AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene037818


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037818.t1 MTR_8g074030 100.000 371 0 0 1 371 1 371 0.0 764
MS.gene037818.t1 MTR_8g074030 98.922 371 0 1 1 371 1 367 0.0 751
MS.gene037818.t1 MTR_5g023740 88.949 371 37 1 1 371 1 367 0.0 676
MS.gene037818.t1 MTR_5g023740 87.871 371 37 2 1 371 1 363 0.0 663
MS.gene037818.t1 MTR_5g023740 89.680 281 25 1 1 281 1 277 0.0 518
MS.gene037818.t1 MTR_5g023740 89.680 281 25 1 1 281 1 277 0.0 518
MS.gene037818.t1 MTR_5g023740 88.256 281 25 2 1 281 1 273 0.0 505
MS.gene037818.t1 MTR_1g064070 51.744 344 156 4 34 370 18 358 1.56e-118 348
MS.gene037818.t1 MTR_3g101470 51.786 336 154 3 40 370 21 353 7.16e-118 346
MS.gene037818.t1 MTR_2g104610 29.333 375 209 18 17 353 18 374 7.02e-27 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037818.t1 AT4G35260 85.095 369 52 1 3 371 2 367 0.0 643
MS.gene037818.t1 AT2G17130 82.927 369 60 1 3 371 2 367 0.0 627
MS.gene037818.t1 AT4G35650 81.250 368 67 1 4 371 3 368 0.0 624
MS.gene037818.t1 AT2G17130 81.843 369 60 2 3 371 2 363 0.0 614
MS.gene037818.t1 AT5G03290 50.595 336 158 2 40 370 42 374 2.01e-116 343
MS.gene037818.t1 AT3G09810 49.107 336 163 2 40 370 42 374 8.77e-111 328
MS.gene037818.t1 AT1G32480 62.946 224 68 5 41 261 2 213 6.07e-93 277
MS.gene037818.t1 AT1G80560 29.076 368 207 15 44 371 45 398 1.14e-29 118
MS.gene037818.t1 AT5G14200 28.986 345 197 14 44 353 49 380 5.93e-29 116
MS.gene037818.t1 AT5G14200 28.986 345 197 14 44 353 49 380 6.35e-29 116
MS.gene037818.t1 AT1G31180 28.406 345 199 14 44 353 46 377 1.58e-27 112
MS.gene037818.t1 AT1G31180 28.406 345 199 14 44 353 61 392 2.79e-27 112
MS.gene037818.t1 AT5G14200 26.891 238 137 9 44 250 49 280 2.95e-11 64.3

Find 111 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAATAAGGTTTGTCTTAA+AGG 0.160532 8.2:-30643308 MS.gene037818:CDS
CGATCCCGTCGCCGGGGATT+AGG 0.172397 8.2:+30643456 None:intergenic
ACGTTGATATTGTAGTTATT+AGG 0.239338 8.2:-30643160 MS.gene037818:CDS
CTAGATTTCCATACAGATTT+GGG 0.243372 8.2:+30640334 None:intergenic
ACTAGATTTCCATACAGATT+TGG 0.273061 8.2:+30640333 None:intergenic
CGTTGATATTGTAGTTATTA+GGG 0.273382 8.2:-30643159 MS.gene037818:CDS
TGAATCGATCCGTAAGAATA+AGG 0.290840 8.2:-30643321 MS.gene037818:CDS
TCACTTGCTTTCTGTTGTTC+AGG 0.298640 8.2:+30641733 None:intergenic
ATTTCGTTGTATTTAATTCC+AGG 0.346017 8.2:+30641630 None:intergenic
GGGATTAGGGTTACGGGACG+GGG 0.348439 8.2:+30643470 None:intergenic
TTACTGCATCGACAACTTCT+TGG 0.351267 8.2:+30638699 None:intergenic
CTTGAACATGAGGTTGTTCC+CGG 0.354977 8.2:-30643110 MS.gene037818:CDS
AATACTGCGGCAGGCATTGC+TGG 0.359026 8.2:-30640306 MS.gene037818:CDS
GATCCCGTCGCCGGGGATTA+GGG 0.361349 8.2:+30643457 None:intergenic
GCTTCATTATATTTGCTTTG+TGG 0.364344 8.2:+30641703 None:intergenic
AGGTGGATTGGTTACTCCTA+TGG 0.365893 8.2:-30643288 MS.gene037818:CDS
GGGGATTAGGGTTACGGGAC+GGG 0.371488 8.2:+30643469 None:intergenic
GGTCAGCAAATGCAGGAAAC+TGG 0.384422 8.2:+30638798 None:intergenic
TCCTGCATTTGCTGACCGTT+TGG 0.391960 8.2:-30638792 MS.gene037818:CDS
CTTTGAGATGGTGAATGGTT+CGG 0.393371 8.2:+30643532 None:intergenic
TCGAATTTCTCAAAGTAAAC+TGG 0.397465 8.2:+30643383 None:intergenic
GCTTGCGGATGGTTTGTTCT+TGG 0.398902 8.2:-30641682 MS.gene037818:CDS
GAATGGTTCGGATTGGGATC+GGG 0.408930 8.2:+30643544 None:intergenic
TACTGCATCGACAACTTCTT+GGG 0.411456 8.2:+30638700 None:intergenic
GGGTTGAGAGGAGGTGTTTG+AGG 0.411998 8.2:+30643564 None:intergenic
TGAGAGGAGGTGTTTGAGGA+GGG 0.412665 8.2:+30643568 None:intergenic
GCAGGCATTGCTGGAGGCAC+TGG 0.419145 8.2:-30640297 MS.gene037818:CDS
GTCGCCGGGGATTAGGGTTA+CGG 0.426544 8.2:+30643463 None:intergenic
TAAGACAAACCTTATTCTTA+CGG 0.426710 8.2:+30643312 None:intergenic
GTATTTAATTCCAGGATACT+TGG 0.429599 8.2:+30641638 None:intergenic
TGAATGGTTCGGATTGGGAT+CGG 0.435193 8.2:+30643543 None:intergenic
GGGATCGGCCCACTCGTAAC+CGG 0.440880 8.2:-30643440 MS.gene037818:CDS
CGGTGTCGTCGAAAGTCTTA+AGG 0.445057 8.2:-30643090 MS.gene037818:intron
GAGGTGTTTGAGGAGGGGTA+TGG 0.448718 8.2:+30643574 None:intergenic
GGATTAGGGTTACGGGACGG+GGG 0.451332 8.2:+30643471 None:intergenic
TTGAGAGGAGGTGTTTGAGG+AGG 0.452501 8.2:+30643567 None:intergenic
ATGGATCTTCTTGTTGCCAT+TGG 0.453390 8.2:+30643593 None:intergenic
CGGCGCCGTTGAGCAACTAA+TGG 0.458955 8.2:-30643420 MS.gene037818:CDS
TTTGAGCAGGGTGCTTCAGC+AGG 0.462492 8.2:-30638908 MS.gene037818:CDS
AGTGGGCCGATCCCGTCGCC+GGG 0.472280 8.2:+30643449 None:intergenic
TCGCCGGGGATTAGGGTTAC+GGG 0.472697 8.2:+30643464 None:intergenic
GATGGTGAATGGTTCGGATT+GGG 0.474079 8.2:+30643538 None:intergenic
GAGTGGGCCGATCCCGTCGC+CGG 0.474941 8.2:+30643448 None:intergenic
TGAGCATGCTGTGTTTGAGC+AGG 0.476481 8.2:-30638921 MS.gene037818:CDS
TTAAGACTTTCGACGACACC+GGG 0.476912 8.2:+30643092 None:intergenic
TCTCATCAGCTATGATGCTT+AGG 0.477441 8.2:-30638826 MS.gene037818:CDS
GAGGTTGCCACCAAGTATCC+TGG 0.478525 8.2:-30641648 MS.gene037818:CDS
CATCGCTTTGAGATGGTGAA+TGG 0.478723 8.2:+30643527 None:intergenic
CTAGTTGCAAATACTGCGGC+AGG 0.479098 8.2:-30640315 MS.gene037818:CDS
AGATGGTGAATGGTTCGGAT+TGG 0.479659 8.2:+30643537 None:intergenic
GGAGGCACTGGAGTCATGCC+AGG 0.483629 8.2:-30640285 MS.gene037818:CDS
AATAAGGTTTGTCTTAAAGG+TGG 0.484570 8.2:-30643305 MS.gene037818:CDS
GGTTTGTCTTAAAGGTGGAT+TGG 0.488656 8.2:-30643300 MS.gene037818:CDS
GATGAGAGAAGAAGCGCCAC+TGG 0.491289 8.2:+30638842 None:intergenic
TAACCCTAATCCCCGGCGAC+GGG 0.492476 8.2:-30643460 MS.gene037818:CDS
CTTAAGACTTTCGACGACAC+CGG 0.493025 8.2:+30643091 None:intergenic
TCCAAACGGTCAGCAAATGC+AGG 0.494673 8.2:+30638791 None:intergenic
