Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64856.t1 | XP_003612317.1 | 98.6 | 367 | 5 | 0 | 1 | 367 | 1 | 367 | 6.10E-201 | 709.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64856.t1 | P93032 | 82.6 | 362 | 62 | 1 | 3 | 363 | 2 | 363 | 1.1e-166 | 587.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64856.t1 | G7K008 | 98.6 | 367 | 5 | 0 | 1 | 367 | 1 | 367 | 4.4e-201 | 709.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene64856 | MS.gene68356 | PPI |
MS.gene65298 | MS.gene64856 | PPI |
MS.gene64856 | MS.gene23789 | PPI |
MS.gene64856 | MS.gene67551 | PPI |
MS.gene64856 | MS.gene83571 | PPI |
MS.gene017544 | MS.gene64856 | PPI |
MS.gene23789 | MS.gene64856 | PPI |
MS.gene64856 | MS.gene055904 | PPI |
MS.gene64856 | MS.gene012996 | PPI |
MS.gene27219 | MS.gene64856 | PPI |
MS.gene85935 | MS.gene64856 | PPI |
MS.gene38729 | MS.gene64856 | PPI |
MS.gene64856 | MS.gene054629 | PPI |
MS.gene037818 | MS.gene64856 | PPI |
MS.gene64856 | MS.gene48488 | PPI |
MS.gene86974 | MS.gene64856 | PPI |
MS.gene055904 | MS.gene64856 | PPI |
MS.gene64856 | MS.gene064489 | PPI |
MS.gene64856 | MS.gene24619 | PPI |
MS.gene64856 | MS.gene067451 | PPI |
MS.gene64856 | MS.gene029815 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64856.t1 | MTR_5g023740 | 98.638 | 367 | 5 | 0 | 1 | 367 | 1 | 367 | 0.0 | 743 |
MS.gene64856.t1 | MTR_5g023740 | 97.548 | 367 | 5 | 1 | 1 | 367 | 1 | 363 | 0.0 | 729 |
MS.gene64856.t1 | MTR_8g074030 | 88.441 | 372 | 37 | 2 | 1 | 367 | 1 | 371 | 0.0 | 673 |
MS.gene64856.t1 | MTR_8g074030 | 87.366 | 372 | 37 | 3 | 1 | 367 | 1 | 367 | 0.0 | 660 |
MS.gene64856.t1 | MTR_5g023740 | 98.195 | 277 | 5 | 0 | 1 | 277 | 1 | 277 | 0.0 | 563 |
MS.gene64856.t1 | MTR_5g023740 | 98.195 | 277 | 5 | 0 | 1 | 277 | 1 | 277 | 0.0 | 562 |
MS.gene64856.t1 | MTR_5g023740 | 96.751 | 277 | 5 | 1 | 1 | 277 | 1 | 273 | 0.0 | 551 |
MS.gene64856.t1 | MTR_1g064070 | 48.634 | 366 | 174 | 5 | 6 | 366 | 2 | 358 | 1.03e-118 | 348 |
MS.gene64856.t1 | MTR_3g101470 | 48.732 | 355 | 169 | 3 | 17 | 366 | 7 | 353 | 1.35e-116 | 342 |
MS.gene64856.t1 | MTR_2g104610 | 29.132 | 357 | 197 | 15 | 32 | 349 | 35 | 374 | 7.26e-28 | 113 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64856.t1 | AT4G35260 | 84.973 | 366 | 54 | 1 | 3 | 367 | 2 | 367 | 0.0 | 637 |
MS.gene64856.t1 | AT4G35650 | 81.421 | 366 | 66 | 1 | 4 | 367 | 3 | 368 | 0.0 | 627 |
MS.gene64856.t1 | AT2G17130 | 81.967 | 366 | 65 | 1 | 3 | 367 | 2 | 367 | 0.0 | 617 |
MS.gene64856.t1 | AT2G17130 | 80.874 | 366 | 65 | 2 | 3 | 367 | 2 | 363 | 0.0 | 605 |
MS.gene64856.t1 | AT5G03290 | 51.190 | 336 | 156 | 2 | 36 | 366 | 42 | 374 | 1.75e-117 | 345 |
MS.gene64856.t1 | AT3G09810 | 51.190 | 336 | 156 | 4 | 36 | 366 | 42 | 374 | 8.08e-113 | 333 |
MS.gene64856.t1 | AT1G32480 | 62.500 | 224 | 69 | 5 | 37 | 257 | 2 | 213 | 1.16e-90 | 271 |
MS.gene64856.t1 | AT1G80560 | 29.630 | 351 | 197 | 13 | 40 | 354 | 45 | 381 | 1.48e-30 | 120 |
MS.gene64856.t1 | AT5G14200 | 28.792 | 389 | 224 | 16 | 1 | 349 | 5 | 380 | 1.59e-30 | 120 |
MS.gene64856.t1 | AT5G14200 | 28.792 | 389 | 224 | 16 | 1 | 349 | 5 | 380 | 1.63e-30 | 120 |
MS.gene64856.t1 | AT1G31180 | 28.974 | 390 | 223 | 16 | 1 | 349 | 1 | 377 | 2.74e-30 | 120 |
MS.gene64856.t1 | AT1G31180 | 28.974 | 390 | 223 | 16 | 1 | 349 | 16 | 392 | 4.45e-30 | 119 |
MS.gene64856.t1 | AT5G14200 | 26.596 | 282 | 165 | 10 | 1 | 246 | 5 | 280 | 3.38e-13 | 70.1 |
Find 107 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGATTCCGTCGCCGGGGATT+AGG | 0.169058 | 5.3:+13650588 | None:intergenic |
ATGTTGATATTGTTGTTATT+AGG | 0.236899 | 5.3:-13650292 | MS.gene64856:CDS |
GGGGATTAGGGTTACATTGC+GGG | 0.275523 | 5.3:+13650601 | None:intergenic |
TGTTGATATTGTTGTTATTA+GGG | 0.290952 | 5.3:-13650291 | MS.gene64856:CDS |
GCTTGCAGATGGTTTATTCT+TGG | 0.304514 | 5.3:-13648220 | MS.gene64856:CDS |
GATTCCGTCGCCGGGGATTA+GGG | 0.344303 | 5.3:+13650589 | None:intergenic |
GTGGGTGAGGTGGTGGCGCG+TGG | 0.349708 | 5.3:+13650667 | None:intergenic |
AACAAGATTTCCATAAAGAT+TGG | 0.353298 | 5.3:+13646723 | None:intergenic |
CTTGAACATGAGGTTGTTCC+CGG | 0.354977 | 5.3:-13650242 | MS.gene64856:CDS |
GCTTGTCAGTTGCTTTAATC+TGG | 0.358844 | 5.3:-13650339 | MS.gene64856:CDS |
AATACAGCGGCAGGCATTGC+TGG | 0.369556 | 5.3:-13646697 | MS.gene64856:CDS |
ATTTCATTATACTTGATTCC+AGG | 0.392374 | 5.3:+13648168 | None:intergenic |
ATCTGGAAGGATTGACTACT+AGG | 0.394728 | 5.3:-13650322 | MS.gene64856:CDS |
ACAAGATTTCCATAAAGATT+GGG | 0.395363 | 5.3:+13646724 | None:intergenic |
GGAATCGATTAAGAAGAATA+AGG | 0.408209 | 5.3:-13650453 | MS.gene64856:CDS |
GGGGTTCCGTCTCCGGGGCG+GGG | 0.409508 | 5.3:+13650623 | None:intergenic |
GGCATGTAGGTTACGGTACG+GGG | 0.414877 | 5.3:+13650644 | None:intergenic |
TCCAATCGTTCAGCAAATAC+AGG | 0.416645 | 5.3:+13645678 | None:intergenic |
GGGATTAGGGTTACATTGCG+GGG | 0.421936 | 5.3:+13650602 | None:intergenic |
ATGTCTTTGCAGGTAATGTT+GGG | 0.422079 | 5.3:-13645833 | MS.gene64856:intron |
GGAATCGGCCCTCTCGTAAC+CGG | 0.429953 | 5.3:-13650572 | MS.gene64856:CDS |
GGGCATGTAGGTTACGGTAC+GGG | 0.430343 | 5.3:+13650643 | None:intergenic |
CTTGATTCCAGGATACTTTG+TGG | 0.435276 | 5.3:+13648179 | None:intergenic |
TCCTGTATTTGCTGAACGAT+TGG | 0.436123 | 5.3:-13645679 | MS.gene64856:CDS |
GCAGGCATTGCTGGAGGCAC+TGG | 0.441704 | 5.3:-13646688 | MS.gene64856:CDS |
CTAATCCCCGGCGACGGAAT+CGG | 0.445934 | 5.3:-13650587 | MS.gene64856:CDS |
CGGGGATTAGGGTTACATTG+CGG | 0.449437 | 5.3:+13650600 | None:intergenic |
AAGAATAAGGTCTGTTTGAA+AGG | 0.455164 | 5.3:-13650440 | MS.gene64856:CDS |
GTCTCCGGGGCGGGGCATGT+AGG | 0.455315 | 5.3:+13650631 | None:intergenic |
TCGAATTTCTCGAAGTGCAC+TGG | 0.458066 | 5.3:+13650515 | None:intergenic |
