Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27219.t1 | XP_003629164.1 | 100 | 371 | 0 | 0 | 1 | 371 | 1 | 371 | 4.70E-209 | 736.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27219.t1 | Q8LFC0 | 83.7 | 369 | 57 | 1 | 3 | 371 | 2 | 367 | 1.5e-171 | 603.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27219.t1 | G7L9H2 | 100.0 | 371 | 0 | 0 | 1 | 371 | 1 | 371 | 3.4e-209 | 736.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049343 | MS.gene27219 | -0.809 | 2.35E-50 | -1.69E-46 |
MS.gene050905 | MS.gene27219 | 0.814041 | 1.89E-51 | -1.69E-46 |
MS.gene052358 | MS.gene27219 | 0.822992 | 1.76E-53 | -1.69E-46 |
MS.gene052519 | MS.gene27219 | -0.80037 | 1.49E-48 | -1.69E-46 |
MS.gene058498 | MS.gene27219 | -0.807924 | 3.99E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene27219 | MS.gene054629 | PPI |
MS.gene86974 | MS.gene27219 | PPI |
MS.gene27219 | MS.gene48488 | PPI |
MS.gene27219 | MS.gene064489 | PPI |
MS.gene27219 | MS.gene24619 | PPI |
MS.gene65298 | MS.gene27219 | PPI |
MS.gene27219 | MS.gene067451 | PPI |
MS.gene27219 | MS.gene029815 | PPI |
MS.gene27219 | MS.gene68356 | PPI |
MS.gene27219 | MS.gene38729 | PPI |
MS.gene27219 | MS.gene85935 | PPI |
MS.gene017544 | MS.gene27219 | PPI |
MS.gene27219 | MS.gene65298 | PPI |
MS.gene27219 | MS.gene23789 | PPI |
MS.gene27219 | MS.gene67551 | PPI |
MS.gene27219 | MS.gene83571 | PPI |
MS.gene27219 | MS.gene037818 | PPI |
MS.gene85935 | MS.gene27219 | PPI |
MS.gene38729 | MS.gene27219 | PPI |
MS.gene27219 | MS.gene64856 | PPI |
MS.gene27219 | MS.gene017544 | PPI |
MS.gene27219 | MS.gene055904 | PPI |
MS.gene27219 | MS.gene012996 | PPI |
MS.gene27219 | MS.gene86974 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27219.t1 | MTR_8g074030 | 100.000 | 371 | 0 | 0 | 1 | 371 | 1 | 371 | 0.0 | 764 |
MS.gene27219.t1 | MTR_8g074030 | 98.922 | 371 | 0 | 1 | 1 | 371 | 1 | 367 | 0.0 | 751 |
MS.gene27219.t1 | MTR_5g023740 | 88.949 | 371 | 37 | 1 | 1 | 371 | 1 | 367 | 0.0 | 676 |
MS.gene27219.t1 | MTR_5g023740 | 87.871 | 371 | 37 | 2 | 1 | 371 | 1 | 363 | 0.0 | 663 |
MS.gene27219.t1 | MTR_5g023740 | 89.680 | 281 | 25 | 1 | 1 | 281 | 1 | 277 | 0.0 | 518 |
MS.gene27219.t1 | MTR_5g023740 | 89.680 | 281 | 25 | 1 | 1 | 281 | 1 | 277 | 0.0 | 518 |
MS.gene27219.t1 | MTR_5g023740 | 88.256 | 281 | 25 | 2 | 1 | 281 | 1 | 273 | 0.0 | 505 |
MS.gene27219.t1 | MTR_1g064070 | 51.744 | 344 | 156 | 4 | 34 | 370 | 18 | 358 | 1.56e-118 | 348 |
MS.gene27219.t1 | MTR_3g101470 | 51.786 | 336 | 154 | 3 | 40 | 370 | 21 | 353 | 7.16e-118 | 346 |
MS.gene27219.t1 | MTR_2g104610 | 29.333 | 375 | 209 | 18 | 17 | 353 | 18 | 374 | 7.02e-27 | 110 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27219.t1 | AT4G35260 | 85.095 | 369 | 52 | 1 | 3 | 371 | 2 | 367 | 0.0 | 643 |
MS.gene27219.t1 | AT2G17130 | 82.927 | 369 | 60 | 1 | 3 | 371 | 2 | 367 | 0.0 | 627 |
MS.gene27219.t1 | AT4G35650 | 81.250 | 368 | 67 | 1 | 4 | 371 | 3 | 368 | 0.0 | 624 |
MS.gene27219.t1 | AT2G17130 | 81.843 | 369 | 60 | 2 | 3 | 371 | 2 | 363 | 0.0 | 614 |
MS.gene27219.t1 | AT5G03290 | 50.595 | 336 | 158 | 2 | 40 | 370 | 42 | 374 | 2.01e-116 | 343 |
MS.gene27219.t1 | AT3G09810 | 49.107 | 336 | 163 | 2 | 40 | 370 | 42 | 374 | 8.77e-111 | 328 |
MS.gene27219.t1 | AT1G32480 | 62.946 | 224 | 68 | 5 | 41 | 261 | 2 | 213 | 6.07e-93 | 277 |
MS.gene27219.t1 | AT1G80560 | 29.076 | 368 | 207 | 15 | 44 | 371 | 45 | 398 | 1.14e-29 | 118 |
MS.gene27219.t1 | AT5G14200 | 28.986 | 345 | 197 | 14 | 44 | 353 | 49 | 380 | 5.93e-29 | 116 |
MS.gene27219.t1 | AT5G14200 | 28.986 | 345 | 197 | 14 | 44 | 353 | 49 | 380 | 6.35e-29 | 116 |
MS.gene27219.t1 | AT1G31180 | 28.406 | 345 | 199 | 14 | 44 | 353 | 46 | 377 | 1.58e-27 | 112 |
MS.gene27219.t1 | AT1G31180 | 28.406 | 345 | 199 | 14 | 44 | 353 | 61 | 392 | 2.79e-27 | 112 |
MS.gene27219.t1 | AT5G14200 | 26.891 | 238 | 137 | 9 | 44 | 250 | 49 | 280 | 2.95e-11 | 64.3 |
Find 107 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGAATAAGGTTTGTCTTAA+AGG | 0.160532 | 8.3:-28962312 | MS.gene27219:CDS |
CGATCCCGTCGCCGGGGATT+AGG | 0.172397 | 8.3:+28962460 | None:intergenic |
ACGTTGATATTGTAGTTATT+AGG | 0.239338 | 8.3:-28962164 | MS.gene27219:CDS |
CTAGATTTCCATACAGGTTT+GGG | 0.266073 | 8.3:+28959478 | None:intergenic |
CGTTGATATTGTAGTTATTA+GGG | 0.273382 | 8.3:-28962163 | MS.gene27219:CDS |
TGAATCGATCCGTAAGAATA+AGG | 0.290840 | 8.3:-28962325 | MS.gene27219:CDS |
TCACTTGCTTTCTGTTGTTC+AGG | 0.298640 | 8.3:+28960776 | None:intergenic |
AATACTGCAGCTGGCATTGC+TGG | 0.307925 | 8.3:-28959450 | MS.gene27219:CDS |
ATTTCGTTGTATTTAATTCC+AGG | 0.346017 | 8.3:+28960673 | None:intergenic |
GGGATTAGGGTTACGGGACG+GGG | 0.348439 | 8.3:+28962474 | None:intergenic |
TTACTGCATCGACAACTTCT+TGG | 0.351267 | 8.3:+28958044 | None:intergenic |
GCTTGCAGATGGTTTGTTCT+TGG | 0.354766 | 8.3:-28960725 | MS.gene27219:CDS |
CTTGAACATGAGGTTGTTCC+CGG | 0.354977 | 8.3:-28962114 | MS.gene27219:CDS |
GCTGGCATTGCTGGAGGCAC+TGG | 0.356515 | 8.3:-28959441 | MS.gene27219:CDS |
GATCCCGTCGCCGGGGATTA+GGG | 0.361349 | 8.3:+28962461 | None:intergenic |
GCTTCATTATATTTGCTTTG+TGG | 0.364344 | 8.3:+28960746 | None:intergenic |
AGGTGGATTGGTTACTCCTA+TGG | 0.365893 | 8.3:-28962292 | MS.gene27219:CDS |
GGGGATTAGGGTTACGGGAC+GGG | 0.371488 | 8.3:+28962473 | None:intergenic |
ACTAGATTTCCATACAGGTT+TGG | 0.377752 | 8.3:+28959477 | None:intergenic |
GGTCAGCAAATGCAGGAAAC+TGG | 0.384422 | 8.3:+28958143 | None:intergenic |
TCCTGCATTTGCTGACCGTT+TGG | 0.391960 | 8.3:-28958137 | MS.gene27219:CDS |
TCGAATTTCTCAAAGTAAAC+TGG | 0.397465 | 8.3:+28962387 | None:intergenic |
GAATGGTTCGGATTGGGATC+GGG | 0.408930 | 8.3:+28962548 | None:intergenic |
