Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67551.t1 | XP_003612317.1 | 98.9 | 367 | 4 | 0 | 1 | 367 | 1 | 367 | 1.60E-201 | 711.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67551.t1 | P93032 | 82.9 | 362 | 61 | 1 | 3 | 363 | 2 | 363 | 2.9e-167 | 589.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67551.t1 | G7K008 | 98.9 | 367 | 4 | 0 | 1 | 367 | 1 | 367 | 1.2e-201 | 711.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene23789 | MS.gene67551 | PPI |
MS.gene67551 | MS.gene064489 | PPI |
MS.gene48488 | MS.gene67551 | PPI |
MS.gene67551 | MS.gene054629 | PPI |
MS.gene64856 | MS.gene67551 | PPI |
MS.gene017544 | MS.gene67551 | PPI |
MS.gene067451 | MS.gene67551 | PPI |
MS.gene85935 | MS.gene67551 | PPI |
MS.gene38729 | MS.gene67551 | PPI |
MS.gene029815 | MS.gene67551 | PPI |
MS.gene68356 | MS.gene67551 | PPI |
MS.gene86974 | MS.gene67551 | PPI |
MS.gene055904 | MS.gene67551 | PPI |
MS.gene24619 | MS.gene67551 | PPI |
MS.gene27219 | MS.gene67551 | PPI |
MS.gene83571 | MS.gene67551 | PPI |
MS.gene037818 | MS.gene67551 | PPI |
MS.gene65298 | MS.gene67551 | PPI |
MS.gene012996 | MS.gene67551 | PPI |
MS.gene67551 | MS.gene012996 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67551.t1 | MTR_5g023740 | 98.910 | 367 | 4 | 0 | 1 | 367 | 1 | 367 | 0.0 | 744 |
MS.gene67551.t1 | MTR_5g023740 | 97.820 | 367 | 4 | 1 | 1 | 367 | 1 | 363 | 0.0 | 731 |
MS.gene67551.t1 | MTR_8g074030 | 88.710 | 372 | 36 | 2 | 1 | 367 | 1 | 371 | 0.0 | 674 |
MS.gene67551.t1 | MTR_8g074030 | 87.634 | 372 | 36 | 3 | 1 | 367 | 1 | 367 | 0.0 | 662 |
MS.gene67551.t1 | MTR_5g023740 | 98.556 | 277 | 4 | 0 | 1 | 277 | 1 | 277 | 0.0 | 565 |
MS.gene67551.t1 | MTR_5g023740 | 98.556 | 277 | 4 | 0 | 1 | 277 | 1 | 277 | 0.0 | 564 |
MS.gene67551.t1 | MTR_5g023740 | 97.112 | 277 | 4 | 1 | 1 | 277 | 1 | 273 | 0.0 | 553 |
MS.gene67551.t1 | MTR_1g064070 | 48.634 | 366 | 174 | 5 | 6 | 366 | 2 | 358 | 1.69e-118 | 347 |
MS.gene67551.t1 | MTR_3g101470 | 48.732 | 355 | 169 | 3 | 17 | 366 | 7 | 353 | 2.07e-116 | 342 |
MS.gene67551.t1 | MTR_2g104610 | 29.132 | 357 | 197 | 15 | 32 | 349 | 35 | 374 | 9.68e-28 | 112 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67551.t1 | AT4G35260 | 85.246 | 366 | 53 | 1 | 3 | 367 | 2 | 367 | 0.0 | 639 |
MS.gene67551.t1 | AT4G35650 | 81.694 | 366 | 65 | 1 | 4 | 367 | 3 | 368 | 0.0 | 629 |
MS.gene67551.t1 | AT2G17130 | 82.240 | 366 | 64 | 1 | 3 | 367 | 2 | 367 | 0.0 | 619 |
MS.gene67551.t1 | AT2G17130 | 81.148 | 366 | 64 | 2 | 3 | 367 | 2 | 363 | 0.0 | 606 |
MS.gene67551.t1 | AT5G03290 | 51.190 | 336 | 156 | 2 | 36 | 366 | 42 | 374 | 2.98e-117 | 345 |
MS.gene67551.t1 | AT3G09810 | 51.190 | 336 | 156 | 4 | 36 | 366 | 42 | 374 | 1.49e-112 | 333 |
MS.gene67551.t1 | AT1G32480 | 62.500 | 224 | 69 | 5 | 37 | 257 | 2 | 213 | 1.06e-90 | 271 |
MS.gene67551.t1 | AT5G14200 | 28.792 | 389 | 224 | 16 | 1 | 349 | 5 | 380 | 1.86e-30 | 120 |
MS.gene67551.t1 | AT1G80560 | 29.630 | 351 | 197 | 13 | 40 | 354 | 45 | 381 | 1.97e-30 | 120 |
MS.gene67551.t1 | AT5G14200 | 28.792 | 389 | 224 | 16 | 1 | 349 | 5 | 380 | 2.77e-30 | 120 |
MS.gene67551.t1 | AT1G31180 | 28.974 | 390 | 223 | 16 | 1 | 349 | 1 | 377 | 3.63e-30 | 119 |
MS.gene67551.t1 | AT1G31180 | 28.974 | 390 | 223 | 16 | 1 | 349 | 16 | 392 | 6.25e-30 | 119 |
MS.gene67551.t1 | AT5G14200 | 26.596 | 282 | 165 | 10 | 1 | 246 | 5 | 280 | 4.65e-13 | 69.7 |
Find 107 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGATTCCGTCGCCGGGGATT+AGG | 0.169058 | 5.4:+15220710 | None:intergenic |
ATGTTGATATTGTTGTTATT+AGG | 0.236899 | 5.4:-15220414 | MS.gene67551:CDS |
GGGGATTAGGGTTACATTGC+GGG | 0.275523 | 5.4:+15220723 | None:intergenic |
TGTTGATATTGTTGTTATTA+GGG | 0.290952 | 5.4:-15220413 | MS.gene67551:CDS |
GCTTGCAGATGGTTTATTCT+TGG | 0.304514 | 5.4:-15218341 | MS.gene67551:CDS |
GGAATCGATTAAGAAGAATA+AGG | 0.340964 | 5.4:-15220575 | MS.gene67551:CDS |
GATTCCGTCGCCGGGGATTA+GGG | 0.344303 | 5.4:+15220711 | None:intergenic |
GTGGGTGAGGTGGTGGCGCG+TGG | 0.349708 | 5.4:+15220789 | None:intergenic |
AACAAGATTTCCATAAAGAT+TGG | 0.353298 | 5.4:+15216844 | None:intergenic |
CTTGAACATGAGGTTGTTCC+CGG | 0.354977 | 5.4:-15220364 | MS.gene67551:CDS |
GTCAATTGCTTTAATCTTGA+GGG | 0.368284 | 5.4:-15220457 | MS.gene67551:CDS |
AATACAGCGGCAGGCATTGC+TGG | 0.369556 | 5.4:-15216818 | MS.gene67551:CDS |
ATCTTGAGGGATTGACTACT+AGG | 0.383171 | 5.4:-15220444 | MS.gene67551:CDS |
AAGAATAAGGTTTGTTTGAA+AGG | 0.390329 | 5.4:-15220562 | MS.gene67551:CDS |
ATTTCATTATACTTGATTCC+AGG | 0.392374 | 5.4:+15218289 | None:intergenic |
ACAAGATTTCCATAAAGATT+GGG | 0.395363 | 5.4:+15216845 | None:intergenic |
GGGGTTCCGTCTCCGGGGCG+GGG | 0.409508 | 5.4:+15220745 | None:intergenic |
GGCATGTAGGTTACGGTACG+GGG | 0.414877 | 5.4:+15220766 | None:intergenic |
TCCAATCGTTCAGCAAATAC+AGG | 0.416645 | 5.4:+15215797 | None:intergenic |
GGGATTAGGGTTACATTGCG+GGG | 0.421936 | 5.4:+15220724 | None:intergenic |
ATGTCTTTGCAGGTAATGTT+GGG | 0.422079 | 5.4:-15215952 | MS.gene67551:intron |
GGAATCGGCCCTCTCGTAAC+CGG | 0.429953 | 5.4:-15220694 | MS.gene67551:CDS |
GGGCATGTAGGTTACGGTAC+GGG | 0.430343 | 5.4:+15220765 | None:intergenic |
CTTGATTCCAGGATACTTTG+TGG | 0.435276 | 5.4:+15218300 | None:intergenic |
TCCTGTATTTGCTGAACGAT+TGG | 0.436123 | 5.4:-15215798 | MS.gene67551:CDS |
GCAGGCATTGCTGGAGGCAC+TGG | 0.441704 | 5.4:-15216809 | MS.gene67551:CDS |
CTAATCCCCGGCGACGGAAT+CGG | 0.445934 | 5.4:-15220709 | MS.gene67551:CDS |
CGGGGATTAGGGTTACATTG+CGG | 0.449437 | 5.4:+15220722 | None:intergenic |
GTCTCCGGGGCGGGGCATGT+AGG | 0.455315 | 5.4:+15220753 | None:intergenic |
TCGAATTTCTCGAAGTGCAC+TGG | 0.458066 | 5.4:+15220637 | None:intergenic |