CATTAGTTGCTCAACGGCGC+CGG 0.494753 8.2:+30643421 None:intergenic
GATTAGGGTTACGGGACGGG+GGG 0.495755 8.2:+30643472 None:intergenic
TTTGAGAAATTCGACGTACA+TGG 0.504755 8.2:-30643374 MS.gene037818:CDS
GCCCGAGCAGTTTGATGTCA+TGG 0.512416 8.2:-30641571 MS.gene037818:intron
CTAATCCCCGGCGACGGGAT+CGG 0.517163 8.2:-30643455 MS.gene037818:CDS
TACCATGACATCAAACTGCT+CGG 0.517965 8.2:+30641569 None:intergenic
TAAATACAACGAAATTATTG+TGG 0.523864 8.2:-30641622 MS.gene037818:CDS
TTGGTTACTCCTATGGGTGG+TGG 0.528515 8.2:-30643281 MS.gene037818:CDS
GGTGGATTGGTTACTCCTAT+GGG 0.530483 8.2:-30643287 MS.gene037818:CDS
GAGAGGAGGTGTTTGAGGAG+GGG 0.532450 8.2:+30643569 None:intergenic
TAGGTTACCCCAAATCTGTA+TGG 0.533364 8.2:-30640342 MS.gene037818:CDS
CGCTTCCATTAGTTGCTCAA+CGG 0.535249 8.2:+30643415 None:intergenic
TACATGCACCGTCCCGGCGA+CGG 0.545739 8.2:-30643497 MS.gene037818:CDS
AATACTGAAGGGGAGTATGC+TGG 0.554823 8.2:-30643134 MS.gene037818:CDS
CGGGGATTAGGGTTACGGGA+CGG 0.556243 8.2:+30643468 None:intergenic
GGTGCTTCAGCAGGAAATGT+TGG 0.556712 8.2:-30638899 MS.gene037818:CDS
AGCAAATATAATGAAGCTTG+CGG 0.556973 8.2:-30641697 MS.gene037818:CDS
AAGTATCGGACAAAGGATCT+TGG 0.558261 8.2:-30638737 MS.gene037818:CDS
TTTAATTCCAGGATACTTGG+TGG 0.560631 8.2:+30641641 None:intergenic
GTTATTAGGGAGAATACTGA+AGG 0.561297 8.2:-30643146 MS.gene037818:CDS
ACCATGACATCAAACTGCTC+GGG 0.568329 8.2:+30641570 None:intergenic
GTAACCCTAATCCCCGGCGA+CGG 0.570101 8.2:-30643461 MS.gene037818:CDS
GAGCATGCTGTGTTTGAGCA+GGG 0.577817 8.2:-30638920 MS.gene037818:CDS
TCAACGGCGCCGGTTACGAG+TGG 0.578394 8.2:+30643431 None:intergenic
TTATTAGGGAGAATACTGAA+GGG 0.584736 8.2:-30643145 MS.gene037818:CDS
ATTGGGATCGGGTTGAGAGG+AGG 0.584800 8.2:+30643555 None:intergenic
GTAACCTACATGCACCGTCC+CGG 0.585438 8.2:-30643503 MS.gene037818:CDS
GTTCTTGGAATCTTGTCGAG+AGG 0.585888 8.2:-30641667 MS.gene037818:CDS
TGCATCGACAACTTCTTGGG+TGG 0.586969 8.2:+30638703 None:intergenic
AATATAATGAAGCTTGCGGA+TGG 0.592033 8.2:-30641693 MS.gene037818:CDS
GGTTACGCATCGCTTTGAGA+TGG 0.594581 8.2:+30643520 None:intergenic
CGGATTGGGATCGGGTTGAG+AGG 0.596796 8.2:+30643552 None:intergenic
TATCGGACAAAGGATCTTGG+AGG 0.597549 8.2:-30638734 MS.gene037818:CDS
CAACGGCGCCGGTTACGAGT+GGG 0.604840 8.2:+30643432 None:intergenic
TCATTCTAGAGGGCAAGTAT+CGG 0.606553 8.2:-30638751 MS.gene037818:CDS
GTTCGCTTAATGTTCAGTTG+AGG 0.618363 8.2:-30643253 MS.gene037818:CDS
TATTAGGGAGAATACTGAAG+GGG 0.622910 8.2:-30643144 MS.gene037818:CDS
TCAACGTTATCATGTCGAGT+AGG 0.631397 8.2:+30643176 None:intergenic
TAGATTTCCATACAGATTTG+GGG 0.633748 8.2:+30640335 None:intergenic
TCATGTCGAGTAGGTAACCC+AGG 0.633861 8.2:+30643185 None:intergenic
GAACTAACACCACCACCCAT+AGG 0.634743 8.2:+30643272 None:intergenic
GTATGCTGGTCTTGAACATG+AGG 0.635401 8.2:-30643120 MS.gene037818:CDS
GTCGCCGGGACGGTGCATGT+AGG 0.635610 8.2:+30643499 None:intergenic
CGTCCCGTAACCCTAATCCC+CGG 0.639953 8.2:-30643467 MS.gene037818:CDS
ATCGGACAAAGGATCTTGGA+GGG 0.644506 8.2:-30638733 MS.gene037818:CDS
GGATTGGTTACTCCTATGGG+TGG 0.645378 8.2:-30643284 MS.gene037818:CDS
TGACATGAAAGCTGTACCTA+CGG 0.647259 8.2:-30643351 MS.gene037818:CDS
ACTGCGGCAGGCATTGCTGG+AGG 0.647366 8.2:-30640303 MS.gene037818:CDS
AGAGGGCAAGTATCGGACAA+AGG 0.667139 8.2:-30638744 MS.gene037818:CDS
GTGGGCCGATCCCGTCGCCG+GGG 0.685533 8.2:+30643450 None:intergenic
ACAAAAGACAGCTAATCCAG+TGG 0.690265 8.2:-30638858 MS.gene037818:CDS
GGCACTGGAGTCATGCCAGG+AGG 0.693153 8.2:-30640282 MS.gene037818:intron
ATCGATTCAAGAACTTCCGT+AGG 0.726256 8.2:+30643335 None:intergenic
AAATCTAGTTGCAAATACTG+CGG 0.735896 8.2:-30640319 MS.gene037818:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAAAATGACTATAAT+TGG + chr8.2:30639580-30639599 None:intergenic 10.0%
!!! GTCATTTTTATAATAATTTT+AGG - chr8.2:30639586-30639605 MS.gene037818:intron 10.0%
!! CTGTAAAATAAAATTTAAAC+AGG + chr8.2:30642799-30642818 None:intergenic 15.0%
!! TAAAGACATTAATATGAAAT+AGG + chr8.2:30642524-30642543 None:intergenic 15.0%
!!! AAAAAAAAAAGTACTGAATT+TGG + chr8.2:30640255-30640274 None:intergenic 15.0%
!!! TAGTTTATTTCTTAATTTTG+TGG - chr8.2:30639676-30639695 MS.gene037818:intron 15.0%
!!! TGTTTGTATAATTTTTTTTG+AGG - chr8.2:30642733-30642752 MS.gene037818:intron 15.0%
!!! TTGAATTTTTTGAATTGTTT+GGG + chr8.2:30642405-30642424 None:intergenic 15.0%
!! AACATTCTCACAAATTATAT+AGG - chr8.2:30640366-30640385 MS.gene037818:intron 20.0%
!! AGGTTAATGTTTAAAAACTT+TGG + chr8.2:30641653-30641672 None:intergenic 20.0%
!! AGTGAATTTATAAAGTTAAG+TGG + chr8.2:30641604-30641623 None:intergenic 20.0%
!! CAAACAATTCAAAAAATTCA+AGG - chr8.2:30642404-30642423 MS.gene037818:intron 20.0%
!! CATCATAGATTAAAGAAAAA+TGG + chr8.2:30640741-30640760 None:intergenic 20.0%
!! CTGTTAGACTAATTAAATAT+AGG + chr8.2:30642561-30642580 None:intergenic 20.0%
!! TAAATACAACGAAATTATTG+TGG - chr8.2:30640650-30640669 MS.gene037818:intron 20.0%
!! TAGACTAATTAAATATAGGT+TGG + chr8.2:30642557-30642576 None:intergenic 20.0%
!! TATATAAGTATGTCCTAAAA+TGG + chr8.2:30640313-30640332 None:intergenic 20.0%
!! TATGTGAAATATGAATATGA+TGG - chr8.2:30643165-30643184 MS.gene037818:CDS 20.0%
!! TGAAATTTCATAAATGTGTA+GGG - chr8.2:30639651-30639670 MS.gene037818:intron 20.0%
!! TTGAAATTTCATAAATGTGT+AGG - chr8.2:30639650-30639669 MS.gene037818:intron 20.0%
!! TTTAAACAGGTTATCATATT+AGG + chr8.2:30642786-30642805 None:intergenic 20.0%
!!! AATTTTGTGGTTTCTTAAAA+AGG - chr8.2:30639689-30639708 MS.gene037818:intron 20.0%
!!! CATTTTTCTTTAATCTATGA+TGG - chr8.2:30640739-30640758 MS.gene037818:intron 20.0%