TACTGCATCGACAACTTCTT+GGG | 0.411456 | 8.3:+28958045 | None:intergenic |
GGGTTGAGAGGAGGTGTTTG+AGG | 0.411998 | 8.3:+28962568 | None:intergenic |
TGAGAGGAGGTGTTTGAGGA+GGG | 0.412665 | 8.3:+28962572 | None:intergenic |
GTCGCCGGGGATTAGGGTTA+CGG | 0.426544 | 8.3:+28962467 | None:intergenic |
TAAGACAAACCTTATTCTTA+CGG | 0.426710 | 8.3:+28962316 | None:intergenic |
TGAATGGTTCGGATTGGGAT+CGG | 0.435193 | 8.3:+28962547 | None:intergenic |
TTGCAACTAGATTTCCATAC+AGG | 0.437374 | 8.3:+28959472 | None:intergenic |
GGGATCGGCCCACTCGTAAC+CGG | 0.440880 | 8.3:-28962444 | MS.gene27219:CDS |
CGGTGTCGTCGAAAGTCTTA+AGG | 0.445057 | 8.3:-28962094 | MS.gene27219:intron |
GAGGTGTTTGAGGAGGGGTA+TGG | 0.448718 | 8.3:+28962578 | None:intergenic |
GGATTAGGGTTACGGGACGG+GGG | 0.451332 | 8.3:+28962475 | None:intergenic |
TTGAGAGGAGGTGTTTGAGG+AGG | 0.452501 | 8.3:+28962571 | None:intergenic |
ATGGATCTTCTTGTTGCCAT+TGG | 0.453390 | 8.3:+28962597 | None:intergenic |
CGGCGCCGTTGAGCAACTAA+TGG | 0.458955 | 8.3:-28962424 | MS.gene27219:CDS |
TTTGAGCAGGGTGCTTCAGC+AGG | 0.462492 | 8.3:-28958253 | MS.gene27219:CDS |
AGTGGGCCGATCCCGTCGCC+GGG | 0.472280 | 8.3:+28962453 | None:intergenic |
TCGCCGGGGATTAGGGTTAC+GGG | 0.472697 | 8.3:+28962468 | None:intergenic |
GATGGTGAATGGTTCGGATT+GGG | 0.474079 | 8.3:+28962542 | None:intergenic |
GAGTGGGCCGATCCCGTCGC+CGG | 0.474941 | 8.3:+28962452 | None:intergenic |
TGAGCATGCTGTGTTTGAGC+AGG | 0.476481 | 8.3:-28958266 | MS.gene27219:CDS |
TTAAGACTTTCGACGACACC+GGG | 0.476912 | 8.3:+28962096 | None:intergenic |
TCTCATCAGCTATGATGCTT+AGG | 0.477441 | 8.3:-28958171 | MS.gene27219:CDS |
CTAGTTGCAAATACTGCAGC+TGG | 0.478154 | 8.3:-28959459 | MS.gene27219:CDS |
GATGAGAGAAGAAGCGCCAC+TGG | 0.479561 | 8.3:+28958187 | None:intergenic |
AGATGGTGAATGGTTCGGAT+TGG | 0.479659 | 8.3:+28962541 | None:intergenic |
TTTAATTCCAGGATACTTTG+TGG | 0.480739 | 8.3:+28960684 | None:intergenic |
GGAGGCACTGGAGTCATGCC+AGG | 0.483629 | 8.3:-28959429 | MS.gene27219:CDS |
AATAAGGTTTGTCTTAAAGG+TGG | 0.484570 | 8.3:-28962309 | MS.gene27219:CDS |
GGTTTGTCTTAAAGGTGGAT+TGG | 0.488656 | 8.3:-28962304 | MS.gene27219:CDS |
TAACCCTAATCCCCGGCGAC+GGG | 0.492476 | 8.3:-28962464 | MS.gene27219:CDS |
CTTAAGACTTTCGACGACAC+CGG | 0.493025 | 8.3:+28962095 | None:intergenic |
TCCAAACGGTCAGCAAATGC+AGG | 0.494673 | 8.3:+28958136 | None:intergenic |
CATTAGTTGCTCAACGGCGC+CGG | 0.494753 | 8.3:+28962425 | None:intergenic |
GATTAGGGTTACGGGACGGG+GGG | 0.495755 | 8.3:+28962476 | None:intergenic |
TTTGAGAAATTCGACGTACA+TGG | 0.504755 | 8.3:-28962378 | MS.gene27219:CDS |
GCCCGAGCAGTTTGATGTCA+TGG | 0.512416 | 8.3:-28960614 | MS.gene27219:intron |
CTAATCCCCGGCGACGGGAT+CGG | 0.517163 | 8.3:-28962459 | MS.gene27219:CDS |
TACCATGACATCAAACTGCT+CGG | 0.517965 | 8.3:+28960612 | None:intergenic |
TAAATACAACGAAATTATTG+TGG | 0.523864 | 8.3:-28960665 | MS.gene27219:CDS |
GAAGTTGCCACAAAGTATCC+TGG | 0.527999 | 8.3:-28960691 | MS.gene27219:CDS |
TTGGTTACTCCTATGGGTGG+TGG | 0.528515 | 8.3:-28962285 | MS.gene27219:CDS |
GGTGGATTGGTTACTCCTAT+GGG | 0.530483 | 8.3:-28962291 | MS.gene27219:CDS |
TAGGTTACCCCAAACCTGTA+TGG | 0.532200 | 8.3:-28959486 | MS.gene27219:CDS |
GAGAGGAGGTGTTTGAGGAG+GGG | 0.532450 | 8.3:+28962573 | None:intergenic |
CGCTTCCATTAGTTGCTCAA+CGG | 0.535249 | 8.3:+28962419 | None:intergenic |
TACATGCACCGTCCCGGCGA+CGG | 0.545739 | 8.3:-28962501 | MS.gene27219:CDS |
AATACTGAAGGGGAGTATGC+TGG | 0.554823 | 8.3:-28962138 | MS.gene27219:CDS |
CGGGGATTAGGGTTACGGGA+CGG | 0.556243 | 8.3:+28962472 | None:intergenic |
GGTGCTTCAGCAGGAAATGT+TGG | 0.556712 | 8.3:-28958244 | MS.gene27219:CDS |
AAGTATCGGACAAAGGATCT+TGG | 0.558261 | 8.3:-28958082 | MS.gene27219:CDS |
GTTATTAGGGAGAATACTGA+AGG | 0.561297 | 8.3:-28962150 | MS.gene27219:CDS |
AATATAATGAAGCTTGCAGA+TGG | 0.561935 | 8.3:-28960736 | MS.gene27219:CDS |
ACCATGACATCAAACTGCTC+GGG | 0.568329 | 8.3:+28960613 | None:intergenic |
TGCATCGACAACTTCTTGGG+TGG | 0.570042 | 8.3:+28958048 | None:intergenic |
GTAACCCTAATCCCCGGCGA+CGG | 0.570101 | 8.3:-28962465 | MS.gene27219:CDS |
GAGCATGCTGTGTTTGAGCA+GGG | 0.577817 | 8.3:-28958265 | MS.gene27219:CDS |
TCAACGGCGCCGGTTACGAG+TGG | 0.578394 | 8.3:+28962435 | None:intergenic |
TTATTAGGGAGAATACTGAA+GGG | 0.584736 | 8.3:-28962149 | MS.gene27219:CDS |
ATTGGGATCGGGTTGAGAGG+AGG | 0.584800 | 8.3:+28962559 | None:intergenic |
GTAACCTACATGCACCGTCC+CGG | 0.585438 | 8.3:-28962507 | MS.gene27219:CDS |
CGGATTGGGATCGGGTTGAG+AGG | 0.596796 | 8.3:+28962556 | None:intergenic |
TATCGGACAAAGGATCTTGG+AGG | 0.597549 | 8.3:-28958079 | MS.gene27219:CDS |
CAACGGCGCCGGTTACGAGT+GGG | 0.604840 | 8.3:+28962436 | None:intergenic |
TCATTCTAGAGGGCAAGTAT+CGG | 0.606553 | 8.3:-28958096 | MS.gene27219:CDS |
ATGAGAGAAGAAGCGCCACT+GGG | 0.614739 | 8.3:+28958188 | None:intergenic |
GTTCGCTTAATGTTCAGTTG+AGG | 0.618363 | 8.3:-28962257 | MS.gene27219:CDS |
TATTAGGGAGAATACTGAAG+GGG | 0.622910 | 8.3:-28962148 | MS.gene27219:CDS |
TAGATTTCCATACAGGTTTG+GGG | 0.624475 | 8.3:+28959479 | None:intergenic |
TCAACGTTATCATGTCGAGT+AGG | 0.631397 | 8.3:+28962180 | None:intergenic |
ACTGCAGCTGGCATTGCTGG+AGG | 0.631533 | 8.3:-28959447 | MS.gene27219:CDS |
TCATGTCGAGTAGGTAACCC+AGG | 0.633861 | 8.3:+28962189 | None:intergenic |
GAACTAACACCACCACCCAT+AGG | 0.634743 | 8.3:+28962276 | None:intergenic |
GTATGCTGGTCTTGAACATG+AGG | 0.635401 | 8.3:-28962124 | MS.gene27219:CDS |
GTCGCCGGGACGGTGCATGT+AGG | 0.635610 | 8.3:+28962503 | None:intergenic |
CGTCCCGTAACCCTAATCCC+CGG | 0.639953 | 8.3:-28962471 | MS.gene27219:CDS |
ATCGGACAAAGGATCTTGGA+GGG | 0.644506 | 8.3:-28958078 | MS.gene27219:CDS |
GGATTGGTTACTCCTATGGG+TGG | 0.645378 | 8.3:-28962288 | MS.gene27219:CDS |
