Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65298.t1 | XP_003612317.1 | 98.6 | 367 | 5 | 0 | 1 | 367 | 1 | 367 | 6.10E-201 | 709.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65298.t1 | P93032 | 82.6 | 362 | 62 | 1 | 3 | 363 | 2 | 363 | 1.1e-166 | 587.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65298.t1 | G7K008 | 98.6 | 367 | 5 | 0 | 1 | 367 | 1 | 367 | 4.4e-201 | 709.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene65298 | MS.gene23789 | PPI |
MS.gene65298 | MS.gene055904 | PPI |
MS.gene65298 | MS.gene012996 | PPI |
MS.gene65298 | MS.gene83571 | PPI |
MS.gene65298 | MS.gene037818 | PPI |
MS.gene65298 | MS.gene64856 | PPI |
MS.gene017544 | MS.gene65298 | PPI |
MS.gene85935 | MS.gene65298 | PPI |
MS.gene38729 | MS.gene65298 | PPI |
MS.gene65298 | MS.gene27219 | PPI |
MS.gene65298 | MS.gene86974 | PPI |
MS.gene86974 | MS.gene65298 | PPI |
MS.gene65298 | MS.gene064489 | PPI |
MS.gene65298 | MS.gene054629 | PPI |
MS.gene27219 | MS.gene65298 | PPI |
MS.gene65298 | MS.gene067451 | PPI |
MS.gene65298 | MS.gene38729 | PPI |
MS.gene65298 | MS.gene85935 | PPI |
MS.gene65298 | MS.gene48488 | PPI |
MS.gene65298 | MS.gene24619 | PPI |
MS.gene65298 | MS.gene67551 | PPI |
MS.gene65298 | MS.gene029815 | PPI |
MS.gene65298 | MS.gene68356 | PPI |
MS.gene65298 | MS.gene017544 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65298.t1 | MTR_5g023740 | 98.638 | 367 | 5 | 0 | 1 | 367 | 1 | 367 | 0.0 | 743 |
MS.gene65298.t1 | MTR_5g023740 | 97.548 | 367 | 5 | 1 | 1 | 367 | 1 | 363 | 0.0 | 729 |
MS.gene65298.t1 | MTR_8g074030 | 88.441 | 372 | 37 | 2 | 1 | 367 | 1 | 371 | 0.0 | 673 |
MS.gene65298.t1 | MTR_8g074030 | 87.366 | 372 | 37 | 3 | 1 | 367 | 1 | 367 | 0.0 | 660 |
MS.gene65298.t1 | MTR_5g023740 | 98.195 | 277 | 5 | 0 | 1 | 277 | 1 | 277 | 0.0 | 563 |
MS.gene65298.t1 | MTR_5g023740 | 98.195 | 277 | 5 | 0 | 1 | 277 | 1 | 277 | 0.0 | 562 |
MS.gene65298.t1 | MTR_5g023740 | 96.751 | 277 | 5 | 1 | 1 | 277 | 1 | 273 | 0.0 | 551 |
MS.gene65298.t1 | MTR_1g064070 | 48.634 | 366 | 174 | 5 | 6 | 366 | 2 | 358 | 1.03e-118 | 348 |
MS.gene65298.t1 | MTR_3g101470 | 48.732 | 355 | 169 | 3 | 17 | 366 | 7 | 353 | 1.35e-116 | 342 |
MS.gene65298.t1 | MTR_2g104610 | 29.132 | 357 | 197 | 15 | 32 | 349 | 35 | 374 | 7.26e-28 | 113 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65298.t1 | AT4G35260 | 84.973 | 366 | 54 | 1 | 3 | 367 | 2 | 367 | 0.0 | 637 |
MS.gene65298.t1 | AT4G35650 | 81.421 | 366 | 66 | 1 | 4 | 367 | 3 | 368 | 0.0 | 627 |
MS.gene65298.t1 | AT2G17130 | 81.967 | 366 | 65 | 1 | 3 | 367 | 2 | 367 | 0.0 | 617 |
MS.gene65298.t1 | AT2G17130 | 80.874 | 366 | 65 | 2 | 3 | 367 | 2 | 363 | 0.0 | 605 |
MS.gene65298.t1 | AT5G03290 | 51.190 | 336 | 156 | 2 | 36 | 366 | 42 | 374 | 1.75e-117 | 345 |
MS.gene65298.t1 | AT3G09810 | 51.190 | 336 | 156 | 4 | 36 | 366 | 42 | 374 | 8.08e-113 | 333 |
MS.gene65298.t1 | AT1G32480 | 62.500 | 224 | 69 | 5 | 37 | 257 | 2 | 213 | 1.16e-90 | 271 |
MS.gene65298.t1 | AT1G80560 | 29.630 | 351 | 197 | 13 | 40 | 354 | 45 | 381 | 1.48e-30 | 120 |
MS.gene65298.t1 | AT5G14200 | 28.792 | 389 | 224 | 16 | 1 | 349 | 5 | 380 | 1.59e-30 | 120 |
MS.gene65298.t1 | AT5G14200 | 28.792 | 389 | 224 | 16 | 1 | 349 | 5 | 380 | 1.63e-30 | 120 |
MS.gene65298.t1 | AT1G31180 | 28.974 | 390 | 223 | 16 | 1 | 349 | 1 | 377 | 2.74e-30 | 120 |
MS.gene65298.t1 | AT1G31180 | 28.974 | 390 | 223 | 16 | 1 | 349 | 16 | 392 | 4.45e-30 | 119 |
MS.gene65298.t1 | AT5G14200 | 26.596 | 282 | 165 | 10 | 1 | 246 | 5 | 280 | 3.38e-13 | 70.1 |
Find 107 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGATTCCGTCGCCGGGGATT+AGG | 0.169058 | 5.2:+14599475 | None:intergenic |
ATGTTGATATTGTTGTTATT+AGG | 0.236899 | 5.2:-14599179 | MS.gene65298:CDS |
GGGGATTAGGGTTACATTGC+GGG | 0.275523 | 5.2:+14599488 | None:intergenic |
TGTTGATATTGTTGTTATTA+GGG | 0.290952 | 5.2:-14599178 | MS.gene65298:CDS |
GCTTGCAGATGGTTTATTCT+TGG | 0.304514 | 5.2:-14597107 | MS.gene65298:CDS |
GATTCCGTCGCCGGGGATTA+GGG | 0.344303 | 5.2:+14599476 | None:intergenic |
GTGGGTGAGGTGGTGGCGCG+TGG | 0.349708 | 5.2:+14599554 | None:intergenic |
AACAAGATTTCCATAAAGAT+TGG | 0.353298 | 5.2:+14595611 | None:intergenic |
CTTGAACATGAGGTTGTTCC+CGG | 0.354977 | 5.2:-14599129 | MS.gene65298:CDS |
GCTTGTCAGTTGCTTTAATC+TGG | 0.358844 | 5.2:-14599226 | MS.gene65298:CDS |
AATACAGCGGCAGGCATTGC+TGG | 0.369556 | 5.2:-14595585 | MS.gene65298:CDS |
ATTTCATTATACTTGATTCC+AGG | 0.392374 | 5.2:+14597055 | None:intergenic |
ATCTGGAAGGATTGACTACT+AGG | 0.394728 | 5.2:-14599209 | MS.gene65298:CDS |
ACAAGATTTCCATAAAGATT+GGG | 0.395363 | 5.2:+14595612 | None:intergenic |
GGAATCGATTAAGAAGAATA+AGG | 0.408209 | 5.2:-14599340 | MS.gene65298:CDS |
GGGGTTCCGTCTCCGGGGCG+GGG | 0.409508 | 5.2:+14599510 | None:intergenic |
GGCATGTAGGTTACGGTACG+GGG | 0.414877 | 5.2:+14599531 | None:intergenic |
TCCAATCGTTCAGCAAATAC+AGG | 0.416645 | 5.2:+14594566 | None:intergenic |
GGGATTAGGGTTACATTGCG+GGG | 0.421936 | 5.2:+14599489 | None:intergenic |
ATGTCTTTGCAGGTAATGTT+GGG | 0.422079 | 5.2:-14594721 | MS.gene65298:intron |
GGAATCGGCCCTCTCGTAAC+CGG | 0.429953 | 5.2:-14599459 | MS.gene65298:CDS |
GGGCATGTAGGTTACGGTAC+GGG | 0.430343 | 5.2:+14599530 | None:intergenic |
CTTGATTCCAGGATACTTTG+TGG | 0.435276 | 5.2:+14597066 | None:intergenic |
TCCTGTATTTGCTGAACGAT+TGG | 0.436123 | 5.2:-14594567 | MS.gene65298:CDS |
GCAGGCATTGCTGGAGGCAC+TGG | 0.441704 | 5.2:-14595576 | MS.gene65298:CDS |
CTAATCCCCGGCGACGGAAT+CGG | 0.445934 | 5.2:-14599474 | MS.gene65298:CDS |
CGGGGATTAGGGTTACATTG+CGG | 0.449437 | 5.2:+14599487 | None:intergenic |
AAGAATAAGGTCTGTTTGAA+AGG | 0.455164 | 5.2:-14599327 | MS.gene65298:CDS |
