Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68356.t1 | XP_003612317.1 | 98.6 | 367 | 5 | 0 | 1 | 367 | 1 | 367 | 6.10E-201 | 709.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68356.t1 | P93032 | 82.6 | 362 | 62 | 1 | 3 | 363 | 2 | 363 | 1.1e-166 | 587.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68356.t1 | G7K008 | 98.6 | 367 | 5 | 0 | 1 | 367 | 1 | 367 | 4.4e-201 | 709.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene64856 | MS.gene68356 | PPI |
MS.gene017544 | MS.gene68356 | PPI |
MS.gene68356 | MS.gene064489 | PPI |
MS.gene68356 | MS.gene24619 | PPI |
MS.gene68356 | MS.gene029815 | PPI |
MS.gene85935 | MS.gene68356 | PPI |
MS.gene38729 | MS.gene68356 | PPI |
MS.gene055904 | MS.gene68356 | PPI |
MS.gene68356 | MS.gene67551 | PPI |
MS.gene68356 | MS.gene83571 | PPI |
MS.gene27219 | MS.gene68356 | PPI |
MS.gene037818 | MS.gene68356 | PPI |
MS.gene86974 | MS.gene68356 | PPI |
MS.gene68356 | MS.gene012996 | PPI |
MS.gene68356 | MS.gene054629 | PPI |
MS.gene68356 | MS.gene067451 | PPI |
MS.gene65298 | MS.gene68356 | PPI |
MS.gene23789 | MS.gene68356 | PPI |
MS.gene68356 | MS.gene48488 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68356.t1 | MTR_5g023740 | 98.638 | 367 | 5 | 0 | 1 | 367 | 1 | 367 | 0.0 | 743 |
MS.gene68356.t1 | MTR_5g023740 | 97.548 | 367 | 5 | 1 | 1 | 367 | 1 | 363 | 0.0 | 729 |
MS.gene68356.t1 | MTR_8g074030 | 88.441 | 372 | 37 | 2 | 1 | 367 | 1 | 371 | 0.0 | 673 |
MS.gene68356.t1 | MTR_8g074030 | 87.366 | 372 | 37 | 3 | 1 | 367 | 1 | 367 | 0.0 | 660 |
MS.gene68356.t1 | MTR_5g023740 | 98.195 | 277 | 5 | 0 | 1 | 277 | 1 | 277 | 0.0 | 563 |
MS.gene68356.t1 | MTR_5g023740 | 98.195 | 277 | 5 | 0 | 1 | 277 | 1 | 277 | 0.0 | 562 |
MS.gene68356.t1 | MTR_5g023740 | 96.751 | 277 | 5 | 1 | 1 | 277 | 1 | 273 | 0.0 | 551 |
MS.gene68356.t1 | MTR_1g064070 | 48.634 | 366 | 174 | 5 | 6 | 366 | 2 | 358 | 1.03e-118 | 348 |
MS.gene68356.t1 | MTR_3g101470 | 48.732 | 355 | 169 | 3 | 17 | 366 | 7 | 353 | 1.35e-116 | 342 |
MS.gene68356.t1 | MTR_2g104610 | 29.132 | 357 | 197 | 15 | 32 | 349 | 35 | 374 | 7.26e-28 | 113 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68356.t1 | AT4G35260 | 84.973 | 366 | 54 | 1 | 3 | 367 | 2 | 367 | 0.0 | 637 |
MS.gene68356.t1 | AT4G35650 | 81.421 | 366 | 66 | 1 | 4 | 367 | 3 | 368 | 0.0 | 627 |
MS.gene68356.t1 | AT2G17130 | 81.967 | 366 | 65 | 1 | 3 | 367 | 2 | 367 | 0.0 | 617 |
MS.gene68356.t1 | AT2G17130 | 80.874 | 366 | 65 | 2 | 3 | 367 | 2 | 363 | 0.0 | 605 |
MS.gene68356.t1 | AT5G03290 | 51.190 | 336 | 156 | 2 | 36 | 366 | 42 | 374 | 1.75e-117 | 345 |
MS.gene68356.t1 | AT3G09810 | 51.190 | 336 | 156 | 4 | 36 | 366 | 42 | 374 | 8.08e-113 | 333 |
MS.gene68356.t1 | AT1G32480 | 62.500 | 224 | 69 | 5 | 37 | 257 | 2 | 213 | 1.16e-90 | 271 |
MS.gene68356.t1 | AT1G80560 | 29.630 | 351 | 197 | 13 | 40 | 354 | 45 | 381 | 1.48e-30 | 120 |
MS.gene68356.t1 | AT5G14200 | 28.792 | 389 | 224 | 16 | 1 | 349 | 5 | 380 | 1.59e-30 | 120 |
MS.gene68356.t1 | AT5G14200 | 28.792 | 389 | 224 | 16 | 1 | 349 | 5 | 380 | 1.63e-30 | 120 |
MS.gene68356.t1 | AT1G31180 | 28.974 | 390 | 223 | 16 | 1 | 349 | 1 | 377 | 2.74e-30 | 120 |
MS.gene68356.t1 | AT1G31180 | 28.974 | 390 | 223 | 16 | 1 | 349 | 16 | 392 | 4.45e-30 | 119 |
MS.gene68356.t1 | AT5G14200 | 26.596 | 282 | 165 | 10 | 1 | 246 | 5 | 280 | 3.38e-13 | 70.1 |
Find 107 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGATTCCGTCGCCGGGGATT+AGG | 0.169058 | 5.1:+14426148 | None:intergenic |
ATGTTGATATTGTTGTTATT+AGG | 0.236899 | 5.1:-14425852 | MS.gene68356:CDS |
GGGGATTAGGGTTACATTGC+GGG | 0.275523 | 5.1:+14426161 | None:intergenic |
TGTTGATATTGTTGTTATTA+GGG | 0.290952 | 5.1:-14425851 | MS.gene68356:CDS |
GCTTGCAGATGGTTTATTCT+TGG | 0.304514 | 5.1:-14423780 | MS.gene68356:CDS |
GATTCCGTCGCCGGGGATTA+GGG | 0.344303 | 5.1:+14426149 | None:intergenic |
GTGGGTGAGGTGGTGGCGCG+TGG | 0.349708 | 5.1:+14426227 | None:intergenic |
AACAAGATTTCCATAAAGAT+TGG | 0.353298 | 5.1:+14422283 | None:intergenic |
CTTGAACATGAGGTTGTTCC+CGG | 0.354977 | 5.1:-14425802 | MS.gene68356:CDS |
GCTTGTCAGTTGCTTTAATC+TGG | 0.358844 | 5.1:-14425899 | MS.gene68356:CDS |
AATACAGCGGCAGGCATTGC+TGG | 0.369556 | 5.1:-14422257 | MS.gene68356:CDS |
ATTTCATTATACTTGATTCC+AGG | 0.392374 | 5.1:+14423728 | None:intergenic |
ATCTGGAAGGATTGACTACT+AGG | 0.394728 | 5.1:-14425882 | MS.gene68356:CDS |
ACAAGATTTCCATAAAGATT+GGG | 0.395363 | 5.1:+14422284 | None:intergenic |
GGAATCGATTAAGAAGAATA+AGG | 0.408209 | 5.1:-14426013 | MS.gene68356:CDS |
GGGGTTCCGTCTCCGGGGCG+GGG | 0.409508 | 5.1:+14426183 | None:intergenic |
GGCATGTAGGTTACGGTACG+GGG | 0.414877 | 5.1:+14426204 | None:intergenic |
TCCAATCGTTCAGCAAATAC+AGG | 0.416645 | 5.1:+14421238 | None:intergenic |
GGGATTAGGGTTACATTGCG+GGG | 0.421936 | 5.1:+14426162 | None:intergenic |
ATGTCTTTGCAGGTAATGTT+GGG | 0.422079 | 5.1:-14421393 | MS.gene68356:intron |
GGAATCGGCCCTCTCGTAAC+CGG | 0.429953 | 5.1:-14426132 | MS.gene68356:CDS |
GGGCATGTAGGTTACGGTAC+GGG | 0.430343 | 5.1:+14426203 | None:intergenic |
CTTGATTCCAGGATACTTTG+TGG | 0.435276 | 5.1:+14423739 | None:intergenic |
TCCTGTATTTGCTGAACGAT+TGG | 0.436123 | 5.1:-14421239 | MS.gene68356:CDS |
GCAGGCATTGCTGGAGGCAC+TGG | 0.441704 | 5.1:-14422248 | MS.gene68356:CDS |
CTAATCCCCGGCGACGGAAT+CGG | 0.445934 | 5.1:-14426147 | MS.gene68356:CDS |
CGGGGATTAGGGTTACATTG+CGG | 0.449437 | 5.1:+14426160 | None:intergenic |
AAGAATAAGGTCTGTTTGAA+AGG | 0.455164 | 5.1:-14426000 | MS.gene68356:CDS |
GTCTCCGGGGCGGGGCATGT+AGG | 0.455315 | 5.1:+14426191 | None:intergenic |
TCGAATTTCTCGAAGTGCAC+TGG | 0.458066 | 5.1:+14426075 | None:intergenic |
GGAGGCACTGGTGTCATGCC+GGG | 0.461037 | 5.1:-14422236 | MS.gene68356:CDS |