TGACATGAAAGCTGTACCTA+CGG | 0.647259 | 8.3:-28962355 | MS.gene27219:CDS |
AGAGGGCAAGTATCGGACAA+AGG | 0.667139 | 8.3:-28958089 | MS.gene27219:CDS |
GTGGGCCGATCCCGTCGCCG+GGG | 0.685533 | 8.3:+28962454 | None:intergenic |
TGTTGGTAATGAGAAAGTAG+CGG | 0.689933 | 8.3:-28958227 | MS.gene27219:CDS |
GGCACTGGAGTCATGCCAGG+AGG | 0.693153 | 8.3:-28959426 | MS.gene27219:intron |
ATCGATTCAAGAACTTCCGT+AGG | 0.726256 | 8.3:+28962339 | None:intergenic |
ACAAAAGACAGCTAACCCAG+TGG | 0.753214 | 8.3:-28958203 | MS.gene27219:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAAAATCATTAAATTCT+TGG | - | chr8.3:28958725-28958744 | MS.gene27219:intron | 10.0% |
!! | ACTGTAAATTAAAATTTAAA+TGG | + | chr8.3:28961753-28961772 | None:intergenic | 10.0% |
!! | ATACAAATATTTGAAAAATA+AGG | - | chr8.3:28959633-28959652 | MS.gene27219:intron | 10.0% |
!! | CTGTAAATTAAAATTTAAAT+GGG | + | chr8.3:28961752-28961771 | None:intergenic | 10.0% |
!!! | CCTTTATTTAATTTTTTTTA+GGG | + | chr8.3:28962084-28962103 | None:intergenic | 10.0% |
!!! | TAAACAAAGTTAAATATTTT+TGG | + | chr8.3:28962007-28962026 | None:intergenic | 10.0% |
!!! | TCCTTTATTTAATTTTTTTT+AGG | + | chr8.3:28962085-28962104 | None:intergenic | 10.0% |
!! | AAAAAATTAAATAAAGGACT+AGG | - | chr8.3:28962087-28962106 | MS.gene27219:intron | 15.0% |
!! | ACTTAATAATAAGAGAAATA+AGG | - | chr8.3:28961883-28961902 | MS.gene27219:intron | 15.0% |
!! | CCCTAAAAAAAATTAAATAA+AGG | - | chr8.3:28962081-28962100 | MS.gene27219:intron | 15.0% |
!! | TTAATATTCATTACTATACA+TGG | + | chr8.3:28958928-28958947 | None:intergenic | 15.0% |
!! | TTACATTTATTTCAATATGT+CGG | - | chr8.3:28961915-28961934 | MS.gene27219:intron | 15.0% |
!!! | GGGTTAATTTTTTTATAAAT+TGG | + | chr8.3:28960857-28960876 | None:intergenic | 15.0% |
!!! | TGTTTTTAAAAATGAATAAG+TGG | + | chr8.3:28960824-28960843 | None:intergenic | 15.0% |
!! | AATTTCATAAATGATCTTGT+AGG | - | chr8.3:28958953-28958972 | MS.gene27219:intron | 20.0% |
!! | AGGGAAAGAAAATATTTAAA+AGG | + | chr8.3:28961277-28961296 | None:intergenic | 20.0% |
!! | ATAAGAACCAATATAATTTG+TGG | + | chr8.3:28959679-28959698 | None:intergenic | 20.0% |
!! | ATTTCATAAATGATCTTGTA+GGG | - | chr8.3:28958954-28958973 | MS.gene27219:intron | 20.0% |
!! | CCACAACAAAAAAAAATATT+AGG | + | chr8.3:28961950-28961969 | None:intergenic | 20.0% |
!! | TAAATACAACGAAATTATTG+TGG | - | chr8.3:28959956-28959975 | MS.gene27219:intron | 20.0% |
!!! | ATTTCTTTGTTTTTTGATTG+AGG | - | chr8.3:28958567-28958586 | MS.gene27219:intron | 20.0% |
!!! | ATTTTTCCTTTCTTTTCTAT+TGG | - | chr8.3:28960966-28960985 | MS.gene27219:intron | 20.0% |
!!! | CCTAATATTTTTTTTTGTTG+TGG | - | chr8.3:28961947-28961966 | MS.gene27219:intron | 20.0% |
!!! | TAAGAACCAATATAATTTGT+GGG | + | chr8.3:28959678-28959697 | None:intergenic | 20.0% |
!!! | TAGTTTATTTCTTAATTGTG+TGG | - | chr8.3:28958979-28958998 | MS.gene27219:intron | 20.0% |
!!! | TTAATTGTTTTAATCTTCCT+GGG | - | chr8.3:28958415-28958434 | MS.gene27219:intron | 20.0% |
! | AAGAATAAGGTTTGTCTTAA+AGG | - | chr8.3:28958309-28958328 | MS.gene27219:intron | 25.0% |
! | AATATGCCAAAAATTCATGA+AGG | - | chr8.3:28961783-28961802 | MS.gene27219:intron | 25.0% |
! | AATTGTGTGGTTTCTTAAAA+AGG | - | chr8.3:28958992-28959011 | MS.gene27219:intron | 25.0% |
! | ACGTTGATATTGTAGTTATT+AGG | - | chr8.3:28958457-28958476 | MS.gene27219:intron | 25.0% |
! | ACTTATTTCCATTCCTAAAT+GGG | - | chr8.3:28962135-28962154 | MS.gene27219:CDS | 25.0% |
! | ATACTGAAGTCATTAATTGT+CGG | + | chr8.3:28960136-28960155 | None:intergenic | 25.0% |
! | ATTTCGTTGTATTTAATTCC+AGG | + | chr8.3:28959951-28959970 | None:intergenic | 25.0% |
! | CAACTTAAATTAACCTTGAA+TGG | - | chr8.3:28959287-28959306 | MS.gene27219:intron | 25.0% |
! | CATCATAGATTAAAGAAAAG+TGG | + | chr8.3:28960047-28960066 | None:intergenic | 25.0% |
! | CATTCAAGGTTAATTTAAGT+TGG | + | chr8.3:28959289-28959308 | None:intergenic | 25.0% |
! | CATTGGAAACTAATTTGAAA+TGG | - | chr8.3:28959491-28959510 | MS.gene27219:intron | 25.0% |
! | CGTTGATATTGTAGTTATTA+GGG | - | chr8.3:28958458-28958477 | MS.gene27219:intron | 25.0% |
! | CTGTTAGACTATTTAAAGAT+AGG | + | chr8.3:28961527-28961546 | None:intergenic | 25.0% |
! | GAAAATAGATGTATTACAGA+AGG | - | chr8.3:28959180-28959199 | MS.gene27219:intron | 25.0% |
! | TAAAAATGAATAAGTGGCTT+TGG | + | chr8.3:28960818-28960837 | None:intergenic | 25.0% |
! | TAACTCTATTAACTCATTTC+AGG | + | chr8.3:28958800-28958819 | None:intergenic | 25.0% |
! | TAAGACAAACCTTATTCTTA+CGG | + | chr8.3:28958308-28958327 | None:intergenic | 25.0% |
! | TCTTATAGTTCTTAACTTTC+AGG | + | chr8.3:28960325-28960344 | None:intergenic | 25.0% |
!! | ACAACATCAATTTAAAACCT+TGG | - | chr8.3:28959453-28959472 | MS.gene27219:CDS | 25.0% |
!! | CACTTTTCTTTAATCTATGA+TGG | - | chr8.3:28960045-28960064 | MS.gene27219:intron | 25.0% |
!! | GTCTTATCTATATTTCTACT+TGG | + | chr8.3:28958778-28958797 | None:intergenic | 25.0% |
!! | TTTTAATCCAAATATTACCC+TGG | + | chr8.3:28959525-28959544 | None:intergenic | 25.0% |
!!! | AACAAAAAAAGTACTGAATC+TGG | + | chr8.3:28959561-28959580 | None:intergenic | 25.0% |
!!! | CACAATTTGTTTCTGATTTT+TGG | - | chr8.3:28961066-28961085 | MS.gene27219:intron | 25.0% |
!!! | GTTAATTGTTTTAATCTTCC+TGG | - | chr8.3:28958414-28958433 | MS.gene27219:intron | 25.0% |
!!! | GTTTGCATAAATCTTTTTTG+AGG | - | chr8.3:28961686-28961705 | MS.gene27219:intron | 25.0% |
!!! | TAAAGAAGTTGATATGAACT+CGG | + | chr8.3:28961490-28961509 | None:intergenic | 25.0% |
!!! | TATATGAAATATGATGATGG+TGG | - | chr8.3:28962177-28962196 | MS.gene27219:CDS | 25.0% |
!!! | TATTGGTTCTTATTTTCCAT+TGG | - | chr8.3:28959686-28959705 | MS.gene27219:intron | 25.0% |