GGAGGCACTGGTGTCATGCC+GGG | 0.461037 | 5.3:-13646676 | MS.gene64856:CDS |
TACTGCATCAACAACCTCTT+GGG | 0.461914 | 5.3:+13645587 | None:intergenic |
GGGTGGTGCTTGTCCCTCCA+AGG | 0.470554 | 5.3:+13645607 | None:intergenic |
ATCGATTCCATCACTTCAGA+TGG | 0.475497 | 5.3:+13650467 | None:intergenic |
TTACTGCATCAACAACCTCT+TGG | 0.475996 | 5.3:+13645586 | None:intergenic |
AGAGGGCCGATTCCGTCGCC+GGG | 0.478788 | 5.3:+13650581 | None:intergenic |
GCCTGAGCAATTTGATGTCA+TGG | 0.486144 | 5.3:-13648109 | MS.gene64856:intron |
CTTGTTGCAAATACAGCGGC+AGG | 0.486316 | 5.3:-13646706 | MS.gene64856:CDS |
AAGGAGAAGTGCCACAGGAT+TGG | 0.491158 | 5.3:+13645734 | None:intergenic |
AAGGTGTTTGAGGAGGTTTG+TGG | 0.493042 | 5.3:+13650694 | None:intergenic |
GAGAGGGCCGATTCCGTCGC+CGG | 0.493954 | 5.3:+13650580 | None:intergenic |
GGATTAGGGTTACATTGCGG+GGG | 0.495232 | 5.3:+13650603 | None:intergenic |
GTCAGTTGCTTTAATCTGGA+AGG | 0.496580 | 5.3:-13650335 | MS.gene64856:CDS |
CGGCGCTGTTGAACAAGTAA+TGG | 0.501927 | 5.3:-13650552 | MS.gene64856:CDS |
TGGAGGCACTGGTGTCATGC+CGG | 0.510683 | 5.3:-13646677 | MS.gene64856:CDS |
TTGGCGACTCCGATGGGTGG+TGG | 0.513125 | 5.3:-13650413 | MS.gene64856:CDS |
GAGGTTGCCACAAAGTATCC+TGG | 0.516332 | 5.3:-13648186 | MS.gene64856:CDS |
AATAAGGTCTGTTTGAAAGG+TGG | 0.522695 | 5.3:-13650437 | MS.gene64856:CDS |
GCGTGGAGATAAGGTGTTTG+AGG | 0.525687 | 5.3:+13650684 | None:intergenic |
AATGTCTTTGCAGGTAATGT+TGG | 0.527179 | 5.3:-13645834 | MS.gene64856:intron |
CAAGATTTCCATAAAGATTG+GGG | 0.528612 | 5.3:+13646725 | None:intergenic |
GCTTAATTTGCAGCTGAGGA+AGG | 0.528655 | 5.3:-13650381 | MS.gene64856:CDS |
TGAGCATCATTGCGGAAGAA+AGG | 0.530564 | 5.3:+13645715 | None:intergenic |
GGGGCGGGGCATGTAGGTTA+CGG | 0.533314 | 5.3:+13650637 | None:intergenic |
TACATGCCCCGCCCCGGAGA+CGG | 0.536211 | 5.3:-13650629 | MS.gene64856:CDS |
TTTGAACAAGGTGCTTCCGC+AGG | 0.536373 | 5.3:-13645795 | MS.gene64856:CDS |
GTTATTAGGGAGAATACTGA+AGG | 0.537381 | 5.3:-13650278 | MS.gene64856:CDS |
GGTGGTGGCGCGTGGAGATA+AGG | 0.541475 | 5.3:+13650675 | None:intergenic |
CATTACTTGTTCAACAGCGC+CGG | 0.543378 | 5.3:+13650553 | None:intergenic |
GGTGGATTGGCGACTCCGAT+GGG | 0.544930 | 5.3:-13650419 | MS.gene64856:CDS |
TTGAGACTCTCAACGACACC+GGG | 0.546059 | 5.3:+13650224 | None:intergenic |
GGTCTGTTTGAAAGGTGGAT+TGG | 0.550611 | 5.3:-13650432 | MS.gene64856:CDS |
AGCGATTCCATCTGAAGTGA+TGG | 0.550636 | 5.3:-13650474 | MS.gene64856:CDS |
AGGTGGATTGGCGACTCCGA+TGG | 0.556949 | 5.3:-13650420 | MS.gene64856:CDS |
AACATTATGAAGCTTGCAGA+TGG | 0.557251 | 5.3:-13648231 | MS.gene64856:CDS |
ACCATGACATCAAATTGCTC+AGG | 0.558319 | 5.3:+13648108 | None:intergenic |
GGTGCTTCCGCAGGAAATGT+TGG | 0.560130 | 5.3:-13645786 | MS.gene64856:CDS |
GATTAGGGTTACATTGCGGG+GGG | 0.563580 | 5.3:+13650604 | None:intergenic |
CGCAATGTAACCCTAATCCC+CGG | 0.573917 | 5.3:-13650599 | MS.gene64856:CDS |
TTCCGCAGGAAATGTTGGTA+AGG | 0.574592 | 5.3:-13645781 | MS.gene64856:CDS |
AATACTGAAGGGGAATATGC+TGG | 0.581107 | 5.3:-13650266 | MS.gene64856:CDS |
CTTGAGACTCTCAACGACAC+CGG | 0.585873 | 5.3:+13650223 | None:intergenic |
ATTCTTGGAATCTTGTCGAG+AGG | 0.590626 | 5.3:-13648205 | MS.gene64856:CDS |
GGATTGGCGACTCCGATGGG+TGG | 0.593367 | 5.3:-13650416 | MS.gene64856:CDS |
GTAACCCTAATCCCCGGCGA+CGG | 0.593645 | 5.3:-13650593 | MS.gene64856:CDS |
TACAGGACAAAGGACCTTGG+AGG | 0.595343 | 5.3:-13645621 | MS.gene64856:CDS |
GTATCTAAATAACAGAAAGA+AGG | 0.597022 | 5.3:-13648274 | MS.gene64856:CDS |
GTTCGCTTAATTTGCAGCTG+AGG | 0.597579 | 5.3:-13650385 | MS.gene64856:CDS |
GGGGCATGTAGGTTACGGTA+CGG | 0.599567 | 5.3:+13650642 | None:intergenic |
TGGAGATAAGGTGTTTGAGG+AGG | 0.600685 | 5.3:+13650687 | None:intergenic |
GCATGTAGGTTACGGTACGG+GGG | 0.601867 | 5.3:+13650645 | None:intergenic |
GTAACCTACATGCCCCGCCC+CGG | 0.604970 | 5.3:-13650635 | MS.gene64856:CDS |
GAAGAAAGGAGAAGTGCCAC+AGG | 0.610058 | 5.3:+13645729 | None:intergenic |
TGCATCAACAACCTCTTGGG+TGG | 0.620983 | 5.3:+13645590 | None:intergenic |
TCAACAGCGCCGGTTACGAG+AGG | 0.623169 | 5.3:+13650563 | None:intergenic |
CAACAGCGCCGGTTACGAGA+GGG | 0.629447 | 5.3:+13650564 | None:intergenic |
TTCGAGAAATTCGAAGTGCA+CGG | 0.630058 | 5.3:-13650506 | MS.gene64856:CDS |
CGGTGTCGTTGAGAGTCTCA+AGG | 0.630865 | 5.3:-13650222 | MS.gene64856:intron |
ACAGGACAAAGGACCTTGGA+GGG | 0.632351 | 5.3:-13645620 | MS.gene64856:CDS |
GGCACTGGTGTCATGCCGGG+AGG | 0.634816 | 5.3:-13646673 | MS.gene64856:intron |
TATTAGGGAGAATACTGAAG+GGG | 0.638863 | 5.3:-13650276 | MS.gene64856:CDS |
ACAGCGGCAGGCATTGCTGG+AGG | 0.645225 | 5.3:-13646694 | MS.gene64856:CDS |
CACCTTGTTCAAATACAGCA+TGG | 0.646572 | 5.3:+13645805 | None:intergenic |
AAGTACAGGACAAAGGACCT+TGG | 0.646920 | 5.3:-13645624 | MS.gene64856:CDS |
TTCCTTACCAACATTTCCTG+CGG | 0.649166 | 5.3:+13645779 | None:intergenic |
TTATTAGGGAGAATACTGAA+GGG | 0.651297 | 5.3:-13650277 | MS.gene64856:CDS |
ATATGCTGGTCTTGAACATG+AGG | 0.652648 | 5.3:-13650252 | MS.gene64856:CDS |
TGTCTTTGCAGGTAATGTTG+GGG | 0.652865 | 5.3:-13645832 | MS.gene64856:intron |
AGAGGGTAAGTACAGGACAA+AGG | 0.652879 | 5.3:-13645631 | MS.gene64856:CDS |
GAACTAACACCACCACCCAT+CGG | 0.665416 | 5.3:+13650404 | None:intergenic |
AAGATTTCCATAAAGATTGG+GGG | 0.670781 | 5.3:+13646726 | None:intergenic |
GACCATGCTGTATTTGAACA+AGG | 0.680946 | 5.3:-13645807 | MS.gene64856:CDS |
AAGATGTCTGAGCATCATTG+CGG | 0.685294 | 5.3:+13645707 | None:intergenic |
GAGGGCCGATTCCGTCGCCG+GGG | 0.686332 | 5.3:+13650582 | None:intergenic |
AGGGACAAGCACCACCCAAG+AGG | 0.691399 | 5.3:-13645601 | MS.gene64856:CDS |
AGAAAAGAAAGCCAATCCTG+TGG | 0.714161 | 5.3:-13645745 | MS.gene64856:CDS |