GTCTCCGGGGCGGGGCATGT+AGG | 0.455315 | 5.2:+14599518 | None:intergenic |
TCGAATTTCTCGAAGTGCAC+TGG | 0.458066 | 5.2:+14599402 | None:intergenic |
GGAGGCACTGGTGTCATGCC+GGG | 0.461037 | 5.2:-14595564 | MS.gene65298:CDS |
TACTGCATCAACAACCTCTT+GGG | 0.461914 | 5.2:+14594475 | None:intergenic |
GGGTGGTGCTTGTCCCTCCA+AGG | 0.470554 | 5.2:+14594495 | None:intergenic |
ATCGATTCCATCACTTCAGA+TGG | 0.475497 | 5.2:+14599354 | None:intergenic |
TTACTGCATCAACAACCTCT+TGG | 0.475996 | 5.2:+14594474 | None:intergenic |
AGAGGGCCGATTCCGTCGCC+GGG | 0.478788 | 5.2:+14599468 | None:intergenic |
GCCTGAGCAATTTGATGTCA+TGG | 0.486144 | 5.2:-14596996 | MS.gene65298:intron |
CTTGTTGCAAATACAGCGGC+AGG | 0.486316 | 5.2:-14595594 | MS.gene65298:CDS |
AAGGAGAAGTGCCACAGGAT+TGG | 0.491158 | 5.2:+14594622 | None:intergenic |
AAGGTGTTTGAGGAGGTTTG+TGG | 0.493042 | 5.2:+14599581 | None:intergenic |
GAGAGGGCCGATTCCGTCGC+CGG | 0.493954 | 5.2:+14599467 | None:intergenic |
GGATTAGGGTTACATTGCGG+GGG | 0.495232 | 5.2:+14599490 | None:intergenic |
GTCAGTTGCTTTAATCTGGA+AGG | 0.496580 | 5.2:-14599222 | MS.gene65298:CDS |
TGGAGGCACTGGTGTCATGC+CGG | 0.510683 | 5.2:-14595565 | MS.gene65298:CDS |
TTGGCGACTCCGATGGGTGG+TGG | 0.513125 | 5.2:-14599300 | MS.gene65298:CDS |
GAGGTTGCCACAAAGTATCC+TGG | 0.516332 | 5.2:-14597073 | MS.gene65298:CDS |
CATTACTTGCTCAACAGCGC+CGG | 0.519638 | 5.2:+14599440 | None:intergenic |
AATAAGGTCTGTTTGAAAGG+TGG | 0.522695 | 5.2:-14599324 | MS.gene65298:CDS |
GCGTGGAGATAAGGTGTTTG+AGG | 0.525687 | 5.2:+14599571 | None:intergenic |
AATGTCTTTGCAGGTAATGT+TGG | 0.527179 | 5.2:-14594722 | MS.gene65298:intron |
CAAGATTTCCATAAAGATTG+GGG | 0.528612 | 5.2:+14595613 | None:intergenic |
GCTTAATTTGCAGCTGAGGA+AGG | 0.528655 | 5.2:-14599268 | MS.gene65298:CDS |
TGAGCATCATTGCGGAAGAA+AGG | 0.530564 | 5.2:+14594603 | None:intergenic |
GGGGCGGGGCATGTAGGTTA+CGG | 0.533314 | 5.2:+14599524 | None:intergenic |
TACATGCCCCGCCCCGGAGA+CGG | 0.536211 | 5.2:-14599516 | MS.gene65298:CDS |
TTTGAACAAGGTGCTTCCGC+AGG | 0.536373 | 5.2:-14594683 | MS.gene65298:CDS |
GTTATTAGGGAGAATACTGA+AGG | 0.537381 | 5.2:-14599165 | MS.gene65298:CDS |
GGTGGTGGCGCGTGGAGATA+AGG | 0.541475 | 5.2:+14599562 | None:intergenic |
CGGCGCTGTTGAGCAAGTAA+TGG | 0.541644 | 5.2:-14599439 | MS.gene65298:CDS |
GGTGGATTGGCGACTCCGAT+GGG | 0.544930 | 5.2:-14599306 | MS.gene65298:CDS |
TTGAGACTCTCAACGACACC+GGG | 0.546059 | 5.2:+14599111 | None:intergenic |
GGTCTGTTTGAAAGGTGGAT+TGG | 0.550611 | 5.2:-14599319 | MS.gene65298:CDS |
AGCGATTCCATCTGAAGTGA+TGG | 0.550636 | 5.2:-14599361 | MS.gene65298:CDS |
AGGTGGATTGGCGACTCCGA+TGG | 0.556949 | 5.2:-14599307 | MS.gene65298:CDS |
AACATTATGAAGCTTGCAGA+TGG | 0.557251 | 5.2:-14597118 | MS.gene65298:CDS |
ACCATGACATCAAATTGCTC+AGG | 0.558319 | 5.2:+14596995 | None:intergenic |
GGTGCTTCCGCAGGAAATGT+TGG | 0.560130 | 5.2:-14594674 | MS.gene65298:CDS |
GATTAGGGTTACATTGCGGG+GGG | 0.563580 | 5.2:+14599491 | None:intergenic |
CGCAATGTAACCCTAATCCC+CGG | 0.573917 | 5.2:-14599486 | MS.gene65298:CDS |
TTCCGCAGGAAATGTTGGTA+AGG | 0.574592 | 5.2:-14594669 | MS.gene65298:CDS |
AATACTGAAGGGGAATATGC+TGG | 0.581107 | 5.2:-14599153 | MS.gene65298:CDS |
CTTGAGACTCTCAACGACAC+CGG | 0.585873 | 5.2:+14599110 | None:intergenic |
ATTCTTGGAATCTTGTCGAG+AGG | 0.590626 | 5.2:-14597092 | MS.gene65298:CDS |
GGATTGGCGACTCCGATGGG+TGG | 0.593367 | 5.2:-14599303 | MS.gene65298:CDS |
GTAACCCTAATCCCCGGCGA+CGG | 0.593645 | 5.2:-14599480 | MS.gene65298:CDS |
TACAGGACAAAGGACCTTGG+AGG | 0.595343 | 5.2:-14594509 | MS.gene65298:CDS |
GTATCTAAATAACAGAAAGA+AGG | 0.597022 | 5.2:-14597161 | MS.gene65298:CDS |
GTTCGCTTAATTTGCAGCTG+AGG | 0.597579 | 5.2:-14599272 | MS.gene65298:CDS |
GGGGCATGTAGGTTACGGTA+CGG | 0.599567 | 5.2:+14599529 | None:intergenic |
TGGAGATAAGGTGTTTGAGG+AGG | 0.600685 | 5.2:+14599574 | None:intergenic |
GCATGTAGGTTACGGTACGG+GGG | 0.601867 | 5.2:+14599532 | None:intergenic |
GTAACCTACATGCCCCGCCC+CGG | 0.604970 | 5.2:-14599522 | MS.gene65298:CDS |
GAAGAAAGGAGAAGTGCCAC+AGG | 0.610058 | 5.2:+14594617 | None:intergenic |
TGCATCAACAACCTCTTGGG+TGG | 0.620983 | 5.2:+14594478 | None:intergenic |
CAACAGCGCCGGTTACGAGA+GGG | 0.629447 | 5.2:+14599451 | None:intergenic |
TTCGAGAAATTCGAAGTGCA+CGG | 0.630058 | 5.2:-14599393 | MS.gene65298:CDS |
CGGTGTCGTTGAGAGTCTCA+AGG | 0.630865 | 5.2:-14599109 | MS.gene65298:intron |
ACAGGACAAAGGACCTTGGA+GGG | 0.632351 | 5.2:-14594508 | MS.gene65298:CDS |
GGCACTGGTGTCATGCCGGG+AGG | 0.634816 | 5.2:-14595561 | MS.gene65298:intron |
TATTAGGGAGAATACTGAAG+GGG | 0.638863 | 5.2:-14599163 | MS.gene65298:CDS |
ACAGCGGCAGGCATTGCTGG+AGG | 0.645225 | 5.2:-14595582 | MS.gene65298:CDS |
CACCTTGTTCAAATACAGCA+TGG | 0.646572 | 5.2:+14594693 | None:intergenic |
AAGTACAGGACAAAGGACCT+TGG | 0.646920 | 5.2:-14594512 | MS.gene65298:CDS |
TTCCTTACCAACATTTCCTG+CGG | 0.649166 | 5.2:+14594667 | None:intergenic |
TCAACAGCGCCGGTTACGAG+AGG | 0.650212 | 5.2:+14599450 | None:intergenic |
TTATTAGGGAGAATACTGAA+GGG | 0.651297 | 5.2:-14599164 | MS.gene65298:CDS |
ATATGCTGGTCTTGAACATG+AGG | 0.652648 | 5.2:-14599139 | MS.gene65298:CDS |
TGTCTTTGCAGGTAATGTTG+GGG | 0.652865 | 5.2:-14594720 | MS.gene65298:intron |
AGAGGGTAAGTACAGGACAA+AGG | 0.652879 | 5.2:-14594519 | MS.gene65298:CDS |
GAACTAACACCACCACCCAT+CGG | 0.665416 | 5.2:+14599291 | None:intergenic |
AAGATTTCCATAAAGATTGG+GGG | 0.670781 | 5.2:+14595614 | None:intergenic |
GACCATGCTGTATTTGAACA+AGG | 0.680946 | 5.2:-14594695 | MS.gene65298:CDS |
AAGATGTCTGAGCATCATTG+CGG | 0.685294 | 5.2:+14594595 | None:intergenic |
GAGGGCCGATTCCGTCGCCG+GGG | 0.686332 | 5.2:+14599469 | None:intergenic |
AGGGACAAGCACCACCCAAG+AGG | 0.691399 | 5.2:-14594489 | MS.gene65298:CDS |
AGAAAAGAAAGCCAATCCTG+TGG | 0.714161 | 5.2:-14594633 | MS.gene65298:CDS |