!!! | TTTAAATGGGTTATCATGTA+AGG | + | chr8.3:28961739-28961758 | None:intergenic | 25.0% |
!!! | TTTGACTTGATATTTTTGGT+AGG | - | chr8.3:28959767-28959786 | MS.gene27219:intron | 25.0% |
AAATTCCAGACATACCTTAA+AGG | + | chr8.3:28960702-28960721 | None:intergenic | 30.0% | |
AACCTAGATAGATATTCCAA+TGG | + | chr8.3:28959705-28959724 | None:intergenic | 30.0% | |
AACCTTCCCACAAATTATAT+TGG | - | chr8.3:28959669-28959688 | MS.gene27219:intron | 30.0% | |
AATAAGGTTTGTCTTAAAGG+TGG | - | chr8.3:28958312-28958331 | MS.gene27219:intron | 30.0% | |
AATATAATGAAGCTTGCAGA+TGG | - | chr8.3:28959885-28959904 | MS.gene27219:intron | 30.0% | |
ATAATCAGATCAAAGCTCTA+AGG | + | chr8.3:28961250-28961269 | None:intergenic | 30.0% | |
ATACAGAGATAGAAATAGAC+GGG | - | chr8.3:28961625-28961644 | MS.gene27219:intron | 30.0% | |
ATCAACTTAGAAATGAGTCA+AGG | - | chr8.3:28960154-28960173 | MS.gene27219:intron | 30.0% | |
ATCTATCTACACATGAACAA+GGG | + | chr8.3:28960634-28960653 | None:intergenic | 30.0% | |
ATTACCTGCAAAAAAAGACA+TGG | + | chr8.3:28962327-28962346 | None:intergenic | 30.0% | |
ATTTGGATGTAGAAGTTTAG+AGG | - | chr8.3:28960718-28960737 | MS.gene27219:CDS | 30.0% | |
CTAACAGACTAATATGCAAT+GGG | - | chr8.3:28961540-28961559 | MS.gene27219:intron | 30.0% | |
CTTAGACCAATAGAAAAGAA+AGG | + | chr8.3:28960975-28960994 | None:intergenic | 30.0% | |
CTTATTTCCATTCCTAAATG+GGG | - | chr8.3:28962136-28962155 | MS.gene27219:CDS | 30.0% | |
GACTTATTTCCATTCCTAAA+TGG | - | chr8.3:28962134-28962153 | MS.gene27219:CDS | 30.0% | |
GATACAGAGATAGAAATAGA+CGG | - | chr8.3:28961624-28961643 | MS.gene27219:intron | 30.0% | |
GCTTCATTATATTTGCTTTG+TGG | + | chr8.3:28959878-28959897 | None:intergenic | 30.0% | |
GGCTATATGAAATATGATGA+TGG | - | chr8.3:28962174-28962193 | MS.gene27219:CDS | 30.0% | |
GGTTCTTAAGTATTCAACAT+TGG | - | chr8.3:28959474-28959493 | MS.gene27219:CDS | 30.0% | |
GTACTTTGTGGAATATTGAA+GGG | - | chr8.3:28960935-28960954 | MS.gene27219:intron | 30.0% | |
GTTGAAAAAGTCATTCTAGA+GGG | - | chr8.3:28962515-28962534 | MS.gene27219:CDS | 30.0% | |
TAACAATTACCAGATGCTAT+CGG | + | chr8.3:28960418-28960437 | None:intergenic | 30.0% | |
TACTTTGTGGAATATTGAAG+GGG | - | chr8.3:28960936-28960955 | MS.gene27219:intron | 30.0% | |
TATACAAGTATGTCCTGAAA+CGG | + | chr8.3:28959616-28959635 | None:intergenic | 30.0% | |
TATAGAGAGTAGATAAGACT+CGG | + | chr8.3:28960497-28960516 | None:intergenic | 30.0% | |
TATCTATCTACACATGAACA+AGG | + | chr8.3:28960635-28960654 | None:intergenic | 30.0% | |
TCAAGCACAAACAAAAAAGA+TGG | + | chr8.3:28960093-28960112 | None:intergenic | 30.0% | |
TCCTTTCTTTCTGTTTGAAA+AGG | - | chr8.3:28960758-28960777 | MS.gene27219:CDS | 30.0% | |
TCGAATTTCTCAAAGTAAAC+TGG | + | chr8.3:28958237-28958256 | None:intergenic | 30.0% | |
TCTAACAGACTAATATGCAA+TGG | - | chr8.3:28961539-28961558 | MS.gene27219:intron | 30.0% | |
TCTGATAACATGGTAAAAGA+GGG | + | chr8.3:28961296-28961315 | None:intergenic | 30.0% | |
TGAAAAACCTATAGCAAAAC+AGG | + | chr8.3:28960234-28960253 | None:intergenic | 30.0% | |
TGTACTTTGTGGAATATTGA+AGG | - | chr8.3:28960934-28960953 | MS.gene27219:intron | 30.0% | |
TGTTGAAAAAGTCATTCTAG+AGG | - | chr8.3:28962514-28962533 | MS.gene27219:CDS | 30.0% | |
TGTTGAATACTTAAGAACCA+AGG | + | chr8.3:28959473-28959492 | None:intergenic | 30.0% | |
TGTTGATCCATGTCATAAAA+GGG | + | chr8.3:28960576-28960595 | None:intergenic | 30.0% | |
TTAGATACGTATGTTTGCAA+GGG | - | chr8.3:28958898-28958917 | MS.gene27219:intron | 30.0% | |
TTATTAGGGAGAATACTGAA+GGG | - | chr8.3:28958472-28958491 | MS.gene27219:intron | 30.0% | |
TTATTTCCATTCCTAAATGG+GGG | - | chr8.3:28962137-28962156 | MS.gene27219:CDS | 30.0% | |
TTCCATTGGAATATCTATCT+AGG | - | chr8.3:28959700-28959719 | MS.gene27219:intron | 30.0% | |
TTGTTGATCCATGTCATAAA+AGG | + | chr8.3:28960577-28960596 | None:intergenic | 30.0% | |
TTTAATTCCAGGATACTTTG+TGG | + | chr8.3:28959940-28959959 | None:intergenic | 30.0% | |
TTTAGATACGTATGTTTGCA+AGG | - | chr8.3:28958897-28958916 | MS.gene27219:intron | 30.0% | |
TTTAGGAATGGAAATAAGTC+AGG | + | chr8.3:28962134-28962153 | None:intergenic | 30.0% | |
TTTGATTGAGGAGAAAAACA+TGG | - | chr8.3:28958579-28958598 | MS.gene27219:intron | 30.0% | |
TTTGGATGTAGAAGTTTAGA+GGG | - | chr8.3:28960719-28960738 | MS.gene27219:CDS | 30.0% | |
TTTGTTGGATGGATAAGTTA+GGG | + | chr8.3:28960895-28960914 | None:intergenic | 30.0% | |
! | AACCAATATAATTTGTGGGA+AGG | + | chr8.3:28959674-28959693 | None:intergenic | 30.0% |
! | ACTAATTTGAAATGGTGTCA+AGG | - | chr8.3:28959499-28959518 | MS.gene27219:intron | 30.0% |
! | CTACTACCTTCATGAATTTT+TGG | + | chr8.3:28961792-28961811 | None:intergenic | 30.0% |
! | TCCTTTTCAAACAGAAAGAA+AGG | + | chr8.3:28960762-28960781 | None:intergenic | 30.0% |
! | TTTAAGGTATGTCTGGAATT+TGG | - | chr8.3:28960701-28960720 | MS.gene27219:CDS | 30.0% |
! | TTTTATGACATGGATCAACA+AGG | - | chr8.3:28960576-28960595 | MS.gene27219:intron | 30.0% |
!! | AATTTAAGTTGGAACCTAAG+AGG | + | chr8.3:28959278-28959297 | None:intergenic | 30.0% |
!!! | AATTTTTTTTAGGGTGCCTA+TGG | + | chr8.3:28962075-28962094 | None:intergenic | 30.0% |
!!! | GTTGTTGTTGCTTTTTGATT+TGG | - | chr8.3:28958661-28958680 | MS.gene27219:intron | 30.0% |
!!! | TCTTTTTTTGCAGGTAATGT+TGG | - | chr8.3:28962329-28962348 | MS.gene27219:CDS | 30.0% |
AAAGAAAAACAAGAGCTGTG+TGG | - | chr8.3:28960190-28960209 | MS.gene27219:intron | 35.0% | |
ACTAGATTTCCATACAGGTT+TGG | + | chr8.3:28961147-28961166 | None:intergenic | 35.0% | |
ATAGTCTTCAACGACCTTTA+AGG | - | chr8.3:28960685-28960704 | MS.gene27219:CDS | 35.0% | |
ATCAACAAGGTTTGAATGTC+TGG | - | chr8.3:28960589-28960608 | MS.gene27219:intron | 35.0% | |
ATTTCACTAATCAGCACGTT+TGG | - | chr8.3:28959384-28959403 | MS.gene27219:intron | 35.0% | |