!!! CTCAATTTTATAAATGTTTC+TGG + chr8.2:30641177-30641196 None:intergenic 20.0%
!!! CTTGAATTTTTTGAATTGTT+TGG + chr8.2:30642406-30642425 None:intergenic 20.0%
!!! GTAGGATTTTGAATATTTTA+AGG - chr8.2:30639614-30639633 MS.gene037818:intron 20.0%
!!! TAATAATTTTAGGTTTGAGT+AGG - chr8.2:30639596-30639615 MS.gene037818:intron 20.0%
!!! TTAATTGTTTTAATCTTCCT+GGG - chr8.2:30639070-30639089 MS.gene037818:intron 20.0%
! AACATTATGGATTCTCTATT+AGG + chr8.2:30639528-30639547 None:intergenic 25.0%
! AAGAATAAGGTTTGTCTTAA+AGG - chr8.2:30638964-30638983 MS.gene037818:intron 25.0%
! AATAAAATGTCTGATTGTCT+TGG - chr8.2:30643067-30643086 MS.gene037818:intron 25.0%
! AATATGCCAAAAATTTGTGA+AGG - chr8.2:30642830-30642849 MS.gene037818:intron 25.0%
! AATCTAGATAGATATTCCAA+AGG + chr8.2:30640399-30640418 None:intergenic 25.0%
! ACAAACAGTTCATGAAAAAA+CGG + chr8.2:30640878-30640897 None:intergenic 25.0%
! ACGTTGATATTGTAGTTATT+AGG - chr8.2:30639112-30639131 MS.gene037818:intron 25.0%
! ACTCTTTATAAACTCATTTC+AGG + chr8.2:30639450-30639469 None:intergenic 25.0%
! AGTAGTGTATTTAGGTAAAT+AGG + chr8.2:30643023-30643042 None:intergenic 25.0%
! ATAAAATGTCTGATTGTCTT+GGG - chr8.2:30643068-30643087 MS.gene037818:intron 25.0%
! ATTTAAGGGTAGAAATATGT+CGG + chr8.2:30643130-30643149 None:intergenic 25.0%
! ATTTCGTTGTATTTAATTCC+AGG + chr8.2:30640645-30640664 None:intergenic 25.0%
! CAATCAATAACCTAGTTTAT+TGG + chr8.2:30639858-30639877 None:intergenic 25.0%
! CGTTGATATTGTAGTTATTA+GGG - chr8.2:30639113-30639132 MS.gene037818:intron 25.0%
! GAAAATAGATGTATTACAGA+AGG - chr8.2:30639877-30639896 MS.gene037818:intron 25.0%
! GAACTTAAATTAACCTTGAA+TGG - chr8.2:30639984-30640003 MS.gene037818:intron 25.0%
! TAAGACAAACCTTATTCTTA+CGG + chr8.2:30638963-30638982 None:intergenic 25.0%
! TAAGTGTCTAAAGAACATTA+TGG + chr8.2:30639541-30639560 None:intergenic 25.0%
! TAGACTAAACAATTTATACC+AGG + chr8.2:30642493-30642512 None:intergenic 25.0%
! TCATTAACTACATTAACATC+TGG - chr8.2:30642265-30642284 MS.gene037818:intron 25.0%
! TCTAATAGTTCTTAATTTCC+AGG + chr8.2:30641122-30641141 None:intergenic 25.0%
! TGAAAAACCAATAGCAAAAA+AGG + chr8.2:30641031-30641050 None:intergenic 25.0%
! TGATTGAGATTTGAGAATAT+CGG - chr8.2:30639397-30639416 MS.gene037818:intron 25.0%
!! ACAACTTCAATTTAAAACCT+TGG - chr8.2:30640150-30640169 MS.gene037818:intron 25.0%
!! GAATAATGTTCTAAACTTGA+TGG - chr8.2:30642116-30642135 MS.gene037818:intron 25.0%
!! TTATATAGGTTCTTTTCCTT+TGG - chr8.2:30640380-30640399 MS.gene037818:intron 25.0%
!! TTTATACCAGGTTTTCAAAA+AGG + chr8.2:30642481-30642500 None:intergenic 25.0%
!! TTTTAATCCAAATATTACCC+TGG + chr8.2:30640219-30640238 None:intergenic 25.0%
!!! ATTTTTTTTGAGGTCTTTCA+TGG - chr8.2:30642743-30642762 MS.gene037818:intron 25.0%
!!! GTTAATTGTTTTAATCTTCC+TGG - chr8.2:30639069-30639088 MS.gene037818:intron 25.0%
!!! TCTTTGTTTTATATTGATCG+AGG - chr8.2:30639221-30639240 MS.gene037818:intron 25.0%
!!! TTTGACTTGATATTTTTGGT+AGG - chr8.2:30640461-30640480 MS.gene037818:intron 25.0%
AAAGGTTTGTGATTGCAATA+TGG - chr8.2:30639707-30639726 MS.gene037818:intron 30.0%
AAATCTAGTTGCAAATACTG+CGG - chr8.2:30641953-30641972 MS.gene037818:intron 30.0%
AAGGTTTGTGATTGCAATAT+GGG - chr8.2:30639708-30639727 MS.gene037818:intron 30.0%
AATAAGGTTTGTCTTAAAGG+TGG - chr8.2:30638967-30638986 MS.gene037818:intron 30.0%
AATCTTGTAGCCAATAAACT+AGG - chr8.2:30639845-30639864 MS.gene037818:intron 30.0%
AATGGTTACAATTGCATATG+TGG + chr8.2:30640064-30640083 None:intergenic 30.0%
AATTTGTGAAGGTAGTAGTA+TGG - chr8.2:30642841-30642860 MS.gene037818:intron 30.0%
ACTAGATTTCCATACAGATT+TGG + chr8.2:30641942-30641961 None:intergenic 30.0%
AGCAAATATAATGAAGCTTG+CGG - chr8.2:30640575-30640594 MS.gene037818:intron 30.0%
ATAATCAGATCAAAGCTCTA+AGG + chr8.2:30642045-30642064 None:intergenic 30.0%
ATAGAGAGTAGAAAAGATTC+AGG + chr8.2:30641294-30641313 None:intergenic 30.0%
ATCTACACATGAATGAACAA+GGG + chr8.2:30641438-30641457 None:intergenic 30.0%
ATGCCACAACAACAAAATTT+AGG + chr8.2:30642991-30643010 None:intergenic 30.0%
ATTAGTGAAATGTGTGCAAA+TGG - chr8.2:30642378-30642397 MS.gene037818:intron 30.0%
CAATGTTGAATACTTAACCA+AGG + chr8.2:30640170-30640189 None:intergenic 30.0%
CTAACAGACTAATATGCAAT+GGG - chr8.2:30642574-30642593 MS.gene037818:intron 30.0%
CTAACTCATCCTTACAAAAT+GGG + chr8.2:30639491-30639510 None:intergenic 30.0%
CTAGATTTCCATACAGATTT+GGG + chr8.2:30641941-30641960 None:intergenic 30.0%
CTTGGTTAAGTATTCAACAT+TGG - chr8.2:30640168-30640187 MS.gene037818:intron 30.0%
GCATCTGATAATTGTTAACA+TGG - chr8.2:30641220-30641239 MS.gene037818:intron 30.0%
GCTTCATTATATTTGCTTTG+TGG + chr8.2:30640572-30640591 None:intergenic 30.0%
GTACTTTGTGGAATATTGAA+GGG - chr8.2:30641730-30641749 MS.gene037818:CDS 30.0%
GTATTTAATTCCAGGATACT+TGG + chr8.2:30640637-30640656 None:intergenic 30.0%
GTGAAATATGAATATGATGG+TGG - chr8.2:30643168-30643187 MS.gene037818:CDS 30.0%
GTTGAAAAAGTCATTCTAGA+GGG - chr8.2:30643511-30643530 MS.gene037818:CDS 30.0%
TAAACAAGGTTTGAATGTCT+AGG - chr8.2:30641394-30641413 MS.gene037818:intron 30.0%
TAACAATTATCAGATGCTGT+TGG + chr8.2:30641217-30641236 None:intergenic 30.0%
TAACTAAAAACTATACCTCC+TGG + chr8.2:30642008-30642027 None:intergenic 30.0%
TACATCCTAAGATACGTTAA+AGG + chr8.2:30641507-30641526 None:intergenic 30.0%
TAGAGAGTAGAAAAGATTCA+GGG + chr8.2:30641293-30641312 None:intergenic 30.0%
TAGATTTCCATACAGATTTG+GGG + chr8.2:30641940-30641959 None:intergenic 30.0%
TATCTACACATGAATGAACA+AGG + chr8.2:30641439-30641458 None:intergenic 30.0%
TCGAATTTCTCAAAGTAAAC+TGG + chr8.2:30638892-30638911 None:intergenic 30.0%
TCTAACAGACTAATATGCAA+TGG - chr8.2:30642573-30642592 MS.gene037818:intron 30.0%