TACTGCATCAACAACCTCTT+GGG | 0.461914 | 5.1:+14421147 | None:intergenic |
GGGTGGTGCTTGTCCCTCCA+AGG | 0.470554 | 5.1:+14421167 | None:intergenic |
ATCGATTCCATCACTTCAGA+TGG | 0.475497 | 5.1:+14426027 | None:intergenic |
TTACTGCATCAACAACCTCT+TGG | 0.475996 | 5.1:+14421146 | None:intergenic |
AGAGGGCCGATTCCGTCGCC+GGG | 0.478788 | 5.1:+14426141 | None:intergenic |
GCCTGAGCAATTTGATGTCA+TGG | 0.486144 | 5.1:-14423669 | MS.gene68356:intron |
CTTGTTGCAAATACAGCGGC+AGG | 0.486316 | 5.1:-14422266 | MS.gene68356:CDS |
AAGGAGAAGTGCCACAGGAT+TGG | 0.491158 | 5.1:+14421294 | None:intergenic |
AAGGTGTTTGAGGAGGTTTG+TGG | 0.493042 | 5.1:+14426254 | None:intergenic |
GAGAGGGCCGATTCCGTCGC+CGG | 0.493954 | 5.1:+14426140 | None:intergenic |
GGATTAGGGTTACATTGCGG+GGG | 0.495232 | 5.1:+14426163 | None:intergenic |
GTCAGTTGCTTTAATCTGGA+AGG | 0.496580 | 5.1:-14425895 | MS.gene68356:CDS |
CGGCGCTGTTGAACAAGTAA+TGG | 0.501927 | 5.1:-14426112 | MS.gene68356:CDS |
TGGAGGCACTGGTGTCATGC+CGG | 0.510683 | 5.1:-14422237 | MS.gene68356:CDS |
TTGGCGACTCCGATGGGTGG+TGG | 0.513125 | 5.1:-14425973 | MS.gene68356:CDS |
GAGGTTGCCACAAAGTATCC+TGG | 0.516332 | 5.1:-14423746 | MS.gene68356:CDS |
AATAAGGTCTGTTTGAAAGG+TGG | 0.522695 | 5.1:-14425997 | MS.gene68356:CDS |
GCGTGGAGATAAGGTGTTTG+AGG | 0.525687 | 5.1:+14426244 | None:intergenic |
AATGTCTTTGCAGGTAATGT+TGG | 0.527179 | 5.1:-14421394 | MS.gene68356:intron |
CAAGATTTCCATAAAGATTG+GGG | 0.528612 | 5.1:+14422285 | None:intergenic |
GCTTAATTTGCAGCTGAGGA+AGG | 0.528655 | 5.1:-14425941 | MS.gene68356:CDS |
TGAGCATCATTGCGGAAGAA+AGG | 0.530564 | 5.1:+14421275 | None:intergenic |
GGGGCGGGGCATGTAGGTTA+CGG | 0.533314 | 5.1:+14426197 | None:intergenic |
TACATGCCCCGCCCCGGAGA+CGG | 0.536211 | 5.1:-14426189 | MS.gene68356:CDS |
TTTGAACAAGGTGCTTCCGC+AGG | 0.536373 | 5.1:-14421355 | MS.gene68356:CDS |
GTTATTAGGGAGAATACTGA+AGG | 0.537381 | 5.1:-14425838 | MS.gene68356:CDS |
GGTGGTGGCGCGTGGAGATA+AGG | 0.541475 | 5.1:+14426235 | None:intergenic |
CATTACTTGTTCAACAGCGC+CGG | 0.543378 | 5.1:+14426113 | None:intergenic |
GGTGGATTGGCGACTCCGAT+GGG | 0.544930 | 5.1:-14425979 | MS.gene68356:CDS |
TTGAGACTCTCAACGACACC+GGG | 0.546059 | 5.1:+14425784 | None:intergenic |
GGTCTGTTTGAAAGGTGGAT+TGG | 0.550611 | 5.1:-14425992 | MS.gene68356:CDS |
AGCGATTCCATCTGAAGTGA+TGG | 0.550636 | 5.1:-14426034 | MS.gene68356:CDS |
AGGTGGATTGGCGACTCCGA+TGG | 0.556949 | 5.1:-14425980 | MS.gene68356:CDS |
AACATTATGAAGCTTGCAGA+TGG | 0.557251 | 5.1:-14423791 | MS.gene68356:CDS |
ACCATGACATCAAATTGCTC+AGG | 0.558319 | 5.1:+14423668 | None:intergenic |
GGTGCTTCCGCAGGAAATGT+TGG | 0.560130 | 5.1:-14421346 | MS.gene68356:CDS |
GATTAGGGTTACATTGCGGG+GGG | 0.563580 | 5.1:+14426164 | None:intergenic |
CGCAATGTAACCCTAATCCC+CGG | 0.573917 | 5.1:-14426159 | MS.gene68356:CDS |
TTCCGCAGGAAATGTTGGTA+AGG | 0.574592 | 5.1:-14421341 | MS.gene68356:CDS |
AATACTGAAGGGGAATATGC+TGG | 0.581107 | 5.1:-14425826 | MS.gene68356:CDS |
CTTGAGACTCTCAACGACAC+CGG | 0.585873 | 5.1:+14425783 | None:intergenic |
ATTCTTGGAATCTTGTCGAG+AGG | 0.590626 | 5.1:-14423765 | MS.gene68356:CDS |
GGATTGGCGACTCCGATGGG+TGG | 0.593367 | 5.1:-14425976 | MS.gene68356:CDS |
GTAACCCTAATCCCCGGCGA+CGG | 0.593645 | 5.1:-14426153 | MS.gene68356:CDS |
TACAGGACAAAGGACCTTGG+AGG | 0.595343 | 5.1:-14421181 | MS.gene68356:CDS |
GTATCTAAATAACAGAAAGA+AGG | 0.597022 | 5.1:-14423834 | MS.gene68356:CDS |
GTTCGCTTAATTTGCAGCTG+AGG | 0.597579 | 5.1:-14425945 | MS.gene68356:CDS |
GGGGCATGTAGGTTACGGTA+CGG | 0.599567 | 5.1:+14426202 | None:intergenic |
TGGAGATAAGGTGTTTGAGG+AGG | 0.600685 | 5.1:+14426247 | None:intergenic |
GCATGTAGGTTACGGTACGG+GGG | 0.601867 | 5.1:+14426205 | None:intergenic |
GTAACCTACATGCCCCGCCC+CGG | 0.604970 | 5.1:-14426195 | MS.gene68356:CDS |
GAAGAAAGGAGAAGTGCCAC+AGG | 0.610058 | 5.1:+14421289 | None:intergenic |
TGCATCAACAACCTCTTGGG+TGG | 0.620983 | 5.1:+14421150 | None:intergenic |
TCAACAGCGCCGGTTACGAG+AGG | 0.623169 | 5.1:+14426123 | None:intergenic |
CAACAGCGCCGGTTACGAGA+GGG | 0.629447 | 5.1:+14426124 | None:intergenic |
TTCGAGAAATTCGAAGTGCA+CGG | 0.630058 | 5.1:-14426066 | MS.gene68356:CDS |
CGGTGTCGTTGAGAGTCTCA+AGG | 0.630865 | 5.1:-14425782 | MS.gene68356:intron |
ACAGGACAAAGGACCTTGGA+GGG | 0.632351 | 5.1:-14421180 | MS.gene68356:CDS |
GGCACTGGTGTCATGCCGGG+AGG | 0.634816 | 5.1:-14422233 | MS.gene68356:intron |
TATTAGGGAGAATACTGAAG+GGG | 0.638863 | 5.1:-14425836 | MS.gene68356:CDS |
ACAGCGGCAGGCATTGCTGG+AGG | 0.645225 | 5.1:-14422254 | MS.gene68356:CDS |
CACCTTGTTCAAATACAGCA+TGG | 0.646572 | 5.1:+14421365 | None:intergenic |
AAGTACAGGACAAAGGACCT+TGG | 0.646920 | 5.1:-14421184 | MS.gene68356:CDS |
TTCCTTACCAACATTTCCTG+CGG | 0.649166 | 5.1:+14421339 | None:intergenic |
TTATTAGGGAGAATACTGAA+GGG | 0.651297 | 5.1:-14425837 | MS.gene68356:CDS |
ATATGCTGGTCTTGAACATG+AGG | 0.652648 | 5.1:-14425812 | MS.gene68356:CDS |
TGTCTTTGCAGGTAATGTTG+GGG | 0.652865 | 5.1:-14421392 | MS.gene68356:intron |
AGAGGGTAAGTACAGGACAA+AGG | 0.652879 | 5.1:-14421191 | MS.gene68356:CDS |
GAACTAACACCACCACCCAT+CGG | 0.665416 | 5.1:+14425964 | None:intergenic |
AAGATTTCCATAAAGATTGG+GGG | 0.670781 | 5.1:+14422286 | None:intergenic |
GACCATGCTGTATTTGAACA+AGG | 0.680946 | 5.1:-14421367 | MS.gene68356:CDS |
AAGATGTCTGAGCATCATTG+CGG | 0.685294 | 5.1:+14421267 | None:intergenic |
GAGGGCCGATTCCGTCGCCG+GGG | 0.686332 | 5.1:+14426142 | None:intergenic |
AGGGACAAGCACCACCCAAG+AGG | 0.691399 | 5.1:-14421161 | MS.gene68356:CDS |
AGAAAAGAAAGCCAATCCTG+TGG | 0.714161 | 5.1:-14421305 | MS.gene68356:CDS |
AAATCTTGTTGCAAATACAG+CGG | 0.734643 | 5.1:-14422270 | MS.gene68356:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTAAATAAAAAAATT+TGG | - | chr5.1:14423839-14423858 | MS.gene68356:CDS | 0.0% |