CAGAAACAAATTGTGAAGAC+CGG | + | chr8.3:28961061-28961080 | None:intergenic | 35.0% | |
CTAGATTTCCATACAGGTTT+GGG | + | chr8.3:28961146-28961165 | None:intergenic | 35.0% | |
CTCTAAGTAGACTAACAAAG+AGG | + | chr8.3:28961466-28961485 | None:intergenic | 35.0% | |
GAAAGGCTAAGAAAAACTGT+TGG | + | chr8.3:28960452-28960471 | None:intergenic | 35.0% | |
GCATCTGGTAATTGTTAACA+TGG | - | chr8.3:28960421-28960440 | MS.gene27219:intron | 35.0% | |
GGGTTTGATCTTAACTTACA+AGG | + | chr8.3:28960556-28960575 | None:intergenic | 35.0% | |
GGTTTGTGTTTGTGATTATC+AGG | + | chr8.3:28962306-28962325 | None:intergenic | 35.0% | |
GTCTGATAACATGGTAAAAG+AGG | + | chr8.3:28961297-28961316 | None:intergenic | 35.0% | |
GTTATTAGGGAGAATACTGA+AGG | - | chr8.3:28958471-28958490 | MS.gene27219:intron | 35.0% | |
GTTGTATCTCACATCAATGA+CGG | - | chr8.3:28959426-28959445 | MS.gene27219:intron | 35.0% | |
TAAATAAAGGACTAGGCCAT+AGG | - | chr8.3:28962094-28962113 | MS.gene27219:intron | 35.0% | |
TAAGCAAGAATCATTGCTGT+GGG | - | chr8.3:28960991-28961010 | MS.gene27219:intron | 35.0% | |
TAGATTTCCATACAGGTTTG+GGG | + | chr8.3:28961145-28961164 | None:intergenic | 35.0% | |
TATTAGGGAGAATACTGAAG+GGG | - | chr8.3:28958473-28958492 | MS.gene27219:intron | 35.0% | |
TATTATGTTCCGATAGCATC+TGG | - | chr8.3:28960406-28960425 | MS.gene27219:intron | 35.0% | |
TATTCACACGTCTGATAACA+TGG | + | chr8.3:28961306-28961325 | None:intergenic | 35.0% | |
TCAACAAGGTTTGAATGTCT+GGG | - | chr8.3:28960590-28960609 | MS.gene27219:intron | 35.0% | |
TCTTTCTGTTTGAAAAGGAG+AGG | - | chr8.3:28960763-28960782 | MS.gene27219:CDS | 35.0% | |
TGAATCGATCCGTAAGAATA+AGG | - | chr8.3:28958296-28958315 | MS.gene27219:intron | 35.0% | |
TTGCAACTAGATTTCCATAC+AGG | + | chr8.3:28961152-28961171 | None:intergenic | 35.0% | |
TTGTTGGATGGATAAGTTAG+GGG | + | chr8.3:28960894-28960913 | None:intergenic | 35.0% | |
TTTCTCTTTCCAAACCTCTT+AGG | - | chr8.3:28959261-28959280 | MS.gene27219:intron | 35.0% | |
TTTGAGAAATTCGACGTACA+TGG | - | chr8.3:28958243-28958262 | MS.gene27219:CDS | 35.0% | |
! | AGACTAATATGCAATGGGTT+AGG | - | chr8.3:28961545-28961564 | MS.gene27219:intron | 35.0% |
! | GATCAAACCCTTTTATGACA+TGG | - | chr8.3:28960566-28960585 | MS.gene27219:intron | 35.0% |
! | GATGTGAGATACAACGTTTT+GGG | + | chr8.3:28959421-28959440 | None:intergenic | 35.0% |
! | GCTTTTCTAGATGATTGTTC+TGG | - | chr8.3:28961365-28961384 | MS.gene27219:intron | 35.0% |
! | GTTTGTTGGATGGATAAGTT+AGG | + | chr8.3:28960896-28960915 | None:intergenic | 35.0% |
! | TGATGTGAGATACAACGTTT+TGG | + | chr8.3:28959422-28959441 | None:intergenic | 35.0% |
! | TGTTGTACTGATGCAGTATT+GGG | - | chr8.3:28959732-28959751 | MS.gene27219:intron | 35.0% |
! | TTGTTGTACTGATGCAGTAT+TGG | - | chr8.3:28959731-28959750 | MS.gene27219:intron | 35.0% |
! | TTTCAACAGCGTTTTCCAAA+CGG | + | chr8.3:28962502-28962521 | None:intergenic | 35.0% |
!! | AAACGTGCTGATTAGTGAAA+TGG | + | chr8.3:28959385-28959404 | None:intergenic | 35.0% |
!! | ATGAAATATGATGATGGTGG+TGG | - | chr8.3:28962180-28962199 | MS.gene27219:CDS | 35.0% |
!! | CATGATTCCTGTTTTGCTAT+AGG | - | chr8.3:28960224-28960243 | MS.gene27219:intron | 35.0% |
!! | TGTTGGTAATGAGAAAGTAG+CGG | - | chr8.3:28962394-28962413 | MS.gene27219:CDS | 35.0% |
!!! | CAAACCATGTCTTTTTTTGC+AGG | - | chr8.3:28962320-28962339 | MS.gene27219:CDS | 35.0% |
!!! | GCGGTTTGACTTGATATTTT+TGG | - | chr8.3:28959763-28959782 | MS.gene27219:intron | 35.0% |
!!! | TTTTGAGATGGTGAATGGTT+CGG | + | chr8.3:28958088-28958107 | None:intergenic | 35.0% |
AAAGTACATCTACATCCTCC+AGG | + | chr8.3:28960922-28960941 | None:intergenic | 40.0% | |
AACTTTCAGGACAATGTGCT+TGG | + | chr8.3:28960312-28960331 | None:intergenic | 40.0% | |
AAGTACATCTACATCCTCCA+GGG | + | chr8.3:28960921-28960940 | None:intergenic | 40.0% | |
AAGTTGGAACCTAAGAGGTT+TGG | + | chr8.3:28959273-28959292 | None:intergenic | 40.0% | |
ACTAATCAGCACGTTTGGTT+GGG | - | chr8.3:28959389-28959408 | MS.gene27219:intron | 40.0% | |
ACTTTCAGGACAATGTGCTT+GGG | + | chr8.3:28960311-28960330 | None:intergenic | 40.0% | |
AGAAGTTTAGAGGGAAGGTA+GGG | - | chr8.3:28960728-28960747 | MS.gene27219:CDS | 40.0% | |
ATGGATAAGTTAGGGGAGAA+AGG | + | chr8.3:28960887-28960906 | None:intergenic | 40.0% | |
CAATATGAGCCACAACATCA+CGG | - | chr8.3:28959025-28959044 | MS.gene27219:intron | 40.0% | |
CAATCAAAGGTTGGCAACAT+GGG | - | chr8.3:28960263-28960282 | MS.gene27219:intron | 40.0% | |
CCAACCTTTGATTGAACCAA+CGG | + | chr8.3:28960257-28960276 | None:intergenic | 40.0% | |
CTAAGCAAGAATCATTGCTG+TGG | - | chr8.3:28960990-28961009 | MS.gene27219:intron | 40.0% | |
CTAATACCCCCATTTAGGAA+TGG | + | chr8.3:28962146-28962165 | None:intergenic | 40.0% | |
GAAACGTACATGTAAGGAGA+AGG | + | chr8.3:28959328-28959347 | None:intergenic | 40.0% | |
GACAAAACCATCAAGACCTA+AGG | + | chr8.3:28961028-28961047 | None:intergenic | 40.0% | |
GAGGAAGAAACGTACATGTA+AGG | + | chr8.3:28959334-28959353 | None:intergenic | 40.0% | |
GAGGATGTAGATGTACTTTG+TGG | - | chr8.3:28960923-28960942 | MS.gene27219:intron | 40.0% | |
GAGGTCTCATATGATCAAAG+AGG | + | chr8.3:28961447-28961466 | None:intergenic | 40.0% | |
GATGTAGAAGTTTAGAGGGA+AGG | - | chr8.3:28960723-28960742 | MS.gene27219:CDS | 40.0% | |
GGCTAAGAAAAACTGTTGGT+TGG | + | chr8.3:28960448-28960467 | None:intergenic | 40.0% | |
GGTTTGTCTTAAAGGTGGAT+TGG | - | chr8.3:28958317-28958336 | MS.gene27219:intron | 40.0% | |
GTTCGCTTAATGTTCAGTTG+AGG | - | chr8.3:28958364-28958383 | MS.gene27219:intron | 40.0% | |
TACCATGACATCAAACTGCT+CGG | + | chr8.3:28960012-28960031 | None:intergenic | 40.0% | |
TAGAAGTTTAGAGGGAAGGT+AGG | - | chr8.3:28960727-28960746 | MS.gene27219:CDS | 40.0% | |