GGAGGCACTGGTGTCATGCC+GGG | 0.461037 | 5.4:-15216797 | MS.gene67551:CDS |
TACTGCATCAACAACCTCTT+GGG | 0.461914 | 5.4:+15215706 | None:intergenic |
GGGTGGTGCTTGTCCCTCCA+AGG | 0.470554 | 5.4:+15215726 | None:intergenic |
ATCGATTCCATCACTTCAGA+TGG | 0.475497 | 5.4:+15220589 | None:intergenic |
TTACTGCATCAACAACCTCT+TGG | 0.475996 | 5.4:+15215705 | None:intergenic |
AGAGGGCCGATTCCGTCGCC+GGG | 0.478788 | 5.4:+15220703 | None:intergenic |
AATAAGGTTTGTTTGAAAGG+TGG | 0.479450 | 5.4:-15220559 | MS.gene67551:CDS |
TGTCAATTGCTTTAATCTTG+AGG | 0.482650 | 5.4:-15220458 | MS.gene67551:CDS |
GCCTGAGCAATTTGATGTCA+TGG | 0.486144 | 5.4:-15218230 | MS.gene67551:intron |
CTTGTTGCAAATACAGCGGC+AGG | 0.486316 | 5.4:-15216827 | MS.gene67551:CDS |
AAGGAGAAGTGCCACAGGAT+TGG | 0.491158 | 5.4:+15215853 | None:intergenic |
AAGGTGTTTGAGGAGGTTTG+TGG | 0.493042 | 5.4:+15220816 | None:intergenic |
GAGAGGGCCGATTCCGTCGC+CGG | 0.493954 | 5.4:+15220702 | None:intergenic |
GGATTAGGGTTACATTGCGG+GGG | 0.495232 | 5.4:+15220725 | None:intergenic |
TGGAGGCACTGGTGTCATGC+CGG | 0.510683 | 5.4:-15216798 | MS.gene67551:CDS |
GGTTTGTTTGAAAGGTGGAT+TGG | 0.511723 | 5.4:-15220554 | MS.gene67551:CDS |
TTGGCGACTCCGATGGGTGG+TGG | 0.513125 | 5.4:-15220535 | MS.gene67551:CDS |
GAGGTTGCCACAAAGTATCC+TGG | 0.516332 | 5.4:-15218307 | MS.gene67551:CDS |
CATTACTTGCTCAACAGCGC+CGG | 0.519638 | 5.4:+15220675 | None:intergenic |
GCGTGGAGATAAGGTGTTTG+AGG | 0.525687 | 5.4:+15220806 | None:intergenic |
AATGTCTTTGCAGGTAATGT+TGG | 0.527179 | 5.4:-15215953 | MS.gene67551:intron |
CAAGATTTCCATAAAGATTG+GGG | 0.528612 | 5.4:+15216846 | None:intergenic |
GCTTAATTTGCAGCTGAGGA+AGG | 0.528655 | 5.4:-15220503 | MS.gene67551:CDS |
TGAGCATCATTGCGGAAGAA+AGG | 0.530564 | 5.4:+15215834 | None:intergenic |
GGGGCGGGGCATGTAGGTTA+CGG | 0.533314 | 5.4:+15220759 | None:intergenic |
TACATGCCCCGCCCCGGAGA+CGG | 0.536211 | 5.4:-15220751 | MS.gene67551:CDS |
TTTGAACAAGGTGCTTCCGC+AGG | 0.536373 | 5.4:-15215914 | MS.gene67551:CDS |
GTTATTAGGGAGAATACTGA+AGG | 0.537381 | 5.4:-15220400 | MS.gene67551:CDS |
GGTGGTGGCGCGTGGAGATA+AGG | 0.541475 | 5.4:+15220797 | None:intergenic |
CGGCGCTGTTGAGCAAGTAA+TGG | 0.541644 | 5.4:-15220674 | MS.gene67551:CDS |
GGTGGATTGGCGACTCCGAT+GGG | 0.544930 | 5.4:-15220541 | MS.gene67551:CDS |
TTGAGACTCTCAACGACACC+GGG | 0.546059 | 5.4:+15220346 | None:intergenic |
AGCGATTCCATCTGAAGTGA+TGG | 0.550636 | 5.4:-15220596 | MS.gene67551:CDS |
AGGTGGATTGGCGACTCCGA+TGG | 0.556949 | 5.4:-15220542 | MS.gene67551:CDS |
AACATTATGAAGCTTGCAGA+TGG | 0.557251 | 5.4:-15218352 | MS.gene67551:CDS |
ACCATGACATCAAATTGCTC+AGG | 0.558319 | 5.4:+15218229 | None:intergenic |
GGTGCTTCCGCAGGAAATGT+TGG | 0.560130 | 5.4:-15215905 | MS.gene67551:CDS |
GATTAGGGTTACATTGCGGG+GGG | 0.563580 | 5.4:+15220726 | None:intergenic |
CGCAATGTAACCCTAATCCC+CGG | 0.573917 | 5.4:-15220721 | MS.gene67551:CDS |
TTCCGCAGGAAATGTTGGTA+AGG | 0.574592 | 5.4:-15215900 | MS.gene67551:CDS |
AATACTGAAGGGGAATATGC+TGG | 0.581107 | 5.4:-15220388 | MS.gene67551:CDS |
CTTGAGACTCTCAACGACAC+CGG | 0.585873 | 5.4:+15220345 | None:intergenic |
ATTCTTGGAATCTTGTCGAG+AGG | 0.590626 | 5.4:-15218326 | MS.gene67551:CDS |
GGATTGGCGACTCCGATGGG+TGG | 0.593367 | 5.4:-15220538 | MS.gene67551:CDS |
GTAACCCTAATCCCCGGCGA+CGG | 0.593645 | 5.4:-15220715 | MS.gene67551:CDS |
TACAGGACAAAGGACCTTGG+AGG | 0.595343 | 5.4:-15215740 | MS.gene67551:CDS |
GTATCTAAATAACAGAAAGA+AGG | 0.597022 | 5.4:-15218395 | MS.gene67551:CDS |
GTTCGCTTAATTTGCAGCTG+AGG | 0.597579 | 5.4:-15220507 | MS.gene67551:CDS |
GGGGCATGTAGGTTACGGTA+CGG | 0.599567 | 5.4:+15220764 | None:intergenic |
TGGAGATAAGGTGTTTGAGG+AGG | 0.600685 | 5.4:+15220809 | None:intergenic |
GCATGTAGGTTACGGTACGG+GGG | 0.601867 | 5.4:+15220767 | None:intergenic |
TTCGAGAAATTCGAAGTGCA+TGG | 0.602914 | 5.4:-15220628 | MS.gene67551:CDS |
GTAACCTACATGCCCCGCCC+CGG | 0.604970 | 5.4:-15220757 | MS.gene67551:CDS |
GAAGAAAGGAGAAGTGCCAC+AGG | 0.610058 | 5.4:+15215848 | None:intergenic |
TGCATCAACAACCTCTTGGG+TGG | 0.620983 | 5.4:+15215709 | None:intergenic |
CAACAGCGCCGGTTACGAGA+GGG | 0.629447 | 5.4:+15220686 | None:intergenic |
CGGTGTCGTTGAGAGTCTCA+AGG | 0.630865 | 5.4:-15220344 | MS.gene67551:intron |
ACAGGACAAAGGACCTTGGA+GGG | 0.632351 | 5.4:-15215739 | MS.gene67551:CDS |
GGCACTGGTGTCATGCCGGG+AGG | 0.634816 | 5.4:-15216794 | MS.gene67551:intron |
TATTAGGGAGAATACTGAAG+GGG | 0.638863 | 5.4:-15220398 | MS.gene67551:CDS |
ACAGCGGCAGGCATTGCTGG+AGG | 0.645225 | 5.4:-15216815 | MS.gene67551:CDS |
CACCTTGTTCAAATACAGCA+TGG | 0.646572 | 5.4:+15215924 | None:intergenic |
AAGTACAGGACAAAGGACCT+TGG | 0.646920 | 5.4:-15215743 | MS.gene67551:CDS |
TTCCTTACCAACATTTCCTG+CGG | 0.649166 | 5.4:+15215898 | None:intergenic |
TCAACAGCGCCGGTTACGAG+AGG | 0.650212 | 5.4:+15220685 | None:intergenic |
TTATTAGGGAGAATACTGAA+GGG | 0.651297 | 5.4:-15220399 | MS.gene67551:CDS |
ATATGCTGGTCTTGAACATG+AGG | 0.652648 | 5.4:-15220374 | MS.gene67551:CDS |
TGTCTTTGCAGGTAATGTTG+GGG | 0.652865 | 5.4:-15215951 | MS.gene67551:intron |
AGAGGGTAAGTACAGGACAA+AGG | 0.652879 | 5.4:-15215750 | MS.gene67551:CDS |
GAACTAACACCACCACCCAT+CGG | 0.665416 | 5.4:+15220526 | None:intergenic |
AAGATTTCCATAAAGATTGG+GGG | 0.670781 | 5.4:+15216847 | None:intergenic |
GACCATGCTGTATTTGAACA+AGG | 0.680946 | 5.4:-15215926 | MS.gene67551:CDS |
AAGATGTCTGAGCATCATTG+CGG | 0.685294 | 5.4:+15215826 | None:intergenic |
GAGGGCCGATTCCGTCGCCG+GGG | 0.686332 | 5.4:+15220704 | None:intergenic |
AGGGACAAGCACCACCCAAG+AGG | 0.691399 | 5.4:-15215720 | MS.gene67551:CDS |
AGAAAAGAAAGCCAATCCTG+TGG | 0.714161 | 5.4:-15215864 | MS.gene67551:CDS |