TCTAACTCATCCTTACAAAA+TGG + chr8.2:30639492-30639511 None:intergenic 30.0%
TGAAAAAACGGAAATGCAAA+TGG + chr8.2:30640866-30640885 None:intergenic 30.0%
TGTACTTTGTGGAATATTGA+AGG - chr8.2:30641729-30641748 MS.gene037818:CDS 30.0%
TGTTGAAAAAGTCATTCTAG+AGG - chr8.2:30643510-30643529 MS.gene037818:CDS 30.0%
TTAGACACTTATGTTTGCAA+GGG - chr8.2:30639550-30639569 MS.gene037818:intron 30.0%
TTAGGATGTAGAAGTTTAGA+GGG - chr8.2:30641517-30641536 MS.gene037818:intron 30.0%
TTATTAGGGAGAATACTGAA+GGG - chr8.2:30639127-30639146 MS.gene037818:intron 30.0%
TTATTATGTAGACAGAGTTG+AGG + chr8.2:30643052-30643071 None:intergenic 30.0%
TTCAACCTTTAACGTATCTT+AGG - chr8.2:30641499-30641518 MS.gene037818:intron 30.0%
TTCTTTGGATGGATAAGTTA+GGG + chr8.2:30641690-30641709 None:intergenic 30.0%
TTTAAGGGTAGAAATATGTC+GGG + chr8.2:30643129-30643148 None:intergenic 30.0%
TTTAGACACTTATGTTTGCA+AGG - chr8.2:30639549-30639568 MS.gene037818:intron 30.0%
! AATTTAAGTTCGAACCTAAG+AGG + chr8.2:30639975-30639994 None:intergenic 30.0%
! ATATTTCTACCCTTAAATGG+AGG - chr8.2:30643132-30643151 MS.gene037818:CDS 30.0%
! ATTTGAAGTTGTTTGTAGTG+TGG - chr8.2:30639332-30639351 MS.gene037818:intron 30.0%
! CATTGGAAACTAAGTTGAAA+TGG - chr8.2:30640185-30640204 MS.gene037818:intron 30.0%
! CCTTTTCAAACAGAAAGAAA+GGG + chr8.2:30641559-30641578 None:intergenic 30.0%
! CTACTACCTTCACAAATTTT+TGG + chr8.2:30642839-30642858 None:intergenic 30.0%
! GACATATTTCTACCCTTAAA+TGG - chr8.2:30643129-30643148 MS.gene037818:CDS 30.0%
! GGTCTTATCTTTATTCTACT+TGG + chr8.2:30639429-30639448 None:intergenic 30.0%
! TCCTTTTCAAACAGAAAGAA+AGG + chr8.2:30641560-30641579 None:intergenic 30.0%
! TCTATCATAGGCTTTCTTTT+AGG - chr8.2:30642445-30642464 MS.gene037818:intron 30.0%
!! AAATATGAATATGATGGTGG+TGG - chr8.2:30643171-30643190 MS.gene037818:CDS 30.0%
!! CAAACTGAGTTTTATAAGTC+AGG - chr8.2:30642698-30642717 MS.gene037818:intron 30.0%
!! GGCTTTTTAGTAGTGTATTT+AGG + chr8.2:30643031-30643050 None:intergenic 30.0%
!! TAGGCAAGAAGGTATTTAAA+AGG + chr8.2:30642072-30642091 None:intergenic 30.0%
!!! AGACCTAAATTTTGTTGTTG+TGG - chr8.2:30642985-30643004 MS.gene037818:intron 30.0%
!!! CATGATTCCTTTTTTGCTAT+TGG - chr8.2:30641021-30641040 MS.gene037818:intron 30.0%
!!! GTTTTTTCATGAACTGTTTG+TGG - chr8.2:30640877-30640896 MS.gene037818:intron 30.0%
AATATAATGAAGCTTGCGGA+TGG - chr8.2:30640579-30640598 MS.gene037818:intron 35.0%
ACCAACATTACCTGCAAAAA+AGG + chr8.2:30643329-30643348 None:intergenic 35.0%
AGTTGCAAGACAAAATCATC+TGG + chr8.2:30641831-30641850 None:intergenic 35.0%
ATCAACTTAGAAACGAGTCA+TGG - chr8.2:30640951-30640970 MS.gene037818:intron 35.0%
ATGTAGAAGTTTAGAGGGAA+GGG - chr8.2:30641522-30641541 MS.gene037818:intron 35.0%
ATTGATCGAGGAGAAAAACA+TGG - chr8.2:30639233-30639252 MS.gene037818:intron 35.0%
ATTTCCAGGATAATGTGCTT+AGG + chr8.2:30641108-30641127 None:intergenic 35.0%
CCACTAATACCTCCATTTAA+GGG + chr8.2:30643144-30643163 None:intergenic 35.0%
CCCTTTCTTTCTGTTTGAAA+AGG - chr8.2:30641556-30641575 MS.gene037818:intron 35.0%
CTTAGGATGTAGAAGTTTAG+AGG - chr8.2:30641516-30641535 MS.gene037818:intron 35.0%
GACTTTGATCTCAACTTACA+TGG + chr8.2:30641354-30641373 None:intergenic 35.0%
GATCTCAACTTACATGGTTT+GGG + chr8.2:30641348-30641367 None:intergenic 35.0%
GGTTTGTGTTTGTGATTATC+AGG + chr8.2:30643299-30643318 None:intergenic 35.0%
GTTATTAGGGAGAATACTGA+AGG - chr8.2:30639126-30639145 MS.gene037818:intron 35.0%
GTTCTTTGGATGGATAAGTT+AGG + chr8.2:30641691-30641710 None:intergenic 35.0%
TAAGCAAGAATCATTGCTGT+GGG - chr8.2:30641786-30641805 MS.gene037818:CDS 35.0%
TATTAGGGAGAATACTGAAG+GGG - chr8.2:30639128-30639147 MS.gene037818:intron 35.0%
TATTCACACATCAGATAACG+TGG + chr8.2:30642101-30642120 None:intergenic 35.0%
TCAGATAACGTGGTAAAAGT+AGG + chr8.2:30642091-30642110 None:intergenic 35.0%
TCTTTCTGTTTGAAAAGGAG+AGG - chr8.2:30641561-30641580 MS.gene037818:intron 35.0%
TCTTTGGATGGATAAGTTAG+GGG + chr8.2:30641689-30641708 None:intergenic 35.0%
TGAATCGATCCGTAAGAATA+AGG - chr8.2:30638951-30638970 MS.gene037818:intron 35.0%
TGATCTCAACTTACATGGTT+TGG + chr8.2:30641349-30641368 None:intergenic 35.0%
TGTTTATCCATGTCACAGAA+GGG + chr8.2:30641380-30641399 None:intergenic 35.0%
TTCTGTGACATGGATAAACA+AGG - chr8.2:30641380-30641399 MS.gene037818:intron 35.0%
TTGTTTATCCATGTCACAGA+AGG + chr8.2:30641381-30641400 None:intergenic 35.0%
TTTAATTCCAGGATACTTGG+TGG + chr8.2:30640634-30640653 None:intergenic 35.0%
TTTCTCTTTCCAAACCTCTT+AGG - chr8.2:30639958-30639977 MS.gene037818:intron 35.0%
TTTGAGAAATTCGACGTACA+TGG - chr8.2:30638898-30638917 MS.gene037818:CDS 35.0%
! ACCAGGTTTTCAAAAAGGTT+AGG + chr8.2:30642476-30642495 None:intergenic 35.0%
! ACTAAGTTGAAATGGTGTCA+AGG - chr8.2:30640193-30640212 MS.gene037818:intron 35.0%
! AGACTAATATGCAATGGGTT+AGG - chr8.2:30642579-30642598 MS.gene037818:intron 35.0%
! CACATACCATCTCTTTTGTT+TGG - chr8.2:30640773-30640792 MS.gene037818:intron 35.0%
! CCAGGTTTTCAAAAAGGTTA+GGG + chr8.2:30642475-30642494 None:intergenic 35.0%
! CTCTACAATCCCATTTTGTA+AGG - chr8.2:30639479-30639498 MS.gene037818:intron 35.0%
! GCTTGTCTAGATGATTGTTT+TGG - chr8.2:30642159-30642178 MS.gene037818:intron 35.0%
! TCAAGTCTTATCTCACTAAG+TGG + chr8.2:30639286-30639305 None:intergenic 35.0%
! TGTTGTACTGATGCAGTATT+GGG - chr8.2:30640426-30640445 MS.gene037818:intron 35.0%
! TTGTTGTACTGATGCAGTAT+TGG - chr8.2:30640425-30640444 MS.gene037818:intron 35.0%
! TTTCAACAGCGTTTTCCAAA+CGG + chr8.2:30643498-30643517 None:intergenic 35.0%
!! TCATAGGCTTTCTTTTAGGT+TGG - chr8.2:30642449-30642468 MS.gene037818:intron 35.0%