TCAACGTTATCATGTCGAGT+AGG | + | chr8.3:28958444-28958463 | None:intergenic | 40.0% | |
TCAATCAAAGGTTGGCAACA+TGG | - | chr8.3:28960262-28960281 | MS.gene27219:intron | 40.0% | |
TCACTTGCTTTCTGTTGTTC+AGG | + | chr8.3:28959848-28959867 | None:intergenic | 40.0% | |
TCATCAACCTTAGGTCTTGA+TGG | - | chr8.3:28961018-28961037 | MS.gene27219:intron | 40.0% | |
TCTCATCAGCTATGATGCTT+AGG | - | chr8.3:28962450-28962469 | MS.gene27219:CDS | 40.0% | |
TGACATGAAAGCTGTACCTA+CGG | - | chr8.3:28958266-28958285 | MS.gene27219:CDS | 40.0% | |
TGGATAAGTTAGGGGAGAAA+GGG | + | chr8.3:28960886-28960905 | None:intergenic | 40.0% | |
TTACAATTGCATATGCAGCC+AGG | + | chr8.3:28959362-28959381 | None:intergenic | 40.0% | |
! | ATCATGTCTCTCAGAAGTAC+TGG | + | chr8.3:28961607-28961626 | None:intergenic | 40.0% |
! | ATCGATTCAAGAACTTCCGT+AGG | + | chr8.3:28958285-28958304 | None:intergenic | 40.0% |
! | GCATACTTTTACCTTGTGCT+AGG | - | chr8.3:28961116-28961135 | MS.gene27219:intron | 40.0% |
! | TACTGCATCGACAACTTCTT+GGG | + | chr8.3:28962579-28962598 | None:intergenic | 40.0% |
! | TCATTCTAGAGGGCAAGTAT+CGG | - | chr8.3:28962525-28962544 | MS.gene27219:CDS | 40.0% |
! | TGCTATAGGTTTTTCACCGT+TGG | - | chr8.3:28960238-28960257 | MS.gene27219:intron | 40.0% |
! | TTACTGCATCGACAACTTCT+TGG | + | chr8.3:28962580-28962599 | None:intergenic | 40.0% |
! | TTGATGGCTTTCGATCTTGT+AGG | - | chr8.3:28959136-28959155 | MS.gene27219:intron | 40.0% |
!! | AACGACCTTTAAGGTATGTC+TGG | - | chr8.3:28960694-28960713 | MS.gene27219:CDS | 40.0% |
!! | AAGTATCGGACAAAGGATCT+TGG | - | chr8.3:28962539-28962558 | MS.gene27219:CDS | 40.0% |
!! | ACGTTTCTTCCTCTAAAACC+TGG | - | chr8.3:28959341-28959360 | MS.gene27219:intron | 40.0% |
!! | GGTTTTGTCTTGCAACTTAC+CGG | - | chr8.3:28961039-28961058 | MS.gene27219:intron | 40.0% |
!! | TGAAAGTACTCTTGGTAGGT+TGG | - | chr8.3:28962203-28962222 | MS.gene27219:CDS | 40.0% |
!! | TTCACCGTTGGTTCAATCAA+AGG | - | chr8.3:28960250-28960269 | MS.gene27219:intron | 40.0% |
!! | TTCCTAAATGGGGGTATTAG+TGG | - | chr8.3:28962146-28962165 | MS.gene27219:CDS | 40.0% |
!! | TTGTTGGGTTTAGGGCTTTT+GGG | - | chr8.3:28962232-28962251 | MS.gene27219:CDS | 40.0% |
!!! | CATCGTTTTGAGATGGTGAA+TGG | + | chr8.3:28958093-28958112 | None:intergenic | 40.0% |
ACAAAAGACAGCTAACCCAG+TGG | - | chr8.3:28962418-28962437 | MS.gene27219:CDS | 45.0% | |
ACCATGACATCAAACTGCTC+GGG | + | chr8.3:28960011-28960030 | None:intergenic | 45.0% | |
AGCATGTGTGAAGGAGAATG+TGG | + | chr8.3:28960529-28960548 | None:intergenic | 45.0% | |
AGCCACTAATACCCCCATTT+AGG | + | chr8.3:28962151-28962170 | None:intergenic | 45.0% | |
AGGTTGGCAACATGGGAAAA+AGG | - | chr8.3:28960270-28960289 | MS.gene27219:intron | 45.0% | |
ATCCATCCAACAAACAACCC+TGG | - | chr8.3:28960901-28960920 | MS.gene27219:intron | 45.0% | |
ATCGGACAAAGGATCTTGGA+GGG | - | chr8.3:28962543-28962562 | MS.gene27219:CDS | 45.0% | |
CAAGAATCATTGCTGTGGGT+TGG | - | chr8.3:28960995-28961014 | MS.gene27219:intron | 45.0% | |
CAAGGTTTGAGCATGTGTGA+AGG | + | chr8.3:28960538-28960557 | None:intergenic | 45.0% | |
CAATCGCTAGAGGAAGAGAA+AGG | + | chr8.3:28960469-28960488 | None:intergenic | 45.0% | |
CACTAATCAGCACGTTTGGT+TGG | - | chr8.3:28959388-28959407 | MS.gene27219:intron | 45.0% | |
CATCAAAAGCCGTGATGTTG+TGG | + | chr8.3:28959037-28959056 | None:intergenic | 45.0% | |
CGCTTCCATTAGTTGCTCAA+CGG | + | chr8.3:28958205-28958224 | None:intergenic | 45.0% | |
CTAGTTGCAAATACTGCAGC+TGG | - | chr8.3:28961162-28961181 | MS.gene27219:intron | 45.0% | |
CTTAAGACTTTCGACGACAC+CGG | + | chr8.3:28958529-28958548 | None:intergenic | 45.0% | |
CTTGAACATGAGGTTGTTCC+CGG | - | chr8.3:28958507-28958526 | MS.gene27219:intron | 45.0% | |
GAAGTTTAGAGGGAAGGTAG+GGG | - | chr8.3:28960729-28960748 | MS.gene27219:CDS | 45.0% | |
GCTAAATAGCCAGTGCTTCA+TGG | + | chr8.3:28961973-28961992 | None:intergenic | 45.0% | |
GTACATGTAAGGAGAAGGCA+TGG | + | chr8.3:28959323-28959342 | None:intergenic | 45.0% | |
GTCAAGGCCAGGGTAATATT+TGG | - | chr8.3:28959515-28959534 | MS.gene27219:intron | 45.0% | |
TAGGTTACCCCAAACCTGTA+TGG | - | chr8.3:28961135-28961154 | MS.gene27219:intron | 45.0% | |
TATCGGACAAAGGATCTTGG+AGG | - | chr8.3:28962542-28962561 | MS.gene27219:CDS | 45.0% | |
TGACGAAAAACCATACCTCC+TGG | + | chr8.3:28961213-28961232 | None:intergenic | 45.0% | |
TTAAGACTTTCGACGACACC+GGG | + | chr8.3:28958528-28958547 | None:intergenic | 45.0% | |
! | AAGTCTTATCCCACTAAGCG+GGG | + | chr8.3:28958637-28958656 | None:intergenic | 45.0% |
! | AATACTGAAGGGGAGTATGC+TGG | - | chr8.3:28958483-28958502 | MS.gene27219:intron | 45.0% |
! | AGATGGTGAATGGTTCGGAT+TGG | + | chr8.3:28958083-28958102 | None:intergenic | 45.0% |
! | CAAGTCTTATCCCACTAAGC+GGG | + | chr8.3:28958638-28958657 | None:intergenic | 45.0% |
! | CCAAGTCTTATCCCACTAAG+CGG | + | chr8.3:28958639-28958658 | None:intergenic | 45.0% |
! | CTAGTCTAGTTTGCCCAAGA+CGG | + | chr8.3:28962051-28962070 | None:intergenic | 45.0% |
! | GAAGTTGCCACAAAGTATCC+TGG | - | chr8.3:28959930-28959949 | MS.gene27219:intron | 45.0% |
! | GAGAGTAGATAAGACTCGGT+AGG | + | chr8.3:28960493-28960512 | None:intergenic | 45.0% |
! | GATGGTGAATGGTTCGGATT+GGG | + | chr8.3:28958082-28958101 | None:intergenic | 45.0% |
! | GCAGTATTGGGTTGTGTTTG+CGG | - | chr8.3:28959744-28959763 | MS.gene27219:intron | 45.0% |
! | TAGTCTAGTTTGCCCAAGAC+GGG | + | chr8.3:28962050-28962069 | None:intergenic | 45.0% |
! | TGAATGGTTCGGATTGGGAT+CGG | + | chr8.3:28958077-28958096 | None:intergenic | 45.0% |
! | TTGAAATGGTGTCAAGGCCA+GGG | - | chr8.3:28959505-28959524 | MS.gene27219:intron | 45.0% |
! | TTTGAAATGGTGTCAAGGCC+AGG | - | chr8.3:28959504-28959523 | MS.gene27219:intron | 45.0% |