AAATCTTGTTGCAAATACAG+CGG | 0.734643 | 5.2:-14595598 | MS.gene65298:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTTAAATAAAAAAATT+TGG | - | chr5.2:14597166-14597185 | MS.gene65298:CDS | 0.0% |
!! | TAATTAAATATGATAAAAGT+TGG | + | chr5.2:14596301-14596320 | None:intergenic | 10.0% |
!! | TTGTAATAATGAATATAAAA+GGG | - | chr5.2:14598246-14598265 | MS.gene65298:intron | 10.0% |
!! | TTTGTAATAATGAATATAAA+AGG | - | chr5.2:14598245-14598264 | MS.gene65298:intron | 10.0% |
!!! | TTTTTTTTTGCTTATAATAT+GGG | - | chr5.2:14596516-14596535 | MS.gene65298:intron | 10.0% |
!!! | TTTTTTTTTTGCTTATAATA+TGG | - | chr5.2:14596515-14596534 | MS.gene65298:intron | 10.0% |
!! | ATATAATACATTCATTCTTA+CGG | - | chr5.2:14596133-14596152 | MS.gene65298:intron | 15.0% |
!! | ATTCTAATGAAAATATAGAT+AGG | - | chr5.2:14599191-14599210 | MS.gene65298:CDS | 15.0% |
!! | CATATAATTAGATTAAACTA+GGG | + | chr5.2:14598057-14598076 | None:intergenic | 15.0% |
!! | TCATATAATTAGATTAAACT+AGG | + | chr5.2:14598058-14598077 | None:intergenic | 15.0% |
!! | TGTAATAATGAATATAAAAG+GGG | - | chr5.2:14598247-14598266 | MS.gene65298:intron | 15.0% |
!! | TTCTAATGAAAATATAGATA+GGG | - | chr5.2:14599192-14599211 | MS.gene65298:CDS | 15.0% |
!!! | CATCATAATTTTTTTAACAT+AGG | - | chr5.2:14598029-14598048 | MS.gene65298:intron | 15.0% |
!!! | GTTTTTTTTGCTTATAATTT+AGG | + | chr5.2:14596243-14596262 | None:intergenic | 15.0% |
!!! | TATATTTCCTTTTATTACTT+TGG | - | chr5.2:14597252-14597271 | MS.gene65298:intron | 15.0% |
!!! | TATTTAATTAGGTTTTGATA+TGG | - | chr5.2:14598138-14598157 | MS.gene65298:intron | 15.0% |
!!! | TTTAATCAATCACTATATTT+TGG | + | chr5.2:14598762-14598781 | None:intergenic | 15.0% |
!! | AAGACTCAAATAATTATCTT+TGG | + | chr5.2:14597388-14597407 | None:intergenic | 20.0% |
!! | AATATTCAAATGTGATAGTT+TGG | + | chr5.2:14595107-14595126 | None:intergenic | 20.0% |
!! | GAATATACTTTGTATTTAAC+AGG | - | chr5.2:14595828-14595847 | MS.gene65298:intron | 20.0% |
!! | GTTTAATCTAATTATATGAG+AGG | - | chr5.2:14598059-14598078 | MS.gene65298:intron | 20.0% |
!! | TAATTCTCCAAAGTAATAAA+AGG | + | chr5.2:14597262-14597281 | None:intergenic | 20.0% |
!! | TATCTATACAGCAAATATAA+AGG | + | chr5.2:14596717-14596736 | None:intergenic | 20.0% |
!! | TCAATGAAAACAAAAAATAG+AGG | - | chr5.2:14598797-14598816 | MS.gene65298:intron | 20.0% |
!! | TTACAATAAACAACCTTTAA+AGG | + | chr5.2:14596635-14596654 | None:intergenic | 20.0% |
!! | TTCCTATAAAACTTATTTCA+AGG | - | chr5.2:14596435-14596454 | MS.gene65298:intron | 20.0% |
!! | TTCTTTCAATCAATTATTTC+AGG | - | chr5.2:14598709-14598728 | MS.gene65298:intron | 20.0% |
!! | TTGAAATTAAGAAAACATTG+AGG | - | chr5.2:14598300-14598319 | MS.gene65298:intron | 20.0% |
!! | TTGAAATTTGAATCATTTCA+TGG | - | chr5.2:14595620-14595639 | MS.gene65298:CDS | 20.0% |
!! | TTTCTTAACAATTTCTCTTA+TGG | + | chr5.2:14595357-14595376 | None:intergenic | 20.0% |
!!! | AATGTTTTCTTAATTTCAAG+TGG | + | chr5.2:14598299-14598318 | None:intergenic | 20.0% |
!!! | ATCCTTGAAATAAGTTTTAT+AGG | + | chr5.2:14596440-14596459 | None:intergenic | 20.0% |
!!! | ATGTTGATATTGTTGTTATT+AGG | - | chr5.2:14594875-14594894 | MS.gene65298:intron | 20.0% |
!!! | CAAAAAATTATCTTTTCCAA+AGG | - | chr5.2:14596329-14596348 | MS.gene65298:intron | 20.0% |
!!! | GTCTTTTTTGCTTATAATTT+GGG | + | chr5.2:14596279-14596298 | None:intergenic | 20.0% |
!!! | TGTTGATATTGTTGTTATTA+GGG | - | chr5.2:14594876-14594895 | MS.gene65298:intron | 20.0% |
!!! | TTAACTTTTGTCATTTGAAA+AGG | - | chr5.2:14598105-14598124 | MS.gene65298:intron | 20.0% |
!!! | TTTTTGAAAGCAAATTAAAC+AGG | - | chr5.2:14597456-14597475 | MS.gene65298:intron | 20.0% |
!!! | TTTTTGCTTATAATTTAGGA+CGG | + | chr5.2:14596239-14596258 | None:intergenic | 20.0% |
! | AAAAAGAAAATCTAGGAAGA+AGG | - | chr5.2:14597960-14597979 | MS.gene65298:intron | 25.0% |
! | AAAAATGTTTAAACAAGTGC+TGG | + | chr5.2:14597152-14597171 | None:intergenic | 25.0% |
! | AAAATCAAAAGCAAAATGAC+TGG | + | chr5.2:14598381-14598400 | None:intergenic | 25.0% |
! | AAATCAAAAGCAAAATGACT+GGG | + | chr5.2:14598380-14598399 | None:intergenic | 25.0% |
! | AACAAGATTTCCATAAAGAT+TGG | + | chr5.2:14598446-14598465 | None:intergenic | 25.0% |
! | ACAAGATTTCCATAAAGATT+GGG | + | chr5.2:14598445-14598464 | None:intergenic | 25.0% |
! | ATACACTGCTAAAATATTGA+AGG | + | chr5.2:14599014-14599033 | None:intergenic | 25.0% |
! | ATGAAAACAAAAAATAGAGG+TGG | - | chr5.2:14598800-14598819 | MS.gene65298:intron | 25.0% |
! | ATTTCATTATACTTGATTCC+AGG | + | chr5.2:14597002-14597021 | None:intergenic | 25.0% |
! | ATTTGATAAGAAAAATGCCA+CGG | + | chr5.2:14598581-14598600 | None:intergenic | 25.0% |
! | CCAAAAGTGGATAAATAATT+GGG | + | chr5.2:14597112-14597131 | None:intergenic | 25.0% |
! | GATGTAAAAACAATTTCCAT+TGG | + | chr5.2:14596415-14596434 | None:intergenic | 25.0% |
! | GTATCTAAATAACAGAAAGA+AGG | - | chr5.2:14596893-14596912 | MS.gene65298:intron | 25.0% |
! | GTTGGATGTTGTATTTAATT+AGG | - | chr5.2:14598127-14598146 | MS.gene65298:intron | 25.0% |
! | TAATCTTGATACAATCAAGA+TGG | - | chr5.2:14595134-14595153 | MS.gene65298:intron | 25.0% |
! | TTAGTAATATTTATACCTCC+CGG | + | chr5.2:14598511-14598530 | None:intergenic | 25.0% |
! | TTATTGTCGTGAGTTAATAA+GGG | + | chr5.2:14595446-14595465 | None:intergenic | 25.0% |
! | TTCCCATCTACAAATTAATT+AGG | - | chr5.2:14595915-14595934 | MS.gene65298:intron | 25.0% |
! | TTTATTGTCGTGAGTTAATA+AGG | + | chr5.2:14595447-14595466 | None:intergenic | 25.0% |
!! | AAACAATTTCCATTGGTTAT+TGG | + | chr5.2:14596408-14596427 | None:intergenic | 25.0% |
!! | ATGTATAATTTGCGTGTTTA+TGG | - | chr5.2:14595756-14595775 | MS.gene65298:intron | 25.0% |
!! | ATTAGGAGGTTTAATTTCTT+CGG | - | chr5.2:14595932-14595951 | MS.gene65298:intron | 25.0% |