!! | TAATTAAATATGATAAAAGT+TGG | + | chr5.1:14422973-14422992 | None:intergenic | 10.0% |
!! | TTGTAATAATGAATATAAAA+GGG | - | chr5.1:14424919-14424938 | MS.gene68356:intron | 10.0% |
!! | TTTGTAATAATGAATATAAA+AGG | - | chr5.1:14424918-14424937 | MS.gene68356:intron | 10.0% |
!!! | TTTTTTTTTGCTTATAATAT+GGG | - | chr5.1:14423188-14423207 | MS.gene68356:intron | 10.0% |
!!! | TTTTTTTTTTGCTTATAATA+TGG | - | chr5.1:14423187-14423206 | MS.gene68356:intron | 10.0% |
!! | ATATAATACATTCATTCTTA+CGG | - | chr5.1:14422805-14422824 | MS.gene68356:intron | 15.0% |
!! | ATTCTAATGAAAATATAGAT+AGG | - | chr5.1:14425864-14425883 | MS.gene68356:CDS | 15.0% |
!! | CATATAATTAGATTAAACTA+GGG | + | chr5.1:14424730-14424749 | None:intergenic | 15.0% |
!! | TCATATAATTAGATTAAACT+AGG | + | chr5.1:14424731-14424750 | None:intergenic | 15.0% |
!! | TGTAATAATGAATATAAAAG+GGG | - | chr5.1:14424920-14424939 | MS.gene68356:intron | 15.0% |
!! | TTCTAATGAAAATATAGATA+GGG | - | chr5.1:14425865-14425884 | MS.gene68356:CDS | 15.0% |
!!! | CATCATAATTTTTTTAACAT+AGG | - | chr5.1:14424702-14424721 | MS.gene68356:intron | 15.0% |
!!! | GTTTTTTTTGCTTATAATTT+AGG | + | chr5.1:14422915-14422934 | None:intergenic | 15.0% |
!!! | TATATTTCCTTTTATTACTT+TGG | - | chr5.1:14423925-14423944 | MS.gene68356:intron | 15.0% |
!!! | TATTTAATTAGGTTTTGATA+TGG | - | chr5.1:14424811-14424830 | MS.gene68356:intron | 15.0% |
!!! | TTTAATCAATCACTATATTT+TGG | + | chr5.1:14425435-14425454 | None:intergenic | 15.0% |
!! | AAGACTCAAATAATTATCTT+TGG | + | chr5.1:14424061-14424080 | None:intergenic | 20.0% |
!! | AATATTCAAATGTGATAGTT+TGG | + | chr5.1:14421779-14421798 | None:intergenic | 20.0% |
!! | GAATATACTTTGTATTTAAC+AGG | - | chr5.1:14422500-14422519 | MS.gene68356:intron | 20.0% |
!! | GTTTAATCTAATTATATGAG+AGG | - | chr5.1:14424732-14424751 | MS.gene68356:intron | 20.0% |
!! | TAATTCTCCAAAGTAATAAA+AGG | + | chr5.1:14423935-14423954 | None:intergenic | 20.0% |
!! | TATCTATACAGCAAATATAA+AGG | + | chr5.1:14423389-14423408 | None:intergenic | 20.0% |
!! | TCAATGAAAACAAAAAATAG+AGG | - | chr5.1:14425470-14425489 | MS.gene68356:intron | 20.0% |
!! | TTACAATAAACAACCTTTAA+AGG | + | chr5.1:14423307-14423326 | None:intergenic | 20.0% |
!! | TTCCTATAAAACTTATTTCA+AGG | - | chr5.1:14423107-14423126 | MS.gene68356:intron | 20.0% |
!! | TTCTTTCAATCAATTATTTC+AGG | - | chr5.1:14425382-14425401 | MS.gene68356:intron | 20.0% |
!! | TTGAAATTAAGAAAACATTG+AGG | - | chr5.1:14424973-14424992 | MS.gene68356:intron | 20.0% |
!! | TTGAAATTTGAATCATTTCA+TGG | - | chr5.1:14422292-14422311 | MS.gene68356:CDS | 20.0% |
!! | TTTCTTAACAATTTCTCTTA+TGG | + | chr5.1:14422029-14422048 | None:intergenic | 20.0% |
!!! | AATGTTTTCTTAATTTCAAG+TGG | + | chr5.1:14424972-14424991 | None:intergenic | 20.0% |
!!! | ATCCTTGAAATAAGTTTTAT+AGG | + | chr5.1:14423112-14423131 | None:intergenic | 20.0% |
!!! | ATGTTGATATTGTTGTTATT+AGG | - | chr5.1:14421547-14421566 | MS.gene68356:intron | 20.0% |
!!! | CAAAAAATTATCTTTTCCAA+AGG | - | chr5.1:14423001-14423020 | MS.gene68356:intron | 20.0% |
!!! | GTCTTTTTTGCTTATAATTT+GGG | + | chr5.1:14422951-14422970 | None:intergenic | 20.0% |
!!! | TGTTGATATTGTTGTTATTA+GGG | - | chr5.1:14421548-14421567 | MS.gene68356:intron | 20.0% |
!!! | TTAACTTTTGTCATTTGAAA+AGG | - | chr5.1:14424778-14424797 | MS.gene68356:intron | 20.0% |
!!! | TTTTTGAAAGCAAATTAAAC+AGG | - | chr5.1:14424129-14424148 | MS.gene68356:intron | 20.0% |
!!! | TTTTTGCTTATAATTTAGGA+CGG | + | chr5.1:14422911-14422930 | None:intergenic | 20.0% |
! | AAAAAGAAAATCTAGGAAGA+AGG | - | chr5.1:14424633-14424652 | MS.gene68356:intron | 25.0% |
! | AAAAATGTTTAAACAAGTGC+TGG | + | chr5.1:14423824-14423843 | None:intergenic | 25.0% |
! | AAAATCAAAAGCAAAATGAC+TGG | + | chr5.1:14425054-14425073 | None:intergenic | 25.0% |
! | AAATCAAAAGCAAAATGACT+GGG | + | chr5.1:14425053-14425072 | None:intergenic | 25.0% |
! | AACAAGATTTCCATAAAGAT+TGG | + | chr5.1:14425119-14425138 | None:intergenic | 25.0% |
! | ACAAGATTTCCATAAAGATT+GGG | + | chr5.1:14425118-14425137 | None:intergenic | 25.0% |
! | ATACACTGCTAAAATATTGA+AGG | + | chr5.1:14425687-14425706 | None:intergenic | 25.0% |
! | ATGAAAACAAAAAATAGAGG+TGG | - | chr5.1:14425473-14425492 | MS.gene68356:intron | 25.0% |
! | ATTTCATTATACTTGATTCC+AGG | + | chr5.1:14423674-14423693 | None:intergenic | 25.0% |
! | ATTTGATAAGAAAAATGCCA+CGG | + | chr5.1:14425254-14425273 | None:intergenic | 25.0% |
! | CCAAAAGTGGATAAATAATT+GGG | + | chr5.1:14423784-14423803 | None:intergenic | 25.0% |
! | GATGTAAAAACAATTTCCAT+TGG | + | chr5.1:14423087-14423106 | None:intergenic | 25.0% |
! | GTATCTAAATAACAGAAAGA+AGG | - | chr5.1:14423565-14423584 | MS.gene68356:intron | 25.0% |
! | GTTGGATGTTGTATTTAATT+AGG | - | chr5.1:14424800-14424819 | MS.gene68356:intron | 25.0% |
! | TAATCTTGATACAATCAAGA+TGG | - | chr5.1:14421806-14421825 | MS.gene68356:intron | 25.0% |
! | TTAGTAATATTTATACCTCC+CGG | + | chr5.1:14425184-14425203 | None:intergenic | 25.0% |
! | TTATTGTCGTGAGTTAATAA+GGG | + | chr5.1:14422118-14422137 | None:intergenic | 25.0% |
! | TTCCCATCTACAAATTAATT+AGG | - | chr5.1:14422587-14422606 | MS.gene68356:intron | 25.0% |
! | TTTATTGTCGTGAGTTAATA+AGG | + | chr5.1:14422119-14422138 | None:intergenic | 25.0% |
!! | AAACAATTTCCATTGGTTAT+TGG | + | chr5.1:14423080-14423099 | None:intergenic | 25.0% |
!! | ATGTATAATTTGCGTGTTTA+TGG | - | chr5.1:14422428-14422447 | MS.gene68356:intron | 25.0% |
!! | ATTAGGAGGTTTAATTTCTT+CGG | - | chr5.1:14422604-14422623 | MS.gene68356:intron | 25.0% |
!! | GTTACAGTTAAGTGATTTTT+CGG | - | chr5.1:14422164-14422183 | MS.gene68356:intron | 25.0% |