!! | AGGTGGATTGGTTACTCCTA+TGG | - | chr8.3:28958329-28958348 | MS.gene27219:intron | 45.0% |
!! | CATATGCAGCCAGGTTTTAG+AGG | + | chr8.3:28959353-28959372 | None:intergenic | 45.0% |
!! | CCGTTGGTTCAATCAAAGGT+TGG | - | chr8.3:28960254-28960273 | MS.gene27219:intron | 45.0% |
!! | GCTTGCAGATGGTTTGTTCT+TGG | - | chr8.3:28959896-28959915 | MS.gene27219:intron | 45.0% |
!! | GGTGGATTGGTTACTCCTAT+GGG | - | chr8.3:28958330-28958349 | MS.gene27219:intron | 45.0% |
!! | GTATGCTGGTCTTGAACATG+AGG | - | chr8.3:28958497-28958516 | MS.gene27219:intron | 45.0% |
!! | GTGGTGAAAGTACTCTTGGT+AGG | - | chr8.3:28962199-28962218 | MS.gene27219:CDS | 45.0% |
!! | GTTGTTGGGTTTAGGGCTTT+TGG | - | chr8.3:28962231-28962250 | MS.gene27219:CDS | 45.0% |
!!! | GGTTACGCATCGTTTTGAGA+TGG | + | chr8.3:28958100-28958119 | None:intergenic | 45.0% |
AAATGTCTGACCACCCGTCT+TGG | - | chr8.3:28962034-28962053 | MS.gene27219:intron | 50.0% | |
AATACTGCAGCTGGCATTGC+TGG | - | chr8.3:28961171-28961190 | MS.gene27219:intron | 50.0% | |
AATGAGTCAAGGCTGACAGC+AGG | - | chr8.3:28960165-28960184 | MS.gene27219:intron | 50.0% | |
AATGTCTGACCACCCGTCTT+GGG | - | chr8.3:28962035-28962054 | MS.gene27219:intron | 50.0% | |
CATCAAAAGCCTCTTCCCTC+AGG | + | chr8.3:28959122-28959141 | None:intergenic | 50.0% | |
CATCCAACAAACAACCCTGG+AGG | - | chr8.3:28960904-28960923 | MS.gene27219:intron | 50.0% | |
CATCCTCCAGGGTTGTTTGT+TGG | + | chr8.3:28960910-28960929 | None:intergenic | 50.0% | |
CCCAGAGCAAAAGCTCTTGA+GGG | - | chr8.3:28959224-28959243 | MS.gene27219:intron | 50.0% | |
CCCAGAGCAAATTCTCCTGA+GGG | - | chr8.3:28959104-28959123 | MS.gene27219:intron | 50.0% | |
CCGCTTAGTGGGATAAGACT+TGG | - | chr8.3:28958636-28958655 | MS.gene27219:intron | 50.0% | |
CGTCTTGGGCAAACTAGACT+AGG | - | chr8.3:28962049-28962068 | MS.gene27219:intron | 50.0% | |
GAACTAACACCACCACCCAT+AGG | + | chr8.3:28958348-28958367 | None:intergenic | 50.0% | |
GAGCATGCTGTGTTTGAGCA+GGG | - | chr8.3:28962356-28962375 | MS.gene27219:CDS | 50.0% | |
GAGCTGTAGTCTACCGTTTC+AGG | - | chr8.3:28959600-28959619 | MS.gene27219:intron | 50.0% | |
GCAAAAGCTCTTGAGGGAAG+AGG | - | chr8.3:28959230-28959249 | MS.gene27219:intron | 50.0% | |
GCAAATTCTCCTGAGGGAAG+AGG | - | chr8.3:28959110-28959129 | MS.gene27219:intron | 50.0% | |
GGAGCTGGTTGTTGGGTTTA+GGG | - | chr8.3:28962224-28962243 | MS.gene27219:CDS | 50.0% | |
GGCAAACTAGACTAGGCCAT+AGG | - | chr8.3:28962056-28962075 | MS.gene27219:intron | 50.0% | |
GGTCAGCAAATGCAGGAAAC+TGG | + | chr8.3:28962481-28962500 | None:intergenic | 50.0% | |
GGTGCTTCAGCAGGAAATGT+TGG | - | chr8.3:28962377-28962396 | MS.gene27219:CDS | 50.0% | |
TAGGGGAGAAAGGGACTGAA+GGG | + | chr8.3:28960877-28960896 | None:intergenic | 50.0% | |
TCATGTCGAGTAGGTAACCC+AGG | + | chr8.3:28958435-28958454 | None:intergenic | 50.0% | |
TCCAAACGGTCAGCAAATGC+AGG | + | chr8.3:28962488-28962507 | None:intergenic | 50.0% | |
TGAGCATGCTGTGTTTGAGC+AGG | - | chr8.3:28962355-28962374 | MS.gene27219:CDS | 50.0% | |
TGGAGCTGGTTGTTGGGTTT+AGG | - | chr8.3:28962223-28962242 | MS.gene27219:CDS | 50.0% | |
TTAGGGGAGAAAGGGACTGA+AGG | + | chr8.3:28960878-28960897 | None:intergenic | 50.0% | |
TTGGTTACTCCTATGGGTGG+TGG | - | chr8.3:28958336-28958355 | MS.gene27219:intron | 50.0% | |
TTGTTGTGGCCATGAAGCAC+TGG | - | chr8.3:28961961-28961980 | MS.gene27219:intron | 50.0% | |
! | AAGGAGAAGGCATGGCAAGA+CGG | + | chr8.3:28959315-28959334 | None:intergenic | 50.0% |
! | CCCTCAAGAGCTTTTGCTCT+GGG | + | chr8.3:28959227-28959246 | None:intergenic | 50.0% |
! | CCCTCAGGAGAATTTGCTCT+GGG | + | chr8.3:28959107-28959126 | None:intergenic | 50.0% |
! | CCTCAAGAGCTTTTGCTCTG+GGG | + | chr8.3:28959226-28959245 | None:intergenic | 50.0% |
! | CCTCAGGAGAATTTGCTCTG+GGG | + | chr8.3:28959106-28959125 | None:intergenic | 50.0% |
! | CTCCAGGGTTGTTTGTTGGA+TGG | + | chr8.3:28960906-28960925 | None:intergenic | 50.0% |
! | CTGAGGGAAGAGGCTTTTGA+TGG | - | chr8.3:28959120-28959139 | MS.gene27219:intron | 50.0% |
! | GAATGGTTCGGATTGGGATC+GGG | + | chr8.3:28958076-28958095 | None:intergenic | 50.0% |
! | GTAGGTTGGAGCTGGTTGTT+GGG | - | chr8.3:28962217-28962236 | MS.gene27219:CDS | 50.0% |
! | GTTTGGGGTAACCTAGCACA+AGG | + | chr8.3:28961130-28961149 | None:intergenic | 50.0% |
! | TACTCTTGGTAGGTTGGAGC+TGG | - | chr8.3:28962209-28962228 | MS.gene27219:CDS | 50.0% |
! | TCCCTCAAGAGCTTTTGCTC+TGG | + | chr8.3:28959228-28959247 | None:intergenic | 50.0% |
! | TCCCTCAGGAGAATTTGCTC+TGG | + | chr8.3:28959108-28959127 | None:intergenic | 50.0% |
! | TCCTGCATTTGCTGACCGTT+TGG | - | chr8.3:28962484-28962503 | MS.gene27219:CDS | 50.0% |
! | TGCATCGACAACTTCTTGGG+TGG | + | chr8.3:28962576-28962595 | None:intergenic | 50.0% |
!! | AGAGGGCAAGTATCGGACAA+AGG | - | chr8.3:28962532-28962551 | MS.gene27219:CDS | 50.0% |
!! | ATGAGAGAAGAAGCGCCACT+GGG | + | chr8.3:28962436-28962455 | None:intergenic | 50.0% |
!! | ATGGGGGTATTAGTGGCTTG+TGG | - | chr8.3:28962153-28962172 | MS.gene27219:CDS | 50.0% |
!! | CGGTGTCGTCGAAAGTCTTA+AGG | - | chr8.3:28958527-28958546 | MS.gene27219:intron | 50.0% |
!! | GGATTGGTTACTCCTATGGG+TGG | - | chr8.3:28958333-28958352 | MS.gene27219:intron | 50.0% |
!! | GGTGGTGGTGAAAGTACTCT+TGG | - | chr8.3:28962195-28962214 | MS.gene27219:CDS | 50.0% |
!! | GTGGGTTGGTCATCAACCTT+AGG | - | chr8.3:28961009-28961028 | MS.gene27219:intron | 50.0% |
!! | TGAGAGGAGGTGTTTGAGGA+GGG | + | chr8.3:28958052-28958071 | None:intergenic | 50.0% |
!! | TTGAGAGGAGGTGTTTGAGG+AGG | + | chr8.3:28958053-28958072 | None:intergenic | 50.0% |
!!! | AGCTTTTGCTCTGGGGTTAC+AGG | + | chr8.3:28959219-28959238 | None:intergenic | 50.0% |
!!! | GCTTTTGCTCTGGGGTTACA+GGG | + | chr8.3:28959218-28959237 | None:intergenic | 50.0% |