AAATCTTGTTGCAAATACAG+CGG | 0.734643 | 5.3:-13646710 | MS.gene64856:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTAAATAAAAAAATT+TGG | - | chr5.3:13648279-13648298 | MS.gene64856:CDS | 0.0% |
!! | TAATTAAATATGATAAAAGT+TGG | + | chr5.3:13647413-13647432 | None:intergenic | 10.0% |
!! | TTGTAATAATGAATATAAAA+GGG | - | chr5.3:13649359-13649378 | MS.gene64856:intron | 10.0% |
!! | TTTGTAATAATGAATATAAA+AGG | - | chr5.3:13649358-13649377 | MS.gene64856:intron | 10.0% |
!!! | TTTTTTTTTGCTTATAATAT+GGG | - | chr5.3:13647628-13647647 | MS.gene64856:intron | 10.0% |
!!! | TTTTTTTTTTGCTTATAATA+TGG | - | chr5.3:13647627-13647646 | MS.gene64856:intron | 10.0% |
!! | ATATAATACATTCATTCTTA+CGG | - | chr5.3:13647245-13647264 | MS.gene64856:intron | 15.0% |
!! | ATTCTAATGAAAATATAGAT+AGG | - | chr5.3:13650304-13650323 | MS.gene64856:CDS | 15.0% |
!! | CATATAATTAGATTAAACTA+GGG | + | chr5.3:13649170-13649189 | None:intergenic | 15.0% |
!! | TCATATAATTAGATTAAACT+AGG | + | chr5.3:13649171-13649190 | None:intergenic | 15.0% |
!! | TGTAATAATGAATATAAAAG+GGG | - | chr5.3:13649360-13649379 | MS.gene64856:intron | 15.0% |
!! | TTCTAATGAAAATATAGATA+GGG | - | chr5.3:13650305-13650324 | MS.gene64856:CDS | 15.0% |
!!! | CATCATAATTTTTTTAACAT+AGG | - | chr5.3:13649142-13649161 | MS.gene64856:intron | 15.0% |
!!! | GTTTTTTTTGCTTATAATTT+AGG | + | chr5.3:13647355-13647374 | None:intergenic | 15.0% |
!!! | TATATTTCCTTTTATTACTT+TGG | - | chr5.3:13648365-13648384 | MS.gene64856:intron | 15.0% |
!!! | TATTTAATTAGGTTTTGATA+TGG | - | chr5.3:13649251-13649270 | MS.gene64856:intron | 15.0% |
!!! | TTTAATCAATCACTATATTT+TGG | + | chr5.3:13649875-13649894 | None:intergenic | 15.0% |
!! | AAGACTCAAATAATTATCTT+TGG | + | chr5.3:13648501-13648520 | None:intergenic | 20.0% |
!! | AATATTCAAATGTGATAGTT+TGG | + | chr5.3:13646219-13646238 | None:intergenic | 20.0% |
!! | GAATATACTTTGTATTTAAC+AGG | - | chr5.3:13646940-13646959 | MS.gene64856:intron | 20.0% |
!! | GTTTAATCTAATTATATGAG+AGG | - | chr5.3:13649172-13649191 | MS.gene64856:intron | 20.0% |
!! | TAATTCTCCAAAGTAATAAA+AGG | + | chr5.3:13648375-13648394 | None:intergenic | 20.0% |
!! | TATCTATACAGCAAATATAA+AGG | + | chr5.3:13647829-13647848 | None:intergenic | 20.0% |
!! | TCAATGAAAACAAAAAATAG+AGG | - | chr5.3:13649910-13649929 | MS.gene64856:intron | 20.0% |
!! | TTACAATAAACAACCTTTAA+AGG | + | chr5.3:13647747-13647766 | None:intergenic | 20.0% |
!! | TTCCTATAAAACTTATTTCA+AGG | - | chr5.3:13647547-13647566 | MS.gene64856:intron | 20.0% |
!! | TTCTTTCAATCAATTATTTC+AGG | - | chr5.3:13649822-13649841 | MS.gene64856:intron | 20.0% |
!! | TTGAAATTAAGAAAACATTG+AGG | - | chr5.3:13649413-13649432 | MS.gene64856:intron | 20.0% |
!! | TTGAAATTTGAATCATTTCA+TGG | - | chr5.3:13646732-13646751 | MS.gene64856:CDS | 20.0% |
!! | TTTCTTAACAATTTCTCTTA+TGG | + | chr5.3:13646469-13646488 | None:intergenic | 20.0% |
!!! | AATGTTTTCTTAATTTCAAG+TGG | + | chr5.3:13649412-13649431 | None:intergenic | 20.0% |
!!! | ATCCTTGAAATAAGTTTTAT+AGG | + | chr5.3:13647552-13647571 | None:intergenic | 20.0% |
!!! | ATGTTGATATTGTTGTTATT+AGG | - | chr5.3:13645987-13646006 | MS.gene64856:intron | 20.0% |
!!! | CAAAAAATTATCTTTTCCAA+AGG | - | chr5.3:13647441-13647460 | MS.gene64856:intron | 20.0% |
!!! | GTCTTTTTTGCTTATAATTT+GGG | + | chr5.3:13647391-13647410 | None:intergenic | 20.0% |
!!! | TGTTGATATTGTTGTTATTA+GGG | - | chr5.3:13645988-13646007 | MS.gene64856:intron | 20.0% |
!!! | TTAACTTTTGTCATTTGAAA+AGG | - | chr5.3:13649218-13649237 | MS.gene64856:intron | 20.0% |
!!! | TTTTTGAAAGCAAATTAAAC+AGG | - | chr5.3:13648569-13648588 | MS.gene64856:intron | 20.0% |
!!! | TTTTTGCTTATAATTTAGGA+CGG | + | chr5.3:13647351-13647370 | None:intergenic | 20.0% |
! | AAAAAGAAAATCTAGGAAGA+AGG | - | chr5.3:13649073-13649092 | MS.gene64856:intron | 25.0% |
! | AAAAATGTTTAAACAAGTGC+TGG | + | chr5.3:13648264-13648283 | None:intergenic | 25.0% |
! | AAAATCAAAAGCAAAATGAC+TGG | + | chr5.3:13649494-13649513 | None:intergenic | 25.0% |
! | AAATCAAAAGCAAAATGACT+GGG | + | chr5.3:13649493-13649512 | None:intergenic | 25.0% |
! | AACAAGATTTCCATAAAGAT+TGG | + | chr5.3:13649559-13649578 | None:intergenic | 25.0% |
! | ACAAGATTTCCATAAAGATT+GGG | + | chr5.3:13649558-13649577 | None:intergenic | 25.0% |
! | ATACACTGCTAAAATATTGA+AGG | + | chr5.3:13650127-13650146 | None:intergenic | 25.0% |
! | ATGAAAACAAAAAATAGAGG+TGG | - | chr5.3:13649913-13649932 | MS.gene64856:intron | 25.0% |
! | ATTTCATTATACTTGATTCC+AGG | + | chr5.3:13648114-13648133 | None:intergenic | 25.0% |
! | ATTTGATAAGAAAAATGCCA+CGG | + | chr5.3:13649694-13649713 | None:intergenic | 25.0% |
! | CCAAAAGTGGATAAATAATT+GGG | + | chr5.3:13648224-13648243 | None:intergenic | 25.0% |
! | GATGTAAAAACAATTTCCAT+TGG | + | chr5.3:13647527-13647546 | None:intergenic | 25.0% |
! | GTATCTAAATAACAGAAAGA+AGG | - | chr5.3:13648005-13648024 | MS.gene64856:intron | 25.0% |
! | GTTGGATGTTGTATTTAATT+AGG | - | chr5.3:13649240-13649259 | MS.gene64856:intron | 25.0% |
! | TAATCTTGATACAATCAAGA+TGG | - | chr5.3:13646246-13646265 | MS.gene64856:intron | 25.0% |
! | TTAGTAATATTTATACCTCC+CGG | + | chr5.3:13649624-13649643 | None:intergenic | 25.0% |
! | TTATTGTCGTGAGTTAATAA+GGG | + | chr5.3:13646558-13646577 | None:intergenic | 25.0% |
! | TTCCCATCTACAAATTAATT+AGG | - | chr5.3:13647027-13647046 | MS.gene64856:intron | 25.0% |
! | TTTATTGTCGTGAGTTAATA+AGG | + | chr5.3:13646559-13646578 | None:intergenic | 25.0% |
!! | AAACAATTTCCATTGGTTAT+TGG | + | chr5.3:13647520-13647539 | None:intergenic | 25.0% |
!! | ATGTATAATTTGCGTGTTTA+TGG | - | chr5.3:13646868-13646887 | MS.gene64856:intron | 25.0% |
!! | ATTAGGAGGTTTAATTTCTT+CGG | - | chr5.3:13647044-13647063 | MS.gene64856:intron | 25.0% |