!! | TTGTTAGACATATTTTGCAT+CGG | - | chr5.1:14422549-14422568 | MS.gene68356:intron | 25.0% |
!!! | CTCCTAATTAATTTGTAGAT+GGG | + | chr5.1:14422592-14422611 | None:intergenic | 25.0% |
!!! | CTTTGCATTTAATTTTCCTT+TGG | + | chr5.1:14423020-14423039 | None:intergenic | 25.0% |
!!! | GAAGGTTGATTTTTCATTAA+TGG | + | chr5.1:14425669-14425688 | None:intergenic | 25.0% |
!!! | GGTCTTTTTTGCTTATAATT+TGG | + | chr5.1:14422952-14422971 | None:intergenic | 25.0% |
AAATCTTGTTGCAAATACAG+CGG | - | chr5.1:14425129-14425148 | MS.gene68356:intron | 30.0% | |
AAGAATAAGGTCTGTTTGAA+AGG | - | chr5.1:14421399-14421418 | MS.gene68356:intron | 30.0% | |
AAGATTTCCATAAAGATTGG+GGG | + | chr5.1:14425116-14425135 | None:intergenic | 30.0% | |
AATAGTATCTTGCTTCCATA+TGG | - | chr5.1:14425271-14425290 | MS.gene68356:intron | 30.0% | |
AATCGAGATATTCAAGCTTA+AGG | + | chr5.1:14425976-14425995 | None:intergenic | 30.0% | |
AATTTCTCTTATGGTTCTCT+AGG | + | chr5.1:14422020-14422039 | None:intergenic | 30.0% | |
AGGAAATATAAACAGACACA+TGG | + | chr5.1:14423915-14423934 | None:intergenic | 30.0% | |
ATAAACATATCAGCCAAAAG+TGG | + | chr5.1:14423797-14423816 | None:intergenic | 30.0% | |
ATTCATTTATCTTCCTCAAC+AGG | - | chr5.1:14425515-14425534 | MS.gene68356:intron | 30.0% | |
ATTTGAATCATTTCATGGCT+AGG | - | chr5.1:14422297-14422316 | MS.gene68356:intron | 30.0% | |
CAAGATTTCCATAAAGATTG+GGG | + | chr5.1:14425117-14425136 | None:intergenic | 30.0% | |
CCATCTACAAATTAATTAGG+AGG | - | chr5.1:14422590-14422609 | MS.gene68356:intron | 30.0% | |
CTGCTAATTTGAGTAATTTC+TGG | - | chr5.1:14424510-14424529 | MS.gene68356:intron | 30.0% | |
CTTTAGTTGAGTCAAATAAC+GGG | - | chr5.1:14425796-14425815 | MS.gene68356:CDS | 30.0% | |
CTTTCTTGCTAGTAATTGAT+TGG | - | chr5.1:14425020-14425039 | MS.gene68356:intron | 30.0% | |
GAATGAAACAGTATTTGTGT+AGG | - | chr5.1:14424655-14424674 | MS.gene68356:intron | 30.0% | |
GATATTCAAGCTTAAGGTTA+AGG | + | chr5.1:14425970-14425989 | None:intergenic | 30.0% | |
GCCAAAAGTGGATAAATAAT+TGG | + | chr5.1:14423785-14423804 | None:intergenic | 30.0% | |
GCTAACTAAAAGAAAAGTAG+TGG | - | chr5.1:14422864-14422883 | MS.gene68356:intron | 30.0% | |
GCTTTAGTTGAGTCAAATAA+CGG | - | chr5.1:14425795-14425814 | MS.gene68356:CDS | 30.0% | |
GGAAATATAAACAGACACAT+GGG | + | chr5.1:14423914-14423933 | None:intergenic | 30.0% | |
GGAAATTTCCAATCATCTTT+GGG | - | chr5.1:14422826-14422845 | MS.gene68356:intron | 30.0% | |
GGAATCGATTAAGAAGAATA+AGG | - | chr5.1:14421386-14421405 | MS.gene68356:intron | 30.0% | |
GGACTATTCTTTAAATGTAG+AGG | - | chr5.1:14423356-14423375 | MS.gene68356:intron | 30.0% | |
GGATAAATAATTGGGATTCA+GGG | + | chr5.1:14423776-14423795 | None:intergenic | 30.0% | |
TATTACCAGTGAATGCAATA+CGG | + | chr5.1:14422774-14422793 | None:intergenic | 30.0% | |
TCAAATTAGCAGAAACAGAA+AGG | + | chr5.1:14424502-14424521 | None:intergenic | 30.0% | |
TCATCTCACAAGAAAAAACT+TGG | - | chr5.1:14422372-14422391 | MS.gene68356:intron | 30.0% | |
TCTCAATAACCAATAACCAA+TGG | - | chr5.1:14423068-14423087 | MS.gene68356:intron | 30.0% | |
TGGATAAATAATTGGGATTC+AGG | + | chr5.1:14423777-14423796 | None:intergenic | 30.0% | |
TTATTAGGGAGAATACTGAA+GGG | - | chr5.1:14421562-14421581 | MS.gene68356:intron | 30.0% | |
TTTAGTTGAGTCAAATAACG+GGG | - | chr5.1:14425797-14425816 | MS.gene68356:CDS | 30.0% | |
! | AAGAATAGTCCTCTAAGAAA+CGG | + | chr5.1:14423347-14423366 | None:intergenic | 30.0% |
! | AATGCTATTTGGTAATATGC+GGG | - | chr5.1:14422685-14422704 | MS.gene68356:intron | 30.0% |
! | AATGGTAGTGACAACATAAT+TGG | - | chr5.1:14425586-14425605 | MS.gene68356:intron | 30.0% |
! | ATTTTGCATCGGAAATTTGT+GGG | - | chr5.1:14422560-14422579 | MS.gene68356:intron | 30.0% |
! | CCCAATTATTTATCCACTTT+TGG | - | chr5.1:14423781-14423800 | MS.gene68356:CDS | 30.0% |
! | CTAGATTTTCTTTTTGTGCA+GGG | + | chr5.1:14424628-14424647 | None:intergenic | 30.0% |
! | GAATGCTATTTGGTAATATG+CGG | - | chr5.1:14422684-14422703 | MS.gene68356:intron | 30.0% |
! | GTTTAATTTCTTCGGTGAAA+TGG | - | chr5.1:14422612-14422631 | MS.gene68356:intron | 30.0% |
! | TATTTTGCATCGGAAATTTG+TGG | - | chr5.1:14422559-14422578 | MS.gene68356:intron | 30.0% |
! | TGTATGAGATTTTCTATCGT+TGG | - | chr5.1:14424090-14424109 | MS.gene68356:intron | 30.0% |
!! | AGTATCTATTTCTGTTGAAC+TGG | + | chr5.1:14424847-14424866 | None:intergenic | 30.0% |
!! | ATTTGGTGCTATTAGTTTGT+TGG | - | chr5.1:14423856-14423875 | MS.gene68356:CDS | 30.0% |
!! | ATTTGTTATACTTCCTCAGA+GGG | + | chr5.1:14424889-14424908 | None:intergenic | 30.0% |
!! | CCTCCTAATTAATTTGTAGA+TGG | + | chr5.1:14422593-14422612 | None:intergenic | 30.0% |
!! | CTTTTGTCATTTGAAAAGGT+TGG | - | chr5.1:14424782-14424801 | MS.gene68356:intron | 30.0% |
!!! | ATGAAGGAAACTTTTTTGAG+AGG | - | chr5.1:14424200-14424219 | MS.gene68356:intron | 30.0% |
!!! | GATTTTTTTGTTCTCGAAAG+CGG | - | chr5.1:14422654-14422673 | MS.gene68356:intron | 30.0% |
AAACAGTATTTGTGTAGGAC+AGG | - | chr5.1:14424660-14424679 | MS.gene68356:intron | 35.0% | |
AACAGTATTTGTGTAGGACA+GGG | - | chr5.1:14424661-14424680 | MS.gene68356:intron | 35.0% | |
AACATTATGAAGCTTGCAGA+TGG | - | chr5.1:14423608-14423627 | MS.gene68356:intron | 35.0% | |
AAGATGTGGAAATTCGACTT+AGG | - | chr5.1:14421905-14421924 | MS.gene68356:intron | 35.0% | |
AATAAGGTCTGTTTGAAAGG+TGG | - | chr5.1:14421402-14421421 | MS.gene68356:intron | 35.0% | |
AATGTCTTTGCAGGTAATGT+TGG | - | chr5.1:14426005-14426024 | MS.gene68356:CDS | 35.0% | |
AGATATTTCCCGTTTCTTAG+AGG | - | chr5.1:14423335-14423354 | MS.gene68356:intron | 35.0% | |
AGCTTGAATATCTCGATTCA+TGG | - | chr5.1:14425978-14425997 | MS.gene68356:CDS | 35.0% | |
AGGAATGACAACATTAGAGA+GGG | - | chr5.1:14421857-14421876 | MS.gene68356:intron | 35.0% | |