AAATCTTGTTGCAAATACAG+CGG | 0.734643 | 5.4:-15216831 | MS.gene67551:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTAAATTAATTAATTAA+TGG | - | chr5.4:15216264-15216283 | MS.gene67551:intron | 0.0% |
!!! | TTTTTTTAAATAAAAAAATT+TGG | - | chr5.4:15218399-15218418 | MS.gene67551:CDS | 0.0% |
!! | TAATTAAATATGATAAAAGT+TGG | + | chr5.4:15217531-15217550 | None:intergenic | 10.0% |
!!! | ATTTTTTTTTGCTTATAATA+TGG | - | chr5.4:15217747-15217766 | MS.gene67551:intron | 10.0% |
!!! | TTTTTTTTTGCTTATAATAT+GGG | - | chr5.4:15217748-15217767 | MS.gene67551:intron | 10.0% |
!! | ATATAATACATTCATTCTTA+CGG | - | chr5.4:15217363-15217382 | MS.gene67551:intron | 15.0% |
!! | ATTCTAATGAAAATATAGAT+AGG | - | chr5.4:15220426-15220445 | MS.gene67551:CDS | 15.0% |
!! | TTCTAATGAAAATATAGATA+GGG | - | chr5.4:15220427-15220446 | MS.gene67551:CDS | 15.0% |
!! | TTGTAATAATGAATACAAAA+GGG | - | chr5.4:15219479-15219498 | MS.gene67551:intron | 15.0% |
!! | TTTGTAATAATGAATACAAA+AGG | - | chr5.4:15219478-15219497 | MS.gene67551:intron | 15.0% |
!!! | CATCATAATTTTTTTAACAT+AGG | - | chr5.4:15219262-15219281 | MS.gene67551:intron | 15.0% |
!!! | GTTTTTTTTGCTTATAATTT+AGG | + | chr5.4:15217473-15217492 | None:intergenic | 15.0% |
!!! | TATATTTCCTTTTATTACTT+TGG | - | chr5.4:15218485-15218504 | MS.gene67551:intron | 15.0% |
!!! | TATTTAATTAGGTTTTGATA+TGG | - | chr5.4:15219371-15219390 | MS.gene67551:intron | 15.0% |
!!! | TTTAATCAATCACTATATTT+TGG | + | chr5.4:15219995-15220014 | None:intergenic | 15.0% |
!! | AAGACTCAAATAATTATCTT+TGG | + | chr5.4:15218621-15218640 | None:intergenic | 20.0% |
!! | AATATTCAAATGTGATAGTT+TGG | + | chr5.4:15216338-15216357 | None:intergenic | 20.0% |
!! | CGTATAATTAGATTAAACTA+GGG | + | chr5.4:15219290-15219309 | None:intergenic | 20.0% |
!! | GAATATACTTTGTATTTAAC+AGG | - | chr5.4:15217059-15217078 | MS.gene67551:intron | 20.0% |
!! | TAATCTTGATACAATTAAGA+TGG | - | chr5.4:15216365-15216384 | MS.gene67551:intron | 20.0% |
!! | TAATTCTCCAAAGTAATAAA+AGG | + | chr5.4:15218495-15218514 | None:intergenic | 20.0% |
!! | TATCTATACAGCAAATATAA+AGG | + | chr5.4:15217949-15217968 | None:intergenic | 20.0% |
!! | TCAATGAAAACAAAAAATAG+AGG | - | chr5.4:15220030-15220049 | MS.gene67551:intron | 20.0% |
!! | TCGTATAATTAGATTAAACT+AGG | + | chr5.4:15219291-15219310 | None:intergenic | 20.0% |
!! | TGTAATAATGAATACAAAAG+GGG | - | chr5.4:15219480-15219499 | MS.gene67551:intron | 20.0% |
!! | TTACAATAAACAACCTTTAA+AGG | + | chr5.4:15217867-15217886 | None:intergenic | 20.0% |
!! | TTCCTATAAAACTTATTTCA+AGG | - | chr5.4:15217665-15217684 | MS.gene67551:intron | 20.0% |
!! | TTCTTTCAATCAATTATTTC+AGG | - | chr5.4:15219942-15219961 | MS.gene67551:intron | 20.0% |
!! | TTGAAATTAAGAAAACATTG+AGG | - | chr5.4:15219533-15219552 | MS.gene67551:intron | 20.0% |
!! | TTGAAATTTGAATCATTTCA+TGG | - | chr5.4:15216851-15216870 | MS.gene67551:CDS | 20.0% |
!! | TTTCTTAACAATTTCTCTTA+TGG | + | chr5.4:15216588-15216607 | None:intergenic | 20.0% |
!!! | AATGTTTTCTTAATTTCAAG+TGG | + | chr5.4:15219532-15219551 | None:intergenic | 20.0% |
!!! | ATCCTTGAAATAAGTTTTAT+AGG | + | chr5.4:15217670-15217689 | None:intergenic | 20.0% |
!!! | ATGTTGATATTGTTGTTATT+AGG | - | chr5.4:15216106-15216125 | MS.gene67551:intron | 20.0% |
!!! | CAAAAAATTATCTTTTCCAA+AGG | - | chr5.4:15217559-15217578 | MS.gene67551:intron | 20.0% |
!!! | CAACTTTTTCAATTAAATTG+TGG | - | chr5.4:15218448-15218467 | MS.gene67551:CDS | 20.0% |
!!! | GTCTTTTTTGCTTATAATTT+GGG | + | chr5.4:15217509-15217528 | None:intergenic | 20.0% |
!!! | TGTTGATATTGTTGTTATTA+GGG | - | chr5.4:15216107-15216126 | MS.gene67551:intron | 20.0% |
!!! | TTAACTTTTGTCATTTGAAA+AGG | - | chr5.4:15219338-15219357 | MS.gene67551:intron | 20.0% |
!!! | TTTTTGAAAGCAAATTAAAC+AGG | - | chr5.4:15218689-15218708 | MS.gene67551:intron | 20.0% |
!!! | TTTTTGCTTATAATTTAGGA+CGG | + | chr5.4:15217469-15217488 | None:intergenic | 20.0% |
! | AAAAAGAAAATCTAGGAAGA+AGG | - | chr5.4:15219193-15219212 | MS.gene67551:intron | 25.0% |
! | AAAAATGTTTAAACAAGTGC+TGG | + | chr5.4:15218384-15218403 | None:intergenic | 25.0% |
! | AAAATCAAAAGCAAAATGAC+TGG | + | chr5.4:15219614-15219633 | None:intergenic | 25.0% |
! | AAATCAAAAGCAAAATGACT+GGG | + | chr5.4:15219613-15219632 | None:intergenic | 25.0% |
! | AACAAGATTTCCATAAAGAT+TGG | + | chr5.4:15219679-15219698 | None:intergenic | 25.0% |
! | ACAAGATTTCCATAAAGATT+GGG | + | chr5.4:15219678-15219697 | None:intergenic | 25.0% |
! | ATACACTGCTAAAATATTGA+AGG | + | chr5.4:15220249-15220268 | None:intergenic | 25.0% |
! | ATGAAAACAAAAAATAGAGG+TGG | - | chr5.4:15220033-15220052 | MS.gene67551:intron | 25.0% |
! | ATTTCATTATACTTGATTCC+AGG | + | chr5.4:15218234-15218253 | None:intergenic | 25.0% |
! | ATTTGATAAGAAAAATGCCA+CGG | + | chr5.4:15219814-15219833 | None:intergenic | 25.0% |
! | CCAAAAGTGGATAAATAATT+GGG | + | chr5.4:15218344-15218363 | None:intergenic | 25.0% |
! | GATGTAAAAACAATTTCCAT+TGG | + | chr5.4:15217645-15217664 | None:intergenic | 25.0% |
! | GTATCTAAATAACAGAAAGA+AGG | - | chr5.4:15218125-15218144 | MS.gene67551:intron | 25.0% |
! | GTTGGATGTTGTATTTAATT+AGG | - | chr5.4:15219360-15219379 | MS.gene67551:intron | 25.0% |
! | GTTTAATCTAATTATACGAG+AGG | - | chr5.4:15219292-15219311 | MS.gene67551:intron | 25.0% |
! | TTAGTAATATTTATACCTCC+CGG | + | chr5.4:15219744-15219763 | None:intergenic | 25.0% |
! | TTATTGTCGTGAGTTAATAA+GGG | + | chr5.4:15216677-15216696 | None:intergenic | 25.0% |
! | TTCCCATCTACAAATTAATT+AGG | - | chr5.4:15217146-15217165 | MS.gene67551:intron | 25.0% |
! | TTTATTGTCGTGAGTTAATA+AGG | + | chr5.4:15216678-15216697 | None:intergenic | 25.0% |
!! | AAACAATTTCCATTGGTTAT+TGG | + | chr5.4:15217638-15217657 | None:intergenic | 25.0% |
!! | AAGAATAAGGTTTGTTTGAA+AGG | - | chr5.4:15215958-15215977 | MS.gene67551:intron | 25.0% |