!! TGTTCTAAACTTGATGGACT+AGG - chr8.2:30642122-30642141 MS.gene037818:intron 35.0%
!!! GCGGTTTGACTTGATATTTT+TGG - chr8.2:30640457-30640476 MS.gene037818:intron 35.0%
AAAGTACATCTACATCCTCC+AGG + chr8.2:30641717-30641736 None:intergenic 40.0%
AAGATTCAGGGTAGGTCAAA+TGG + chr8.2:30641281-30641300 None:intergenic 40.0%
AAGTACATCTACATCCTCCA+GGG + chr8.2:30641716-30641735 None:intergenic 40.0%
AAGTTCGAACCTAAGAGGTT+TGG + chr8.2:30639970-30639989 None:intergenic 40.0%
ACAAAAGACAGCTAATCCAG+TGG - chr8.2:30643414-30643433 MS.gene037818:CDS 40.0%
ACCTTGCCAAACAAAAGAGA+TGG + chr8.2:30640782-30640801 None:intergenic 40.0%
ATCTCCTAAGCACATTATCC+TGG - chr8.2:30641101-30641120 MS.gene037818:intron 40.0%
ATGGACTCATAATACGAGTG+AGG + chr8.2:30640847-30640866 None:intergenic 40.0%
ATGGATAAGTTAGGGGAGAA+AGG + chr8.2:30641682-30641701 None:intergenic 40.0%
ATTTCGCTAATCAGCACGTT+TGG - chr8.2:30640081-30640100 MS.gene037818:intron 40.0%
CATCAAAAGTCGTGATGTTG+TGG + chr8.2:30639734-30639753 None:intergenic 40.0%
CCAGTATCTCACATCAATGA+CGG - chr8.2:30640123-30640142 MS.gene037818:intron 40.0%
CGTCATTGATGTGAGATACT+GGG + chr8.2:30640125-30640144 None:intergenic 40.0%
CTAAGCAAGAATCATTGCTG+TGG - chr8.2:30641785-30641804 MS.gene037818:CDS 40.0%
CTTATCTCACTAAGTGGTGT+CGG + chr8.2:30639280-30639299 None:intergenic 40.0%
GAAACGTACATGTAAGGAGA+AGG + chr8.2:30640025-30640044 None:intergenic 40.0%
GAAAGCCTATGATAGACAAC+AGG + chr8.2:30642441-30642460 None:intergenic 40.0%
GACAAAATCATCTGGACCTA+AGG + chr8.2:30641823-30641842 None:intergenic 40.0%
GAGGAAGAAACGTACATGTA+AGG + chr8.2:30640031-30640050 None:intergenic 40.0%
GAGGATGTAGATGTACTTTG+TGG - chr8.2:30641718-30641737 MS.gene037818:CDS 40.0%
GAGTAGAAAAGATTCAGGGT+AGG + chr8.2:30641289-30641308 None:intergenic 40.0%
GATGTAGAAGTTTAGAGGGA+AGG - chr8.2:30641521-30641540 MS.gene037818:intron 40.0%
GCCACTAATACCTCCATTTA+AGG + chr8.2:30643145-30643164 None:intergenic 40.0%
GGCTGAGAAGAACTGTTATT+TGG + chr8.2:30641247-30641266 None:intergenic 40.0%
GGTTTGTCTTAAAGGTGGAT+TGG - chr8.2:30638972-30638991 MS.gene037818:intron 40.0%
GTTCGCTTAATGTTCAGTTG+AGG - chr8.2:30639019-30639038 MS.gene037818:intron 40.0%
TACCATGACATCAAACTGCT+CGG + chr8.2:30640706-30640725 None:intergenic 40.0%
TAGGTTACCCCAAATCTGTA+TGG - chr8.2:30641930-30641949 MS.gene037818:intron 40.0%
TCAACGTTATCATGTCGAGT+AGG + chr8.2:30639099-30639118 None:intergenic 40.0%
TCACTTGCTTTCTGTTGTTC+AGG + chr8.2:30640542-30640561 None:intergenic 40.0%
TCTCATCAGCTATGATGCTT+AGG - chr8.2:30643446-30643465 MS.gene037818:CDS 40.0%
TCTGACCTGTTGTCTATCAT+AGG - chr8.2:30642433-30642452 MS.gene037818:intron 40.0%
TGACATGAAAGCTGTACCTA+CGG - chr8.2:30638921-30638940 MS.gene037818:CDS 40.0%
TGGATAAGTTAGGGGAGAAA+GGG + chr8.2:30641681-30641700 None:intergenic 40.0%
TTACAATTGCATATGTGGCC+AGG + chr8.2:30640059-30640078 None:intergenic 40.0%
! ACCTGCAAAAAAGGCACAAA+TGG + chr8.2:30643320-30643339 None:intergenic 40.0%
! ATCGATTCAAGAACTTCCGT+AGG + chr8.2:30638940-30638959 None:intergenic 40.0%
! GATGTGAGATACTGGGTTTT+GGG + chr8.2:30640118-30640137 None:intergenic 40.0%
! GATTTTGTCTTGCAACTCAC+TGG - chr8.2:30641834-30641853 MS.gene037818:intron 40.0%
! GCATACTTTTACCTTGTGCT+AGG - chr8.2:30641911-30641930 MS.gene037818:intron 40.0%
! TACTGCATCGACAACTTCTT+GGG + chr8.2:30643575-30643594 None:intergenic 40.0%
! TCATTCTAGAGGGCAAGTAT+CGG - chr8.2:30643521-30643540 MS.gene037818:CDS 40.0%
! TGATGTGAGATACTGGGTTT+TGG + chr8.2:30640119-30640138 None:intergenic 40.0%
! TTACTGCATCGACAACTTCT+TGG + chr8.2:30643576-30643595 None:intergenic 40.0%
!! AAACGTGCTGATTAGCGAAA+TGG + chr8.2:30640082-30640101 None:intergenic 40.0%
!! AAGTATCGGACAAAGGATCT+TGG - chr8.2:30643535-30643554 MS.gene037818:CDS 40.0%
!! ACCATCTCTTTTGTTTGGCA+AGG - chr8.2:30640778-30640797 MS.gene037818:intron 40.0%
!! ACGTTTCTTCCTCTAAAACC+TGG - chr8.2:30640038-30640057 MS.gene037818:intron 40.0%
!! CCCTAACCTTTTTGAAAACC+TGG - chr8.2:30642472-30642491 MS.gene037818:intron 40.0%
!! CCCTTAAATGGAGGTATTAG+TGG - chr8.2:30643141-30643160 MS.gene037818:CDS 40.0%
!! CTTTGAGATGGTGAATGGTT+CGG + chr8.2:30638743-30638762 None:intergenic 40.0%
!! TATGAATATGATGGTGGTGG+TGG - chr8.2:30643174-30643193 MS.gene037818:CDS 40.0%
!!! ACCATTTGTGCCTTTTTTGC+AGG - chr8.2:30643316-30643335 MS.gene037818:CDS 40.0%
!!! GCCTTTTTTGCAGGTAATGT+TGG - chr8.2:30643325-30643344 MS.gene037818:CDS 40.0%
!!! TGCTATTGGTTTTTCACTGC+TGG - chr8.2:30641035-30641054 MS.gene037818:intron 40.0%
AAGCGAAGCAGTCATGAATG+AGG - chr8.2:30639767-30639786 MS.gene037818:intron 45.0%
ACCATGACATCAAACTGCTC+GGG + chr8.2:30640705-30640724 None:intergenic 45.0%
AGAAGTTTAGAGGGAAGGGA+GGG - chr8.2:30641526-30641545 MS.gene037818:intron 45.0%
AGGTTGGGAACATGGGAAAA+AGG - chr8.2:30641067-30641086 MS.gene037818:intron 45.0%
AGTCAAACCCTTCTGTGACA+TGG - chr8.2:30641370-30641389 MS.gene037818:intron 45.0%
ATCCATCCAAAGAACAACCC+TGG - chr8.2:30641696-30641715 MS.gene037818:CDS 45.0%
ATCGGACAAAGGATCTTGGA+GGG - chr8.2:30643539-30643558 MS.gene037818:CDS 45.0%
ATTCAGGGTAGGTCAAATGG+AGG + chr8.2:30641278-30641297 None:intergenic 45.0%
CAAGAATCATTGCTGTGGGT+TGG - chr8.2:30641790-30641809 MS.gene037818:CDS 45.0%
CAGTCAAAGGTTGGGAACAT+GGG - chr8.2:30641060-30641079 MS.gene037818:intron 45.0%
CCGTCATTGATGTGAGATAC+TGG + chr8.2:30640126-30640145 None:intergenic 45.0%
CGCTTCCATTAGTTGCTCAA+CGG + chr8.2:30638860-30638879 None:intergenic 45.0%
CGTGGTAAAAGTAGGCAAGA+AGG + chr8.2:30642083-30642102 None:intergenic 45.0%
CTTAAGACTTTCGACGACAC+CGG + chr8.2:30639184-30639203 None:intergenic 45.0%