!! | GTTACAGTTAAGTGATTTTT+CGG | - | chr5.2:14595492-14595511 | MS.gene65298:intron | 25.0% |
!! | TTGTTAGACATATTTTGCAT+CGG | - | chr5.2:14595877-14595896 | MS.gene65298:intron | 25.0% |
!!! | CTCCTAATTAATTTGTAGAT+GGG | + | chr5.2:14595920-14595939 | None:intergenic | 25.0% |
!!! | CTTTGCATTTAATTTTCCTT+TGG | + | chr5.2:14596348-14596367 | None:intergenic | 25.0% |
!!! | GAAGGTTGATTTTTCATTAA+TGG | + | chr5.2:14598996-14599015 | None:intergenic | 25.0% |
!!! | GGTCTTTTTTGCTTATAATT+TGG | + | chr5.2:14596280-14596299 | None:intergenic | 25.0% |
AAATCTTGTTGCAAATACAG+CGG | - | chr5.2:14598456-14598475 | MS.gene65298:intron | 30.0% | |
AAGAATAAGGTCTGTTTGAA+AGG | - | chr5.2:14594727-14594746 | MS.gene65298:intron | 30.0% | |
AAGATTTCCATAAAGATTGG+GGG | + | chr5.2:14598443-14598462 | None:intergenic | 30.0% | |
AATAGTATCTTGCTTCCATA+TGG | - | chr5.2:14598598-14598617 | MS.gene65298:intron | 30.0% | |
AATCGAGATATTCAAGCTTA+AGG | + | chr5.2:14599303-14599322 | None:intergenic | 30.0% | |
AATTTCTCTTATGGTTCTCT+AGG | + | chr5.2:14595348-14595367 | None:intergenic | 30.0% | |
AGGAAATATAAACAGACACA+TGG | + | chr5.2:14597242-14597261 | None:intergenic | 30.0% | |
ATAAACATATCAGCCAAAAG+TGG | + | chr5.2:14597125-14597144 | None:intergenic | 30.0% | |
ATTCATTTATCTTCCTCAAC+AGG | - | chr5.2:14598842-14598861 | MS.gene65298:intron | 30.0% | |
ATTTGAATCATTTCATGGCT+AGG | - | chr5.2:14595625-14595644 | MS.gene65298:intron | 30.0% | |
CAAGATTTCCATAAAGATTG+GGG | + | chr5.2:14598444-14598463 | None:intergenic | 30.0% | |
CCATCTACAAATTAATTAGG+AGG | - | chr5.2:14595918-14595937 | MS.gene65298:intron | 30.0% | |
CTGCTAATTTGAGTAATTTC+TGG | - | chr5.2:14597837-14597856 | MS.gene65298:intron | 30.0% | |
CTTTAGTTGAGTCAAATAAC+GGG | - | chr5.2:14599123-14599142 | MS.gene65298:CDS | 30.0% | |
CTTTCTTGCTAGTAATTGAT+TGG | - | chr5.2:14598347-14598366 | MS.gene65298:intron | 30.0% | |
GAATGAAACAGTATTTGTGT+AGG | - | chr5.2:14597982-14598001 | MS.gene65298:intron | 30.0% | |
GATATTCAAGCTTAAGGTTA+AGG | + | chr5.2:14599297-14599316 | None:intergenic | 30.0% | |
GCCAAAAGTGGATAAATAAT+TGG | + | chr5.2:14597113-14597132 | None:intergenic | 30.0% | |
GCTAACTAAAAGAAAAGTAG+TGG | - | chr5.2:14596192-14596211 | MS.gene65298:intron | 30.0% | |
GCTTTAGTTGAGTCAAATAA+CGG | - | chr5.2:14599122-14599141 | MS.gene65298:CDS | 30.0% | |
GGAAATATAAACAGACACAT+GGG | + | chr5.2:14597241-14597260 | None:intergenic | 30.0% | |
GGAAATTTCCAATCATCTTT+GGG | - | chr5.2:14596154-14596173 | MS.gene65298:intron | 30.0% | |
GGAATCGATTAAGAAGAATA+AGG | - | chr5.2:14594714-14594733 | MS.gene65298:intron | 30.0% | |
GGACTATTCTTTAAATGTAG+AGG | - | chr5.2:14596684-14596703 | MS.gene65298:intron | 30.0% | |
GGATAAATAATTGGGATTCA+GGG | + | chr5.2:14597104-14597123 | None:intergenic | 30.0% | |
TATTACCAGTGAATGCAATA+CGG | + | chr5.2:14596102-14596121 | None:intergenic | 30.0% | |
TCAAATTAGCAGAAACAGAA+AGG | + | chr5.2:14597829-14597848 | None:intergenic | 30.0% | |
TCATCTCACAAGAAAAAACT+TGG | - | chr5.2:14595700-14595719 | MS.gene65298:intron | 30.0% | |
TCTCAATAACCAATAACCAA+TGG | - | chr5.2:14596396-14596415 | MS.gene65298:intron | 30.0% | |
TGGATAAATAATTGGGATTC+AGG | + | chr5.2:14597105-14597124 | None:intergenic | 30.0% | |
TTATTAGGGAGAATACTGAA+GGG | - | chr5.2:14594890-14594909 | MS.gene65298:intron | 30.0% | |
TTTAGTTGAGTCAAATAACG+GGG | - | chr5.2:14599124-14599143 | MS.gene65298:CDS | 30.0% | |
! | AAGAATAGTCCTCTAAGAAA+CGG | + | chr5.2:14596675-14596694 | None:intergenic | 30.0% |
! | AATGCTATTTGGTAATATGC+GGG | - | chr5.2:14596013-14596032 | MS.gene65298:intron | 30.0% |
! | AATGGTAGTGACAACATAAT+TGG | - | chr5.2:14598913-14598932 | MS.gene65298:intron | 30.0% |
! | ATTTTGCATCGGAAATTTGT+GGG | - | chr5.2:14595888-14595907 | MS.gene65298:intron | 30.0% |
! | CCCAATTATTTATCCACTTT+TGG | - | chr5.2:14597109-14597128 | MS.gene65298:CDS | 30.0% |
! | CTAGATTTTCTTTTTGTGCA+GGG | + | chr5.2:14597955-14597974 | None:intergenic | 30.0% |
! | GAATGCTATTTGGTAATATG+CGG | - | chr5.2:14596012-14596031 | MS.gene65298:intron | 30.0% |
! | GTTTAATTTCTTCGGTGAAA+TGG | - | chr5.2:14595940-14595959 | MS.gene65298:intron | 30.0% |
! | TATTTTGCATCGGAAATTTG+TGG | - | chr5.2:14595887-14595906 | MS.gene65298:intron | 30.0% |
! | TGTATGAGATTTTCTATCGT+TGG | - | chr5.2:14597417-14597436 | MS.gene65298:intron | 30.0% |
!! | AGTATCTATTTCTGTTGAAC+TGG | + | chr5.2:14598174-14598193 | None:intergenic | 30.0% |
!! | ATTTGGTGCTATTAGTTTGT+TGG | - | chr5.2:14597183-14597202 | MS.gene65298:CDS | 30.0% |
!! | ATTTGTTATACTTCCTCAGA+GGG | + | chr5.2:14598216-14598235 | None:intergenic | 30.0% |
!! | CCTCCTAATTAATTTGTAGA+TGG | + | chr5.2:14595921-14595940 | None:intergenic | 30.0% |
!! | CTTTTGTCATTTGAAAAGGT+TGG | - | chr5.2:14598109-14598128 | MS.gene65298:intron | 30.0% |
!!! | ATGAAGGAAACTTTTTTGAG+AGG | - | chr5.2:14597527-14597546 | MS.gene65298:intron | 30.0% |
!!! | GATTTTTTTGTTCTCGAAAG+CGG | - | chr5.2:14595982-14596001 | MS.gene65298:intron | 30.0% |
AAACAGTATTTGTGTAGGAC+AGG | - | chr5.2:14597987-14598006 | MS.gene65298:intron | 35.0% | |
AACAGTATTTGTGTAGGACA+GGG | - | chr5.2:14597988-14598007 | MS.gene65298:intron | 35.0% | |
AACATTATGAAGCTTGCAGA+TGG | - | chr5.2:14596936-14596955 | MS.gene65298:intron | 35.0% | |
AAGATGTGGAAATTCGACTT+AGG | - | chr5.2:14595233-14595252 | MS.gene65298:intron | 35.0% | |
AATAAGGTCTGTTTGAAAGG+TGG | - | chr5.2:14594730-14594749 | MS.gene65298:intron | 35.0% | |
AATGTCTTTGCAGGTAATGT+TGG | - | chr5.2:14599332-14599351 | MS.gene65298:CDS | 35.0% | |
AGATATTTCCCGTTTCTTAG+AGG | - | chr5.2:14596663-14596682 | MS.gene65298:intron | 35.0% | |
AGCTTGAATATCTCGATTCA+TGG | - | chr5.2:14599305-14599324 | MS.gene65298:CDS | 35.0% | |