!! | GTTACAGTTAAGTGATTTTT+CGG | - | chr5.3:13646604-13646623 | MS.gene64856:intron | 25.0% |
!! | TTGTTAGACATATTTTGCAT+CGG | - | chr5.3:13646989-13647008 | MS.gene64856:intron | 25.0% |
!!! | CTCCTAATTAATTTGTAGAT+GGG | + | chr5.3:13647032-13647051 | None:intergenic | 25.0% |
!!! | CTTTGCATTTAATTTTCCTT+TGG | + | chr5.3:13647460-13647479 | None:intergenic | 25.0% |
!!! | GAAGGTTGATTTTTCATTAA+TGG | + | chr5.3:13650109-13650128 | None:intergenic | 25.0% |
!!! | GGTCTTTTTTGCTTATAATT+TGG | + | chr5.3:13647392-13647411 | None:intergenic | 25.0% |
AAATCTTGTTGCAAATACAG+CGG | - | chr5.3:13649569-13649588 | MS.gene64856:intron | 30.0% | |
AAGAATAAGGTCTGTTTGAA+AGG | - | chr5.3:13645839-13645858 | MS.gene64856:intron | 30.0% | |
AAGATTTCCATAAAGATTGG+GGG | + | chr5.3:13649556-13649575 | None:intergenic | 30.0% | |
AATAGTATCTTGCTTCCATA+TGG | - | chr5.3:13649711-13649730 | MS.gene64856:intron | 30.0% | |
AATCGAGATATTCAAGCTTA+AGG | + | chr5.3:13650416-13650435 | None:intergenic | 30.0% | |
AATTTCTCTTATGGTTCTCT+AGG | + | chr5.3:13646460-13646479 | None:intergenic | 30.0% | |
AGGAAATATAAACAGACACA+TGG | + | chr5.3:13648355-13648374 | None:intergenic | 30.0% | |
ATAAACATATCAGCCAAAAG+TGG | + | chr5.3:13648237-13648256 | None:intergenic | 30.0% | |
ATTCATTTATCTTCCTCAAC+AGG | - | chr5.3:13649955-13649974 | MS.gene64856:intron | 30.0% | |
ATTTGAATCATTTCATGGCT+AGG | - | chr5.3:13646737-13646756 | MS.gene64856:intron | 30.0% | |
CAAGATTTCCATAAAGATTG+GGG | + | chr5.3:13649557-13649576 | None:intergenic | 30.0% | |
CCATCTACAAATTAATTAGG+AGG | - | chr5.3:13647030-13647049 | MS.gene64856:intron | 30.0% | |
CTGCTAATTTGAGTAATTTC+TGG | - | chr5.3:13648950-13648969 | MS.gene64856:intron | 30.0% | |
CTTTAGTTGAGTCAAATAAC+GGG | - | chr5.3:13650236-13650255 | MS.gene64856:CDS | 30.0% | |
CTTTCTTGCTAGTAATTGAT+TGG | - | chr5.3:13649460-13649479 | MS.gene64856:intron | 30.0% | |
GAATGAAACAGTATTTGTGT+AGG | - | chr5.3:13649095-13649114 | MS.gene64856:intron | 30.0% | |
GATATTCAAGCTTAAGGTTA+AGG | + | chr5.3:13650410-13650429 | None:intergenic | 30.0% | |
GCCAAAAGTGGATAAATAAT+TGG | + | chr5.3:13648225-13648244 | None:intergenic | 30.0% | |
GCTAACTAAAAGAAAAGTAG+TGG | - | chr5.3:13647304-13647323 | MS.gene64856:intron | 30.0% | |
GCTTTAGTTGAGTCAAATAA+CGG | - | chr5.3:13650235-13650254 | MS.gene64856:CDS | 30.0% | |
GGAAATATAAACAGACACAT+GGG | + | chr5.3:13648354-13648373 | None:intergenic | 30.0% | |
GGAAATTTCCAATCATCTTT+GGG | - | chr5.3:13647266-13647285 | MS.gene64856:intron | 30.0% | |
GGAATCGATTAAGAAGAATA+AGG | - | chr5.3:13645826-13645845 | MS.gene64856:intron | 30.0% | |
GGACTATTCTTTAAATGTAG+AGG | - | chr5.3:13647796-13647815 | MS.gene64856:intron | 30.0% | |
GGATAAATAATTGGGATTCA+GGG | + | chr5.3:13648216-13648235 | None:intergenic | 30.0% | |
TATTACCAGTGAATGCAATA+CGG | + | chr5.3:13647214-13647233 | None:intergenic | 30.0% | |
TCAAATTAGCAGAAACAGAA+AGG | + | chr5.3:13648942-13648961 | None:intergenic | 30.0% | |
TCATCTCACAAGAAAAAACT+TGG | - | chr5.3:13646812-13646831 | MS.gene64856:intron | 30.0% | |
TCTCAATAACCAATAACCAA+TGG | - | chr5.3:13647508-13647527 | MS.gene64856:intron | 30.0% | |
TGGATAAATAATTGGGATTC+AGG | + | chr5.3:13648217-13648236 | None:intergenic | 30.0% | |
TTATTAGGGAGAATACTGAA+GGG | - | chr5.3:13646002-13646021 | MS.gene64856:intron | 30.0% | |
TTTAGTTGAGTCAAATAACG+GGG | - | chr5.3:13650237-13650256 | MS.gene64856:CDS | 30.0% | |
! | AAGAATAGTCCTCTAAGAAA+CGG | + | chr5.3:13647787-13647806 | None:intergenic | 30.0% |
! | AATGCTATTTGGTAATATGC+GGG | - | chr5.3:13647125-13647144 | MS.gene64856:intron | 30.0% |
! | AATGGTAGTGACAACATAAT+TGG | - | chr5.3:13650026-13650045 | MS.gene64856:intron | 30.0% |
! | ATTTTGCATCGGAAATTTGT+GGG | - | chr5.3:13647000-13647019 | MS.gene64856:intron | 30.0% |
! | CCCAATTATTTATCCACTTT+TGG | - | chr5.3:13648221-13648240 | MS.gene64856:CDS | 30.0% |
! | CTAGATTTTCTTTTTGTGCA+GGG | + | chr5.3:13649068-13649087 | None:intergenic | 30.0% |
! | GAATGCTATTTGGTAATATG+CGG | - | chr5.3:13647124-13647143 | MS.gene64856:intron | 30.0% |
! | GTTTAATTTCTTCGGTGAAA+TGG | - | chr5.3:13647052-13647071 | MS.gene64856:intron | 30.0% |
! | TATTTTGCATCGGAAATTTG+TGG | - | chr5.3:13646999-13647018 | MS.gene64856:intron | 30.0% |
! | TGTATGAGATTTTCTATCGT+TGG | - | chr5.3:13648530-13648549 | MS.gene64856:intron | 30.0% |
!! | AGTATCTATTTCTGTTGAAC+TGG | + | chr5.3:13649287-13649306 | None:intergenic | 30.0% |
!! | ATTTGGTGCTATTAGTTTGT+TGG | - | chr5.3:13648296-13648315 | MS.gene64856:CDS | 30.0% |
!! | ATTTGTTATACTTCCTCAGA+GGG | + | chr5.3:13649329-13649348 | None:intergenic | 30.0% |
!! | CCTCCTAATTAATTTGTAGA+TGG | + | chr5.3:13647033-13647052 | None:intergenic | 30.0% |
!! | CTTTTGTCATTTGAAAAGGT+TGG | - | chr5.3:13649222-13649241 | MS.gene64856:intron | 30.0% |
!!! | ATGAAGGAAACTTTTTTGAG+AGG | - | chr5.3:13648640-13648659 | MS.gene64856:intron | 30.0% |
!!! | GATTTTTTTGTTCTCGAAAG+CGG | - | chr5.3:13647094-13647113 | MS.gene64856:intron | 30.0% |
AAACAGTATTTGTGTAGGAC+AGG | - | chr5.3:13649100-13649119 | MS.gene64856:intron | 35.0% | |
AACAGTATTTGTGTAGGACA+GGG | - | chr5.3:13649101-13649120 | MS.gene64856:intron | 35.0% | |
AACATTATGAAGCTTGCAGA+TGG | - | chr5.3:13648048-13648067 | MS.gene64856:intron | 35.0% | |
AAGATGTGGAAATTCGACTT+AGG | - | chr5.3:13646345-13646364 | MS.gene64856:intron | 35.0% | |
AATAAGGTCTGTTTGAAAGG+TGG | - | chr5.3:13645842-13645861 | MS.gene64856:intron | 35.0% | |
AATGTCTTTGCAGGTAATGT+TGG | - | chr5.3:13650445-13650464 | MS.gene64856:CDS | 35.0% | |
AGATATTTCCCGTTTCTTAG+AGG | - | chr5.3:13647775-13647794 | MS.gene64856:intron | 35.0% | |
AGCTTGAATATCTCGATTCA+TGG | - | chr5.3:13650418-13650437 | MS.gene64856:CDS | 35.0% | |
