTTTTT+GGG | + | chr3.1:83770067-83770086 | None:intergenic | 35.0% |
| ! | GTGTCAGCCATATTTTACTT+TGG | - | chr3.1:83772517-83772536 | MS.gene42664:intron | 35.0% |
| ! | GTTTTCATGGGAATATTTGC+TGG | - | chr3.1:83771878-83771897 | MS.gene42664:intron | 35.0% |
| ! | GTTTTTGTGGGTAGCTATAT+TGG | - | chr3.1:83772109-83772128 | MS.gene42664:intron | 35.0% |
| ! | TCCTGATCATTCCGTTTTAT+GGG | + | chr3.1:83770632-83770651 | None:intergenic | 35.0% |
| ! | TCTAGAATCCTGCAAATGAT+AGG | + | chr3.1:83770590-83770609 | None:intergenic | 35.0% |
| ! | TGCACTATCCTGTATCTTTT+TGG | + | chr3.1:83770068-83770087 | None:intergenic | 35.0% |
| ! | TTGGATTCTATGCATGCTTT+TGG | - | chr3.1:83772587-83772606 | MS.gene42664:CDS | 35.0% |
| !! | ACCATGATATTTGCTATCCT+TGG | - | chr3.1:83771800-83771819 | MS.gene42664:CDS | 35.0% |
| !! | CACATATGATGTTGATTTCC+AGG | - | chr3.1:83771150-83771169 | MS.gene42664:intron | 35.0% |
| !! | CATATTGTTTTGTAGCACCA+TGG | - | chr3.1:83770712-83770731 | MS.gene42664:CDS | 35.0% |
| !! | CCATGATATTTGCTATCCTT+GGG | - | chr3.1:83771801-83771820 | MS.gene42664:CDS | 35.0% |
| !! | CTCTGGTCTTTTTATGGTTT+GGG | - | chr3.1:83772071-83772090 | MS.gene42664:intron | 35.0% |
| !! | GATTTGCTGTGTGTTTATGT+TGG | - | chr3.1:83771743-83771762 | MS.gene42664:CDS | 35.0% |
| !! | GGGATTTTGTTTGTTTTCAC+AGG | + | chr3.1:83772160-83772179 | None:intergenic | 35.0% |
| !! | TGTTTGCTCTGGTCTTTTTA+TGG | - | chr3.1:83772065-83772084 | MS.gene42664:intron | 35.0% |
| !! | TTATTATCCGCTTTTGCCTT+TGG | - | chr3.1:83771455-83771474 | MS.gene42664:intron | 35.0% |
| !!! | AGCTTCTTATGCGTTTTTTG+TGG | - | chr3.1:83772552-83772571 | MS.gene42664:CDS | 35.0% |
| !!! | GGAACAGGTGTTCAATTTTT+TGG | - | chr3.1:83771764-83771783 | MS.gene42664:CDS | 35.0% |
| !!! | TATGCGTTTTTTGTGGTTAC+CGG | - | chr3.1:83772559-83772578 | MS.gene42664:CDS | 35.0% |
| !!! | TCAGTTCCACTTGTTTTTGT+GGG | - | chr3.1:83772097-83772116 | MS.gene42664:intron | 35.0% |
| AACCACATTTGCAGAGTTGA+TGG | - | chr3.1:83770240-83770259 | MS.gene42664:CDS | 40.0% | |
| AACTGAATCTGCTAGAATCG+TGG | - | chr3.1:83770861-83770880 | MS.gene42664:intron | 40.0% | |
| AATGTAATGCAGCTATCTGC+TGG | - | chr3.1:83769826-83769845 | MS.gene42664:CDS | 40.0% | |
| ACAAACCGTGCAATCAAAGT+TGG | + | chr3.1:83769621-83769640 | None:intergenic | 40.0% | |
| ACTGAATCTGCTAGAATCGT+GGG | - | chr3.1:83770862-83770881 | MS.gene42664:intron | 40.0% | |