!! | ATGTATAATTTGCGTGTTTA+TGG | - | chr5.4:15216987-15217006 | MS.gene67551:intron | 25.0% |
!! | ATTAGGAGGTTTAATTTCTT+CGG | - | chr5.4:15217163-15217182 | MS.gene67551:intron | 25.0% |
!! | GTTACAGTTAAGTGATTTTT+CGG | - | chr5.4:15216723-15216742 | MS.gene67551:intron | 25.0% |
!! | TTGTTAGACATATTTTGCAT+CGG | - | chr5.4:15217108-15217127 | MS.gene67551:intron | 25.0% |
!!! | CTCCTAATTAATTTGTAGAT+GGG | + | chr5.4:15217151-15217170 | None:intergenic | 25.0% |
!!! | CTTTGCATTTAATTTTCCTT+TGG | + | chr5.4:15217578-15217597 | None:intergenic | 25.0% |
!!! | GAAGGTTGATTTTTCATTAA+TGG | + | chr5.4:15220231-15220250 | None:intergenic | 25.0% |
!!! | GGTCTTTTTTGCTTATAATT+TGG | + | chr5.4:15217510-15217529 | None:intergenic | 25.0% |
AAATCTTGTTGCAAATACAG+CGG | - | chr5.4:15219689-15219708 | MS.gene67551:intron | 30.0% | |
AAGATTTCCATAAAGATTGG+GGG | + | chr5.4:15219676-15219695 | None:intergenic | 30.0% | |
AATAGTATCTTGCTTCCATA+TGG | - | chr5.4:15219831-15219850 | MS.gene67551:intron | 30.0% | |
AATCGAGATATTCAAGCTTA+AGG | + | chr5.4:15220538-15220557 | None:intergenic | 30.0% | |
AATTTCTCTTATGGTTCTCT+AGG | + | chr5.4:15216579-15216598 | None:intergenic | 30.0% | |
AGGAAATATAAACAGACACA+TGG | + | chr5.4:15218475-15218494 | None:intergenic | 30.0% | |
ATAAACATATCAGCCAAAAG+TGG | + | chr5.4:15218357-15218376 | None:intergenic | 30.0% | |
ATTCAAGCTTAAGGTTAAAG+TGG | + | chr5.4:15220529-15220548 | None:intergenic | 30.0% | |
ATTCATTTATCTTCCTCAAC+AGG | - | chr5.4:15220075-15220094 | MS.gene67551:intron | 30.0% | |
ATTTGAATCATTTCATGGCT+AGG | - | chr5.4:15216856-15216875 | MS.gene67551:intron | 30.0% | |
CAAGATTTCCATAAAGATTG+GGG | + | chr5.4:15219677-15219696 | None:intergenic | 30.0% | |
CCATCTACAAATTAATTAGG+AGG | - | chr5.4:15217149-15217168 | MS.gene67551:intron | 30.0% | |
CTGCTAATTTGAGTAATTTC+TGG | - | chr5.4:15219070-15219089 | MS.gene67551:intron | 30.0% | |
CTTTAGTTGAGTCAAATAAC+GGG | - | chr5.4:15220358-15220377 | MS.gene67551:CDS | 30.0% | |
CTTTCTTGCTAGTAATTGAT+TGG | - | chr5.4:15219580-15219599 | MS.gene67551:intron | 30.0% | |
GCCAAAAGTGGATAAATAAT+TGG | + | chr5.4:15218345-15218364 | None:intergenic | 30.0% | |
GCTAACTAAAAGAAAAGTAG+TGG | - | chr5.4:15217422-15217441 | MS.gene67551:intron | 30.0% | |
GCTTTAGTTGAGTCAAATAA+CGG | - | chr5.4:15220357-15220376 | MS.gene67551:CDS | 30.0% | |
GGAAATATAAACAGACACAT+GGG | + | chr5.4:15218474-15218493 | None:intergenic | 30.0% | |
GGAAATTTCCAATCATCTTT+GGG | - | chr5.4:15217384-15217403 | MS.gene67551:intron | 30.0% | |
GGAATCGATTAAGAAGAATA+AGG | - | chr5.4:15215945-15215964 | MS.gene67551:intron | 30.0% | |
GGACTATTCTTTAAATGTAG+AGG | - | chr5.4:15217916-15217935 | MS.gene67551:intron | 30.0% | |
GGATAAATAATTGGGATTCA+GGG | + | chr5.4:15218336-15218355 | None:intergenic | 30.0% | |
GTCAATTGCTTTAATCTTGA+GGG | - | chr5.4:15216063-15216082 | MS.gene67551:intron | 30.0% | |
TACAATGCTACTCATTTATC+CGG | + | chr5.4:15218577-15218596 | None:intergenic | 30.0% | |
TATTACCAGTGAATGCAATA+CGG | + | chr5.4:15217332-15217351 | None:intergenic | 30.0% | |
TCAAATTAGCAGAAACAGAA+AGG | + | chr5.4:15219062-15219081 | None:intergenic | 30.0% | |
TCATCTCACAAGAAAAAACT+TGG | - | chr5.4:15216931-15216950 | MS.gene67551:intron | 30.0% | |
TCTCAATAACCAATAACCAA+TGG | - | chr5.4:15217626-15217645 | MS.gene67551:intron | 30.0% | |
TCTTGATACAATTAAGATGG+TGG | - | chr5.4:15216368-15216387 | MS.gene67551:intron | 30.0% | |
TGGATAAATAATTGGGATTC+AGG | + | chr5.4:15218337-15218356 | None:intergenic | 30.0% | |
TGTCAATTGCTTTAATCTTG+AGG | - | chr5.4:15216062-15216081 | MS.gene67551:intron | 30.0% | |
TTATTAGGGAGAATACTGAA+GGG | - | chr5.4:15216121-15216140 | MS.gene67551:intron | 30.0% | |
TTTAGTTGAGTCAAATAACG+GGG | - | chr5.4:15220359-15220378 | MS.gene67551:CDS | 30.0% | |
! | AAGAATAGTCCTCTAAGAAA+CGG | + | chr5.4:15217907-15217926 | None:intergenic | 30.0% |
! | AATAAGGTTTGTTTGAAAGG+TGG | - | chr5.4:15215961-15215980 | MS.gene67551:intron | 30.0% |
! | AATGCTATTTGGTAATATGC+GGG | - | chr5.4:15217243-15217262 | MS.gene67551:intron | 30.0% |
! | ATTTTGCATCGGAAATTTGT+GGG | - | chr5.4:15217119-15217138 | MS.gene67551:intron | 30.0% |
! | CCCAATTATTTATCCACTTT+TGG | - | chr5.4:15218341-15218360 | MS.gene67551:CDS | 30.0% |
! | CTAGATTTTCTTTTTGTGCA+GGG | + | chr5.4:15219188-15219207 | None:intergenic | 30.0% |
! | GAATGCTATTTGGTAATATG+CGG | - | chr5.4:15217242-15217261 | MS.gene67551:intron | 30.0% |
! | GTTTAATTTCTTCGGTGAAA+TGG | - | chr5.4:15217171-15217190 | MS.gene67551:intron | 30.0% |
! | TATTTTGCATCGGAAATTTG+TGG | - | chr5.4:15217118-15217137 | MS.gene67551:intron | 30.0% |
! | TGGTAGTGACAACATATAAT+TGG | - | chr5.4:15220148-15220167 | MS.gene67551:intron | 30.0% |
! | TGTATGAGATTTTCTATCGT+TGG | - | chr5.4:15218650-15218669 | MS.gene67551:intron | 30.0% |
! | TTTTATGTGTACTCACTCAT+TGG | - | chr5.4:15216821-15216840 | MS.gene67551:CDS | 30.0% |
!! | AGTATCTATTTCTGTTGAAC+TGG | + | chr5.4:15219407-15219426 | None:intergenic | 30.0% |
!! | ATTTGGTGCTATTAGTTTGT+TGG | - | chr5.4:15218416-15218435 | MS.gene67551:CDS | 30.0% |
!! | ATTTGTTATACTTCCTCAGA+GGG | + | chr5.4:15219449-15219468 | None:intergenic | 30.0% |
!! | CCTCCTAATTAATTTGTAGA+TGG | + | chr5.4:15217152-15217171 | None:intergenic | 30.0% |
!! | CTTTTGTCATTTGAAAAGGT+TGG | - | chr5.4:15219342-15219361 | MS.gene67551:intron | 30.0% |
!!! | ATGAAGGAAACTTTTTTGAG+AGG | - | chr5.4:15218760-15218779 | MS.gene67551:intron | 30.0% |
AACATTATGAAGCTTGCAGA+TGG | - | chr5.4:15218168-15218187 | MS.gene67551:intron | 35.0% | |
AAGATGTGGAAATTCGACTT+AGG | - | chr5.4:15216464-15216483 | MS.gene67551:intron | 35.0% | |