AGGTGGTATAGAAATCAAAC+TGG | - | chr5.1:14425490-14425509 | MS.gene68356:intron | 35.0% | |
ATGTCTTTGCAGGTAATGTT+GGG | - | chr5.1:14426006-14426025 | MS.gene68356:CDS | 35.0% | |
ATTACCAGTGAATGCAATAC+GGG | + | chr5.1:14422773-14422792 | None:intergenic | 35.0% | |
ATTCAAGCTTAAGGTTAAGG+TGG | + | chr5.1:14425967-14425986 | None:intergenic | 35.0% | |
ATTTCCAAGTCCTTAGAAAC+TGG | - | chr5.1:14422722-14422741 | MS.gene68356:intron | 35.0% | |
CAAGAAAAAACTTGGATTGC+TGG | - | chr5.1:14422380-14422399 | MS.gene68356:intron | 35.0% | |
CATTTATCCAGTGATTTCTG+TGG | + | chr5.1:14424005-14424024 | None:intergenic | 35.0% | |
CCTAGCAAAATTTGAGTATG+AGG | + | chr5.1:14423493-14423512 | None:intergenic | 35.0% | |
CCTGCACAAAAAGAAAATCT+AGG | - | chr5.1:14424626-14424645 | MS.gene68356:intron | 35.0% | |
CGGAAATTTCCAATCATCTT+TGG | - | chr5.1:14422825-14422844 | MS.gene68356:intron | 35.0% | |
GAAAATATAGATAGGGCAGT+TGG | - | chr5.1:14425872-14425891 | MS.gene68356:CDS | 35.0% | |
GAAAGCAAATTAAACAGGAG+TGG | - | chr5.1:14424134-14424153 | MS.gene68356:intron | 35.0% | |
GAATACTTATTGGGTAGCAA+AGG | + | chr5.1:14424596-14424615 | None:intergenic | 35.0% | |
GGATAAGAGAACTTACTAGA+GGG | - | chr5.1:14421978-14421997 | MS.gene68356:intron | 35.0% | |
GTTATTAGGGAGAATACTGA+AGG | - | chr5.1:14421561-14421580 | MS.gene68356:intron | 35.0% | |
GTTTATCATCTGAGAAGCTA+AGG | + | chr5.1:14422751-14422770 | None:intergenic | 35.0% | |
TAGGAATGACAACATTAGAG+AGG | - | chr5.1:14421856-14421875 | MS.gene68356:intron | 35.0% | |
TATTAGGGAGAATACTGAAG+GGG | - | chr5.1:14421563-14421582 | MS.gene68356:intron | 35.0% | |
TCAAGTATCCCAAAGATGAT+TGG | + | chr5.1:14422837-14422856 | None:intergenic | 35.0% | |
TCTTGATACAATCAAGATGG+TGG | - | chr5.1:14421809-14421828 | MS.gene68356:intron | 35.0% | |
TGCTTATAATATGGGACAGA+GGG | - | chr5.1:14423196-14423215 | MS.gene68356:intron | 35.0% | |
TGGATAAGAGAACTTACTAG+AGG | - | chr5.1:14421977-14421996 | MS.gene68356:intron | 35.0% | |
TGGCTCGTTGAATACTTATT+GGG | + | chr5.1:14424605-14424624 | None:intergenic | 35.0% | |
TTAAACAACAGAGAAACCCA+TGG | + | chr5.1:14423968-14423987 | None:intergenic | 35.0% | |
TTCTATGAGTACTCACTCAT+TGG | - | chr5.1:14422262-14422281 | MS.gene68356:CDS | 35.0% | |
TTGCTTATAATATGGGACAG+AGG | - | chr5.1:14423195-14423214 | MS.gene68356:intron | 35.0% | |
! | AATTGCTTGTACCTTTTGCA+TGG | - | chr5.1:14422466-14422485 | MS.gene68356:intron | 35.0% |
! | AGAATAGTCCTCTAAGAAAC+GGG | + | chr5.1:14423346-14423365 | None:intergenic | 35.0% |
! | CCTAGATTTTCTTTTTGTGC+AGG | + | chr5.1:14424629-14424648 | None:intergenic | 35.0% |
! | CCTCATACTCAAATTTTGCT+AGG | - | chr5.1:14423490-14423509 | MS.gene68356:intron | 35.0% |
! | CTCTGAGGAAGTATAACAAA+TGG | - | chr5.1:14424888-14424907 | MS.gene68356:intron | 35.0% |
! | CTTTTGCATGGTAGATAACT+CGG | - | chr5.1:14422478-14422497 | MS.gene68356:intron | 35.0% |
! | GTAGAAATTGTGATAACGTG+TGG | - | chr5.1:14422232-14422251 | MS.gene68356:intron | 35.0% |
! | TGCTTATAATTTAGGACGGA+GGG | + | chr5.1:14422907-14422926 | None:intergenic | 35.0% |
! | TTGCTTATAATTTAGGACGG+AGG | + | chr5.1:14422908-14422927 | None:intergenic | 35.0% |
! | TTTCTTCGGTGAAATGGATT+CGG | - | chr5.1:14422618-14422637 | MS.gene68356:intron | 35.0% |
! | TTTTGCATCGGAAATTTGTG+GGG | - | chr5.1:14422561-14422580 | MS.gene68356:intron | 35.0% |
!! | ATCATCTTTGGGATACTTGA+TGG | - | chr5.1:14422837-14422856 | MS.gene68356:intron | 35.0% |
!! | CATTTGTTATACTTCCTCAG+AGG | + | chr5.1:14424890-14424909 | None:intergenic | 35.0% |
!! | CTATCGTTGGTTCAATCAAA+AGG | - | chr5.1:14424103-14424122 | MS.gene68356:intron | 35.0% |
!! | GTGAAACGAGTCATTTTAGA+GGG | - | chr5.1:14426191-14426210 | MS.gene68356:CDS | 35.0% |
!! | TAAACACTATTTCTGCTTGC+AGG | - | chr5.1:14425087-14425106 | MS.gene68356:intron | 35.0% |
!! | TCATTTTAGAGGGTAAGTAC+AGG | - | chr5.1:14426201-14426220 | MS.gene68356:CDS | 35.0% |
!! | TGTGAAACGAGTCATTTTAG+AGG | - | chr5.1:14426190-14426209 | MS.gene68356:CDS | 35.0% |
!!! | CTTTTTTGAGAGGATAACGA+AGG | - | chr5.1:14424210-14424229 | MS.gene68356:intron | 35.0% |
!!! | TTGCTGGCTTTTAGATGAAT+TGG | - | chr5.1:14422396-14422415 | MS.gene68356:intron | 35.0% |
AAATTCGACTTAGGCGGTTT+GGG | - | chr5.1:14421914-14421933 | MS.gene68356:intron | 40.0% | |
AAGATGTCTGAGCATCATTG+CGG | + | chr5.1:14426135-14426154 | None:intergenic | 40.0% | |
AATACTGAAGGGGAATATGC+TGG | - | chr5.1:14421573-14421592 | MS.gene68356:intron | 40.0% | |
ACAACATTAGAGAGGGAGTT+GGG | - | chr5.1:14421864-14421883 | MS.gene68356:intron | 40.0% | |
ACCATGACATCAAATTGCTC+AGG | + | chr5.1:14423734-14423753 | None:intergenic | 40.0% | |
ACCTTGACATTGTGACATGT+GGG | - | chr5.1:14423455-14423474 | MS.gene68356:intron | 40.0% | |
AGAAAAGAAAGCCAATCCTG+TGG | - | chr5.1:14426094-14426113 | MS.gene68356:CDS | 40.0% | |
ATACTTCCTCAGAGGGATAA+AGG | + | chr5.1:14424882-14424901 | None:intergenic | 40.0% | |
ATCTGGAAGGATTGACTACT+AGG | - | chr5.1:14421517-14421536 | MS.gene68356:intron | 40.0% | |
ATGTGGAAATTCGACTTAGG+CGG | - | chr5.1:14421908-14421927 | MS.gene68356:intron | 40.0% | |
ATTCTTGGAATCTTGTCGAG+AGG | - | chr5.1:14423634-14423653 | MS.gene68356:intron | 40.0% | |
CACCTTGTTCAAATACAGCA+TGG | + | chr5.1:14426037-14426056 | None:intergenic | 40.0% | |
CATGGATGAAATGTCTTTGC+AGG | - | chr5.1:14425996-14426015 | MS.gene68356:CDS | 40.0% | |
CCACTGTTGATGTCCTTTAA+AGG | - | chr5.1:14423291-14423310 | MS.gene68356:intron | 40.0% | |
CGAGTTATCTACCATGCAAA+AGG | + | chr5.1:14422480-14422499 | None:intergenic | 40.0% | |
CGGTGATAGAGAATGCTATT+TGG | - | chr5.1:14422674-14422693 | MS.gene68356:intron | 40.0% | |