AGGAATGACAACATTAGAGA+GGG | - | chr5.3:13646297-13646316 | MS.gene64856:intron | 35.0% | |
AGGTGGTATAGAAATCAAAC+TGG | - | chr5.3:13649930-13649949 | MS.gene64856:intron | 35.0% | |
ATGTCTTTGCAGGTAATGTT+GGG | - | chr5.3:13650446-13650465 | MS.gene64856:CDS | 35.0% | |
ATTACCAGTGAATGCAATAC+GGG | + | chr5.3:13647213-13647232 | None:intergenic | 35.0% | |
ATTCAAGCTTAAGGTTAAGG+TGG | + | chr5.3:13650407-13650426 | None:intergenic | 35.0% | |
ATTTCCAAGTCCTTAGAAAC+TGG | - | chr5.3:13647162-13647181 | MS.gene64856:intron | 35.0% | |
CAAGAAAAAACTTGGATTGC+TGG | - | chr5.3:13646820-13646839 | MS.gene64856:intron | 35.0% | |
CATTTATCCAGTGATTTCTG+TGG | + | chr5.3:13648445-13648464 | None:intergenic | 35.0% | |
CCTAGCAAAATTTGAGTATG+AGG | + | chr5.3:13647933-13647952 | None:intergenic | 35.0% | |
CCTGCACAAAAAGAAAATCT+AGG | - | chr5.3:13649066-13649085 | MS.gene64856:intron | 35.0% | |
CGGAAATTTCCAATCATCTT+TGG | - | chr5.3:13647265-13647284 | MS.gene64856:intron | 35.0% | |
GAAAATATAGATAGGGCAGT+TGG | - | chr5.3:13650312-13650331 | MS.gene64856:CDS | 35.0% | |
GAAAGCAAATTAAACAGGAG+TGG | - | chr5.3:13648574-13648593 | MS.gene64856:intron | 35.0% | |
GAATACTTATTGGGTAGCAA+AGG | + | chr5.3:13649036-13649055 | None:intergenic | 35.0% | |
GGATAAGAGAACTTACTAGA+GGG | - | chr5.3:13646418-13646437 | MS.gene64856:intron | 35.0% | |
GTTATTAGGGAGAATACTGA+AGG | - | chr5.3:13646001-13646020 | MS.gene64856:intron | 35.0% | |
GTTTATCATCTGAGAAGCTA+AGG | + | chr5.3:13647191-13647210 | None:intergenic | 35.0% | |
TAGGAATGACAACATTAGAG+AGG | - | chr5.3:13646296-13646315 | MS.gene64856:intron | 35.0% | |
TATTAGGGAGAATACTGAAG+GGG | - | chr5.3:13646003-13646022 | MS.gene64856:intron | 35.0% | |
TCAAGTATCCCAAAGATGAT+TGG | + | chr5.3:13647277-13647296 | None:intergenic | 35.0% | |
TCTTGATACAATCAAGATGG+TGG | - | chr5.3:13646249-13646268 | MS.gene64856:intron | 35.0% | |
TGCTTATAATATGGGACAGA+GGG | - | chr5.3:13647636-13647655 | MS.gene64856:intron | 35.0% | |
TGGATAAGAGAACTTACTAG+AGG | - | chr5.3:13646417-13646436 | MS.gene64856:intron | 35.0% | |
TGGCTCGTTGAATACTTATT+GGG | + | chr5.3:13649045-13649064 | None:intergenic | 35.0% | |
TTAAACAACAGAGAAACCCA+TGG | + | chr5.3:13648408-13648427 | None:intergenic | 35.0% | |
TTCTATGAGTACTCACTCAT+TGG | - | chr5.3:13646702-13646721 | MS.gene64856:CDS | 35.0% | |
TTGCTTATAATATGGGACAG+AGG | - | chr5.3:13647635-13647654 | MS.gene64856:intron | 35.0% | |
! | AATTGCTTGTACCTTTTGCA+TGG | - | chr5.3:13646906-13646925 | MS.gene64856:intron | 35.0% |
! | AGAATAGTCCTCTAAGAAAC+GGG | + | chr5.3:13647786-13647805 | None:intergenic | 35.0% |
! | CCTAGATTTTCTTTTTGTGC+AGG | + | chr5.3:13649069-13649088 | None:intergenic | 35.0% |
! | CCTCATACTCAAATTTTGCT+AGG | - | chr5.3:13647930-13647949 | MS.gene64856:intron | 35.0% |
! | CTCTGAGGAAGTATAACAAA+TGG | - | chr5.3:13649328-13649347 | MS.gene64856:intron | 35.0% |
! | CTTTTGCATGGTAGATAACT+CGG | - | chr5.3:13646918-13646937 | MS.gene64856:intron | 35.0% |
! | GTAGAAATTGTGATAACGTG+TGG | - | chr5.3:13646672-13646691 | MS.gene64856:intron | 35.0% |
! | TGCTTATAATTTAGGACGGA+GGG | + | chr5.3:13647347-13647366 | None:intergenic | 35.0% |
! | TTGCTTATAATTTAGGACGG+AGG | + | chr5.3:13647348-13647367 | None:intergenic | 35.0% |
! | TTTCTTCGGTGAAATGGATT+CGG | - | chr5.3:13647058-13647077 | MS.gene64856:intron | 35.0% |
! | TTTTGCATCGGAAATTTGTG+GGG | - | chr5.3:13647001-13647020 | MS.gene64856:intron | 35.0% |
!! | ATCATCTTTGGGATACTTGA+TGG | - | chr5.3:13647277-13647296 | MS.gene64856:intron | 35.0% |
!! | CATTTGTTATACTTCCTCAG+AGG | + | chr5.3:13649330-13649349 | None:intergenic | 35.0% |
!! | CTATCGTTGGTTCAATCAAA+AGG | - | chr5.3:13648543-13648562 | MS.gene64856:intron | 35.0% |
!! | GTGAAACGAGTCATTTTAGA+GGG | - | chr5.3:13650631-13650650 | MS.gene64856:CDS | 35.0% |
!! | TAAACACTATTTCTGCTTGC+AGG | - | chr5.3:13649527-13649546 | MS.gene64856:intron | 35.0% |
!! | TCATTTTAGAGGGTAAGTAC+AGG | - | chr5.3:13650641-13650660 | MS.gene64856:CDS | 35.0% |
!! | TGTGAAACGAGTCATTTTAG+AGG | - | chr5.3:13650630-13650649 | MS.gene64856:CDS | 35.0% |
!!! | CTTTTTTGAGAGGATAACGA+AGG | - | chr5.3:13648650-13648669 | MS.gene64856:intron | 35.0% |
!!! | TTGCTGGCTTTTAGATGAAT+TGG | - | chr5.3:13646836-13646855 | MS.gene64856:intron | 35.0% |
AAATTCGACTTAGGCGGTTT+GGG | - | chr5.3:13646354-13646373 | MS.gene64856:intron | 40.0% | |
AAGATGTCTGAGCATCATTG+CGG | + | chr5.3:13650575-13650594 | None:intergenic | 40.0% | |
AATACTGAAGGGGAATATGC+TGG | - | chr5.3:13646013-13646032 | MS.gene64856:intron | 40.0% | |
ACAACATTAGAGAGGGAGTT+GGG | - | chr5.3:13646304-13646323 | MS.gene64856:intron | 40.0% | |
ACCATGACATCAAATTGCTC+AGG | + | chr5.3:13648174-13648193 | None:intergenic | 40.0% | |
ACCTTGACATTGTGACATGT+GGG | - | chr5.3:13647895-13647914 | MS.gene64856:intron | 40.0% | |
AGAAAAGAAAGCCAATCCTG+TGG | - | chr5.3:13650534-13650553 | MS.gene64856:CDS | 40.0% | |
ATACTTCCTCAGAGGGATAA+AGG | + | chr5.3:13649322-13649341 | None:intergenic | 40.0% | |
ATCTGGAAGGATTGACTACT+AGG | - | chr5.3:13645957-13645976 | MS.gene64856:intron | 40.0% | |
ATGTGGAAATTCGACTTAGG+CGG | - | chr5.3:13646348-13646367 | MS.gene64856:intron | 40.0% | |
ATTCTTGGAATCTTGTCGAG+AGG | - | chr5.3:13648074-13648093 | MS.gene64856:intron | 40.0% | |
CACCTTGTTCAAATACAGCA+TGG | + | chr5.3:13650477-13650496 | None:intergenic | 40.0% | |
CATGGATGAAATGTCTTTGC+AGG | - | chr5.3:13650436-13650455 | MS.gene64856:CDS | 40.0% | |
CCACTGTTGATGTCCTTTAA+AGG | - | chr5.3:13647731-13647750 | MS.gene64856:intron | 40.0% | |
CGAGTTATCTACCATGCAAA+AGG | + | chr5.3:13646920-13646939 | None:intergenic | 40.0% | |
CGGTGATAGAGAATGCTATT+TGG | - | chr5.3:13647114-13647133 | MS.gene64856:intron | 40.0% | |