| AGCAAATCTGAGTTGTTAGG+GGG | + | chr3.1:83771731-83771750 | None:intergenic | 40.0% | |
| ATGGAAACCAAGCTGATAGA+CGG | + | chr3.1:83770660-83770679 | None:intergenic | 40.0% | |
| ATTGGGGGAATACTTCCATT+TGG | - | chr3.1:83772232-83772251 | MS.gene42664:intron | 40.0% | |
| ATTGGTGTGAGGGTTGAAAT+TGG | - | chr3.1:83771257-83771276 | MS.gene42664:intron | 40.0% | |
| CAAGCTTGAAATCACAAAGC+TGG | - | chr3.1:83772495-83772514 | MS.gene42664:intron | 40.0% | |
| CAATCAAAACAGAGAAGGCT+GGG | + | chr3.1:83772216-83772235 | None:intergenic | 40.0% | |
| CACAGCAAATCTGAGTTGTT+AGG | + | chr3.1:83771734-83771753 | None:intergenic | 40.0% | |
| CAGCAAATCTGAGTTGTTAG+GGG | + | chr3.1:83771732-83771751 | None:intergenic | 40.0% | |
| CAGGATAGTGCAGAAAATCT+TGG | - | chr3.1:83770076-83770095 | MS.gene42664:CDS | 40.0% | |
| CCCAAGGATAGCAAATATCA+TGG | + | chr3.1:83771804-83771823 | None:intergenic | 40.0% | |
| CCCACAACATTACACATTTG+TGG | + | chr3.1:83770412-83770431 | None:intergenic | 40.0% | |
| CGCTCCACAAGATTTCTTTA+AGG | - | chr3.1:83769297-83769316 | MS.gene42664:CDS | 40.0% | |
| CGGTAAATGCCAAATGATTG+TGG | + | chr3.1:83770819-83770838 | None:intergenic | 40.0% | |
| CTGTGTGTTTATGTTGGAAC+AGG | - | chr3.1:83771749-83771768 | MS.gene42664:CDS | 40.0% | |
| GAAGATCAATGACGAGTATC+GGG | - | chr3.1:83770474-83770493 | MS.gene42664:intron | 40.0% | |
| GCCACAAATGTGTAATGTTG+TGG | - | chr3.1:83770408-83770427 | MS.gene42664:intron | 40.0% | |
| GGAACAGTTAACCTCTGAAT+TGG | - | chr3.1:83770215-83770234 | MS.gene42664:CDS | 40.0% | |
| GGATAGTGCAGAAAATCTTG+GGG | - | chr3.1:83770078-83770097 | MS.gene42664:CDS | 40.0% | |
| GGATGATGAAGACCAAAAAG+AGG | + | chr3.1:83772330-83772349 | None:intergenic | 40.0% | |
| GTTTCCATGTTGGACTCAAA+GGG | - | chr3.1:83770672-83770691 | MS.gene42664:intron | 40.0% | |
| TAGCTACCCACAAAAACAAG+TGG | + | chr3.1:83772106-83772125 | None:intergenic | 40.0% | |
| TATCAGCTTGGTTTCCATGT+TGG | - | chr3.1:83770662-83770681 | MS.gene42664:intron | 40.0% | |
| TCAAGAAGTTGAAGAGAGCA+AGG | - | chr3.1:83771117-83771136 | MS.gene42664:intron | 40.0% | |
| TCCCATAAAACGGAATGATC+AGG | - | chr3.1:83770628-83770647 | MS.gene42664:intron | 40.0% | |
| TCTTTATCCTCACCTCAATC+TGG | - | chr3.1:83772275-83772294 | MS.gene42664:intron | 40.0% | |
| TGGGTAATCGCTCATTAACT+TGG | - | chr3.1:83770260-83770279 | MS.gene42664:CDS | 40.0% | |