CTAGCCATTTGCTTATCTCT+GGG | - | chr5.1:14424159-14424178 | MS.gene68356:intron | 40.0% | |
CTCCTTACCAAAGAATCAAC+AGG | + | chr5.1:14421955-14421974 | None:intergenic | 40.0% | |
CTTGATTCCAGGATACTTTG+TGG | + | chr5.1:14423663-14423682 | None:intergenic | 40.0% | |
GACCATGCTGTATTTGAACA+AGG | - | chr5.1:14426032-14426051 | MS.gene68356:CDS | 40.0% | |
GCTTGCAGATGGTTTATTCT+TGG | - | chr5.1:14423619-14423638 | MS.gene68356:intron | 40.0% | |
GTGGCTCGTTGAATACTTAT+TGG | + | chr5.1:14424606-14424625 | None:intergenic | 40.0% | |
TAAACCCGTATTGCATTCAC+TGG | - | chr5.1:14422766-14422785 | MS.gene68356:intron | 40.0% | |
TACTGCATCAACAACCTCTT+GGG | + | chr5.1:14426255-14426274 | None:intergenic | 40.0% | |
TAGCCATTTGCTTATCTCTG+GGG | - | chr5.1:14424160-14424179 | MS.gene68356:intron | 40.0% | |
TCATAACGACAGTGACCATA+TGG | + | chr5.1:14425289-14425308 | None:intergenic | 40.0% | |
TCCAATCGTTCAGCAAATAC+AGG | + | chr5.1:14426164-14426183 | None:intergenic | 40.0% | |
TCTGTTGAACTGGCACAATA+TGG | + | chr5.1:14424837-14424856 | None:intergenic | 40.0% | |
TGATTCTTTGGTAAGGAGAG+TGG | - | chr5.1:14421957-14421976 | MS.gene68356:intron | 40.0% | |
TGCTCTCTTTGTAGTTACTG+TGG | - | chr5.1:14424422-14424441 | MS.gene68356:intron | 40.0% | |
TGGGGGCAATAACATAATGA+AGG | - | chr5.1:14424184-14424203 | MS.gene68356:intron | 40.0% | |
TGTCGTTATGAGATGTGTGA+GGG | - | chr5.1:14425298-14425317 | MS.gene68356:intron | 40.0% | |
TGTCTTTGCAGGTAATGTTG+GGG | - | chr5.1:14426007-14426026 | MS.gene68356:CDS | 40.0% | |
TTACTGCATCAACAACCTCT+TGG | + | chr5.1:14426256-14426275 | None:intergenic | 40.0% | |
TTCCTTACCAACATTTCCTG+CGG | + | chr5.1:14426063-14426082 | None:intergenic | 40.0% | |
TTCGAGAAATTCGAAGTGCA+CGG | - | chr5.1:14421333-14421352 | MS.gene68356:CDS | 40.0% | |
! | ATCGATTCCATCACTTCAGA+TGG | + | chr5.1:14421375-14421394 | None:intergenic | 40.0% |
! | CAAGTTGACGGGATATGATT+AGG | - | chr5.1:14421837-14421856 | MS.gene68356:intron | 40.0% |
! | CCTTTAAAGGACATCAACAG+TGG | + | chr5.1:14423294-14423313 | None:intergenic | 40.0% |
! | GATTTTCTTTTTGTGCAGGG+TGG | + | chr5.1:14424625-14424644 | None:intergenic | 40.0% |
! | GCTTGTCAGTTGCTTTAATC+TGG | - | chr5.1:14421500-14421519 | MS.gene68356:intron | 40.0% |
! | GTCAGTTGCTTTAATCTGGA+AGG | - | chr5.1:14421504-14421523 | MS.gene68356:intron | 40.0% |
! | TCCTGTATTTGCTGAACGAT+TGG | - | chr5.1:14426160-14426179 | MS.gene68356:CDS | 40.0% |
! | TTCTTCGGTGAAATGGATTC+GGG | - | chr5.1:14422619-14422638 | MS.gene68356:intron | 40.0% |
! | TTGAGTCAAATAACGGGGAT+GGG | - | chr5.1:14425802-14425821 | MS.gene68356:CDS | 40.0% |
!! | ATATGCTGGTCTTGAACATG+AGG | - | chr5.1:14421587-14421606 | MS.gene68356:intron | 40.0% |
!! | ATGGTGGAAACTCAAGTTGA+CGG | - | chr5.1:14421825-14421844 | MS.gene68356:intron | 40.0% |
!! | GACCTGTTGATTCTTTGGTA+AGG | - | chr5.1:14421950-14421969 | MS.gene68356:intron | 40.0% |
!! | GAGAAGACCTGTTGATTCTT+TGG | - | chr5.1:14421945-14421964 | MS.gene68356:intron | 40.0% |
AAGTACAGGACAAAGGACCT+TGG | - | chr5.1:14426215-14426234 | MS.gene68356:CDS | 45.0% | |
ACCCACATGTCACAATGTCA+AGG | + | chr5.1:14423459-14423478 | None:intergenic | 45.0% | |
ACTTCTGCCACAGAAATCAC+TGG | - | chr5.1:14423995-14424014 | MS.gene68356:intron | 45.0% | |
AGAATTAGTGCCAACTGCCA+TGG | - | chr5.1:14423948-14423967 | MS.gene68356:intron | 45.0% | |
AGAGGGTAAGTACAGGACAA+AGG | - | chr5.1:14426208-14426227 | MS.gene68356:CDS | 45.0% | |
AGCCATTTGCTTATCTCTGG+GGG | - | chr5.1:14424161-14424180 | MS.gene68356:intron | 45.0% | |
ATGAGTACTCACTCATTGGC+TGG | - | chr5.1:14422266-14422285 | MS.gene68356:CDS | 45.0% | |
CAAATGCTGGAGAGAAGATG+TGG | - | chr5.1:14421891-14421910 | MS.gene68356:intron | 45.0% | |
CAACATTAGAGAGGGAGTTG+GGG | - | chr5.1:14421865-14421884 | MS.gene68356:intron | 45.0% | |
CACCTTGACATTGTGACATG+TGG | - | chr5.1:14423454-14423473 | MS.gene68356:intron | 45.0% | |
CAGGTTACCCCCAATCTTTA+TGG | - | chr5.1:14425106-14425125 | MS.gene68356:intron | 45.0% | |
CATTACTTGTTCAACAGCGC+CGG | + | chr5.1:14421289-14421308 | None:intergenic | 45.0% | |
CTATCTCCTTTATCCCTCTG+AGG | - | chr5.1:14424873-14424892 | MS.gene68356:intron | 45.0% | |
CTGTCGTTATGAGATGTGTG+AGG | - | chr5.1:14425297-14425316 | MS.gene68356:intron | 45.0% | |
CTTGAACATGAGGTTGTTCC+CGG | - | chr5.1:14421597-14421616 | MS.gene68356:intron | 45.0% | |
GAAATTCGACTTAGGCGGTT+TGG | - | chr5.1:14421913-14421932 | MS.gene68356:intron | 45.0% | |
GAATTAGTGCCAACTGCCAT+GGG | - | chr5.1:14423949-14423968 | MS.gene68356:intron | 45.0% | |
GACAACATTAGAGAGGGAGT+TGG | - | chr5.1:14421863-14421882 | MS.gene68356:intron | 45.0% | |
GACGATACATCACACATACG+AGG | - | chr5.1:14422074-14422093 | MS.gene68356:intron | 45.0% | |
GCCTGAGCAATTTGATGTCA+TGG | - | chr5.1:14423730-14423749 | MS.gene68356:CDS | 45.0% | |
GCTAGCCATTTGCTTATCTC+TGG | - | chr5.1:14424158-14424177 | MS.gene68356:intron | 45.0% | |
GCTCTCATTTGATTATGCCG+TGG | - | chr5.1:14425234-14425253 | MS.gene68356:intron | 45.0% | |
GGTCTGTTTGAAAGGTGGAT+TGG | - | chr5.1:14421407-14421426 | MS.gene68356:intron | 45.0% | |
GTCGTTATGAGATGTGTGAG+GGG | - | chr5.1:14425299-14425318 | MS.gene68356:intron | 45.0% | |
TCCAAGTCCTTAGAAACTGG+TGG | - | chr5.1:14422725-14422744 | MS.gene68356:intron | 45.0% | |
TCGAATTTCTCGAAGTGCAC+TGG | + | chr5.1:14421327-14421346 | None:intergenic | 45.0% | |
TCGTTATGAGATGTGTGAGG+GGG | - | chr5.1:14425300-14425319 | MS.gene68356:intron | 45.0% | |
TGAGCATCATTGCGGAAGAA+AGG | + | chr5.1:14426127-14426146 | None:intergenic | 45.0% | |
TGATGCCATCACTGTTTCCA+AGG | + | chr5.1:14424687-14424706 | None:intergenic | 45.0% | |
TTCCGCAGGAAATGTTGGTA+AGG | - | chr5.1:14426058-14426077 | MS.gene68356:CDS | 45.0% | |