AATGTCTTTGCAGGTAATGT+TGG | - | chr5.4:15220567-15220586 | MS.gene67551:CDS | 35.0% | |
ACTTCTAAGTCCTTAGAAAC+TGG | - | chr5.4:15217280-15217299 | MS.gene67551:intron | 35.0% | |
AGATATTTCCCGTTTCTTAG+AGG | - | chr5.4:15217895-15217914 | MS.gene67551:intron | 35.0% | |
AGCTTGAATATCTCGATTCA+TGG | - | chr5.4:15220540-15220559 | MS.gene67551:CDS | 35.0% | |
AGGAATGACAACATTAGAGA+GGG | - | chr5.4:15216416-15216435 | MS.gene67551:intron | 35.0% | |
AGGTGGTATAGAAATCAAAC+TGG | - | chr5.4:15220050-15220069 | MS.gene67551:intron | 35.0% | |
ATGTCTTTGCAGGTAATGTT+GGG | - | chr5.4:15220568-15220587 | MS.gene67551:CDS | 35.0% | |
ATTACCAGTGAATGCAATAC+GGG | + | chr5.4:15217331-15217350 | None:intergenic | 35.0% | |
CAAGAAAAAACTTGGATTGC+TGG | - | chr5.4:15216939-15216958 | MS.gene67551:intron | 35.0% | |
CCTAGCAAAATTTGAGTATG+AGG | + | chr5.4:15218053-15218072 | None:intergenic | 35.0% | |
CCTGCACAAAAAGAAAATCT+AGG | - | chr5.4:15219186-15219205 | MS.gene67551:intron | 35.0% | |
CGGAAATTTCCAATCATCTT+TGG | - | chr5.4:15217383-15217402 | MS.gene67551:intron | 35.0% | |
GAAAATATAGATAGGGCAGT+TGG | - | chr5.4:15220434-15220453 | MS.gene67551:CDS | 35.0% | |
GAAAGCAAATTAAACAGGAG+TGG | - | chr5.4:15218694-15218713 | MS.gene67551:intron | 35.0% | |
GAATACTTATTGGGTAGCAA+AGG | + | chr5.4:15219156-15219175 | None:intergenic | 35.0% | |
GAATGAAACAGCATTTGTGT+AGG | - | chr5.4:15219215-15219234 | MS.gene67551:intron | 35.0% | |
GGATAAGAGAACTTACTAGA+GGG | - | chr5.4:15216537-15216556 | MS.gene67551:intron | 35.0% | |
GTTATTAGGGAGAATACTGA+AGG | - | chr5.4:15216120-15216139 | MS.gene67551:intron | 35.0% | |
GTTTATCATCTGAGAAGCTA+AGG | + | chr5.4:15217309-15217328 | None:intergenic | 35.0% | |
TAGGAATGACAACATTAGAG+AGG | - | chr5.4:15216415-15216434 | MS.gene67551:intron | 35.0% | |
TATTAGGGAGAATACTGAAG+GGG | - | chr5.4:15216122-15216141 | MS.gene67551:intron | 35.0% | |
TCAAGTATCCCAAAGATGAT+TGG | + | chr5.4:15217395-15217414 | None:intergenic | 35.0% | |
TGCTTATAATATGGGACAGA+GGG | - | chr5.4:15217756-15217775 | MS.gene67551:intron | 35.0% | |
TGGATAAGAGAACTTACTAG+AGG | - | chr5.4:15216536-15216555 | MS.gene67551:intron | 35.0% | |
TGGCTCGTTGAATACTTATT+GGG | + | chr5.4:15219165-15219184 | None:intergenic | 35.0% | |
TTAAACAACAGAGAAACCCA+TGG | + | chr5.4:15218528-15218547 | None:intergenic | 35.0% | |
TTGCTTATAATATGGGACAG+AGG | - | chr5.4:15217755-15217774 | MS.gene67551:intron | 35.0% | |
! | AATTGCTTGTACCTTTTGCA+TGG | - | chr5.4:15217025-15217044 | MS.gene67551:intron | 35.0% |
! | AGAATAGTCCTCTAAGAAAC+GGG | + | chr5.4:15217906-15217925 | None:intergenic | 35.0% |
! | CCTAGATTTTCTTTTTGTGC+AGG | + | chr5.4:15219189-15219208 | None:intergenic | 35.0% |
! | CCTCATACTCAAATTTTGCT+AGG | - | chr5.4:15218050-15218069 | MS.gene67551:intron | 35.0% |
! | CTCTGAGGAAGTATAACAAA+TGG | - | chr5.4:15219448-15219467 | MS.gene67551:intron | 35.0% |
! | CTTTTGCATGGTAGATAACT+CGG | - | chr5.4:15217037-15217056 | MS.gene67551:intron | 35.0% |
! | GTAGAAATTGTGATAACGTG+TGG | - | chr5.4:15216791-15216810 | MS.gene67551:intron | 35.0% |
! | TGCTTATAATTTAGGACGGA+GGG | + | chr5.4:15217465-15217484 | None:intergenic | 35.0% |
! | TTGCTTATAATTTAGGACGG+AGG | + | chr5.4:15217466-15217485 | None:intergenic | 35.0% |
! | TTTCTTCGGTGAAATGGATT+CGG | - | chr5.4:15217177-15217196 | MS.gene67551:intron | 35.0% |
! | TTTTGCATCGGAAATTTGTG+GGG | - | chr5.4:15217120-15217139 | MS.gene67551:intron | 35.0% |
!! | ATCATCTTTGGGATACTTGA+TGG | - | chr5.4:15217395-15217414 | MS.gene67551:intron | 35.0% |
!! | CATTTGTTATACTTCCTCAG+AGG | + | chr5.4:15219450-15219469 | None:intergenic | 35.0% |
!! | CTATCGTTGGTTCAATCAAA+AGG | - | chr5.4:15218663-15218682 | MS.gene67551:intron | 35.0% |
!! | GTGAAACGAGTCATTTTAGA+GGG | - | chr5.4:15220753-15220772 | MS.gene67551:CDS | 35.0% |
!! | TAAACACTATTTCTGCTTGC+AGG | - | chr5.4:15219647-15219666 | MS.gene67551:intron | 35.0% |
!! | TCATTTTAGAGGGTAAGTAC+AGG | - | chr5.4:15220763-15220782 | MS.gene67551:CDS | 35.0% |
!! | TGTGAAACGAGTCATTTTAG+AGG | - | chr5.4:15220752-15220771 | MS.gene67551:CDS | 35.0% |
!!! | CTTTTTTGAGAGGATAACGA+AGG | - | chr5.4:15218770-15218789 | MS.gene67551:intron | 35.0% |
!!! | GGATTTTTTGTTCTCGAAAG+CGG | - | chr5.4:15217212-15217231 | MS.gene67551:intron | 35.0% |
!!! | TTGCTGGCTTTTAGATGAAT+TGG | - | chr5.4:15216955-15216974 | MS.gene67551:intron | 35.0% |
AAACAGCATTTGTGTAGGAC+AGG | - | chr5.4:15219220-15219239 | MS.gene67551:intron | 40.0% | |
AAATTCGACTTAGGCGGTTT+GGG | - | chr5.4:15216473-15216492 | MS.gene67551:intron | 40.0% | |
AACAGCATTTGTGTAGGACA+GGG | - | chr5.4:15219221-15219240 | MS.gene67551:intron | 40.0% | |
AAGATGTCTGAGCATCATTG+CGG | + | chr5.4:15220697-15220716 | None:intergenic | 40.0% | |
AATACTGAAGGGGAATATGC+TGG | - | chr5.4:15216132-15216151 | MS.gene67551:intron | 40.0% | |
ACAACATTAGAGAGGGAGTT+GGG | - | chr5.4:15216423-15216442 | MS.gene67551:intron | 40.0% | |
ACCATGACATCAAATTGCTC+AGG | + | chr5.4:15218294-15218313 | None:intergenic | 40.0% | |
ACCTTGACATTGTGACATGT+GGG | - | chr5.4:15218015-15218034 | MS.gene67551:intron | 40.0% | |
AGAAAAGAAAGCCAATCCTG+TGG | - | chr5.4:15220656-15220675 | MS.gene67551:CDS | 40.0% | |
AGAATTAGTGCTAACTGCCA+TGG | - | chr5.4:15218508-15218527 | MS.gene67551:intron | 40.0% | |
ATACTTCCTCAGAGGGATAA+AGG | + | chr5.4:15219442-15219461 | None:intergenic | 40.0% | |
ATCTTGAGGGATTGACTACT+AGG | - | chr5.4:15216076-15216095 | MS.gene67551:intron | 40.0% | |
ATGTGGAAATTCGACTTAGG+CGG | - | chr5.4:15216467-15216486 | MS.gene67551:intron | 40.0% | |
ATTCTTGGAATCTTGTCGAG+AGG | - | chr5.4:15218194-15218213 | MS.gene67551:intron | 40.0% | |
CACCTTGTTCAAATACAGCA+TGG | + | chr5.4:15220599-15220618 | None:intergenic | 40.0% | |