| TTCACAGGATTCTCAATTGC+AGG | + | chr3.1:83772145-83772164 | None:intergenic | 40.0% | |
| TTGATATACGGAGGATTGTG+AGG | - | chr3.1:83769540-83769559 | MS.gene42664:CDS | 40.0% | |
| TTGCTCTCTTCAACTTCTTG+AGG | + | chr3.1:83771118-83771137 | None:intergenic | 40.0% | |
| TTGTCCATGGGGATGTATTT+AGG | - | chr3.1:83771705-83771724 | MS.gene42664:intron | 40.0% | |
| TTTCAGCACAAGTGACAACA+AGG | + | chr3.1:83772351-83772370 | None:intergenic | 40.0% | |
| TTTGTGGTTACCGGTACTAT+TGG | - | chr3.1:83772568-83772587 | MS.gene42664:CDS | 40.0% | |
| ! | ACCACATTTGCAGAGTTGAT+GGG | - | chr3.1:83770241-83770260 | MS.gene42664:CDS | 40.0% |
| ! | ATTTGGGGCCAAAAATCATC+TGG | - | chr3.1:83772022-83772041 | MS.gene42664:intron | 40.0% |
| ! | CAGCTTTGTGATTTCAAGCT+TGG | + | chr3.1:83772497-83772516 | None:intergenic | 40.0% |
| ! | CATACATGAATTAGGCACTG+AGG | - | chr3.1:83771232-83771251 | MS.gene42664:CDS | 40.0% |
| ! | GTTGAAATTGGTCTGTCGTT+TGG | - | chr3.1:83771269-83771288 | MS.gene42664:intron | 40.0% |
| !! | CATCTTTGGGTTCCTCTTTT+TGG | - | chr3.1:83772315-83772334 | MS.gene42664:intron | 40.0% |
| !! | CTATACCCTGTGCTTTAGAA+TGG | - | chr3.1:83771202-83771221 | MS.gene42664:CDS | 40.0% |
| !! | GAATTAGGCACTGAGGTAAT+TGG | - | chr3.1:83771239-83771258 | MS.gene42664:CDS | 40.0% |
| !! | GCTCTGGTCTTTTTATGGTT+TGG | - | chr3.1:83772070-83772089 | MS.gene42664:intron | 40.0% |
| !! | TGGTTTTGCCTATCATTTGC+AGG | - | chr3.1:83770579-83770598 | MS.gene42664:intron | 40.0% |
| !!! | AGCCTTCTCTGTTTTGATTG+GGG | - | chr3.1:83772216-83772235 | MS.gene42664:intron | 40.0% |
| !!! | ATGCATGCTTTTGGTTCACA+AGG | - | chr3.1:83772596-83772615 | MS.gene42664:CDS | 40.0% |
| !!! | CAGCCTTCTCTGTTTTGATT+GGG | - | chr3.1:83772215-83772234 | MS.gene42664:intron | 40.0% |
| !!! | CTCAGTTCCACTTGTTTTTG+TGG | - | chr3.1:83772096-83772115 | MS.gene42664:intron | 40.0% |
| !!! | CTCTTGGTTTGGGTTTTCAT+GGG | - | chr3.1:83771866-83771885 | MS.gene42664:CDS | 40.0% |
| AACGAATGTACAGAGCAAGG+AGG | - | chr3.1:83770780-83770799 | MS.gene42664:CDS | 45.0% | |
| AATCTTGGGGAAGTTCTTCG+TGG | - | chr3.1:83770091-83770110 | MS.gene42664:CDS | 45.0% | |
| ACAACTGTGTGCTTAGCATG+AGG | + | chr3.1:83771082-83771101 | None:intergenic | 45.0% | |
| ACCCATCAACTCTGCAAATG+TGG | + | chr3.1:83770245-83770264 | None:intergenic | 45.0% | |
| AGAGACAATTGCAGGGAACA+AGG | + | chr3.1:83771975-83771994 | None:intergenic | 45.0% | |