AGGAATGACAACATTAGAGA+GGG | - | chr5.2:14595185-14595204 | MS.gene65298:intron | 35.0% | |
AGGTGGTATAGAAATCAAAC+TGG | - | chr5.2:14598817-14598836 | MS.gene65298:intron | 35.0% | |
ATGTCTTTGCAGGTAATGTT+GGG | - | chr5.2:14599333-14599352 | MS.gene65298:CDS | 35.0% | |
ATTACCAGTGAATGCAATAC+GGG | + | chr5.2:14596101-14596120 | None:intergenic | 35.0% | |
ATTCAAGCTTAAGGTTAAGG+TGG | + | chr5.2:14599294-14599313 | None:intergenic | 35.0% | |
ATTTCCAAGTCCTTAGAAAC+TGG | - | chr5.2:14596050-14596069 | MS.gene65298:intron | 35.0% | |
CAAGAAAAAACTTGGATTGC+TGG | - | chr5.2:14595708-14595727 | MS.gene65298:intron | 35.0% | |
CATTTATCCAGTGATTTCTG+TGG | + | chr5.2:14597332-14597351 | None:intergenic | 35.0% | |
CCTAGCAAAATTTGAGTATG+AGG | + | chr5.2:14596821-14596840 | None:intergenic | 35.0% | |
CCTGCACAAAAAGAAAATCT+AGG | - | chr5.2:14597953-14597972 | MS.gene65298:intron | 35.0% | |
CGGAAATTTCCAATCATCTT+TGG | - | chr5.2:14596153-14596172 | MS.gene65298:intron | 35.0% | |
GAAAATATAGATAGGGCAGT+TGG | - | chr5.2:14599199-14599218 | MS.gene65298:CDS | 35.0% | |
GAAAGCAAATTAAACAGGAG+TGG | - | chr5.2:14597461-14597480 | MS.gene65298:intron | 35.0% | |
GAATACTTATTGGGTAGCAA+AGG | + | chr5.2:14597923-14597942 | None:intergenic | 35.0% | |
GGATAAGAGAACTTACTAGA+GGG | - | chr5.2:14595306-14595325 | MS.gene65298:intron | 35.0% | |
GTTATTAGGGAGAATACTGA+AGG | - | chr5.2:14594889-14594908 | MS.gene65298:intron | 35.0% | |
GTTTATCATCTGAGAAGCTA+AGG | + | chr5.2:14596079-14596098 | None:intergenic | 35.0% | |
TAGGAATGACAACATTAGAG+AGG | - | chr5.2:14595184-14595203 | MS.gene65298:intron | 35.0% | |
TATTAGGGAGAATACTGAAG+GGG | - | chr5.2:14594891-14594910 | MS.gene65298:intron | 35.0% | |
TCAAGTATCCCAAAGATGAT+TGG | + | chr5.2:14596165-14596184 | None:intergenic | 35.0% | |
TCTTGATACAATCAAGATGG+TGG | - | chr5.2:14595137-14595156 | MS.gene65298:intron | 35.0% | |
TGCTTATAATATGGGACAGA+GGG | - | chr5.2:14596524-14596543 | MS.gene65298:intron | 35.0% | |
TGGATAAGAGAACTTACTAG+AGG | - | chr5.2:14595305-14595324 | MS.gene65298:intron | 35.0% | |
TGGCTCGTTGAATACTTATT+GGG | + | chr5.2:14597932-14597951 | None:intergenic | 35.0% | |
TTAAACAACAGAGAAACCCA+TGG | + | chr5.2:14597295-14597314 | None:intergenic | 35.0% | |
TTCTATGAGTACTCACTCAT+TGG | - | chr5.2:14595590-14595609 | MS.gene65298:CDS | 35.0% | |
TTGCTTATAATATGGGACAG+AGG | - | chr5.2:14596523-14596542 | MS.gene65298:intron | 35.0% | |
! | AATTGCTTGTACCTTTTGCA+TGG | - | chr5.2:14595794-14595813 | MS.gene65298:intron | 35.0% |
! | AGAATAGTCCTCTAAGAAAC+GGG | + | chr5.2:14596674-14596693 | None:intergenic | 35.0% |
! | CCTAGATTTTCTTTTTGTGC+AGG | + | chr5.2:14597956-14597975 | None:intergenic | 35.0% |
! | CCTCATACTCAAATTTTGCT+AGG | - | chr5.2:14596818-14596837 | MS.gene65298:intron | 35.0% |
! | CTCTGAGGAAGTATAACAAA+TGG | - | chr5.2:14598215-14598234 | MS.gene65298:intron | 35.0% |
! | CTTTTGCATGGTAGATAACT+CGG | - | chr5.2:14595806-14595825 | MS.gene65298:intron | 35.0% |
! | GTAGAAATTGTGATAACGTG+TGG | - | chr5.2:14595560-14595579 | MS.gene65298:intron | 35.0% |
! | TGCTTATAATTTAGGACGGA+GGG | + | chr5.2:14596235-14596254 | None:intergenic | 35.0% |
! | TTGCTTATAATTTAGGACGG+AGG | + | chr5.2:14596236-14596255 | None:intergenic | 35.0% |
! | TTTCTTCGGTGAAATGGATT+CGG | - | chr5.2:14595946-14595965 | MS.gene65298:intron | 35.0% |
! | TTTTGCATCGGAAATTTGTG+GGG | - | chr5.2:14595889-14595908 | MS.gene65298:intron | 35.0% |
!! | ATCATCTTTGGGATACTTGA+TGG | - | chr5.2:14596165-14596184 | MS.gene65298:intron | 35.0% |
!! | CATTTGTTATACTTCCTCAG+AGG | + | chr5.2:14598217-14598236 | None:intergenic | 35.0% |
!! | CTATCGTTGGTTCAATCAAA+AGG | - | chr5.2:14597430-14597449 | MS.gene65298:intron | 35.0% |
!! | GTGAAACGAGTCATTTTAGA+GGG | - | chr5.2:14599518-14599537 | MS.gene65298:CDS | 35.0% |
!! | TAAACACTATTTCTGCTTGC+AGG | - | chr5.2:14598414-14598433 | MS.gene65298:intron | 35.0% |
!! | TCATTTTAGAGGGTAAGTAC+AGG | - | chr5.2:14599528-14599547 | MS.gene65298:CDS | 35.0% |
!! | TGTGAAACGAGTCATTTTAG+AGG | - | chr5.2:14599517-14599536 | MS.gene65298:CDS | 35.0% |
!!! | CTTTTTTGAGAGGATAACGA+AGG | - | chr5.2:14597537-14597556 | MS.gene65298:intron | 35.0% |
!!! | TTGCTGGCTTTTAGATGAAT+TGG | - | chr5.2:14595724-14595743 | MS.gene65298:intron | 35.0% |
AAATTCGACTTAGGCGGTTT+GGG | - | chr5.2:14595242-14595261 | MS.gene65298:intron | 40.0% | |
AAGATGTCTGAGCATCATTG+CGG | + | chr5.2:14599462-14599481 | None:intergenic | 40.0% | |
AATACTGAAGGGGAATATGC+TGG | - | chr5.2:14594901-14594920 | MS.gene65298:intron | 40.0% | |
ACAACATTAGAGAGGGAGTT+GGG | - | chr5.2:14595192-14595211 | MS.gene65298:intron | 40.0% | |
ACCATGACATCAAATTGCTC+AGG | + | chr5.2:14597062-14597081 | None:intergenic | 40.0% | |
ACCTTGACATTGTGACATGT+GGG | - | chr5.2:14596783-14596802 | MS.gene65298:intron | 40.0% | |
AGAAAAGAAAGCCAATCCTG+TGG | - | chr5.2:14599421-14599440 | MS.gene65298:CDS | 40.0% | |
ATACTTCCTCAGAGGGATAA+AGG | + | chr5.2:14598209-14598228 | None:intergenic | 40.0% | |
ATCTGGAAGGATTGACTACT+AGG | - | chr5.2:14594845-14594864 | MS.gene65298:intron | 40.0% | |
ATGTGGAAATTCGACTTAGG+CGG | - | chr5.2:14595236-14595255 | MS.gene65298:intron | 40.0% | |
ATTCTTGGAATCTTGTCGAG+AGG | - | chr5.2:14596962-14596981 | MS.gene65298:intron | 40.0% | |
CACCTTGTTCAAATACAGCA+TGG | + | chr5.2:14599364-14599383 | None:intergenic | 40.0% | |
CATGGATGAAATGTCTTTGC+AGG | - | chr5.2:14599323-14599342 | MS.gene65298:CDS | 40.0% | |
CCACTGTTGATGTCCTTTAA+AGG | - | chr5.2:14596619-14596638 | MS.gene65298:intron | 40.0% | |
CGAGTTATCTACCATGCAAA+AGG | + | chr5.2:14595808-14595827 | None:intergenic | 40.0% | |
CGGTGATAGAGAATGCTATT+TGG | - | chr5.2:14596002-14596021 | MS.gene65298:intron | 40.0% | |