CATGGATGAAATGTCTTTGC+AGG | - | chr5.4:15220558-15220577 | MS.gene67551:CDS | 40.0% | |
CATTTATCCGGTGATTTCTG+TGG | + | chr5.4:15218565-15218584 | None:intergenic | 40.0% | |
CCACTGTTGATGTCCTTTAA+AGG | - | chr5.4:15217851-15217870 | MS.gene67551:intron | 40.0% | |
CGAGTTATCTACCATGCAAA+AGG | + | chr5.4:15217039-15217058 | None:intergenic | 40.0% | |
CGGTGATAGAGAATGCTATT+TGG | - | chr5.4:15217232-15217251 | MS.gene67551:intron | 40.0% | |
CTAGCCATTTGCTTATCTCT+GGG | - | chr5.4:15218719-15218738 | MS.gene67551:intron | 40.0% | |
CTCCTTACCAAAGAATCAAC+AGG | + | chr5.4:15216514-15216533 | None:intergenic | 40.0% | |
CTTGATTCCAGGATACTTTG+TGG | + | chr5.4:15218223-15218242 | None:intergenic | 40.0% | |
GAATTAGTGCTAACTGCCAT+GGG | - | chr5.4:15218509-15218528 | MS.gene67551:intron | 40.0% | |
GAATTTCCACATCTTCTCTC+CGG | + | chr5.4:15216459-15216478 | None:intergenic | 40.0% | |
GACCATGCTGTATTTGAACA+AGG | - | chr5.4:15220594-15220613 | MS.gene67551:CDS | 40.0% | |
GCTTGCAGATGGTTTATTCT+TGG | - | chr5.4:15218179-15218198 | MS.gene67551:intron | 40.0% | |
GTGGCTCGTTGAATACTTAT+TGG | + | chr5.4:15219166-15219185 | None:intergenic | 40.0% | |
TAAACCCGTATTGCATTCAC+TGG | - | chr5.4:15217324-15217343 | MS.gene67551:intron | 40.0% | |
TACTGCATCAACAACCTCTT+GGG | + | chr5.4:15220817-15220836 | None:intergenic | 40.0% | |
TAGCCATTTGCTTATCTCTG+GGG | - | chr5.4:15218720-15218739 | MS.gene67551:intron | 40.0% | |
TCATAACGACAGTGACCATA+TGG | + | chr5.4:15219849-15219868 | None:intergenic | 40.0% | |
TCCAATCGTTCAGCAAATAC+AGG | + | chr5.4:15220726-15220745 | None:intergenic | 40.0% | |
TCTAAGTCCTTAGAAACTGG+TGG | - | chr5.4:15217283-15217302 | MS.gene67551:intron | 40.0% | |
TCTGTTGAACTGGCACAATA+TGG | + | chr5.4:15219397-15219416 | None:intergenic | 40.0% | |
TGATTCTTTGGTAAGGAGAG+TGG | - | chr5.4:15216516-15216535 | MS.gene67551:intron | 40.0% | |
TGCTCTCTTTGTAGTTACTG+TGG | - | chr5.4:15218982-15219001 | MS.gene67551:intron | 40.0% | |
TGGGGGCAAAAACATAATGA+AGG | - | chr5.4:15218744-15218763 | MS.gene67551:intron | 40.0% | |
TGTCGTTATGAGATGTGTGA+GGG | - | chr5.4:15219858-15219877 | MS.gene67551:intron | 40.0% | |
TGTCTTTGCAGGTAATGTTG+GGG | - | chr5.4:15220569-15220588 | MS.gene67551:CDS | 40.0% | |
TTACTGCATCAACAACCTCT+TGG | + | chr5.4:15220818-15220837 | None:intergenic | 40.0% | |
TTCCTTACCAACATTTCCTG+CGG | + | chr5.4:15220625-15220644 | None:intergenic | 40.0% | |
TTCGAGAAATTCGAAGTGCA+TGG | - | chr5.4:15215892-15215911 | MS.gene67551:CDS | 40.0% | |
! | ATCGATTCCATCACTTCAGA+TGG | + | chr5.4:15215934-15215953 | None:intergenic | 40.0% |
! | CAAGTTGACGGGATATGATT+AGG | - | chr5.4:15216396-15216415 | MS.gene67551:intron | 40.0% |
! | CCTTTAAAGGACATCAACAG+TGG | + | chr5.4:15217854-15217873 | None:intergenic | 40.0% |
! | GATTTTCTTTTTGTGCAGGG+TGG | + | chr5.4:15219185-15219204 | None:intergenic | 40.0% |
! | GGTTTGTTTGAAAGGTGGAT+TGG | - | chr5.4:15215966-15215985 | MS.gene67551:intron | 40.0% |
! | TCCTGTATTTGCTGAACGAT+TGG | - | chr5.4:15220722-15220741 | MS.gene67551:CDS | 40.0% |
! | TTCTTCGGTGAAATGGATTC+GGG | - | chr5.4:15217178-15217197 | MS.gene67551:intron | 40.0% |
! | TTGAGTCAAATAACGGGGAT+GGG | - | chr5.4:15220364-15220383 | MS.gene67551:CDS | 40.0% |
!! | ATATGCTGGTCTTGAACATG+AGG | - | chr5.4:15216146-15216165 | MS.gene67551:intron | 40.0% |
!! | ATGGTGGAAACTCAAGTTGA+CGG | - | chr5.4:15216384-15216403 | MS.gene67551:intron | 40.0% |
!! | GACCTGTTGATTCTTTGGTA+AGG | - | chr5.4:15216509-15216528 | MS.gene67551:intron | 40.0% |
!! | GAGAAGACCTGTTGATTCTT+TGG | - | chr5.4:15216504-15216523 | MS.gene67551:intron | 40.0% |
AAGTACAGGACAAAGGACCT+TGG | - | chr5.4:15220777-15220796 | MS.gene67551:CDS | 45.0% | |
ACCCACATGTCACAATGTCA+AGG | + | chr5.4:15218019-15218038 | None:intergenic | 45.0% | |
ACTTCTGCCACAGAAATCAC+CGG | - | chr5.4:15218555-15218574 | MS.gene67551:intron | 45.0% | |
AGAGGGTAAGTACAGGACAA+AGG | - | chr5.4:15220770-15220789 | MS.gene67551:CDS | 45.0% | |
AGCCATTTGCTTATCTCTGG+GGG | - | chr5.4:15218721-15218740 | MS.gene67551:intron | 45.0% | |
ATGTGTACTCACTCATTGGC+TGG | - | chr5.4:15216825-15216844 | MS.gene67551:CDS | 45.0% | |
CAACATTAGAGAGGGAGTTG+GGG | - | chr5.4:15216424-15216443 | MS.gene67551:intron | 45.0% | |
CACCTTGACATTGTGACATG+TGG | - | chr5.4:15218014-15218033 | MS.gene67551:intron | 45.0% | |
CAGGTTACCCCCAATCTTTA+TGG | - | chr5.4:15219666-15219685 | MS.gene67551:intron | 45.0% | |
CTATCTCCTTTATCCCTCTG+AGG | - | chr5.4:15219433-15219452 | MS.gene67551:intron | 45.0% | |
CTGTCGTTATGAGATGTGTG+AGG | - | chr5.4:15219857-15219876 | MS.gene67551:intron | 45.0% | |
CTTGAACATGAGGTTGTTCC+CGG | - | chr5.4:15216156-15216175 | MS.gene67551:intron | 45.0% | |
GAAATTCGACTTAGGCGGTT+TGG | - | chr5.4:15216472-15216491 | MS.gene67551:intron | 45.0% | |
GACAACATTAGAGAGGGAGT+TGG | - | chr5.4:15216422-15216441 | MS.gene67551:intron | 45.0% | |
GACGATACATCACACATACG+AGG | - | chr5.4:15216633-15216652 | MS.gene67551:intron | 45.0% | |
GCCTGAGCAATTTGATGTCA+TGG | - | chr5.4:15218290-15218309 | MS.gene67551:CDS | 45.0% | |
GCTAGCCATTTGCTTATCTC+TGG | - | chr5.4:15218718-15218737 | MS.gene67551:intron | 45.0% | |
GCTCTCATTTGATTATGCCG+TGG | - | chr5.4:15219794-15219813 | MS.gene67551:intron | 45.0% | |
GTCGTTATGAGATGTGTGAG+GGG | - | chr5.4:15219859-15219878 | MS.gene67551:intron | 45.0% | |
TCGAATTTCTCGAAGTGCAC+TGG | + | chr5.4:15215886-15215905 | None:intergenic | 45.0% | |
TCGTTATGAGATGTGTGAGG+GGG | - | chr5.4:15219860-15219879 | MS.gene67551:intron | 45.0% | |
TGAGCATCATTGCGGAAGAA+AGG | + | chr5.4:15220689-15220708 | None:intergenic | 45.0% | |
TGATGCCATCACTGTTTCCA+AGG | + | chr5.4:15219247-15219266 | None:intergenic | 45.0% | |