| AGGGTCACATGTTGTCAAAC+GGG | + | chr3.1:83771062-83771081 | None:intergenic | 45.0% | |
| AGTAATCCTCACTGCACAAC+TGG | + | chr3.1:83772396-83772415 | None:intergenic | 45.0% | |
| AGTGGAAAAGAATTGCCCTC+AGG | - | chr3.1:83771942-83771961 | MS.gene42664:intron | 45.0% | |
| ATAGCAGCCAAAGGCAAAAG+CGG | + | chr3.1:83771465-83771484 | None:intergenic | 45.0% | |
| CAACTGTGTGCTTAGCATGA+GGG | + | chr3.1:83771081-83771100 | None:intergenic | 45.0% | |
| CACTGAGGTAATTGGTGTGA+GGG | - | chr3.1:83771247-83771266 | MS.gene42664:intron | 45.0% | |
| CCAATCAAAACAGAGAAGGC+TGG | + | chr3.1:83772217-83772236 | None:intergenic | 45.0% | |
| CTGAACGAATGTACAGAGCA+AGG | - | chr3.1:83770777-83770796 | MS.gene42664:CDS | 45.0% | |
| CTTCCAACCAGTCTCTTCTT+GGG | + | chr3.1:83771684-83771703 | None:intergenic | 45.0% | |
| GAAAACCCAAACCAAGAGCA+TGG | + | chr3.1:83771864-83771883 | None:intergenic | 45.0% | |
| GAGGGTCACATGTTGTCAAA+CGG | + | chr3.1:83771063-83771082 | None:intergenic | 45.0% | |
| GATTCAACCAGATTGAGGTG+AGG | + | chr3.1:83772285-83772304 | None:intergenic | 45.0% | |
| GATTCTACCGTCTATCAGCT+TGG | - | chr3.1:83770650-83770669 | MS.gene42664:intron | 45.0% | |
| GGTTTCCATGTTGGACTCAA+AGG | - | chr3.1:83770671-83770690 | MS.gene42664:intron | 45.0% | |
| TATCAGCTCATAAGCTCACC+TGG | + | chr3.1:83771171-83771190 | None:intergenic | 45.0% | |
| TCCCCCAATCAAAACAGAGA+AGG | + | chr3.1:83772221-83772240 | None:intergenic | 45.0% | |
| TGTGCAGTGAGGATTACTTG+TGG | - | chr3.1:83772398-83772417 | MS.gene42664:intron | 45.0% | |
| ! | ATGTGAAGTGGGCTTCAAGA+TGG | - | chr3.1:83771498-83771517 | MS.gene42664:intron | 45.0% |
| ! | GAAATTGGTCTGTCGTTTGG+CGG | - | chr3.1:83771272-83771291 | MS.gene42664:intron | 45.0% |
| ! | GCACAGCTCCAGATGATTTT+TGG | + | chr3.1:83772033-83772052 | None:intergenic | 45.0% |
| ! | TGTGAAGTGGGCTTCAAGAT+GGG | - | chr3.1:83771499-83771518 | MS.gene42664:intron | 45.0% |
| !! | ATCTTTTTGGGGGCAGGATA+AGG | + | chr3.1:83770055-83770074 | None:intergenic | 45.0% |
| !! | GCTTTGAGGTTAAGCCATTC+AGG | - | chr3.1:83770884-83770903 | MS.gene42664:intron | 45.0% |
| !!! | CCAGCCTTCTCTGTTTTGAT+TGG | - | chr3.1:83772214-83772233 | MS.gene42664:intron | 45.0% |
| !!! | GCCTTCTCTGTTTTGATTGG+GGG | - | chr3.1:83772217-83772236 | MS.gene42664:intron | 45.0% |
| !!! | GCTCTTGGTTTGGGTTTTCA+TGG | - | chr3.1:83771865-83771884 | MS.gene42664:CDS | 45.0% |