TTCCTCAACAGGTTGCAGTA+TGG | - | chr5.1:14425526-14425545 | MS.gene68356:intron | 45.0% | |
! | AAGGTGTTTGAGGAGGTTTG+TGG | + | chr5.1:14421148-14421167 | None:intergenic | 45.0% |
! | AGCGATTCCATCTGAAGTGA+TGG | - | chr5.1:14421365-14421384 | MS.gene68356:CDS | 45.0% |
! | AGTTTTCTCGTCAGTCGTTG+AGG | - | chr5.1:14425745-14425764 | MS.gene68356:intron | 45.0% |
! | ATTTGCTTATCTCTGGGGGT+GGG | - | chr5.1:14424165-14424184 | MS.gene68356:intron | 45.0% |
! | GTTGAGTCAAATAACGGGGA+TGG | - | chr5.1:14425801-14425820 | MS.gene68356:CDS | 45.0% |
! | TGAGTACTCACTCATTGGCT+GGG | - | chr5.1:14422267-14422286 | MS.gene68356:CDS | 45.0% |
! | TGGAGATAAGGTGTTTGAGG+AGG | + | chr5.1:14421155-14421174 | None:intergenic | 45.0% |
!! | CTAGACTCAACAGTTCTGAG+TGG | + | chr5.1:14425332-14425351 | None:intergenic | 45.0% |
!! | GCTTAATTTGCAGCTGAGGA+AGG | - | chr5.1:14421458-14421477 | MS.gene68356:intron | 45.0% |
!! | GGGGTAATGGAGTTGTCAAA+TGG | - | chr5.1:14425568-14425587 | MS.gene68356:intron | 45.0% |
!! | GTTCGCTTAATTTGCAGCTG+AGG | - | chr5.1:14421454-14421473 | MS.gene68356:intron | 45.0% |
!! | TGGATTCGGGTTGCAAGTTT+AGG | - | chr5.1:14422632-14422651 | MS.gene68356:intron | 45.0% |
!! | TGGTGGAAACTCAAGTTGAC+GGG | - | chr5.1:14421826-14421845 | MS.gene68356:intron | 45.0% |
!! | TTATTAAGTTAATTAATTAA+TGG | - | chr5.1:14421705-14421724 | MS.gene68356:intron | 5.0% |
ACAGAGAAACCCATGGCAGT+TGG | + | chr5.1:14423961-14423980 | None:intergenic | 50.0% | |
ACAGGACAAAGGACCTTGGA+GGG | - | chr5.1:14426219-14426238 | MS.gene68356:CDS | 50.0% | |
ATTTGTGTAGGACAGGGCCT+TGG | - | chr5.1:14424667-14424686 | MS.gene68356:intron | 50.0% | |
CACCCCCAGAGATAAGCAAA+TGG | + | chr5.1:14424166-14424185 | None:intergenic | 50.0% | |
CGCAATGTAACCCTAATCCC+CGG | - | chr5.1:14421240-14421259 | MS.gene68356:CDS | 50.0% | |
CGGCGCTGTTGAACAAGTAA+TGG | - | chr5.1:14421287-14421306 | MS.gene68356:CDS | 50.0% | |
CGGGGATTAGGGTTACATTG+CGG | + | chr5.1:14421242-14421261 | None:intergenic | 50.0% | |
CTCAACAGGTTGCAGTATGG+AGG | - | chr5.1:14425529-14425548 | MS.gene68356:intron | 50.0% | |
CTCCATACTGCAACCTGTTG+AGG | + | chr5.1:14425531-14425550 | None:intergenic | 50.0% | |
CTTCCACAAATTCAGCCCAC+AGG | + | chr5.1:14425912-14425931 | None:intergenic | 50.0% | |
CTTGAGACTCTCAACGACAC+CGG | + | chr5.1:14421619-14421638 | None:intergenic | 50.0% | |
CTTGTTGCAAATACAGCGGC+AGG | - | chr5.1:14425133-14425152 | MS.gene68356:intron | 50.0% | |
GAACTAACACCACCACCCAT+CGG | + | chr5.1:14421438-14421457 | None:intergenic | 50.0% | |
GAGAACTTACTAGAGGGCAG+AGG | - | chr5.1:14421984-14422003 | MS.gene68356:intron | 50.0% | |
GATTAGGGTTACATTGCGGG+GGG | + | chr5.1:14421238-14421257 | None:intergenic | 50.0% | |
GCTAAGGCCACCAGTTTCTA+AGG | + | chr5.1:14422735-14422754 | None:intergenic | 50.0% | |
GGATTAGGGTTACATTGCGG+GGG | + | chr5.1:14421239-14421258 | None:intergenic | 50.0% | |
GGGATTAGGGTTACATTGCG+GGG | + | chr5.1:14421240-14421259 | None:intergenic | 50.0% | |
GGGGATTAGGGTTACATTGC+GGG | + | chr5.1:14421241-14421260 | None:intergenic | 50.0% | |
GTCCTTTGTGTTGGACCTGT+GGG | - | chr5.1:14425894-14425913 | MS.gene68356:CDS | 50.0% | |
TACAGGACAAAGGACCTTGG+AGG | - | chr5.1:14426218-14426237 | MS.gene68356:CDS | 50.0% | |
TCAAGTGGCACCAAGAGAAC+AGG | + | chr5.1:14424957-14424976 | None:intergenic | 50.0% | |
TGCATCAACAACCTCTTGGG+TGG | + | chr5.1:14426252-14426271 | None:intergenic | 50.0% | |
TTGAGACTCTCAACGACACC+GGG | + | chr5.1:14421618-14421637 | None:intergenic | 50.0% | |
! | CATTTGCTTATCTCTGGGGG+TGG | - | chr5.1:14424164-14424183 | MS.gene68356:intron | 50.0% |
! | CTGTGGGCTGAATTTGTGGA+AGG | - | chr5.1:14425910-14425929 | MS.gene68356:CDS | 50.0% |
! | GAGGTTGCCACAAAGTATCC+TGG | - | chr5.1:14423653-14423672 | MS.gene68356:intron | 50.0% |
! | GCCACCAGTTTCTAAGGACT+TGG | + | chr5.1:14422729-14422748 | None:intergenic | 50.0% |
! | GCGTGGAGATAAGGTGTTTG+AGG | + | chr5.1:14421158-14421177 | None:intergenic | 50.0% |
! | GTCAAATAACGGGGATGGGT+TGG | - | chr5.1:14425806-14425825 | MS.gene68356:CDS | 50.0% |
! | TTTGAACAAGGTGCTTCCGC+AGG | - | chr5.1:14426044-14426063 | MS.gene68356:CDS | 50.0% |
! | TTTGCTTATCTCTGGGGGTG+GGG | - | chr5.1:14424166-14424185 | MS.gene68356:intron | 50.0% |
!! | AAGGAGAAGTGCCACAGGAT+TGG | + | chr5.1:14426108-14426127 | None:intergenic | 50.0% |
!! | GAAGAAAGGAGAAGTGCCAC+AGG | + | chr5.1:14426113-14426132 | None:intergenic | 50.0% |
ACCAAGAGAACAGGCGGGAA+GGG | + | chr5.1:14424948-14424967 | None:intergenic | 55.0% | |
AGCCCACAGGTCCAACACAA+AGG | + | chr5.1:14425899-14425918 | None:intergenic | 55.0% | |
AGGCAACAGCAGCTGTTGTG+GGG | - | chr5.1:14425549-14425568 | MS.gene68356:intron | 55.0% | |
AGTGGCACCAAGAGAACAGG+CGG | + | chr5.1:14424954-14424973 | None:intergenic | 55.0% | |
CAGCAGCTGTTGTGGGGTAA+TGG | - | chr5.1:14425555-14425574 | MS.gene68356:intron | 55.0% | |
CAGGGCCTTGGAAACAGTGA+TGG | - | chr5.1:14424679-14424698 | MS.gene68356:intron | 55.0% | |
GAGGCAACAGCAGCTGTTGT+GGG | - | chr5.1:14425548-14425567 | MS.gene68356:intron | 55.0% | |
GCATGTAGGTTACGGTACGG+GGG | + | chr5.1:14421197-14421216 | None:intergenic | 55.0% | |
GGAGTTGGGGTAGCAAATGC+TGG | - | chr5.1:14421878-14421897 | MS.gene68356:intron | 55.0% | |
GGCATGTAGGTTACGGTACG+GGG | + | chr5.1:14421198-14421217 | None:intergenic | 55.0% | |
GGGCAGTTGGTCCTTTGTGT+TGG | - | chr5.1:14425885-14425904 | MS.gene68356:CDS | 55.0% | |
GGGCATGTAGGTTACGGTAC+GGG | + | chr5.1:14421199-14421218 | None:intergenic | 55.0% | |
GGGGCATGTAGGTTACGGTA+CGG | + | chr5.1:14421200-14421219 | None:intergenic | 55.0% | |
GGTCCTTTGTGTTGGACCTG+TGG | - | chr5.1:14425893-14425912 | MS.gene68356:CDS | 55.0% | |
GGTGCTTCCGCAGGAAATGT+TGG | - | chr5.1:14426053-14426072 | MS.gene68356:CDS | 55.0% | |