ACTAGGCCATAGGCCTCAGT+CGG | - | chr8.3:28962104-28962123 | MS.gene27219:CDS | 55.0% | |
ATGTAGCTGACCCCGCTTAG+TGG | - | chr8.3:28958624-28958643 | MS.gene27219:intron | 55.0% | |
CATTAGTTGCTCAACGGCGC+CGG | + | chr8.3:28958199-28958218 | None:intergenic | 55.0% | |
CCCCAGAGCAAAAGCTCTTG+AGG | - | chr8.3:28959223-28959242 | MS.gene27219:intron | 55.0% | |
CCCCAGAGCAAATTCTCCTG+AGG | - | chr8.3:28959103-28959122 | MS.gene27219:intron | 55.0% | |
CTCGGTAGGTCAATCGCTAG+AGG | + | chr8.3:28960479-28960498 | None:intergenic | 55.0% | |
GCCCGAGCAGTTTGATGTCA+TGG | - | chr8.3:28960007-28960026 | MS.gene27219:intron | 55.0% | |
GTAACCTACATGCACCGTCC+CGG | - | chr8.3:28958114-28958133 | MS.gene27219:CDS | 55.0% | |
TGGAGTCATGCCAGGAGGTA+TGG | - | chr8.3:28961200-28961219 | MS.gene27219:intron | 55.0% | |
TGGCAAGACGGAGCCATTCA+AGG | + | chr8.3:28959303-28959322 | None:intergenic | 55.0% | |
TGTAGCTGACCCCGCTTAGT+GGG | - | chr8.3:28958625-28958644 | MS.gene27219:intron | 55.0% | |
! | GAGGTGTTTGAGGAGGGGTA+TGG | + | chr8.3:28958046-28958065 | None:intergenic | 55.0% |
! | GGTAGGTTGGAGCTGGTTGT+TGG | - | chr8.3:28962216-28962235 | MS.gene27219:CDS | 55.0% |
! | TAAGTCAGGTTGCCCGACTG+AGG | + | chr8.3:28962120-28962139 | None:intergenic | 55.0% |
! | TCTAGTTTGCCCAAGACGGG+TGG | + | chr8.3:28962047-28962066 | None:intergenic | 55.0% |
! | TTTGAGCAGGGTGCTTCAGC+AGG | - | chr8.3:28962368-28962387 | MS.gene27219:CDS | 55.0% |
!! | ATTGGGATCGGGTTGAGAGG+AGG | + | chr8.3:28958065-28958084 | None:intergenic | 55.0% |
!! | GAGAGGAGGTGTTTGAGGAG+GGG | + | chr8.3:28958051-28958070 | None:intergenic | 55.0% |
!! | GATGAGAGAAGAAGCGCCAC+TGG | + | chr8.3:28962437-28962456 | None:intergenic | 55.0% |
!! | GGGTTGAGAGGAGGTGTTTG+AGG | + | chr8.3:28958056-28958075 | None:intergenic | 55.0% |
ACTGCAGCTGGCATTGCTGG+AGG | - | chr8.3:28961174-28961193 | MS.gene27219:intron | 60.0% | |
CGGCGCCGTTGAGCAACTAA+TGG | - | chr8.3:28958197-28958216 | MS.gene27219:CDS | 60.0% | |
CGGGGATTAGGGTTACGGGA+CGG | + | chr8.3:28958152-28958171 | None:intergenic | 60.0% | |
CGTCCCGTAACCCTAATCCC+CGG | - | chr8.3:28958150-28958169 | MS.gene27219:CDS | 60.0% | |
CTAGGCCATAGGCCTCAGTC+GGG | - | chr8.3:28962105-28962124 | MS.gene27219:CDS | 60.0% | |
GATTAGGGTTACGGGACGGG+GGG | + | chr8.3:28958148-28958167 | None:intergenic | 60.0% | |
GGATTAGGGTTACGGGACGG+GGG | + | chr8.3:28958149-28958168 | None:intergenic | 60.0% | |
GGGATTAGGGTTACGGGACG+GGG | + | chr8.3:28958150-28958169 | None:intergenic | 60.0% | |
GGGGATTAGGGTTACGGGAC+GGG | + | chr8.3:28958151-28958170 | None:intergenic | 60.0% | |
GTAACCCTAATCCCCGGCGA+CGG | - | chr8.3:28958156-28958175 | MS.gene27219:CDS | 60.0% | |
GTCGCCGGGGATTAGGGTTA+CGG | + | chr8.3:28958157-28958176 | None:intergenic | 60.0% | |
TAACCCTAATCCCCGGCGAC+GGG | - | chr8.3:28958157-28958176 | MS.gene27219:CDS | 60.0% | |
TCGCCGGGGATTAGGGTTAC+GGG | + | chr8.3:28958156-28958175 | None:intergenic | 60.0% | |
!! | CGGATTGGGATCGGGTTGAG+AGG | + | chr8.3:28958068-28958087 | None:intergenic | 60.0% |
CTAATCCCCGGCGACGGGAT+CGG | - | chr8.3:28958162-28958181 | MS.gene27219:CDS | 65.0% | |
GATCCCGTCGCCGGGGATTA+GGG | + | chr8.3:28958163-28958182 | None:intergenic | 65.0% | |
GGGATCGGCCCACTCGTAAC+CGG | - | chr8.3:28958177-28958196 | MS.gene27219:CDS | 65.0% | |
GGTTGCCCGACTGAGGCCTA+TGG | + | chr8.3:28962113-28962132 | None:intergenic | 65.0% | |
TACATGCACCGTCCCGGCGA+CGG | - | chr8.3:28958120-28958139 | MS.gene27219:CDS | 65.0% | |
! | GCTGGCATTGCTGGAGGCAC+TGG | - | chr8.3:28961180-28961199 | MS.gene27219:intron | 65.0% |
! | GGCACTGGAGTCATGCCAGG+AGG | - | chr8.3:28961195-28961214 | MS.gene27219:intron | 65.0% |
!! | CAACGGCGCCGGTTACGAGT+GGG | + | chr8.3:28958188-28958207 | None:intergenic | 65.0% |
!! | GGAGGCACTGGAGTCATGCC+AGG | - | chr8.3:28961192-28961211 | MS.gene27219:intron | 65.0% |
!! | TCAACGGCGCCGGTTACGAG+TGG | + | chr8.3:28958189-28958208 | None:intergenic | 65.0% |
CGATCCCGTCGCCGGGGATT+AGG | + | chr8.3:28958164-28958183 | None:intergenic | 70.0% | |
GTCGCCGGGACGGTGCATGT+AGG | + | chr8.3:28958121-28958140 | None:intergenic | 70.0% | |
AGTGGGCCGATCCCGTCGCC+GGG | + | chr8.3:28958171-28958190 | None:intergenic | 75.0% | |
GAGTGGGCCGATCCCGTCGC+CGG | + | chr8.3:28958172-28958191 | None:intergenic | 75.0% | |
! | GGACGGGGGGTTCCGTCGCC+GGG | + | chr8.3:28958135-28958154 | None:intergenic | 80.0% |
! | GGGACGGGGGGTTCCGTCGC+CGG | + | chr8.3:28958136-28958155 | None:intergenic | 80.0% |
! | GGGGGGTTCCGTCGCCGGGA+CGG | + | chr8.3:28958131-28958150 | None:intergenic | 80.0% |
! | GTGGGCCGATCCCGTCGCCG+GGG | + | chr8.3:28958170-28958189 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 28958027 | 28962616 | 28958027 | ID=MS.gene27219 |
chr8.3 | mRNA | 28958027 | 28962616 | 28958027 | ID=MS.gene27219.t1;Parent=MS.gene27219 |
chr8.3 | exon | 28962095 | 28962616 | 28962095 | ID=MS.gene27219.t1.exon1;Parent=MS.gene27219.t1 |
chr8.3 | CDS | 28962095 | 28962616 | 28962095 | ID=cds.MS.gene27219.t1;Parent=MS.gene27219.t1 |
chr8.3 | exon | 28960615 | 28960854 | 28960615 | ID=MS.gene27219.t1.exon2;Parent=MS.gene27219.t1 |
chr8.3 | CDS | 28960615 | 28960854 | 28960615 | ID=cds.MS.gene27219.t1;Parent=MS.gene27219.t1 |
chr8.3 | exon | 28959427 | 28959505 | 28959427 | ID=MS.gene27219.t1.exon3;Parent=MS.gene27219.t1 |
chr8.3 | CDS | 28959427 | 28959505 | 28959427 | ID=cds.MS.gene27219.t1;Parent=MS.gene27219.t1 |
chr8.3 | exon | 28958027 | 28958301 | 28958027 | ID=MS.gene27219.t1.exon4;Parent=MS.gene27219.t1 |
chr8.3 | CDS | 28958027 | 28958301 | 28958027 | ID=cds.MS.gene27219.t1;Parent=MS.gene27219.t1 |
Gene Sequence |
Protein sequence |