CTTGAACATGAGGTTGTTCC+CGG - chr8.2:30639162-30639181 MS.gene037818:intron 45.0%
GCTAATCAGCACGTTTGGTT+GGG - chr8.2:30640086-30640105 MS.gene037818:intron 45.0%
GGCATGTGTAAAGGAGAATG+TGG + chr8.2:30641327-30641346 None:intergenic 45.0%
GTACATGTAAGGAGAAGGCA+TGG + chr8.2:30640020-30640039 None:intergenic 45.0%
GTCAAGGCCAGGGTAATATT+TGG - chr8.2:30640209-30640228 MS.gene037818:intron 45.0%
GTTCTTGGAATCTTGTCGAG+AGG - chr8.2:30640605-30640624 MS.gene037818:intron 45.0%
TAGAAGTTTAGAGGGAAGGG+AGG - chr8.2:30641525-30641544 MS.gene037818:intron 45.0%
TATCGGACAAAGGATCTTGG+AGG - chr8.2:30643538-30643557 MS.gene037818:CDS 45.0%
TCAGTCAAAGGTTGGGAACA+TGG - chr8.2:30641059-30641078 MS.gene037818:intron 45.0%
TGTCTTGGGCAAACTAGACT+AGG - chr8.2:30643082-30643101 MS.gene037818:intron 45.0%
TTAAGACTTTCGACGACACC+GGG + chr8.2:30639183-30639202 None:intergenic 45.0%
TTAGGGGAGAAAGGGATTGA+AGG + chr8.2:30641673-30641692 None:intergenic 45.0%
! AATACTGAAGGGGAGTATGC+TGG - chr8.2:30639138-30639157 MS.gene037818:intron 45.0%
! AGATGGTGAATGGTTCGGAT+TGG + chr8.2:30638738-30638757 None:intergenic 45.0%
! ATTTGGGGTAACCTAGCACA+AGG + chr8.2:30641925-30641944 None:intergenic 45.0%
! CATGGTTTGGGCATGTGTAA+AGG + chr8.2:30641336-30641355 None:intergenic 45.0%
! GAGCTGTCGTCTACCATTTT+AGG - chr8.2:30640297-30640316 MS.gene037818:CDS 45.0%
! GATGGTGAATGGTTCGGATT+GGG + chr8.2:30638737-30638756 None:intergenic 45.0%
! GCAGTATTGGGTTGTGTTTG+CGG - chr8.2:30640438-30640457 MS.gene037818:intron 45.0%
! TGAATGGTTCGGATTGGGAT+CGG + chr8.2:30638732-30638751 None:intergenic 45.0%
! TTGAAATGGTGTCAAGGCCA+GGG - chr8.2:30640199-30640218 MS.gene037818:intron 45.0%
! TTGTTGGGTTTAGGGCTTCT+GGG - chr8.2:30643225-30643244 MS.gene037818:CDS 45.0%
!! AGGTGGATTGGTTACTCCTA+TGG - chr8.2:30638984-30639003 MS.gene037818:intron 45.0%
!! CATATGTGGCCAGGTTTTAG+AGG + chr8.2:30640050-30640069 None:intergenic 45.0%
!! CATCGCTTTGAGATGGTGAA+TGG + chr8.2:30638748-30638767 None:intergenic 45.0%
!! GGTGGATTGGTTACTCCTAT+GGG - chr8.2:30638985-30639004 MS.gene037818:intron 45.0%
!! GTATGCTGGTCTTGAACATG+AGG - chr8.2:30639152-30639171 MS.gene037818:intron 45.0%
!! GTGAAAGTACTGATGGTGGT+TGG - chr8.2:30643196-30643215 MS.gene037818:CDS 45.0%
!! GTGGGTTGGTTATCAACCTT+AGG - chr8.2:30641804-30641823 MS.gene037818:intron 45.0%
!! TGCTGGTTCAGTCAAAGGTT+GGG - chr8.2:30641052-30641071 MS.gene037818:intron 45.0%
!! TTCACTGCTGGTTCAGTCAA+AGG - chr8.2:30641047-30641066 MS.gene037818:intron 45.0%
!! ATATAAATATTTGAAAAATA+AGG - chr8.2:30640330-30640349 MS.gene037818:CDS 5.0%
CATCAAAAGCCTCTTCCCTC+AGG + chr8.2:30639819-30639838 None:intergenic 50.0%
CATCCAAAGAACAACCCTGG+AGG - chr8.2:30641699-30641718 MS.gene037818:CDS 50.0%
CATCCTCCAGGGTTGTTCTT+TGG + chr8.2:30641705-30641724 None:intergenic 50.0%
CCCAGAGCAAAATCTCCTGA+GGG - chr8.2:30639801-30639820 MS.gene037818:intron 50.0%
CCCTGTGCAAAAGCTCTTGA+GGG - chr8.2:30639921-30639940 MS.gene037818:intron 50.0%
CCTAGACAGTGAGTCAACAG+AGG + chr8.2:30642309-30642328 None:intergenic 50.0%
CGCTAATCAGCACGTTTGGT+TGG - chr8.2:30640085-30640104 MS.gene037818:intron 50.0%
CTAGTTGCAAATACTGCGGC+AGG - chr8.2:30641957-30641976 MS.gene037818:intron 50.0%
CTCCAGGGTTGTTCTTTGGA+TGG + chr8.2:30641701-30641720 None:intergenic 50.0%
GAACTAACACCACCACCCAT+AGG + chr8.2:30639003-30639022 None:intergenic 50.0%
GAAGTTTAGAGGGAAGGGAG+GGG - chr8.2:30641527-30641546 MS.gene037818:intron 50.0%
GAGCATGCTGTGTTTGAGCA+GGG - chr8.2:30643352-30643371 MS.gene037818:CDS 50.0%
GCAAAAGCTCTTGAGGGAAG+AGG - chr8.2:30639927-30639946 MS.gene037818:intron 50.0%
GCAAAATCTCCTGAGGGAAG+AGG - chr8.2:30639807-30639826 MS.gene037818:intron 50.0%
GGAGCTGGTTGTTGGGTTTA+GGG - chr8.2:30643217-30643236 MS.gene037818:CDS 50.0%
GGCAAACTAGACTAGGCCAT+AGG - chr8.2:30643089-30643108 MS.gene037818:intron 50.0%
GGTCAAATGGAGGCAGAGAA+AGG + chr8.2:30641268-30641287 None:intergenic 50.0%
GGTCAGCAAATGCAGGAAAC+TGG + chr8.2:30643477-30643496 None:intergenic 50.0%
GGTGCTTCAGCAGGAAATGT+TGG - chr8.2:30643373-30643392 MS.gene037818:CDS 50.0%
TCATGTCGAGTAGGTAACCC+AGG + chr8.2:30639090-30639109 None:intergenic 50.0%
TCCAAACGGTCAGCAAATGC+AGG + chr8.2:30643484-30643503 None:intergenic 50.0%
TGAGCATGCTGTGTTTGAGC+AGG - chr8.2:30643351-30643370 MS.gene037818:CDS 50.0%
TGGAGCTGGTTGTTGGGTTT+AGG - chr8.2:30643216-30643235 MS.gene037818:CDS 50.0%
TGTTCACGTCTCAGCATGAC+TGG + chr8.2:30642636-30642655 None:intergenic 50.0%
TTGGTTACTCCTATGGGTGG+TGG - chr8.2:30638991-30639010 MS.gene037818:intron 50.0%
! AAGGAGAAGGCATGGCAAGA+CGG + chr8.2:30640012-30640031 None:intergenic 50.0%
! AGCTTTTGCACAGGGGTTAC+GGG + chr8.2:30639916-30639935 None:intergenic 50.0%
! CCCTCAAGAGCTTTTGCACA+GGG + chr8.2:30639924-30639943 None:intergenic 50.0%
! CCCTCAGGAGATTTTGCTCT+GGG + chr8.2:30639804-30639823 None:intergenic 50.0%
! CCTCAAGAGCTTTTGCACAG+GGG + chr8.2:30639923-30639942 None:intergenic 50.0%
! CCTCAGGAGATTTTGCTCTG+GGG + chr8.2:30639803-30639822 None:intergenic 50.0%
! CTGAGGGAAGAGGCTTTTGA+TGG - chr8.2:30639817-30639836 MS.gene037818:intron 50.0%
! GAATGGTTCGGATTGGGATC+GGG + chr8.2:30638731-30638750 None:intergenic 50.0%
! GAGCTTTTGCACAGGGGTTA+CGG + chr8.2:30639917-30639936 None:intergenic 50.0%
! GTTGAAATGGTGTCAAGGCC+AGG - chr8.2:30640198-30640217 MS.gene037818:intron 50.0%
! GTTGTTGGGTTTAGGGCTTC+TGG - chr8.2:30643224-30643243 MS.gene037818:CDS 50.0%
! TATGTCGGGTTGTCTGACAG+AGG + chr8.2:30643115-30643134 None:intergenic 50.0%
! TCCCTCAAGAGCTTTTGCAC+AGG + chr8.2:30639925-30639944 None:intergenic 50.0%
! TCCCTCAGGAGATTTTGCTC+TGG + chr8.2:30639805-30639824 None:intergenic 50.0%