CTAGCCATTTGCTTATCTCT+GGG | - | chr5.3:13648599-13648618 | MS.gene64856:intron | 40.0% | |
CTCCTTACCAAAGAATCAAC+AGG | + | chr5.3:13646395-13646414 | None:intergenic | 40.0% | |
CTTGATTCCAGGATACTTTG+TGG | + | chr5.3:13648103-13648122 | None:intergenic | 40.0% | |
GACCATGCTGTATTTGAACA+AGG | - | chr5.3:13650472-13650491 | MS.gene64856:CDS | 40.0% | |
GCTTGCAGATGGTTTATTCT+TGG | - | chr5.3:13648059-13648078 | MS.gene64856:intron | 40.0% | |
GTGGCTCGTTGAATACTTAT+TGG | + | chr5.3:13649046-13649065 | None:intergenic | 40.0% | |
TAAACCCGTATTGCATTCAC+TGG | - | chr5.3:13647206-13647225 | MS.gene64856:intron | 40.0% | |
TACTGCATCAACAACCTCTT+GGG | + | chr5.3:13650695-13650714 | None:intergenic | 40.0% | |
TAGCCATTTGCTTATCTCTG+GGG | - | chr5.3:13648600-13648619 | MS.gene64856:intron | 40.0% | |
TCATAACGACAGTGACCATA+TGG | + | chr5.3:13649729-13649748 | None:intergenic | 40.0% | |
TCCAATCGTTCAGCAAATAC+AGG | + | chr5.3:13650604-13650623 | None:intergenic | 40.0% | |
TCTGTTGAACTGGCACAATA+TGG | + | chr5.3:13649277-13649296 | None:intergenic | 40.0% | |
TGATTCTTTGGTAAGGAGAG+TGG | - | chr5.3:13646397-13646416 | MS.gene64856:intron | 40.0% | |
TGCTCTCTTTGTAGTTACTG+TGG | - | chr5.3:13648862-13648881 | MS.gene64856:intron | 40.0% | |
TGGGGGCAATAACATAATGA+AGG | - | chr5.3:13648624-13648643 | MS.gene64856:intron | 40.0% | |
TGTCGTTATGAGATGTGTGA+GGG | - | chr5.3:13649738-13649757 | MS.gene64856:intron | 40.0% | |
TGTCTTTGCAGGTAATGTTG+GGG | - | chr5.3:13650447-13650466 | MS.gene64856:CDS | 40.0% | |
TTACTGCATCAACAACCTCT+TGG | + | chr5.3:13650696-13650715 | None:intergenic | 40.0% | |
TTCCTTACCAACATTTCCTG+CGG | + | chr5.3:13650503-13650522 | None:intergenic | 40.0% | |
TTCGAGAAATTCGAAGTGCA+CGG | - | chr5.3:13645773-13645792 | MS.gene64856:CDS | 40.0% | |
! | ATCGATTCCATCACTTCAGA+TGG | + | chr5.3:13645815-13645834 | None:intergenic | 40.0% |
! | CAAGTTGACGGGATATGATT+AGG | - | chr5.3:13646277-13646296 | MS.gene64856:intron | 40.0% |
! | CCTTTAAAGGACATCAACAG+TGG | + | chr5.3:13647734-13647753 | None:intergenic | 40.0% |
! | GATTTTCTTTTTGTGCAGGG+TGG | + | chr5.3:13649065-13649084 | None:intergenic | 40.0% |
! | GCTTGTCAGTTGCTTTAATC+TGG | - | chr5.3:13645940-13645959 | MS.gene64856:intron | 40.0% |
! | GTCAGTTGCTTTAATCTGGA+AGG | - | chr5.3:13645944-13645963 | MS.gene64856:intron | 40.0% |
! | TCCTGTATTTGCTGAACGAT+TGG | - | chr5.3:13650600-13650619 | MS.gene64856:CDS | 40.0% |
! | TTCTTCGGTGAAATGGATTC+GGG | - | chr5.3:13647059-13647078 | MS.gene64856:intron | 40.0% |
! | TTGAGTCAAATAACGGGGAT+GGG | - | chr5.3:13650242-13650261 | MS.gene64856:CDS | 40.0% |
!! | ATATGCTGGTCTTGAACATG+AGG | - | chr5.3:13646027-13646046 | MS.gene64856:intron | 40.0% |
!! | ATGGTGGAAACTCAAGTTGA+CGG | - | chr5.3:13646265-13646284 | MS.gene64856:intron | 40.0% |
!! | GACCTGTTGATTCTTTGGTA+AGG | - | chr5.3:13646390-13646409 | MS.gene64856:intron | 40.0% |
!! | GAGAAGACCTGTTGATTCTT+TGG | - | chr5.3:13646385-13646404 | MS.gene64856:intron | 40.0% |
AAGTACAGGACAAAGGACCT+TGG | - | chr5.3:13650655-13650674 | MS.gene64856:CDS | 45.0% | |
ACCCACATGTCACAATGTCA+AGG | + | chr5.3:13647899-13647918 | None:intergenic | 45.0% | |
ACTTCTGCCACAGAAATCAC+TGG | - | chr5.3:13648435-13648454 | MS.gene64856:intron | 45.0% | |
AGAATTAGTGCCAACTGCCA+TGG | - | chr5.3:13648388-13648407 | MS.gene64856:intron | 45.0% | |
AGAGGGTAAGTACAGGACAA+AGG | - | chr5.3:13650648-13650667 | MS.gene64856:CDS | 45.0% | |
AGCCATTTGCTTATCTCTGG+GGG | - | chr5.3:13648601-13648620 | MS.gene64856:intron | 45.0% | |
ATGAGTACTCACTCATTGGC+TGG | - | chr5.3:13646706-13646725 | MS.gene64856:CDS | 45.0% | |
CAAATGCTGGAGAGAAGATG+TGG | - | chr5.3:13646331-13646350 | MS.gene64856:intron | 45.0% | |
CAACATTAGAGAGGGAGTTG+GGG | - | chr5.3:13646305-13646324 | MS.gene64856:intron | 45.0% | |
CACCTTGACATTGTGACATG+TGG | - | chr5.3:13647894-13647913 | MS.gene64856:intron | 45.0% | |
CAGGTTACCCCCAATCTTTA+TGG | - | chr5.3:13649546-13649565 | MS.gene64856:intron | 45.0% | |
CATTACTTGTTCAACAGCGC+CGG | + | chr5.3:13645729-13645748 | None:intergenic | 45.0% | |
CTATCTCCTTTATCCCTCTG+AGG | - | chr5.3:13649313-13649332 | MS.gene64856:intron | 45.0% | |
CTGTCGTTATGAGATGTGTG+AGG | - | chr5.3:13649737-13649756 | MS.gene64856:intron | 45.0% | |
CTTGAACATGAGGTTGTTCC+CGG | - | chr5.3:13646037-13646056 | MS.gene64856:intron | 45.0% | |
GAAATTCGACTTAGGCGGTT+TGG | - | chr5.3:13646353-13646372 | MS.gene64856:intron | 45.0% | |
GAATTAGTGCCAACTGCCAT+GGG | - | chr5.3:13648389-13648408 | MS.gene64856:intron | 45.0% | |
GACAACATTAGAGAGGGAGT+TGG | - | chr5.3:13646303-13646322 | MS.gene64856:intron | 45.0% | |
GACGATACATCACACATACG+AGG | - | chr5.3:13646514-13646533 | MS.gene64856:intron | 45.0% | |
GCCTGAGCAATTTGATGTCA+TGG | - | chr5.3:13648170-13648189 | MS.gene64856:CDS | 45.0% | |
GCTAGCCATTTGCTTATCTC+TGG | - | chr5.3:13648598-13648617 | MS.gene64856:intron | 45.0% | |
GCTCTCATTTGATTATGCCG+TGG | - | chr5.3:13649674-13649693 | MS.gene64856:intron | 45.0% | |
GGTCTGTTTGAAAGGTGGAT+TGG | - | chr5.3:13645847-13645866 | MS.gene64856:intron | 45.0% | |
GTCGTTATGAGATGTGTGAG+GGG | - | chr5.3:13649739-13649758 | MS.gene64856:intron | 45.0% | |
TCCAAGTCCTTAGAAACTGG+TGG | - | chr5.3:13647165-13647184 | MS.gene64856:intron | 45.0% | |
TCGAATTTCTCGAAGTGCAC+TGG | + | chr5.3:13645767-13645786 | None:intergenic | 45.0% | |
TCGTTATGAGATGTGTGAGG+GGG | - | chr5.3:13649740-13649759 | MS.gene64856:intron | 45.0% | |
TGAGCATCATTGCGGAAGAA+AGG | + | chr5.3:13650567-13650586 | None:intergenic | 45.0% | |
TGATGCCATCACTGTTTCCA+AGG | + | chr5.3:13649127-13649146 | None:intergenic | 45.0% | |
TTCCGCAGGAAATGTTGGTA+AGG | - | chr5.3:13650498-13650517 | MS.gene64856:CDS | 45.0% | |