CTAGCCATTTGCTTATCTCT+GGG | - | chr5.2:14597486-14597505 | MS.gene65298:intron | 40.0% | |
CTCCTTACCAAAGAATCAAC+AGG | + | chr5.2:14595283-14595302 | None:intergenic | 40.0% | |
CTTGATTCCAGGATACTTTG+TGG | + | chr5.2:14596991-14597010 | None:intergenic | 40.0% | |
GACCATGCTGTATTTGAACA+AGG | - | chr5.2:14599359-14599378 | MS.gene65298:CDS | 40.0% | |
GCTTGCAGATGGTTTATTCT+TGG | - | chr5.2:14596947-14596966 | MS.gene65298:intron | 40.0% | |
GTGGCTCGTTGAATACTTAT+TGG | + | chr5.2:14597933-14597952 | None:intergenic | 40.0% | |
TAAACCCGTATTGCATTCAC+TGG | - | chr5.2:14596094-14596113 | MS.gene65298:intron | 40.0% | |
TACTGCATCAACAACCTCTT+GGG | + | chr5.2:14599582-14599601 | None:intergenic | 40.0% | |
TAGCCATTTGCTTATCTCTG+GGG | - | chr5.2:14597487-14597506 | MS.gene65298:intron | 40.0% | |
TCATAACGACAGTGACCATA+TGG | + | chr5.2:14598616-14598635 | None:intergenic | 40.0% | |
TCCAATCGTTCAGCAAATAC+AGG | + | chr5.2:14599491-14599510 | None:intergenic | 40.0% | |
TCTGTTGAACTGGCACAATA+TGG | + | chr5.2:14598164-14598183 | None:intergenic | 40.0% | |
TGATTCTTTGGTAAGGAGAG+TGG | - | chr5.2:14595285-14595304 | MS.gene65298:intron | 40.0% | |
TGCTCTCTTTGTAGTTACTG+TGG | - | chr5.2:14597749-14597768 | MS.gene65298:intron | 40.0% | |
TGGGGGCAATAACATAATGA+AGG | - | chr5.2:14597511-14597530 | MS.gene65298:intron | 40.0% | |
TGTCGTTATGAGATGTGTGA+GGG | - | chr5.2:14598625-14598644 | MS.gene65298:intron | 40.0% | |
TGTCTTTGCAGGTAATGTTG+GGG | - | chr5.2:14599334-14599353 | MS.gene65298:CDS | 40.0% | |
TTACTGCATCAACAACCTCT+TGG | + | chr5.2:14599583-14599602 | None:intergenic | 40.0% | |
TTCCTTACCAACATTTCCTG+CGG | + | chr5.2:14599390-14599409 | None:intergenic | 40.0% | |
TTCGAGAAATTCGAAGTGCA+CGG | - | chr5.2:14594661-14594680 | MS.gene65298:CDS | 40.0% | |
! | ATCGATTCCATCACTTCAGA+TGG | + | chr5.2:14594703-14594722 | None:intergenic | 40.0% |
! | CAAGTTGACGGGATATGATT+AGG | - | chr5.2:14595165-14595184 | MS.gene65298:intron | 40.0% |
! | CCTTTAAAGGACATCAACAG+TGG | + | chr5.2:14596622-14596641 | None:intergenic | 40.0% |
! | GATTTTCTTTTTGTGCAGGG+TGG | + | chr5.2:14597952-14597971 | None:intergenic | 40.0% |
! | GCTTGTCAGTTGCTTTAATC+TGG | - | chr5.2:14594828-14594847 | MS.gene65298:intron | 40.0% |
! | GTCAGTTGCTTTAATCTGGA+AGG | - | chr5.2:14594832-14594851 | MS.gene65298:intron | 40.0% |
! | TCCTGTATTTGCTGAACGAT+TGG | - | chr5.2:14599487-14599506 | MS.gene65298:CDS | 40.0% |
! | TTCTTCGGTGAAATGGATTC+GGG | - | chr5.2:14595947-14595966 | MS.gene65298:intron | 40.0% |
! | TTGAGTCAAATAACGGGGAT+GGG | - | chr5.2:14599129-14599148 | MS.gene65298:CDS | 40.0% |
!! | ATATGCTGGTCTTGAACATG+AGG | - | chr5.2:14594915-14594934 | MS.gene65298:intron | 40.0% |
!! | ATGGTGGAAACTCAAGTTGA+CGG | - | chr5.2:14595153-14595172 | MS.gene65298:intron | 40.0% |
!! | GACCTGTTGATTCTTTGGTA+AGG | - | chr5.2:14595278-14595297 | MS.gene65298:intron | 40.0% |
!! | GAGAAGACCTGTTGATTCTT+TGG | - | chr5.2:14595273-14595292 | MS.gene65298:intron | 40.0% |
AAGTACAGGACAAAGGACCT+TGG | - | chr5.2:14599542-14599561 | MS.gene65298:CDS | 45.0% | |
ACCCACATGTCACAATGTCA+AGG | + | chr5.2:14596787-14596806 | None:intergenic | 45.0% | |
ACTTCTGCCACAGAAATCAC+TGG | - | chr5.2:14597322-14597341 | MS.gene65298:intron | 45.0% | |
AGAATTAGTGCCAACTGCCA+TGG | - | chr5.2:14597275-14597294 | MS.gene65298:intron | 45.0% | |
AGAGGGTAAGTACAGGACAA+AGG | - | chr5.2:14599535-14599554 | MS.gene65298:CDS | 45.0% | |
AGCCATTTGCTTATCTCTGG+GGG | - | chr5.2:14597488-14597507 | MS.gene65298:intron | 45.0% | |
ATGAGTACTCACTCATTGGC+TGG | - | chr5.2:14595594-14595613 | MS.gene65298:CDS | 45.0% | |
CAAATGCTGGAGAGAAGATG+TGG | - | chr5.2:14595219-14595238 | MS.gene65298:intron | 45.0% | |
CAACATTAGAGAGGGAGTTG+GGG | - | chr5.2:14595193-14595212 | MS.gene65298:intron | 45.0% | |
CACCTTGACATTGTGACATG+TGG | - | chr5.2:14596782-14596801 | MS.gene65298:intron | 45.0% | |
CAGGTTACCCCCAATCTTTA+TGG | - | chr5.2:14598433-14598452 | MS.gene65298:intron | 45.0% | |
CTATCTCCTTTATCCCTCTG+AGG | - | chr5.2:14598200-14598219 | MS.gene65298:intron | 45.0% | |
CTGTCGTTATGAGATGTGTG+AGG | - | chr5.2:14598624-14598643 | MS.gene65298:intron | 45.0% | |
CTTGAACATGAGGTTGTTCC+CGG | - | chr5.2:14594925-14594944 | MS.gene65298:intron | 45.0% | |
GAAATTCGACTTAGGCGGTT+TGG | - | chr5.2:14595241-14595260 | MS.gene65298:intron | 45.0% | |
GAATTAGTGCCAACTGCCAT+GGG | - | chr5.2:14597276-14597295 | MS.gene65298:intron | 45.0% | |
GACAACATTAGAGAGGGAGT+TGG | - | chr5.2:14595191-14595210 | MS.gene65298:intron | 45.0% | |
GACGATACATCACACATACG+AGG | - | chr5.2:14595402-14595421 | MS.gene65298:intron | 45.0% | |
GCCTGAGCAATTTGATGTCA+TGG | - | chr5.2:14597058-14597077 | MS.gene65298:CDS | 45.0% | |
GCTAGCCATTTGCTTATCTC+TGG | - | chr5.2:14597485-14597504 | MS.gene65298:intron | 45.0% | |
GCTCTCATTTGATTATGCCG+TGG | - | chr5.2:14598561-14598580 | MS.gene65298:intron | 45.0% | |
GGTCTGTTTGAAAGGTGGAT+TGG | - | chr5.2:14594735-14594754 | MS.gene65298:intron | 45.0% | |
GTCGTTATGAGATGTGTGAG+GGG | - | chr5.2:14598626-14598645 | MS.gene65298:intron | 45.0% | |
TCCAAGTCCTTAGAAACTGG+TGG | - | chr5.2:14596053-14596072 | MS.gene65298:intron | 45.0% | |
TCGAATTTCTCGAAGTGCAC+TGG | + | chr5.2:14594655-14594674 | None:intergenic | 45.0% | |
TCGTTATGAGATGTGTGAGG+GGG | - | chr5.2:14598627-14598646 | MS.gene65298:intron | 45.0% | |
TGAGCATCATTGCGGAAGAA+AGG | + | chr5.2:14599454-14599473 | None:intergenic | 45.0% | |
TGATGCCATCACTGTTTCCA+AGG | + | chr5.2:14598014-14598033 | None:intergenic | 45.0% | |
TTCCGCAGGAAATGTTGGTA+AGG | - | chr5.2:14599385-14599404 | MS.gene65298:CDS | 45.0% | |
TTCCTCAACAGGTTGCAGTA+TGG | - | chr5.2:14598853-14598872 | MS.gene65298:intron | 45.0% | |