! TCCTGCATTTGCTGACCGTT+TGG - chr8.2:30643480-30643499 MS.gene037818:CDS 50.0%
! TGCATCGACAACTTCTTGGG+TGG + chr8.2:30643572-30643591 None:intergenic 50.0%
!! AGAGGGCAAGTATCGGACAA+AGG - chr8.2:30643528-30643547 MS.gene037818:CDS 50.0%
!! CCTCTGTTGACTCACTGTCT+AGG - chr8.2:30642306-30642325 MS.gene037818:intron 50.0%
!! CGGTGTCGTCGAAAGTCTTA+AGG - chr8.2:30639182-30639201 MS.gene037818:intron 50.0%
!! CTGCTGGTTCAGTCAAAGGT+TGG - chr8.2:30641051-30641070 MS.gene037818:intron 50.0%
!! GCTTGCGGATGGTTTGTTCT+TGG - chr8.2:30640590-30640609 MS.gene037818:intron 50.0%
!! GGATTGGTTACTCCTATGGG+TGG - chr8.2:30638988-30639007 MS.gene037818:intron 50.0%
!! GGTGGTGAAAGTACTGATGG+TGG - chr8.2:30643192-30643211 MS.gene037818:CDS 50.0%
!! GGTGGTGGTGAAAGTACTGA+TGG - chr8.2:30643189-30643208 MS.gene037818:CDS 50.0%
!! GGTTACGCATCGCTTTGAGA+TGG + chr8.2:30638755-30638774 None:intergenic 50.0%
!! TGAGAGGAGGTGTTTGAGGA+GGG + chr8.2:30638707-30638726 None:intergenic 50.0%
!! TTGAGAGGAGGTGTTTGAGG+AGG + chr8.2:30638708-30638727 None:intergenic 50.0%
CATTAGTTGCTCAACGGCGC+CGG + chr8.2:30638854-30638873 None:intergenic 55.0%
CCCCAGAGCAAAATCTCCTG+AGG - chr8.2:30639800-30639819 MS.gene037818:intron 55.0%
CCCCTGTGCAAAAGCTCTTG+AGG - chr8.2:30639920-30639939 MS.gene037818:intron 55.0%
GAGGTTGCCACCAAGTATCC+TGG - chr8.2:30640624-30640643 MS.gene037818:intron 55.0%
GCCCGAGCAGTTTGATGTCA+TGG - chr8.2:30640701-30640720 MS.gene037818:intron 55.0%
GGTGGTTGGAGCTGGTTGTT+GGG - chr8.2:30643210-30643229 MS.gene037818:CDS 55.0%
GGTTGTCTGACAGAGGCCTA+TGG + chr8.2:30643108-30643127 None:intergenic 55.0%
GTAACCTACATGCACCGTCC+CGG - chr8.2:30638769-30638788 MS.gene037818:CDS 55.0%
TGGCAAGACGGAGCCATTCA+AGG + chr8.2:30640000-30640019 None:intergenic 55.0%
TGGTGGTTGGAGCTGGTTGT+TGG - chr8.2:30643209-30643228 MS.gene037818:CDS 55.0%
! AATACTGCGGCAGGCATTGC+TGG - chr8.2:30641966-30641985 MS.gene037818:intron 55.0%
! GAGGTGTTTGAGGAGGGGTA+TGG + chr8.2:30638701-30638720 None:intergenic 55.0%
! GCTTTTGCACAGGGGTTACG+GGG + chr8.2:30639915-30639934 None:intergenic 55.0%
! TTTGAGCAGGGTGCTTCAGC+AGG - chr8.2:30643364-30643383 MS.gene037818:CDS 55.0%
!! ATTGGGATCGGGTTGAGAGG+AGG + chr8.2:30638720-30638739 None:intergenic 55.0%
!! GAGAGGAGGTGTTTGAGGAG+GGG + chr8.2:30638706-30638725 None:intergenic 55.0%
!! GATGAGAGAAGAAGCGCCAC+TGG + chr8.2:30643433-30643452 None:intergenic 55.0%
!! GGGTTGAGAGGAGGTGTTTG+AGG + chr8.2:30638711-30638730 None:intergenic 55.0%
!! GTACTGATGGTGGTTGGAGC+TGG - chr8.2:30643202-30643221 MS.gene037818:CDS 55.0%
CGGCGCCGTTGAGCAACTAA+TGG - chr8.2:30638852-30638871 MS.gene037818:CDS 60.0%
CGGGGATTAGGGTTACGGGA+CGG + chr8.2:30638807-30638826 None:intergenic 60.0%
CGTCCCGTAACCCTAATCCC+CGG - chr8.2:30638805-30638824 MS.gene037818:CDS 60.0%
GATTAGGGTTACGGGACGGG+GGG + chr8.2:30638803-30638822 None:intergenic 60.0%
GGATTAGGGTTACGGGACGG+GGG + chr8.2:30638804-30638823 None:intergenic 60.0%
GGGATTAGGGTTACGGGACG+GGG + chr8.2:30638805-30638824 None:intergenic 60.0%
GGGGATTAGGGTTACGGGAC+GGG + chr8.2:30638806-30638825 None:intergenic 60.0%
GTAACCCTAATCCCCGGCGA+CGG - chr8.2:30638811-30638830 MS.gene037818:CDS 60.0%
GTCGCCGGGGATTAGGGTTA+CGG + chr8.2:30638812-30638831 None:intergenic 60.0%
TAACCCTAATCCCCGGCGAC+GGG - chr8.2:30638812-30638831 MS.gene037818:CDS 60.0%
TCGCCGGGGATTAGGGTTAC+GGG + chr8.2:30638811-30638830 None:intergenic 60.0%
!! CGGATTGGGATCGGGTTGAG+AGG + chr8.2:30638723-30638742 None:intergenic 60.0%
CTAATCCCCGGCGACGGGAT+CGG - chr8.2:30638817-30638836 MS.gene037818:CDS 65.0%
GATCCCGTCGCCGGGGATTA+GGG + chr8.2:30638818-30638837 None:intergenic 65.0%
GGGATCGGCCCACTCGTAAC+CGG - chr8.2:30638832-30638851 MS.gene037818:CDS 65.0%
TACATGCACCGTCCCGGCGA+CGG - chr8.2:30638775-30638794 MS.gene037818:CDS 65.0%
! ACTGCGGCAGGCATTGCTGG+AGG - chr8.2:30641969-30641988 MS.gene037818:intron 65.0%
! GCAGGCATTGCTGGAGGCAC+TGG - chr8.2:30641975-30641994 MS.gene037818:intron 65.0%
! GGCACTGGAGTCATGCCAGG+AGG - chr8.2:30641990-30642009 MS.gene037818:intron 65.0%
!! CAACGGCGCCGGTTACGAGT+GGG + chr8.2:30638843-30638862 None:intergenic 65.0%
!! GGAGGCACTGGAGTCATGCC+AGG - chr8.2:30641987-30642006 MS.gene037818:intron 65.0%
!! TCAACGGCGCCGGTTACGAG+TGG + chr8.2:30638844-30638863 None:intergenic 65.0%
CGATCCCGTCGCCGGGGATT+AGG + chr8.2:30638819-30638838 None:intergenic 70.0%
GTCGCCGGGACGGTGCATGT+AGG + chr8.2:30638776-30638795 None:intergenic 70.0%
AGTGGGCCGATCCCGTCGCC+GGG + chr8.2:30638826-30638845 None:intergenic 75.0%
GAGTGGGCCGATCCCGTCGC+CGG + chr8.2:30638827-30638846 None:intergenic 75.0%
! GGACGGGGGGTTCCGTCGCC+GGG + chr8.2:30638790-30638809 None:intergenic 80.0%
! GGGACGGGGGGTTCCGTCGC+CGG + chr8.2:30638791-30638810 None:intergenic 80.0%
! GGGGGGTTCCGTCGCCGGGA+CGG + chr8.2:30638786-30638805 None:intergenic 80.0%
! GTGGGCCGATCCCGTCGCCG+GGG + chr8.2:30638825-30638844 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 30638682 30643612 30638682 ID=MS.gene037818
chr8.2 mRNA 30638682 30643612 30638682 ID=MS.gene037818.t1;Parent=MS.gene037818
chr8.2 exon 30643091 30643612 30643091 ID=MS.gene037818.t1.exon1;Parent=MS.gene037818.t1
chr8.2 CDS 30643091 30643612 30643091 ID=cds.MS.gene037818.t1;Parent=MS.gene037818.t1
chr8.2 exon 30641572 30641811 30641572 ID=MS.gene037818.t1.exon2;Parent=MS.gene037818.t1
chr8.2 CDS 30641572 30641811 30641572 ID=cds.MS.gene037818.t1;Parent=MS.gene037818.t1
chr8.2 exon 30640283 30640361 30640283 ID=MS.gene037818.t1.exon3;Parent=MS.gene037818.t1
chr8.2 CDS 30640283 30640361 30640283 ID=cds.MS.gene037818.t1;Parent=MS.gene037818.t1