TTACTAGAGGGCAGAGGCAG+AGG | - | chr5.1:14421990-14422009 | MS.gene68356:intron | 55.0% | |
! | AATACAGCGGCAGGCATTGC+TGG | - | chr5.1:14425142-14425161 | MS.gene68356:intron | 55.0% |
! | GGACCTGTGGGCTGAATTTG+TGG | - | chr5.1:14425906-14425925 | MS.gene68356:CDS | 55.0% |
! | TTGCTTATCTCTGGGGGTGG+GGG | - | chr5.1:14424167-14424186 | MS.gene68356:intron | 55.0% |
!! | CGGCAGTGCTGTTTGTAGGA+TGG | - | chr5.1:14425839-14425858 | MS.gene68356:CDS | 55.0% |
!! | CGGTGTCGTTGAGAGTCTCA+AGG | - | chr5.1:14421617-14421636 | MS.gene68356:intron | 55.0% |
ACCCTTCCCGCCTGTTCTCT+TGG | - | chr5.1:14424944-14424963 | MS.gene68356:intron | 60.0% | |
AGGGACAAGCACCACCCAAG+AGG | - | chr5.1:14426238-14426257 | MS.gene68356:CDS | 60.0% | |
CACCAAGAGAACAGGCGGGA+AGG | + | chr5.1:14424949-14424968 | None:intergenic | 60.0% | |
CTAATCCCCGGCGACGGAAT+CGG | - | chr5.1:14421252-14421271 | MS.gene68356:CDS | 60.0% | |
GATTCCGTCGCCGGGGATTA+GGG | + | chr5.1:14421253-14421272 | None:intergenic | 60.0% | |
GGAATCGGCCCTCTCGTAAC+CGG | - | chr5.1:14421267-14421286 | MS.gene68356:CDS | 60.0% | |
GGAGGCAACAGCAGCTGTTG+TGG | - | chr5.1:14425547-14425566 | MS.gene68356:intron | 60.0% | |
GTAACCCTAATCCCCGGCGA+CGG | - | chr5.1:14421246-14421265 | MS.gene68356:CDS | 60.0% | |
GTAGGTTACGGTACGGGGGT+GGG | + | chr5.1:14421193-14421212 | None:intergenic | 60.0% | |
GTGGCACCAAGAGAACAGGC+GGG | + | chr5.1:14424953-14424972 | None:intergenic | 60.0% | |
TGTAGGTTACGGTACGGGGG+TGG | + | chr5.1:14421194-14421213 | None:intergenic | 60.0% | |
!! | AACGGGGATGGGTTGGAGTC+TGG | - | chr5.1:14425813-14425832 | MS.gene68356:CDS | 60.0% |
!! | AGGTGGATTGGCGACTCCGA+TGG | - | chr5.1:14421419-14421438 | MS.gene68356:intron | 60.0% |
!! | CAACAGCGCCGGTTACGAGA+GGG | + | chr5.1:14421278-14421297 | None:intergenic | 60.0% |
!! | GATGGGTTGGAGTCTGGTGG+CGG | - | chr5.1:14425819-14425838 | MS.gene68356:CDS | 60.0% |
!! | GGTGGATTGGCGACTCCGAT+GGG | - | chr5.1:14421420-14421439 | MS.gene68356:intron | 60.0% |
!! | GTGGCGGCAGTGCTGTTTGT+AGG | - | chr5.1:14425835-14425854 | MS.gene68356:CDS | 60.0% |
!! | TCAACAGCGCCGGTTACGAG+AGG | + | chr5.1:14421279-14421298 | None:intergenic | 60.0% |
!! | TGGAGGCACTGGTGTCATGC+CGG | - | chr5.1:14425162-14425181 | MS.gene68356:intron | 60.0% |
ATTGCGGGGGGTTCCGTCTC+CGG | + | chr5.1:14421226-14421245 | None:intergenic | 65.0% | |
CGATTCCGTCGCCGGGGATT+AGG | + | chr5.1:14421254-14421273 | None:intergenic | 65.0% | |
GGGGCGGGGCATGTAGGTTA+CGG | + | chr5.1:14421205-14421224 | None:intergenic | 65.0% | |
GGGTGGTGCTTGTCCCTCCA+AGG | + | chr5.1:14426235-14426254 | None:intergenic | 65.0% | |
GTAACCTACATGCCCCGCCC+CGG | - | chr5.1:14421204-14421223 | MS.gene68356:CDS | 65.0% | |
TTACGGTACGGGGGTGGGTG+AGG | + | chr5.1:14421188-14421207 | None:intergenic | 65.0% | |
TTGGCGACTCCGATGGGTGG+TGG | - | chr5.1:14421426-14421445 | MS.gene68356:intron | 65.0% | |
! | ACAGCGGCAGGCATTGCTGG+AGG | - | chr5.1:14425145-14425164 | MS.gene68356:intron | 65.0% |
! | GCAGGCATTGCTGGAGGCAC+TGG | - | chr5.1:14425151-14425170 | MS.gene68356:intron | 65.0% |
! | GGATTGGCGACTCCGATGGG+TGG | - | chr5.1:14421423-14421442 | MS.gene68356:intron | 65.0% |
! | GGTGGTGGCGCGTGGAGATA+AGG | + | chr5.1:14421167-14421186 | None:intergenic | 65.0% |
!! | GGAGGCACTGGTGTCATGCC+GGG | - | chr5.1:14425163-14425182 | MS.gene68356:intron | 65.0% |
!! | GGGGATGGGTTGGAGTCTGG+TGG | - | chr5.1:14425816-14425835 | MS.gene68356:CDS | 65.0% |
TACATGCCCCGCCCCGGAGA+CGG | - | chr5.1:14421210-14421229 | MS.gene68356:CDS | 70.0% | |
TACGGGGGTGGGTGAGGTGG+TGG | + | chr5.1:14421182-14421201 | None:intergenic | 70.0% | |
TTGCGGGGGGTTCCGTCTCC+GGG | + | chr5.1:14421225-14421244 | None:intergenic | 70.0% | |
! | AGAGGGCCGATTCCGTCGCC+GGG | + | chr5.1:14421261-14421280 | None:intergenic | 70.0% |
! | GAGAGGGCCGATTCCGTCGC+CGG | + | chr5.1:14421262-14421281 | None:intergenic | 70.0% |
!! | GGCACTGGTGTCATGCCGGG+AGG | - | chr5.1:14425166-14425185 | MS.gene68356:intron | 70.0% |
CGGTACGGGGGTGGGTGAGG+TGG | + | chr5.1:14421185-14421204 | None:intergenic | 75.0% | |
GTCTCCGGGGCGGGGCATGT+AGG | + | chr5.1:14421211-14421230 | None:intergenic | 75.0% | |
TGCGGGGGGTTCCGTCTCCG+GGG | + | chr5.1:14421224-14421243 | None:intergenic | 75.0% | |
! | GAGGGCCGATTCCGTCGCCG+GGG | + | chr5.1:14421260-14421279 | None:intergenic | 75.0% |
! | GTGGGTGAGGTGGTGGCGCG+TGG | + | chr5.1:14421175-14421194 | None:intergenic | 75.0% |
! | GGGGGGTTCCGTCTCCGGGG+CGG | + | chr5.1:14421221-14421240 | None:intergenic | 80.0% |
! | GGGGGTTCCGTCTCCGGGGC+GGG | + | chr5.1:14421220-14421239 | None:intergenic | 80.0% |
! | GGGGTTCCGTCTCCGGGGCG+GGG | + | chr5.1:14421219-14421238 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 14421129 | 14426292 | 14421129 | ID=MS.gene68356 |
chr5.1 | mRNA | 14421129 | 14426292 | 14421129 | ID=MS.gene68356.t1;Parent=MS.gene68356 |
chr5.1 | exon | 14425783 | 14426292 | 14425783 | ID=MS.gene68356.t1.exon1;Parent=MS.gene68356.t1 |
chr5.1 | CDS | 14425783 | 14426292 | 14425783 | ID=cds.MS.gene68356.t1;Parent=MS.gene68356.t1 |
chr5.1 | exon | 14423670 | 14423909 | 14423670 | ID=MS.gene68356.t1.exon2;Parent=MS.gene68356.t1 |
chr5.1 | CDS | 14423670 | 14423909 | 14423670 | ID=cds.MS.gene68356.t1;Parent=MS.gene68356.t1 |
chr5.1 | exon | 14422234 | 14422312 | 14422234 | ID=MS.gene68356.t1.exon3;Parent=MS.gene68356.t1 |
chr5.1 | CDS | 14422234 | 14422312 | 14422234 | ID=cds.MS.gene68356.t1;Parent=MS.gene68356.t1 |
chr5.1 | exon | 14421129 | 14421403 | 14421129 | ID=MS.gene68356.t1.exon4;Parent=MS.gene68356.t1 |
chr5.1 | CDS | 14421129 | 14421403 | 14421129 | ID=cds.MS.gene68356.t1;Parent=MS.gene68356.t1 |
Gene Sequence |
Protein sequence |