! | AAGGTGTTTGAGGAGGTTTG+TGG | + | chr5.2:14594476-14594495 | None:intergenic | 45.0% |
! | AGCGATTCCATCTGAAGTGA+TGG | - | chr5.2:14594693-14594712 | MS.gene65298:CDS | 45.0% |
! | AGTTTTCTCGTCAGTCGTTG+AGG | - | chr5.2:14599072-14599091 | MS.gene65298:intron | 45.0% |
! | ATTTGCTTATCTCTGGGGGT+GGG | - | chr5.2:14597492-14597511 | MS.gene65298:intron | 45.0% |
! | GTTGAGTCAAATAACGGGGA+TGG | - | chr5.2:14599128-14599147 | MS.gene65298:CDS | 45.0% |
! | TGAGTACTCACTCATTGGCT+GGG | - | chr5.2:14595595-14595614 | MS.gene65298:CDS | 45.0% |
! | TGGAGATAAGGTGTTTGAGG+AGG | + | chr5.2:14594483-14594502 | None:intergenic | 45.0% |
!! | CTAGACTCAACAGTTCTGAG+TGG | + | chr5.2:14598659-14598678 | None:intergenic | 45.0% |
!! | GCTTAATTTGCAGCTGAGGA+AGG | - | chr5.2:14594786-14594805 | MS.gene65298:intron | 45.0% |
!! | GGGGTAATGGAGTTGTCAAA+TGG | - | chr5.2:14598895-14598914 | MS.gene65298:intron | 45.0% |
!! | GTTCGCTTAATTTGCAGCTG+AGG | - | chr5.2:14594782-14594801 | MS.gene65298:intron | 45.0% |
!! | TGGATTCGGGTTGCAAGTTT+AGG | - | chr5.2:14595960-14595979 | MS.gene65298:intron | 45.0% |
!! | TGGTGGAAACTCAAGTTGAC+GGG | - | chr5.2:14595154-14595173 | MS.gene65298:intron | 45.0% |
!! | TTATTAAGTTAATTAATTAA+TGG | - | chr5.2:14595033-14595052 | MS.gene65298:intron | 5.0% |
ACAGAGAAACCCATGGCAGT+TGG | + | chr5.2:14597288-14597307 | None:intergenic | 50.0% | |
ACAGGACAAAGGACCTTGGA+GGG | - | chr5.2:14599546-14599565 | MS.gene65298:CDS | 50.0% | |
ATTTGTGTAGGACAGGGCCT+TGG | - | chr5.2:14597994-14598013 | MS.gene65298:intron | 50.0% | |
CACCCCCAGAGATAAGCAAA+TGG | + | chr5.2:14597493-14597512 | None:intergenic | 50.0% | |
CATTACTTGCTCAACAGCGC+CGG | + | chr5.2:14594617-14594636 | None:intergenic | 50.0% | |
CGCAATGTAACCCTAATCCC+CGG | - | chr5.2:14594568-14594587 | MS.gene65298:CDS | 50.0% | |
CGGGGATTAGGGTTACATTG+CGG | + | chr5.2:14594570-14594589 | None:intergenic | 50.0% | |
CTCAACAGGTTGCAGTATGG+AGG | - | chr5.2:14598856-14598875 | MS.gene65298:intron | 50.0% | |
CTCCATACTGCAACCTGTTG+AGG | + | chr5.2:14598858-14598877 | None:intergenic | 50.0% | |
CTTCCACAAATTCAGCCCAC+AGG | + | chr5.2:14599239-14599258 | None:intergenic | 50.0% | |
CTTGAGACTCTCAACGACAC+CGG | + | chr5.2:14594947-14594966 | None:intergenic | 50.0% | |
CTTGTTGCAAATACAGCGGC+AGG | - | chr5.2:14598460-14598479 | MS.gene65298:intron | 50.0% | |
GAACTAACACCACCACCCAT+CGG | + | chr5.2:14594766-14594785 | None:intergenic | 50.0% | |
GAGAACTTACTAGAGGGCAG+AGG | - | chr5.2:14595312-14595331 | MS.gene65298:intron | 50.0% | |
GATTAGGGTTACATTGCGGG+GGG | + | chr5.2:14594566-14594585 | None:intergenic | 50.0% | |
GCTAAGGCCACCAGTTTCTA+AGG | + | chr5.2:14596063-14596082 | None:intergenic | 50.0% | |
GGATTAGGGTTACATTGCGG+GGG | + | chr5.2:14594567-14594586 | None:intergenic | 50.0% | |
GGGATTAGGGTTACATTGCG+GGG | + | chr5.2:14594568-14594587 | None:intergenic | 50.0% | |
GGGGATTAGGGTTACATTGC+GGG | + | chr5.2:14594569-14594588 | None:intergenic | 50.0% | |
GTCCTTTGTGTTGGACCTGT+GGG | - | chr5.2:14599221-14599240 | MS.gene65298:CDS | 50.0% | |
TACAGGACAAAGGACCTTGG+AGG | - | chr5.2:14599545-14599564 | MS.gene65298:CDS | 50.0% | |
TCAAGTGGCACCAAGAGAAC+AGG | + | chr5.2:14598284-14598303 | None:intergenic | 50.0% | |
TGCATCAACAACCTCTTGGG+TGG | + | chr5.2:14599579-14599598 | None:intergenic | 50.0% | |
TTGAGACTCTCAACGACACC+GGG | + | chr5.2:14594946-14594965 | None:intergenic | 50.0% | |
! | CATTTGCTTATCTCTGGGGG+TGG | - | chr5.2:14597491-14597510 | MS.gene65298:intron | 50.0% |
! | CTGTGGGCTGAATTTGTGGA+AGG | - | chr5.2:14599237-14599256 | MS.gene65298:CDS | 50.0% |
! | GAGGTTGCCACAAAGTATCC+TGG | - | chr5.2:14596981-14597000 | MS.gene65298:intron | 50.0% |
! | GCCACCAGTTTCTAAGGACT+TGG | + | chr5.2:14596057-14596076 | None:intergenic | 50.0% |
! | GCGTGGAGATAAGGTGTTTG+AGG | + | chr5.2:14594486-14594505 | None:intergenic | 50.0% |
! | GTCAAATAACGGGGATGGGT+TGG | - | chr5.2:14599133-14599152 | MS.gene65298:CDS | 50.0% |
! | TTTGAACAAGGTGCTTCCGC+AGG | - | chr5.2:14599371-14599390 | MS.gene65298:CDS | 50.0% |
! | TTTGCTTATCTCTGGGGGTG+GGG | - | chr5.2:14597493-14597512 | MS.gene65298:intron | 50.0% |
!! | AAGGAGAAGTGCCACAGGAT+TGG | + | chr5.2:14599435-14599454 | None:intergenic | 50.0% |
!! | GAAGAAAGGAGAAGTGCCAC+AGG | + | chr5.2:14599440-14599459 | None:intergenic | 50.0% |
ACCAAGAGAACAGGCGGGAA+GGG | + | chr5.2:14598275-14598294 | None:intergenic | 55.0% | |
AGCCCACAGGTCCAACACAA+AGG | + | chr5.2:14599226-14599245 | None:intergenic | 55.0% | |
AGGCAACAGCAGCTGTTGTG+GGG | - | chr5.2:14598876-14598895 | MS.gene65298:intron | 55.0% | |
AGTGGCACCAAGAGAACAGG+CGG | + | chr5.2:14598281-14598300 | None:intergenic | 55.0% | |
CAGCAGCTGTTGTGGGGTAA+TGG | - | chr5.2:14598882-14598901 | MS.gene65298:intron | 55.0% | |
CAGGGCCTTGGAAACAGTGA+TGG | - | chr5.2:14598006-14598025 | MS.gene65298:intron | 55.0% | |
CGGCGCTGTTGAGCAAGTAA+TGG | - | chr5.2:14594615-14594634 | MS.gene65298:CDS | 55.0% | |
GAGGCAACAGCAGCTGTTGT+GGG | - | chr5.2:14598875-14598894 | MS.gene65298:intron | 55.0% | |
GCATGTAGGTTACGGTACGG+GGG | + | chr5.2:14594525-14594544 | None:intergenic | 55.0% | |
GGAGTTGGGGTAGCAAATGC+TGG | - | chr5.2:14595206-14595225 | MS.gene65298:intron | 55.0% | |
GGCATGTAGGTTACGGTACG+GGG | + | chr5.2:14594526-14594545 | None:intergenic | 55.0% | |
GGGCAGTTGGTCCTTTGTGT+TGG | - | chr5.2:14599212-14599231 | MS.gene65298:CDS | 55.0% | |
GGGCATGTAGGTTACGGTAC+GGG | + | chr5.2:14594527-14594546 | None:intergenic | 55.0% | |
GGGGCATGTAGGTTACGGTA+CGG | + | chr5.2:14594528-14594547 | None:intergenic | 55.0% | |
GGTCCTTTGTGTTGGACCTG+TGG | - | chr5.2:14599220-14599239 | MS.gene65298:CDS | 55.0% | |
GGTGCTTCCGCAGGAAATGT+TGG | - | chr5.2:14599380-14599399 | MS.gene65298:CDS | 55.0% | |