| AAGCCCAAGAAGAGACTGGT+TGG | - | chr3.1:83771678-83771697 | MS.gene42664:intron | 50.0% | |
| ACTCAAAGGGCAGTATACCG+GGG | - | chr3.1:83770685-83770704 | MS.gene42664:intron | 50.0% | |
| ACTGCCCTTTGAGTCCAACA+TGG | + | chr3.1:83770679-83770698 | None:intergenic | 50.0% | |
| ACTGGTTGGAAGCTTGTCCA+TGG | - | chr3.1:83771692-83771711 | MS.gene42664:intron | 50.0% | |
| AGAAGGAGAAAGCGGTGTGA+AGG | + | chr3.1:83769264-83769283 | None:intergenic | 50.0% | |
| CTACTTCCAGTTGTGCAGTG+AGG | - | chr3.1:83772387-83772406 | MS.gene42664:intron | 50.0% | |
| CTCTTCTTGGGCTTCTTCCT+GGG | + | chr3.1:83771672-83771691 | None:intergenic | 50.0% | |
| CTGGAAGTAGCAGAGCACAA+TGG | + | chr3.1:83772377-83772396 | None:intergenic | 50.0% | |
| CTGGTTGGAAGCTTGTCCAT+GGG | - | chr3.1:83771693-83771712 | MS.gene42664:intron | 50.0% | |
| GAACAAGGTTGCAGTCCTGA+GGG | + | chr3.1:83771960-83771979 | None:intergenic | 50.0% | |
| GAAGAAGCCCAAGAAGAGAC+TGG | - | chr3.1:83771674-83771693 | MS.gene42664:intron | 50.0% | |
| GACAGCCATGCTCTTGGTTT+GGG | - | chr3.1:83771856-83771875 | MS.gene42664:CDS | 50.0% | |
| GACTCAAAGGGCAGTATACC+GGG | - | chr3.1:83770684-83770703 | MS.gene42664:intron | 50.0% | |
| GCACTGAGGTAATTGGTGTG+AGG | - | chr3.1:83771246-83771265 | MS.gene42664:intron | 50.0% | |
| GCAGGAGAGTGATGTGAAGT+GGG | - | chr3.1:83771487-83771506 | MS.gene42664:intron | 50.0% | |
| GCAGTGAGGATTACTTGTGG+TGG | - | chr3.1:83772401-83772420 | MS.gene42664:intron | 50.0% | |
| GCTTCCAACCAGTCTCTTCT+TGG | + | chr3.1:83771685-83771704 | None:intergenic | 50.0% | |
| GCTTTCTCCTTCTACCTTCC+CGG | - | chr3.1:83769271-83769290 | MS.gene42664:CDS | 50.0% | |
| GGACTCAAAGGGCAGTATAC+CGG | - | chr3.1:83770683-83770702 | MS.gene42664:intron | 50.0% | |
| GGGAAGGTAGAAGGAGAAAG+CGG | + | chr3.1:83769272-83769291 | None:intergenic | 50.0% | |
| GGTTCCTCTCTCCTTCAAAC+CGG | - | chr3.1:83771822-83771841 | MS.gene42664:CDS | 50.0% | |
| GTATAACGAGCTTGAGACCC+AGG | - | chr3.1:83771652-83771671 | MS.gene42664:intron | 50.0% | |
| GTGAGGATTACTTGTGGTGG+TGG | - | chr3.1:83772404-83772423 | MS.gene42664:intron | 50.0% | |
| GTGCGGAAGAACCAGAAGTA+AGG | + | chr3.1:83772438-83772457 | None:intergenic | 50.0% | |
| GTTCCTCTCTCCTTCAAACC+GGG | - | chr3.1:83771823-83771842 | MS.gene42664:CDS | 50.0% | |
| TCCTGCCCCCAAAAAGATAC+AGG | - | chr3.1:83770057-83770076 | MS.gene42664:CDS | 50.0% | |