chr8.2 exon 30638682 30638956 30638682 ID=MS.gene037818.t1.exon4;Parent=MS.gene037818.t1
chr8.2 CDS 30638682 30638956 30638682 ID=cds.MS.gene037818.t1;Parent=MS.gene037818.t1
Gene Sequence

>MS.gene037818

ATGGCAACAAGAAGATCCATACCCCTCCTCAAACACCTCCTCTCAACCCGATCCCAATCCGAACCATTCACCATCTCAAAGCGATGCGTAACCTACATGCACCGTCCCGGCGACGGAACCCCCCGTCCCGTAACCCTAATCCCCGGCGACGGGATCGGCCCACTCGTAACCGGCGCCGTTGAGCAACTAATGGAAGCGATGCACGCGCCAGTTTACTTTGAGAAATTCGACGTACATGGTGACATGAAAGCTGTACCTACGGAAGTTCTTGAATCGATCCGTAAGAATAAGGTTTGTCTTAAAGGTGGATTGGTTACTCCTATGGGTGGTGGTGTTAGTTCGCTTAATGTTCAGTTGAGGAAAGAGCTTGATCTTTATGCTTCGCTTGTTAATTGTTTTAATCTTCCTGGGTTACCTACTCGACATGATAACGTTGATATTGTAGTTATTAGGGAGAATACTGAAGGGGAGTATGCTGGTCTTGAACATGAGGTTGTTCCCGGTGTCGTCGAAAGTCTTAAGGTATAATTTCTATCATTTCTTTGTTTTATATTGATCGAGGAGAAAAACATGGTTTTTGATAGAGCATTTGTAGCCGACACCACTTAGTGAGATAAGACTTGATTGTTGTTGTTGTTGCTATGATTTCGATTTGAAGTTGTTTGTAGTGTGGAATAAGAAAAATTCAAAATTAAAATCATTAAATTCTTGTGTATGATTGAGATTTGAGAATATCGGAAAAATCCAAGTAGAATAAAGATAAGACCTGAAATGAGTTTATAAAGAGTTACTTCTAACTCTACAATCCCATTTTGTAAGGATGAGTTAGACTTAATCTTAGAACCTAATAGAGAATCCATAATGTTCTTTAGACACTTATGTTTGCAAGGGAAATCCAATTATAGTCATTTTTATAATAATTTTAGGTTTGAGTAGGATTTTGAATATTTTAAGGAATGAATATTAATTTGAAATTTCATAAATGTGTAGGGATTAGTTTATTTCTTAATTTTGTGGTTTCTTAAAAAGGTTTGTGATTGCAATATGGGCCACAACATCACGACTTTTGATGTCTTTGCGACTGTAAGCGAAGCAGTCATGAATGAGGTTGCTTGTAACCCCAGAGCAAAATCTCCTGAGGGAAGAGGCTTTTGATGGCTTTCAATCTTGTAGCCAATAAACTAGGTTATTGATTGAAAATAGATGTATTACAGAAGGAACTAAGAAGCTCCCCGTAACCCCTGTGCAAAAGCTCTTGAGGGAAGAGGCATTTCTCTTTCTCTTTCCAAACCTCTTAGGTTCGAACTTAAATTAACCTTGAATGGCTCCGTCTTGCCATGCCTTCTCCTTACATGTACGTTTCTTCCTCTAAAACCTGGCCACATATGCAATTGTAACCATTTCGCTAATCAGCACGTTTGGTTGGGCTCAGTCCCAAAACCCAGTATCTCACATCAATGACGGTGACACAACTTCAATTTAAAACCTTGGTTAAGTATTCAACATTGGAAACTAAGTTGAAATGGTGTCAAGGCCAGGGTAATATTTGGATTAAAACGAGTCACAATTACCAAATTCAGTACTTTTTTTTTTGTTTTCGTTAATTTTATTGACTGAGCTGTCGTCTACCATTTTAGGACATACTTATATATAAATATTTGAAAAATAAGGAATGAAAGTAGAAAACATTCTCACAAATTATATAGGTTCTTTTCCTTTGGAATATCTATCTAGATTTTTTTGTTGTTGTACTGATGCAGTATTGGGTTGTGTTTGCGGTTTGACTTGATATTTTTGGTAGGTGATAACAAAGTTCTGTTCTGAGCGTATTGCTAAATACGCGTTCGAGTATGCTTACCTGAACAACAGAAAGCAAGTGACTGCTGTCCACAAAGCAAATATAATGAAGCTTGCGGATGGTTTGTTCTTGGAATCTTGTCGAGAGGTTGCCACCAAGTATCCTGGAATTAAATACAACGAAATTATTGTGGACAATTGTTGCATGCAGCTTGTTTCAAAGCCCGAGCAGTTTGATGTCATGGTATGTAAAATTTATCCATTTTTCTTTAATCTATGATGGAGTAAAGTAAACACATACCATCTCTTTTGTTTGGCAAGGTTTTTAACTTTGTACTATTATATTATTCGTGATAAAAACAACTCCTCACTCGTATTATGAGTCCATTTGCATTTCCGTTTTTTCATGAACTGTTTGTGGTGCTTGAGAAAACACTTTTCTTACTGACAATTAATGACTTCTACTATCAATATCAACTTAGAAACGAGTCATGGCTGACAGCAAGACTAAGAGAAACAAGAGCTGAGTTGCTCGTATAGATCATGATTCCTTTTTTGCTATTGGTTTTTCACTGCTGGTTCAGTCAAAGGTTGGGAACATGGGAAAAAGGAAAAAAAGATTATCTCCTAAGCACATTATCCTGGAAATTAAGAACTATTAGAATTTATGACAAAGAAACTACGCATAAACATCACCAGAAACATTTATAAAATTGAGAGTCTGAATGTTATGTTCCAACAGCATCTGATAATTGTTAACATGGACCAAATAACAGTTCTTCTCAGCCTTTCTCTGCCTCCATTTGACCTACCCTGAATCTTTTCTACTCTCTATACTATGACATCCACATTCTCCTTTACACATGCCCAAACCATGTAAGTTGAGATCAAAGTCAAACCCTTCTGTGACATGGATAAACAAGGTTTGAATGTCTAGGAAATATATTTACTTATTTCCCTTGTTCATTCATGTGTAGATAGATAAAGTTATGATTTGTGATTCAGAATAGTGTAGTAGTCTTCAACCTTTAACGTATCTTAGGATGTAGAAGTTTAGAGGGAAGGGAGGGGAATTTTCCCTTTCTTTCTGTTTGAAAAGGAGAGGAATAAAATGATCGATCGCCACTTAACTTTATAAATTCACTTTCATTTTTAAAAACATTATATCACTCCAAAGTTTTTAAACATTAACCTTCAATCCCTTTCTCCCCTAACTTATCCATCCAAAGAACAACCCTGGAGGATGTAGATGTACTTTGTGGAATATTGAAGGGACAAGTAAATTTTTCTTTTCTTTTCTATTGATCTAAGCAAGAATCATTGCTGTGGGTTGGTTATCAACCTTAGGTCCAGATGATTTTGTCTTGCAACTCACTGGTTTTCACAATTTGTTTCTGATTTTTAGTTGAATAAAAGTAGCTTTGATATTCATGCATACTTTTACCTTGTGCTAGGTTACCCCAAATCTGTATGGAAATCTAGTTGCAAATACTGCGGCAGGCATTGCTGGAGGCACTGGAGTCATGCCAGGAGGTATAGTTTTTAGTTACTACTGTATTGCAACCTTAGAGCTTTGATCTGATTATGTTTCCTTTTAAATACCTTCTTGCCTACTTTTACCACGTTATCTGATGTGTGAATAATGTTCTAAACTTGATGGACTAGGCACATATGTTATGTGCTTGTCTAGATGATTGTTTTGGAGAACACTTTTATTTATCGAAAAACTTTGCAAATAAACACTACATTAAATTTGTCTGTTTGATCATATCATCAAGCTAGAATATCATTAACTACATTAACATCTGGAAGTATCATAGATGACTGCCTCTGTTGACTCACTGTCTAGGTAATGCAGCAATTAATGATGTTAGTGAAAACAAATGTTTCTGTATTCATATTAGTGAAATGTGTGCAAATGGACCCAAACAATTCAAAAAATTCAAGGTTTAAATCTGACCTGTTGTCTATCATAGGCTTTCTTTTAGGTTGGCCCTAACCTTTTTGAAAACCTGGTATAAATTGTTTAGTCTACTTAAAGACCTATTTCATATTAATGTCTTTAAATAAATTATCCAACCTATATTTAATTAGTCTAACAGACTAATATGCAATGGGTTAGGTTCTCTTTATAATAAGAAGATAAAATTAAAACCAGTCATGCTGAGACGTGAACATGATACAGAAGTAGAAATAGACAGAAGTAGAAATAAATGGGACAAACTGAGTTTTATAAGTCAGGTTCTGATTTGTTTGTTTGTATAATTTTTTTTGAGGTCTTTCATGGCATTTTAAAGAATTTGACCTAATATGATAACCTGTTTAAATTTTATTTTACAGTAAGACATTTAAATATGCCAAAAATTTGTGAAGGTAGTAGTATGGATCAATTATTGAAAATGTTACAAACATATAATCTAACACATTGTACAAATTTCAATATAATAATAACAATAATAGAAATAAAAAGTTATTATTTATACTTACTTAACTATGTTGATATGTTAGACCTAAATTTTGTTGTTGTGGCATGAAGCATGACCTATTTACCTAAATACACTACTAAAAAGCCTCAACTCTGTCTACATAATAAAATGTCTGATTGTCTTGGGCAAACTAGACTAGGCCATAGGCCTCTGTCAGACAACCCGACATATTTCTACCCTTAAATGGAGGTATTAGTGGCTATGTGAAATATGAATATGATGGTGGTGGTGGTGAAAGTACTGATGGTGGTTGGAGCTGGTTGTTGGGTTTAGGGCTTCTGGGTAGAAGTTATATTATTCAGAAACATGATTCTCTGTTGTCACATTATAGCCTGATAATCACAAACACAAACCATTTGTGCCTTTTTTGCAGGTAATGTTGGTGCTGAGCATGCTGTGTTTGAGCAGGGTGCTTCAGCAGGAAATGTTGGTAATGAGAAAGTAGCTGCACAAAAGACAGCTAATCCAGTGGCGCTTCTTCTCTCATCAGCTATGATGCTTAGGCATCTCCAGTTTCCTGCATTTGCTGACCGTTTGGAAAACGCTGTTGAAAAAGTCATTCTAGAGGGCAAGTATCGGACAAAGGATCTTGGAGGGACAAGTACCACCCAAGAAGTTGTCGATGCAGTAATAGATGCTTTAGATTGA

Protein sequence

>MS.gene037818.t1

MATRRSIPLLKHLLSTRSQSEPFTISKRCVTYMHRPGDGTPRPVTLIPGDGIGPLVTGAVEQLMEAMHAPVYFEKFDVHGDMKAVPTEVLESIRKNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKQVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGNEKVAAQKTANPVALLLSSAMMLRHLQFPAFADRLENAVEKVILEGKYRTKDLGGTSTTQEVVDAVIDALD