TTCCGCAGGAAATGTTGGTA+AGG | - | chr5.4:15220620-15220639 | MS.gene67551:CDS | 45.0% | |
TTCCTCAACAGGTTGCAGTA+TGG | - | chr5.4:15220086-15220105 | MS.gene67551:intron | 45.0% | |
! | AAGGTGTTTGAGGAGGTTTG+TGG | + | chr5.4:15215707-15215726 | None:intergenic | 45.0% |
! | AGCGATTCCATCTGAAGTGA+TGG | - | chr5.4:15215924-15215943 | MS.gene67551:CDS | 45.0% |
! | AGTTTTCTCGTCAGTCGTTG+AGG | - | chr5.4:15220307-15220326 | MS.gene67551:intron | 45.0% |
! | ATTTGCTTATCTCTGGGGGT+GGG | - | chr5.4:15218725-15218744 | MS.gene67551:intron | 45.0% |
! | GTTGAGTCAAATAACGGGGA+TGG | - | chr5.4:15220363-15220382 | MS.gene67551:CDS | 45.0% |
! | TGGAGATAAGGTGTTTGAGG+AGG | + | chr5.4:15215714-15215733 | None:intergenic | 45.0% |
! | TGTGTACTCACTCATTGGCT+GGG | - | chr5.4:15216826-15216845 | MS.gene67551:CDS | 45.0% |
!! | CTAGACTCAACAGTTCTGAG+TGG | + | chr5.4:15219892-15219911 | None:intergenic | 45.0% |
!! | GCTTAATTTGCAGCTGAGGA+AGG | - | chr5.4:15216017-15216036 | MS.gene67551:intron | 45.0% |
!! | GGGGTAATGGAGTTGTCAAA+TGG | - | chr5.4:15220128-15220147 | MS.gene67551:intron | 45.0% |
!! | GTTCGCTTAATTTGCAGCTG+AGG | - | chr5.4:15216013-15216032 | MS.gene67551:intron | 45.0% |
!! | TGGATTCGGGTTGCAAGTTT+AGG | - | chr5.4:15217191-15217210 | MS.gene67551:intron | 45.0% |
!! | TGGTGGAAACTCAAGTTGAC+GGG | - | chr5.4:15216385-15216404 | MS.gene67551:intron | 45.0% |
!! | ATATAAAAGAATTAAATATA+CGG | + | chr5.4:15218847-15218866 | None:intergenic | 5.0% |
ACAGGACAAAGGACCTTGGA+GGG | - | chr5.4:15220781-15220800 | MS.gene67551:CDS | 50.0% | |
ACCAAGAGAACAGGCAGGAA+GGG | + | chr5.4:15219508-15219527 | None:intergenic | 50.0% | |
ATTTGTGTAGGACAGGGCCT+TGG | - | chr5.4:15219227-15219246 | MS.gene67551:intron | 50.0% | |
CAAATGCCGGAGAGAAGATG+TGG | - | chr5.4:15216450-15216469 | MS.gene67551:intron | 50.0% | |
CACCCCCAGAGATAAGCAAA+TGG | + | chr5.4:15218726-15218745 | None:intergenic | 50.0% | |
CATTACTTGCTCAACAGCGC+CGG | + | chr5.4:15215848-15215867 | None:intergenic | 50.0% | |
CGCAATGTAACCCTAATCCC+CGG | - | chr5.4:15215799-15215818 | MS.gene67551:CDS | 50.0% | |
CGGGGATTAGGGTTACATTG+CGG | + | chr5.4:15215801-15215820 | None:intergenic | 50.0% | |
CTCAACAGGTTGCAGTATGG+AGG | - | chr5.4:15220089-15220108 | MS.gene67551:intron | 50.0% | |
CTCCATACTGCAACCTGTTG+AGG | + | chr5.4:15220091-15220110 | None:intergenic | 50.0% | |
CTTCCACAAATTCAGCCCAC+AGG | + | chr5.4:15220474-15220493 | None:intergenic | 50.0% | |
CTTGAGACTCTCAACGACAC+CGG | + | chr5.4:15216178-15216197 | None:intergenic | 50.0% | |
CTTGTTGCAAATACAGCGGC+AGG | - | chr5.4:15219693-15219712 | MS.gene67551:intron | 50.0% | |
GAACTAACACCACCACCCAT+CGG | + | chr5.4:15215997-15216016 | None:intergenic | 50.0% | |
GAGAACTTACTAGAGGGCAG+AGG | - | chr5.4:15216543-15216562 | MS.gene67551:intron | 50.0% | |
GATTAGGGTTACATTGCGGG+GGG | + | chr5.4:15215797-15215816 | None:intergenic | 50.0% | |
GCTAAGGCCACCAGTTTCTA+AGG | + | chr5.4:15217293-15217312 | None:intergenic | 50.0% | |
GGATTAGGGTTACATTGCGG+GGG | + | chr5.4:15215798-15215817 | None:intergenic | 50.0% | |
GGGATTAGGGTTACATTGCG+GGG | + | chr5.4:15215799-15215818 | None:intergenic | 50.0% | |
GGGGATTAGGGTTACATTGC+GGG | + | chr5.4:15215800-15215819 | None:intergenic | 50.0% | |
GTCCTTTGTGTTGGACCTGT+GGG | - | chr5.4:15220456-15220475 | MS.gene67551:CDS | 50.0% | |
TACAGGACAAAGGACCTTGG+AGG | - | chr5.4:15220780-15220799 | MS.gene67551:CDS | 50.0% | |
TCAAGTGGCACCAAGAGAAC+AGG | + | chr5.4:15219517-15219536 | None:intergenic | 50.0% | |
TGCATCAACAACCTCTTGGG+TGG | + | chr5.4:15220814-15220833 | None:intergenic | 50.0% | |
TTGAGACTCTCAACGACACC+GGG | + | chr5.4:15216177-15216196 | None:intergenic | 50.0% | |
! | CATTTGCTTATCTCTGGGGG+TGG | - | chr5.4:15218724-15218743 | MS.gene67551:intron | 50.0% |
! | CTGTGGGCTGAATTTGTGGA+AGG | - | chr5.4:15220472-15220491 | MS.gene67551:CDS | 50.0% |
! | GAGGTTGCCACAAAGTATCC+TGG | - | chr5.4:15218213-15218232 | MS.gene67551:intron | 50.0% |
! | GCGTGGAGATAAGGTGTTTG+AGG | + | chr5.4:15215717-15215736 | None:intergenic | 50.0% |
! | GTCAAATAACGGGGATGGGT+TGG | - | chr5.4:15220368-15220387 | MS.gene67551:CDS | 50.0% |
! | TTTGAACAAGGTGCTTCCGC+AGG | - | chr5.4:15220606-15220625 | MS.gene67551:CDS | 50.0% |
! | TTTGCTTATCTCTGGGGGTG+GGG | - | chr5.4:15218726-15218745 | MS.gene67551:intron | 50.0% |
!! | AAGGAGAAGTGCCACAGGAT+TGG | + | chr5.4:15220670-15220689 | None:intergenic | 50.0% |
!! | GAAGAAAGGAGAAGTGCCAC+AGG | + | chr5.4:15220675-15220694 | None:intergenic | 50.0% |
ACCCTTCCTGCCTGTTCTCT+TGG | - | chr5.4:15219504-15219523 | MS.gene67551:intron | 55.0% | |
AGCCCACAGGTCCAACACAA+AGG | + | chr5.4:15220461-15220480 | None:intergenic | 55.0% | |
AGGCAACAGCAGCTGTTGTG+GGG | - | chr5.4:15220109-15220128 | MS.gene67551:intron | 55.0% | |
CACCAAGAGAACAGGCAGGA+AGG | + | chr5.4:15219509-15219528 | None:intergenic | 55.0% | |
CAGCAGCTGTTGTGGGGTAA+TGG | - | chr5.4:15220115-15220134 | MS.gene67551:intron | 55.0% | |
CAGGGCCTTGGAAACAGTGA+TGG | - | chr5.4:15219239-15219258 | MS.gene67551:intron | 55.0% | |
CGGCGCTGTTGAGCAAGTAA+TGG | - | chr5.4:15215846-15215865 | MS.gene67551:CDS | 55.0% | |
GAGGCAACAGCAGCTGTTGT+GGG | - | chr5.4:15220108-15220127 | MS.gene67551:intron | 55.0% | |
GCATGTAGGTTACGGTACGG+GGG | + | chr5.4:15215756-15215775 | None:intergenic | 55.0% | |
GGAGTTGGGGTAGCAAATGC+CGG | - | chr5.4:15216437-15216456 | MS.gene67551:intron | 55.0% | |
GGCATGTAGGTTACGGTACG+GGG | + | chr5.4:15215757-15215776 | None:intergenic | 55.0% | |
GGGCAGTTGGTCCTTTGTGT+TGG | - | chr5.4:15220447-15220466 | MS.gene67551:CDS | 55.0% | |
GGGCATGTAGGTTACGGTAC+GGG | + | chr5.4:15215758-15215777 | None:intergenic | 55.0% | |
GGGGCATGTAGGTTACGGTA+CGG | + | chr5.4:15215759-15215778 | None:intergenic | 55.0% | |