| TCTCTTCTTGGGCTTCTTCC+TGG | + | chr3.1:83771673-83771692 | None:intergenic | 50.0% | |
| TGACAGCCATGCTCTTGGTT+TGG | - | chr3.1:83771855-83771874 | MS.gene42664:CDS | 50.0% | |
| TGCAGGAGAGTGATGTGAAG+TGG | - | chr3.1:83771486-83771505 | MS.gene42664:intron | 50.0% | |
| TGCTAGAATCGTGGGCTTTG+AGG | - | chr3.1:83770870-83770889 | MS.gene42664:intron | 50.0% | |
| TGGCGGTCATACCTTACTTC+TGG | - | chr3.1:83772424-83772443 | MS.gene42664:intron | 50.0% | |
| TGGTTGGAAGCTTGTCCATG+GGG | - | chr3.1:83771694-83771713 | MS.gene42664:intron | 50.0% | |
| TGTTCTCTTCCTTTCGGGCA+TGG | - | chr3.1:83771586-83771605 | MS.gene42664:intron | 50.0% | |
| TTCCTCTCTCCTTCAAACCG+GGG | - | chr3.1:83771824-83771843 | MS.gene42664:CDS | 50.0% | |
| TTGAAGGAGAGAGGAACCCA+AGG | + | chr3.1:83771820-83771839 | None:intergenic | 50.0% | |
| ! | TCATCTGGAGCTGTGCCATT+TGG | - | chr3.1:83772037-83772056 | MS.gene42664:intron | 50.0% |
| !! | AGGATTACTTGTGGTGGTGG+CGG | - | chr3.1:83772407-83772426 | MS.gene42664:intron | 50.0% |
| !! | TCCTGTATCTTTTTGGGGGC+AGG | + | chr3.1:83770061-83770080 | None:intergenic | 50.0% |
| AAATCTTGTGGAGCGACGCC+GGG | + | chr3.1:83769292-83769311 | None:intergenic | 55.0% | |
| CTCCTGCAGATAGCAGCCAA+AGG | + | chr3.1:83771474-83771493 | None:intergenic | 55.0% | |
| GAAATCTTGTGGAGCGACGC+CGG | + | chr3.1:83769293-83769312 | None:intergenic | 55.0% | |
| GAAGGCTGGGTTCATGTACC+AGG | + | chr3.1:83772203-83772222 | None:intergenic | 55.0% | |
| GCTCATGACAGCCATGCTCT+TGG | - | chr3.1:83771850-83771869 | MS.gene42664:CDS | 55.0% | |
| GGAACAAGGTTGCAGTCCTG+AGG | + | chr3.1:83771961-83771980 | None:intergenic | 55.0% | |
| GGGGCCTAAATACATCCCCA+TGG | + | chr3.1:83771712-83771731 | None:intergenic | 55.0% | |
| TCATGTACCAGGCCTGCTCA+GGG | + | chr3.1:83772192-83772211 | None:intergenic | 55.0% | |
| TCATTGCCACCATGCCCGAA+AGG | + | chr3.1:83771598-83771617 | None:intergenic | 55.0% | |
| TCTCTCCTTCAAACCGGGGT+GGG | - | chr3.1:83771828-83771847 | MS.gene42664:CDS | 55.0% | |
| TCTCTTCCTTTCGGGCATGG+TGG | - | chr3.1:83771589-83771608 | MS.gene42664:intron | 55.0% | |
| TGCCTTTGGCTGCTATCTGC+AGG | - | chr3.1:83771469-83771488 | MS.gene42664:intron | 55.0% | |
| TTCATGTACCAGGCCTGCTC+AGG | + | chr3.1:83772193-83772212 | None:intergenic | 55.0% | |
| CCTGCTCAGGGATCTGCCTT+GGG | + | chr3.1:83772180-83772199 | None:intergenic | 60.0% | |
| CTCTCTCCTTCAAACCGGGG+TGG | - | chr3.1:83771827-83771846 | MS.gene42664:CDS | 60.0% | |