TTACTAGAGGGCAGAGGCAG+AGG | - | chr5.2:14595318-14595337 | MS.gene65298:intron | 55.0% | |
! | AATACAGCGGCAGGCATTGC+TGG | - | chr5.2:14598469-14598488 | MS.gene65298:intron | 55.0% |
! | GGACCTGTGGGCTGAATTTG+TGG | - | chr5.2:14599233-14599252 | MS.gene65298:CDS | 55.0% |
! | TTGCTTATCTCTGGGGGTGG+GGG | - | chr5.2:14597494-14597513 | MS.gene65298:intron | 55.0% |
!! | CGGCAGTGCTGTTTGTAGGA+TGG | - | chr5.2:14599166-14599185 | MS.gene65298:CDS | 55.0% |
!! | CGGTGTCGTTGAGAGTCTCA+AGG | - | chr5.2:14594945-14594964 | MS.gene65298:intron | 55.0% |
ACCCTTCCCGCCTGTTCTCT+TGG | - | chr5.2:14598271-14598290 | MS.gene65298:intron | 60.0% | |
AGGGACAAGCACCACCCAAG+AGG | - | chr5.2:14599565-14599584 | MS.gene65298:CDS | 60.0% | |
CACCAAGAGAACAGGCGGGA+AGG | + | chr5.2:14598276-14598295 | None:intergenic | 60.0% | |
CTAATCCCCGGCGACGGAAT+CGG | - | chr5.2:14594580-14594599 | MS.gene65298:CDS | 60.0% | |
GATTCCGTCGCCGGGGATTA+GGG | + | chr5.2:14594581-14594600 | None:intergenic | 60.0% | |
GGAATCGGCCCTCTCGTAAC+CGG | - | chr5.2:14594595-14594614 | MS.gene65298:CDS | 60.0% | |
GGAGGCAACAGCAGCTGTTG+TGG | - | chr5.2:14598874-14598893 | MS.gene65298:intron | 60.0% | |
GTAACCCTAATCCCCGGCGA+CGG | - | chr5.2:14594574-14594593 | MS.gene65298:CDS | 60.0% | |
GTAGGTTACGGTACGGGGGT+GGG | + | chr5.2:14594521-14594540 | None:intergenic | 60.0% | |
GTGGCACCAAGAGAACAGGC+GGG | + | chr5.2:14598280-14598299 | None:intergenic | 60.0% | |
TGTAGGTTACGGTACGGGGG+TGG | + | chr5.2:14594522-14594541 | None:intergenic | 60.0% | |
!! | AACGGGGATGGGTTGGAGTC+TGG | - | chr5.2:14599140-14599159 | MS.gene65298:CDS | 60.0% |
!! | AGGTGGATTGGCGACTCCGA+TGG | - | chr5.2:14594747-14594766 | MS.gene65298:intron | 60.0% |
!! | CAACAGCGCCGGTTACGAGA+GGG | + | chr5.2:14594606-14594625 | None:intergenic | 60.0% |
!! | GATGGGTTGGAGTCTGGTGG+CGG | - | chr5.2:14599146-14599165 | MS.gene65298:CDS | 60.0% |
!! | GGTGGATTGGCGACTCCGAT+GGG | - | chr5.2:14594748-14594767 | MS.gene65298:intron | 60.0% |
!! | GTGGCGGCAGTGCTGTTTGT+AGG | - | chr5.2:14599162-14599181 | MS.gene65298:CDS | 60.0% |
!! | TCAACAGCGCCGGTTACGAG+AGG | + | chr5.2:14594607-14594626 | None:intergenic | 60.0% |
!! | TGGAGGCACTGGTGTCATGC+CGG | - | chr5.2:14598489-14598508 | MS.gene65298:intron | 60.0% |
ATTGCGGGGGGTTCCGTCTC+CGG | + | chr5.2:14594554-14594573 | None:intergenic | 65.0% | |
CGATTCCGTCGCCGGGGATT+AGG | + | chr5.2:14594582-14594601 | None:intergenic | 65.0% | |
GGGGCGGGGCATGTAGGTTA+CGG | + | chr5.2:14594533-14594552 | None:intergenic | 65.0% | |
GGGTGGTGCTTGTCCCTCCA+AGG | + | chr5.2:14599562-14599581 | None:intergenic | 65.0% | |
GTAACCTACATGCCCCGCCC+CGG | - | chr5.2:14594532-14594551 | MS.gene65298:CDS | 65.0% | |
TTACGGTACGGGGGTGGGTG+AGG | + | chr5.2:14594516-14594535 | None:intergenic | 65.0% | |
TTGGCGACTCCGATGGGTGG+TGG | - | chr5.2:14594754-14594773 | MS.gene65298:intron | 65.0% | |
! | ACAGCGGCAGGCATTGCTGG+AGG | - | chr5.2:14598472-14598491 | MS.gene65298:intron | 65.0% |
! | GCAGGCATTGCTGGAGGCAC+TGG | - | chr5.2:14598478-14598497 | MS.gene65298:intron | 65.0% |
! | GGATTGGCGACTCCGATGGG+TGG | - | chr5.2:14594751-14594770 | MS.gene65298:intron | 65.0% |
! | GGTGGTGGCGCGTGGAGATA+AGG | + | chr5.2:14594495-14594514 | None:intergenic | 65.0% |
!! | GGAGGCACTGGTGTCATGCC+GGG | - | chr5.2:14598490-14598509 | MS.gene65298:intron | 65.0% |
!! | GGGGATGGGTTGGAGTCTGG+TGG | - | chr5.2:14599143-14599162 | MS.gene65298:CDS | 65.0% |
TACATGCCCCGCCCCGGAGA+CGG | - | chr5.2:14594538-14594557 | MS.gene65298:CDS | 70.0% | |
TACGGGGGTGGGTGAGGTGG+TGG | + | chr5.2:14594510-14594529 | None:intergenic | 70.0% | |
TTGCGGGGGGTTCCGTCTCC+GGG | + | chr5.2:14594553-14594572 | None:intergenic | 70.0% | |
! | AGAGGGCCGATTCCGTCGCC+GGG | + | chr5.2:14594589-14594608 | None:intergenic | 70.0% |
! | GAGAGGGCCGATTCCGTCGC+CGG | + | chr5.2:14594590-14594609 | None:intergenic | 70.0% |
!! | GGCACTGGTGTCATGCCGGG+AGG | - | chr5.2:14598493-14598512 | MS.gene65298:intron | 70.0% |
CGGTACGGGGGTGGGTGAGG+TGG | + | chr5.2:14594513-14594532 | None:intergenic | 75.0% | |
GTCTCCGGGGCGGGGCATGT+AGG | + | chr5.2:14594539-14594558 | None:intergenic | 75.0% | |
TGCGGGGGGTTCCGTCTCCG+GGG | + | chr5.2:14594552-14594571 | None:intergenic | 75.0% | |
! | GAGGGCCGATTCCGTCGCCG+GGG | + | chr5.2:14594588-14594607 | None:intergenic | 75.0% |
! | GTGGGTGAGGTGGTGGCGCG+TGG | + | chr5.2:14594503-14594522 | None:intergenic | 75.0% |
! | GGGGGGTTCCGTCTCCGGGG+CGG | + | chr5.2:14594549-14594568 | None:intergenic | 80.0% |
! | GGGGGTTCCGTCTCCGGGGC+GGG | + | chr5.2:14594548-14594567 | None:intergenic | 80.0% |
! | GGGGTTCCGTCTCCGGGGCG+GGG | + | chr5.2:14594547-14594566 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 14594457 | 14599619 | 14594457 | ID=MS.gene65298 |
chr5.2 | mRNA | 14594457 | 14599619 | 14594457 | ID=MS.gene65298.t1;Parent=MS.gene65298 |
chr5.2 | exon | 14599110 | 14599619 | 14599110 | ID=MS.gene65298.t1.exon1;Parent=MS.gene65298.t1 |
chr5.2 | CDS | 14599110 | 14599619 | 14599110 | ID=cds.MS.gene65298.t1;Parent=MS.gene65298.t1 |
chr5.2 | exon | 14596997 | 14597236 | 14596997 | ID=MS.gene65298.t1.exon2;Parent=MS.gene65298.t1 |
chr5.2 | CDS | 14596997 | 14597236 | 14596997 | ID=cds.MS.gene65298.t1;Parent=MS.gene65298.t1 |
chr5.2 | exon | 14595562 | 14595640 | 14595562 | ID=MS.gene65298.t1.exon3;Parent=MS.gene65298.t1 |
chr5.2 | CDS | 14595562 | 14595640 | 14595562 | ID=cds.MS.gene65298.t1;Parent=MS.gene65298.t1 |
chr5.2 | exon | 14594457 | 14594731 | 14594457 | ID=MS.gene65298.t1.exon4;Parent=MS.gene65298.t1 |
chr5.2 | CDS | 14594457 | 14594731 | 14594457 | ID=cds.MS.gene65298.t1;Parent=MS.gene65298.t1 |
Gene Sequence |
Protein sequence |