GGTCCTTTGTGTTGGACCTG+TGG | - | chr5.4:15220455-15220474 | MS.gene67551:CDS | 55.0% | |
GGTGCTTCCGCAGGAAATGT+TGG | - | chr5.4:15220615-15220634 | MS.gene67551:CDS | 55.0% | |
TTACTAGAGGGCAGAGGCAG+AGG | - | chr5.4:15216549-15216568 | MS.gene67551:intron | 55.0% | |
! | AATACAGCGGCAGGCATTGC+TGG | - | chr5.4:15219702-15219721 | MS.gene67551:intron | 55.0% |
! | GGACCTGTGGGCTGAATTTG+TGG | - | chr5.4:15220468-15220487 | MS.gene67551:CDS | 55.0% |
! | TTGCTTATCTCTGGGGGTGG+GGG | - | chr5.4:15218727-15218746 | MS.gene67551:intron | 55.0% |
!! | CGGCAGTGCTGTTTGTAGGA+TGG | - | chr5.4:15220401-15220420 | MS.gene67551:CDS | 55.0% |
!! | CGGTGTCGTTGAGAGTCTCA+AGG | - | chr5.4:15216176-15216195 | MS.gene67551:intron | 55.0% |
AGGGACAAGCACCACCCAAG+AGG | - | chr5.4:15220800-15220819 | MS.gene67551:CDS | 60.0% | |
CTAATCCCCGGCGACGGAAT+CGG | - | chr5.4:15215811-15215830 | MS.gene67551:CDS | 60.0% | |
GATTCCGTCGCCGGGGATTA+GGG | + | chr5.4:15215812-15215831 | None:intergenic | 60.0% | |
GGAATCGGCCCTCTCGTAAC+CGG | - | chr5.4:15215826-15215845 | MS.gene67551:CDS | 60.0% | |
GGAGGCAACAGCAGCTGTTG+TGG | - | chr5.4:15220107-15220126 | MS.gene67551:intron | 60.0% | |
GTAACCCTAATCCCCGGCGA+CGG | - | chr5.4:15215805-15215824 | MS.gene67551:CDS | 60.0% | |
GTAGGTTACGGTACGGGGGT+GGG | + | chr5.4:15215752-15215771 | None:intergenic | 60.0% | |
GTGGCACCAAGAGAACAGGC+AGG | + | chr5.4:15219513-15219532 | None:intergenic | 60.0% | |
TGTAGGTTACGGTACGGGGG+TGG | + | chr5.4:15215753-15215772 | None:intergenic | 60.0% | |
!! | AACGGGGATGGGTTGGAGTC+TGG | - | chr5.4:15220375-15220394 | MS.gene67551:CDS | 60.0% |
!! | AGGTGGATTGGCGACTCCGA+TGG | - | chr5.4:15215978-15215997 | MS.gene67551:intron | 60.0% |
!! | CAACAGCGCCGGTTACGAGA+GGG | + | chr5.4:15215837-15215856 | None:intergenic | 60.0% |
!! | GATGGGTTGGAGTCTGGTGG+CGG | - | chr5.4:15220381-15220400 | MS.gene67551:CDS | 60.0% |
!! | GGTGGATTGGCGACTCCGAT+GGG | - | chr5.4:15215979-15215998 | MS.gene67551:intron | 60.0% |
!! | GTGGCGGCAGTGCTGTTTGT+AGG | - | chr5.4:15220397-15220416 | MS.gene67551:CDS | 60.0% |
!! | TCAACAGCGCCGGTTACGAG+AGG | + | chr5.4:15215838-15215857 | None:intergenic | 60.0% |
!! | TGGAGGCACTGGTGTCATGC+CGG | - | chr5.4:15219722-15219741 | MS.gene67551:intron | 60.0% |
ATTGCGGGGGGTTCCGTCTC+CGG | + | chr5.4:15215785-15215804 | None:intergenic | 65.0% | |
CGATTCCGTCGCCGGGGATT+AGG | + | chr5.4:15215813-15215832 | None:intergenic | 65.0% | |
GGGGCGGGGCATGTAGGTTA+CGG | + | chr5.4:15215764-15215783 | None:intergenic | 65.0% | |
GGGTGGTGCTTGTCCCTCCA+AGG | + | chr5.4:15220797-15220816 | None:intergenic | 65.0% | |
GTAACCTACATGCCCCGCCC+CGG | - | chr5.4:15215763-15215782 | MS.gene67551:CDS | 65.0% | |
TTACGGTACGGGGGTGGGTG+AGG | + | chr5.4:15215747-15215766 | None:intergenic | 65.0% | |
TTGGCGACTCCGATGGGTGG+TGG | - | chr5.4:15215985-15216004 | MS.gene67551:intron | 65.0% | |
! | ACAGCGGCAGGCATTGCTGG+AGG | - | chr5.4:15219705-15219724 | MS.gene67551:intron | 65.0% |
! | GCAGGCATTGCTGGAGGCAC+TGG | - | chr5.4:15219711-15219730 | MS.gene67551:intron | 65.0% |
! | GGATTGGCGACTCCGATGGG+TGG | - | chr5.4:15215982-15216001 | MS.gene67551:intron | 65.0% |
! | GGTGGTGGCGCGTGGAGATA+AGG | + | chr5.4:15215726-15215745 | None:intergenic | 65.0% |
!! | GGAGGCACTGGTGTCATGCC+GGG | - | chr5.4:15219723-15219742 | MS.gene67551:intron | 65.0% |
!! | GGGGATGGGTTGGAGTCTGG+TGG | - | chr5.4:15220378-15220397 | MS.gene67551:CDS | 65.0% |
TACATGCCCCGCCCCGGAGA+CGG | - | chr5.4:15215769-15215788 | MS.gene67551:CDS | 70.0% | |
TACGGGGGTGGGTGAGGTGG+TGG | + | chr5.4:15215741-15215760 | None:intergenic | 70.0% | |
TTGCGGGGGGTTCCGTCTCC+GGG | + | chr5.4:15215784-15215803 | None:intergenic | 70.0% | |
! | AGAGGGCCGATTCCGTCGCC+GGG | + | chr5.4:15215820-15215839 | None:intergenic | 70.0% |
! | GAGAGGGCCGATTCCGTCGC+CGG | + | chr5.4:15215821-15215840 | None:intergenic | 70.0% |
!! | GGCACTGGTGTCATGCCGGG+AGG | - | chr5.4:15219726-15219745 | MS.gene67551:intron | 70.0% |
CGGTACGGGGGTGGGTGAGG+TGG | + | chr5.4:15215744-15215763 | None:intergenic | 75.0% | |
GTCTCCGGGGCGGGGCATGT+AGG | + | chr5.4:15215770-15215789 | None:intergenic | 75.0% | |
TGCGGGGGGTTCCGTCTCCG+GGG | + | chr5.4:15215783-15215802 | None:intergenic | 75.0% | |
! | GAGGGCCGATTCCGTCGCCG+GGG | + | chr5.4:15215819-15215838 | None:intergenic | 75.0% |
! | GTGGGTGAGGTGGTGGCGCG+TGG | + | chr5.4:15215734-15215753 | None:intergenic | 75.0% |
! | GGGGGGTTCCGTCTCCGGGG+CGG | + | chr5.4:15215780-15215799 | None:intergenic | 80.0% |
! | GGGGGTTCCGTCTCCGGGGC+GGG | + | chr5.4:15215779-15215798 | None:intergenic | 80.0% |
! | GGGGTTCCGTCTCCGGGGCG+GGG | + | chr5.4:15215778-15215797 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 15215688 | 15220854 | 15215688 | ID=MS.gene67551 |
chr5.4 | mRNA | 15215688 | 15220854 | 15215688 | ID=MS.gene67551.t1;Parent=MS.gene67551 |
chr5.4 | exon | 15220345 | 15220854 | 15220345 | ID=MS.gene67551.t1.exon1;Parent=MS.gene67551.t1 |
chr5.4 | CDS | 15220345 | 15220854 | 15220345 | ID=cds.MS.gene67551.t1;Parent=MS.gene67551.t1 |
chr5.4 | exon | 15218231 | 15218470 | 15218231 | ID=MS.gene67551.t1.exon2;Parent=MS.gene67551.t1 |
chr5.4 | CDS | 15218231 | 15218470 | 15218231 | ID=cds.MS.gene67551.t1;Parent=MS.gene67551.t1 |
chr5.4 | exon | 15216795 | 15216873 | 15216795 | ID=MS.gene67551.t1.exon3;Parent=MS.gene67551.t1 |
chr5.4 | CDS | 15216795 | 15216873 | 15216795 | ID=cds.MS.gene67551.t1;Parent=MS.gene67551.t1 |
chr5.4 | exon | 15215688 | 15215962 | 15215688 | ID=MS.gene67551.t1.exon4;Parent=MS.gene67551.t1 |
chr5.4 | CDS | 15215688 | 15215962 | 15215688 | ID=cds.MS.gene67551.t1;Parent=MS.gene67551.t1 |
Gene Sequence |
Protein sequence |