| ! | ATGAGCCCACCCCGGTTTGA+AGG | + | chr3.1:83771836-83771855 | None:intergenic | 60.0% |
| ! | CACCCCGGTTTGAAGGAGAG+AGG | + | chr3.1:83771829-83771848 | None:intergenic | 60.0% |
| AGCGACGCCGGGAAGGTAGA+AGG | + | chr3.1:83769281-83769300 | None:intergenic | 65.0% | |
| CCCAAGGCAGATCCCTGAGC+AGG | - | chr3.1:83772177-83772196 | MS.gene42664:intron | 65.0% | |
| GCCTGCTCAGGGATCTGCCT+TGG | + | chr3.1:83772181-83772200 | None:intergenic | 65.0% | |
| TGGCTGTCATGAGCCCACCC+CGG | + | chr3.1:83771844-83771863 | None:intergenic | 65.0% | |
| CTTGTGGAGCGACGCCGGGA+AGG | + | chr3.1:83769288-83769307 | None:intergenic | 70.0% | |
| GGCAGATCCCTGAGCAGGCC+TGG | - | chr3.1:83772182-83772201 | MS.gene42664:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 83769214 | 83772648 | 83769214 | ID=MS.gene42664 |
| chr3.1 | mRNA | 83769214 | 83772648 | 83769214 | ID=MS.gene42664.t1;Parent=MS.gene42664 |
| chr3.1 | exon | 83772544 | 83772648 | 83772544 | ID=MS.gene42664.t1.exon1;Parent=MS.gene42664.t1 |
| chr3.1 | CDS | 83772544 | 83772648 | 83772544 | ID=cds.MS.gene42664.t1;Parent=MS.gene42664.t1 |
| chr3.1 | exon | 83771721 | 83771885 | 83771721 | ID=MS.gene42664.t1.exon2;Parent=MS.gene42664.t1 |
| chr3.1 | CDS | 83771721 | 83771885 | 83771721 | ID=cds.MS.gene42664.t1;Parent=MS.gene42664.t1 |
| chr3.1 | exon | 83771359 | 83771468 | 83771359 | ID=MS.gene42664.t1.exon3;Parent=MS.gene42664.t1 |
| chr3.1 | CDS | 83771359 | 83771468 | 83771359 | ID=cds.MS.gene42664.t1;Parent=MS.gene42664.t1 |
| chr3.1 | exon | 83771156 | 83771261 | 83771156 | ID=MS.gene42664.t1.exon4;Parent=MS.gene42664.t1 |
| chr3.1 | CDS | 83771156 | 83771261 | 83771156 | ID=cds.MS.gene42664.t1;Parent=MS.gene42664.t1 |
| chr3.1 | exon | 83770957 | 83771069 | 83770957 | ID=MS.gene42664.t1.exon5;Parent=MS.gene42664.t1 |
| chr3.1 | CDS | 83770957 | 83771069 | 83770957 | ID=cds.MS.gene42664.t1;Parent=MS.gene42664.t1 |
| chr3.1 | exon | 83770691 | 83770844 | 83770691 | ID=MS.gene42664.t1.exon6;Parent=MS.gene42664.t1 |
| chr3.1 | CDS | 83770691 | 83770844 | 83770691 | ID=cds.MS.gene42664.t1;Parent=MS.gene42664.t1 |
| chr3.1 | exon | 83769214 | 83770371 | 83769214 | ID=MS.gene42664.t1.exon7;Parent=MS.gene42664.t1 |
| chr3.1 | CDS | 83769214 | 83770371 | 83769214 | ID=cds.MS.gene42664.t1;Parent=MS.gene42664.t1 |
| Gene Sequence |
| Protein sequence |