TTCCTCAACAGGTTGCAGTA+TGG | - | chr5.3:13649966-13649985 | MS.gene64856:intron | 45.0% | |
! | AAGGTGTTTGAGGAGGTTTG+TGG | + | chr5.3:13645588-13645607 | None:intergenic | 45.0% |
! | AGCGATTCCATCTGAAGTGA+TGG | - | chr5.3:13645805-13645824 | MS.gene64856:CDS | 45.0% |
! | AGTTTTCTCGTCAGTCGTTG+AGG | - | chr5.3:13650185-13650204 | MS.gene64856:intron | 45.0% |
! | ATTTGCTTATCTCTGGGGGT+GGG | - | chr5.3:13648605-13648624 | MS.gene64856:intron | 45.0% |
! | GTTGAGTCAAATAACGGGGA+TGG | - | chr5.3:13650241-13650260 | MS.gene64856:CDS | 45.0% |
! | TGAGTACTCACTCATTGGCT+GGG | - | chr5.3:13646707-13646726 | MS.gene64856:CDS | 45.0% |
! | TGGAGATAAGGTGTTTGAGG+AGG | + | chr5.3:13645595-13645614 | None:intergenic | 45.0% |
!! | CTAGACTCAACAGTTCTGAG+TGG | + | chr5.3:13649772-13649791 | None:intergenic | 45.0% |
!! | GCTTAATTTGCAGCTGAGGA+AGG | - | chr5.3:13645898-13645917 | MS.gene64856:intron | 45.0% |
!! | GGGGTAATGGAGTTGTCAAA+TGG | - | chr5.3:13650008-13650027 | MS.gene64856:intron | 45.0% |
!! | GTTCGCTTAATTTGCAGCTG+AGG | - | chr5.3:13645894-13645913 | MS.gene64856:intron | 45.0% |
!! | TGGATTCGGGTTGCAAGTTT+AGG | - | chr5.3:13647072-13647091 | MS.gene64856:intron | 45.0% |
!! | TGGTGGAAACTCAAGTTGAC+GGG | - | chr5.3:13646266-13646285 | MS.gene64856:intron | 45.0% |
!! | TTATTAAGTTAATTAATTAA+TGG | - | chr5.3:13646145-13646164 | MS.gene64856:intron | 5.0% |
ACAGAGAAACCCATGGCAGT+TGG | + | chr5.3:13648401-13648420 | None:intergenic | 50.0% | |
ACAGGACAAAGGACCTTGGA+GGG | - | chr5.3:13650659-13650678 | MS.gene64856:CDS | 50.0% | |
ATTTGTGTAGGACAGGGCCT+TGG | - | chr5.3:13649107-13649126 | MS.gene64856:intron | 50.0% | |
CACCCCCAGAGATAAGCAAA+TGG | + | chr5.3:13648606-13648625 | None:intergenic | 50.0% | |
CGCAATGTAACCCTAATCCC+CGG | - | chr5.3:13645680-13645699 | MS.gene64856:CDS | 50.0% | |
CGGCGCTGTTGAACAAGTAA+TGG | - | chr5.3:13645727-13645746 | MS.gene64856:CDS | 50.0% | |
CGGGGATTAGGGTTACATTG+CGG | + | chr5.3:13645682-13645701 | None:intergenic | 50.0% | |
CTCAACAGGTTGCAGTATGG+AGG | - | chr5.3:13649969-13649988 | MS.gene64856:intron | 50.0% | |
CTCCATACTGCAACCTGTTG+AGG | + | chr5.3:13649971-13649990 | None:intergenic | 50.0% | |
CTTCCACAAATTCAGCCCAC+AGG | + | chr5.3:13650352-13650371 | None:intergenic | 50.0% | |
CTTGAGACTCTCAACGACAC+CGG | + | chr5.3:13646059-13646078 | None:intergenic | 50.0% | |
CTTGTTGCAAATACAGCGGC+AGG | - | chr5.3:13649573-13649592 | MS.gene64856:intron | 50.0% | |
GAACTAACACCACCACCCAT+CGG | + | chr5.3:13645878-13645897 | None:intergenic | 50.0% | |
GAGAACTTACTAGAGGGCAG+AGG | - | chr5.3:13646424-13646443 | MS.gene64856:intron | 50.0% | |
GATTAGGGTTACATTGCGGG+GGG | + | chr5.3:13645678-13645697 | None:intergenic | 50.0% | |
GCTAAGGCCACCAGTTTCTA+AGG | + | chr5.3:13647175-13647194 | None:intergenic | 50.0% | |
GGATTAGGGTTACATTGCGG+GGG | + | chr5.3:13645679-13645698 | None:intergenic | 50.0% | |
GGGATTAGGGTTACATTGCG+GGG | + | chr5.3:13645680-13645699 | None:intergenic | 50.0% | |
GGGGATTAGGGTTACATTGC+GGG | + | chr5.3:13645681-13645700 | None:intergenic | 50.0% | |
GTCCTTTGTGTTGGACCTGT+GGG | - | chr5.3:13650334-13650353 | MS.gene64856:CDS | 50.0% | |
TACAGGACAAAGGACCTTGG+AGG | - | chr5.3:13650658-13650677 | MS.gene64856:CDS | 50.0% | |
TCAAGTGGCACCAAGAGAAC+AGG | + | chr5.3:13649397-13649416 | None:intergenic | 50.0% | |
TGCATCAACAACCTCTTGGG+TGG | + | chr5.3:13650692-13650711 | None:intergenic | 50.0% | |
TTGAGACTCTCAACGACACC+GGG | + | chr5.3:13646058-13646077 | None:intergenic | 50.0% | |
! | CATTTGCTTATCTCTGGGGG+TGG | - | chr5.3:13648604-13648623 | MS.gene64856:intron | 50.0% |
! | CTGTGGGCTGAATTTGTGGA+AGG | - | chr5.3:13650350-13650369 | MS.gene64856:CDS | 50.0% |
! | GAGGTTGCCACAAAGTATCC+TGG | - | chr5.3:13648093-13648112 | MS.gene64856:intron | 50.0% |
! | GCCACCAGTTTCTAAGGACT+TGG | + | chr5.3:13647169-13647188 | None:intergenic | 50.0% |
! | GCGTGGAGATAAGGTGTTTG+AGG | + | chr5.3:13645598-13645617 | None:intergenic | 50.0% |
! | GTCAAATAACGGGGATGGGT+TGG | - | chr5.3:13650246-13650265 | MS.gene64856:CDS | 50.0% |
! | TTTGAACAAGGTGCTTCCGC+AGG | - | chr5.3:13650484-13650503 | MS.gene64856:CDS | 50.0% |
! | TTTGCTTATCTCTGGGGGTG+GGG | - | chr5.3:13648606-13648625 | MS.gene64856:intron | 50.0% |
!! | AAGGAGAAGTGCCACAGGAT+TGG | + | chr5.3:13650548-13650567 | None:intergenic | 50.0% |
!! | GAAGAAAGGAGAAGTGCCAC+AGG | + | chr5.3:13650553-13650572 | None:intergenic | 50.0% |
ACCAAGAGAACAGGCGGGAA+GGG | + | chr5.3:13649388-13649407 | None:intergenic | 55.0% | |
AGCCCACAGGTCCAACACAA+AGG | + | chr5.3:13650339-13650358 | None:intergenic | 55.0% | |
AGGCAACAGCAGCTGTTGTG+GGG | - | chr5.3:13649989-13650008 | MS.gene64856:intron | 55.0% | |
AGTGGCACCAAGAGAACAGG+CGG | + | chr5.3:13649394-13649413 | None:intergenic | 55.0% | |
CAGCAGCTGTTGTGGGGTAA+TGG | - | chr5.3:13649995-13650014 | MS.gene64856:intron | 55.0% | |
CAGGGCCTTGGAAACAGTGA+TGG | - | chr5.3:13649119-13649138 | MS.gene64856:intron | 55.0% | |
GAGGCAACAGCAGCTGTTGT+GGG | - | chr5.3:13649988-13650007 | MS.gene64856:intron | 55.0% | |
GCATGTAGGTTACGGTACGG+GGG | + | chr5.3:13645637-13645656 | None:intergenic | 55.0% | |
GGAGTTGGGGTAGCAAATGC+TGG | - | chr5.3:13646318-13646337 | MS.gene64856:intron | 55.0% | |
GGCATGTAGGTTACGGTACG+GGG | + | chr5.3:13645638-13645657 | None:intergenic | 55.0% | |
GGGCAGTTGGTCCTTTGTGT+TGG | - | chr5.3:13650325-13650344 | MS.gene64856:CDS | 55.0% | |
GGGCATGTAGGTTACGGTAC+GGG | + | chr5.3:13645639-13645658 | None:intergenic | 55.0% | |
GGGGCATGTAGGTTACGGTA+CGG | + | chr5.3:13645640-13645659 | None:intergenic | 55.0% | |
GGTCCTTTGTGTTGGACCTG+TGG | - | chr5.3:13650333-13650352 | MS.gene64856:CDS | 55.0% | |
GGTGCTTCCGCAGGAAATGT+TGG | - | chr5.3:13650493-13650512 | MS.gene64856:CDS | 55.0% | |
TTACTAGAGGGCAGAGGCAG+AGG | - | chr5.3:13646430-13646449 | MS.gene64856:intron | 55.0% | |
! | AATACAGCGGCAGGCATTGC+TGG | - | chr5.3:13649582-13649601 | MS.gene64856:intron | 55.0% |
! | GGACCTGTGGGCTGAATTTG+TGG | - | chr5.3:13650346-13650365 | MS.gene64856:CDS | 55.0% |
! | TTGCTTATCTCTGGGGGTGG+GGG | - | chr5.3:13648607-13648626 | MS.gene64856:intron | 55.0% |
!! | CGGCAGTGCTGTTTGTAGGA+TGG | - | chr5.3:13650279-13650298 | MS.gene64856:CDS | 55.0% |
!! | CGGTGTCGTTGAGAGTCTCA+AGG | - | chr5.3:13646057-13646076 | MS.gene64856:intron | 55.0% |
ACCCTTCCCGCCTGTTCTCT+TGG | - | chr5.3:13649384-13649403 | MS.gene64856:intron | 60.0% | |
AGGGACAAGCACCACCCAAG+AGG | - | chr5.3:13650678-13650697 | MS.gene64856:CDS | 60.0% | |
CACCAAGAGAACAGGCGGGA+AGG | + | chr5.3:13649389-13649408 | None:intergenic | 60.0% | |
CTAATCCCCGGCGACGGAAT+CGG | - | chr5.3:13645692-13645711 | MS.gene64856:CDS | 60.0% | |
GATTCCGTCGCCGGGGATTA+GGG | + | chr5.3:13645693-13645712 | None:intergenic | 60.0% | |
GGAATCGGCCCTCTCGTAAC+CGG | - | chr5.3:13645707-13645726 | MS.gene64856:CDS | 60.0% | |
GGAGGCAACAGCAGCTGTTG+TGG | - | chr5.3:13649987-13650006 | MS.gene64856:intron | 60.0% | |
GTAACCCTAATCCCCGGCGA+CGG | - | chr5.3:13645686-13645705 | MS.gene64856:CDS | 60.0% | |
GTAGGTTACGGTACGGGGGT+GGG | + | chr5.3:13645633-13645652 | None:intergenic | 60.0% | |
GTGGCACCAAGAGAACAGGC+GGG | + | chr5.3:13649393-13649412 | None:intergenic | 60.0% | |
TGTAGGTTACGGTACGGGGG+TGG | + | chr5.3:13645634-13645653 | None:intergenic | 60.0% | |
!! | AACGGGGATGGGTTGGAGTC+TGG | - | chr5.3:13650253-13650272 | MS.gene64856:CDS | 60.0% |
!! | AGGTGGATTGGCGACTCCGA+TGG | - | chr5.3:13645859-13645878 | MS.gene64856:intron | 60.0% |
!! | CAACAGCGCCGGTTACGAGA+GGG | + | chr5.3:13645718-13645737 | None:intergenic | 60.0% |
!! | GATGGGTTGGAGTCTGGTGG+CGG | - | chr5.3:13650259-13650278 | MS.gene64856:CDS | 60.0% |
!! | GGTGGATTGGCGACTCCGAT+GGG | - | chr5.3:13645860-13645879 | MS.gene64856:intron | 60.0% |
!! | GTGGCGGCAGTGCTGTTTGT+AGG | - | chr5.3:13650275-13650294 | MS.gene64856:CDS | 60.0% |
!! | TCAACAGCGCCGGTTACGAG+AGG | + | chr5.3:13645719-13645738 | None:intergenic | 60.0% |
!! | TGGAGGCACTGGTGTCATGC+CGG | - | chr5.3:13649602-13649621 | MS.gene64856:intron | 60.0% |
ATTGCGGGGGGTTCCGTCTC+CGG | + | chr5.3:13645666-13645685 | None:intergenic | 65.0% | |
CGATTCCGTCGCCGGGGATT+AGG | + | chr5.3:13645694-13645713 | None:intergenic | 65.0% | |
GGGGCGGGGCATGTAGGTTA+CGG | + | chr5.3:13645645-13645664 | None:intergenic | 65.0% | |
GGGTGGTGCTTGTCCCTCCA+AGG | + | chr5.3:13650675-13650694 | None:intergenic | 65.0% | |
GTAACCTACATGCCCCGCCC+CGG | - | chr5.3:13645644-13645663 | MS.gene64856:CDS | 65.0% | |
TTACGGTACGGGGGTGGGTG+AGG | + | chr5.3:13645628-13645647 | None:intergenic | 65.0% | |
TTGGCGACTCCGATGGGTGG+TGG | - | chr5.3:13645866-13645885 | MS.gene64856:intron | 65.0% | |
! | ACAGCGGCAGGCATTGCTGG+AGG | - | chr5.3:13649585-13649604 | MS.gene64856:intron | 65.0% |
! | GCAGGCATTGCTGGAGGCAC+TGG | - | chr5.3:13649591-13649610 | MS.gene64856:intron | 65.0% |
! | GGATTGGCGACTCCGATGGG+TGG | - | chr5.3:13645863-13645882 | MS.gene64856:intron | 65.0% |
! | GGTGGTGGCGCGTGGAGATA+AGG | + | chr5.3:13645607-13645626 | None:intergenic | 65.0% |
!! | GGAGGCACTGGTGTCATGCC+GGG | - | chr5.3:13649603-13649622 | MS.gene64856:intron | 65.0% |
!! | GGGGATGGGTTGGAGTCTGG+TGG | - | chr5.3:13650256-13650275 | MS.gene64856:CDS | 65.0% |
TACATGCCCCGCCCCGGAGA+CGG | - | chr5.3:13645650-13645669 | MS.gene64856:CDS | 70.0% | |
TACGGGGGTGGGTGAGGTGG+TGG | + | chr5.3:13645622-13645641 | None:intergenic | 70.0% | |
TTGCGGGGGGTTCCGTCTCC+GGG | + | chr5.3:13645665-13645684 | None:intergenic | 70.0% | |
! | AGAGGGCCGATTCCGTCGCC+GGG | + | chr5.3:13645701-13645720 | None:intergenic | 70.0% |
! | GAGAGGGCCGATTCCGTCGC+CGG | + | chr5.3:13645702-13645721 | None:intergenic | 70.0% |
!! | GGCACTGGTGTCATGCCGGG+AGG | - | chr5.3:13649606-13649625 | MS.gene64856:intron | 70.0% |
CGGTACGGGGGTGGGTGAGG+TGG | + | chr5.3:13645625-13645644 | None:intergenic | 75.0% | |
GTCTCCGGGGCGGGGCATGT+AGG | + | chr5.3:13645651-13645670 | None:intergenic | 75.0% | |
TGCGGGGGGTTCCGTCTCCG+GGG | + | chr5.3:13645664-13645683 | None:intergenic | 75.0% | |
! | GAGGGCCGATTCCGTCGCCG+GGG | + | chr5.3:13645700-13645719 | None:intergenic | 75.0% |
! | GTGGGTGAGGTGGTGGCGCG+TGG | + | chr5.3:13645615-13645634 | None:intergenic | 75.0% |
! | GGGGGGTTCCGTCTCCGGGG+CGG | + | chr5.3:13645661-13645680 | None:intergenic | 80.0% |
! | GGGGGTTCCGTCTCCGGGGC+GGG | + | chr5.3:13645660-13645679 | None:intergenic | 80.0% |
! | GGGGTTCCGTCTCCGGGGCG+GGG | + | chr5.3:13645659-13645678 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 13645569 | 13650732 | 13645569 | ID=MS.gene64856 |
chr5.3 | mRNA | 13645569 | 13650732 | 13645569 | ID=MS.gene64856.t1;Parent=MS.gene64856 |
chr5.3 | exon | 13650223 | 13650732 | 13650223 | ID=MS.gene64856.t1.exon1;Parent=MS.gene64856.t1 |
chr5.3 | CDS | 13650223 | 13650732 | 13650223 | ID=cds.MS.gene64856.t1;Parent=MS.gene64856.t1 |
chr5.3 | exon | 13648110 | 13648349 | 13648110 | ID=MS.gene64856.t1.exon2;Parent=MS.gene64856.t1 |
chr5.3 | CDS | 13648110 | 13648349 | 13648110 | ID=cds.MS.gene64856.t1;Parent=MS.gene64856.t1 |
chr5.3 | exon | 13646674 | 13646752 | 13646674 | ID=MS.gene64856.t1.exon3;Parent=MS.gene64856.t1 |
chr5.3 | CDS | 13646674 | 13646752 | 13646674 | ID=cds.MS.gene64856.t1;Parent=MS.gene64856.t1 |
chr5.3 | exon | 13645569 | 13645843 | 13645569 | ID=MS.gene64856.t1.exon4;Parent=MS.gene64856.t1 |
chr5.3 | CDS | 13645569 | 13645843 | 13645569 | ID=cds.MS.gene64856.t1;Parent=MS.gene64856.t1 |
Gene Sequence |
Protein sequence |