AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23789


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23789.t1 MTR_8g074030 100.000 371 0 0 1 371 1 371 0.0 764
MS.gene23789.t1 MTR_8g074030 98.922 371 0 1 1 371 1 367 0.0 751
MS.gene23789.t1 MTR_5g023740 88.949 371 37 1 1 371 1 367 0.0 676
MS.gene23789.t1 MTR_5g023740 87.871 371 37 2 1 371 1 363 0.0 663
MS.gene23789.t1 MTR_5g023740 89.680 281 25 1 1 281 1 277 0.0 518
MS.gene23789.t1 MTR_5g023740 89.680 281 25 1 1 281 1 277 0.0 518
MS.gene23789.t1 MTR_5g023740 88.256 281 25 2 1 281 1 273 0.0 505
MS.gene23789.t1 MTR_1g064070 51.744 344 156 4 34 370 18 358 1.56e-118 348
MS.gene23789.t1 MTR_3g101470 51.786 336 154 3 40 370 21 353 7.16e-118 346
MS.gene23789.t1 MTR_2g104610 29.333 375 209 18 17 353 18 374 7.02e-27 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23789.t1 AT4G35260 85.095 369 52 1 3 371 2 367 0.0 643
MS.gene23789.t1 AT2G17130 82.927 369 60 1 3 371 2 367 0.0 627
MS.gene23789.t1 AT4G35650 81.250 368 67 1 4 371 3 368 0.0 624
MS.gene23789.t1 AT2G17130 81.843 369 60 2 3 371 2 363 0.0 614
MS.gene23789.t1 AT5G03290 50.595 336 158 2 40 370 42 374 2.01e-116 343
MS.gene23789.t1 AT3G09810 49.107 336 163 2 40 370 42 374 8.77e-111 328
MS.gene23789.t1 AT1G32480 62.946 224 68 5 41 261 2 213 6.07e-93 277
MS.gene23789.t1 AT1G80560 29.076 368 207 15 44 371 45 398 1.14e-29 118
MS.gene23789.t1 AT5G14200 28.986 345 197 14 44 353 49 380 5.93e-29 116
MS.gene23789.t1 AT5G14200 28.986 345 197 14 44 353 49 380 6.35e-29 116
MS.gene23789.t1 AT1G31180 28.406 345 199 14 44 353 46 377 1.58e-27 112
MS.gene23789.t1 AT1G31180 28.406 345 199 14 44 353 61 392 2.79e-27 112
MS.gene23789.t1 AT5G14200 26.891 238 137 9 44 250 49 280 2.95e-11 64.3

Find 108 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATCCCGTCGCCGGGAATT+AGG 0.140896 8.4:+30592221 None:intergenic
AAGAATAAGGTTTGTCTTAA+AGG 0.160532 8.4:-30592073 MS.gene23789:CDS
ACGTTGATATTGTAGTTATT+AGG 0.239338 8.4:-30591925 MS.gene23789:CDS
CTAGATTTCCATACAGATTT+GGG 0.243372 8.4:+30589100 None:intergenic
ACTAGATTTCCATACAGATT+TGG 0.273061 8.4:+30589099 None:intergenic
CGTTGATATTGTAGTTATTA+GGG 0.273382 8.4:-30591924 MS.gene23789:CDS
TGAATCGATCCGTAAGAATA+AGG 0.290840 8.4:-30592086 MS.gene23789:CDS
TCACTTGCTTTCTGTTGTTC+AGG 0.298640 8.4:+30590499 None:intergenic
GGGAATTAGGGTTACGGGAC+GGG 0.328866 8.4:+30592234 None:intergenic
GGAATTAGGGTTACGGGACG+GGG 0.332478 8.4:+30592235 None:intergenic
ATTTCGTTGTATTTAATTCC+AGG 0.346017 8.4:+30590396 None:intergenic
TTACTGCATCGACAACTTCT+TGG 0.351267 8.4:+30587464 None:intergenic
CTTGAACATGAGGTTGTTCC+CGG 0.354977 8.4:-30591875 MS.gene23789:CDS
AATACTGCGGCAGGCATTGC+TGG 0.359026 8.4:-30589072 MS.gene23789:CDS
GCTTCATTATATTTGCTTTG+TGG 0.364344 8.4:+30590469 None:intergenic
AGGTGGATTGGTTACTCCTA+TGG 0.365893 8.4:-30592053 MS.gene23789:CDS
GATCCCGTCGCCGGGAATTA+GGG 0.383912 8.4:+30592222 None:intergenic
GGTCAGCAAATGCAGGAAAC+TGG 0.384422 8.4:+30587563 None:intergenic
TCCTGCATTTGCTGACCGTT+TGG 0.391960 8.4:-30587557 MS.gene23789:CDS
CTTTGAGATGGTGAATGGTT+CGG 0.393371 8.4:+30592297 None:intergenic
TCGAATTTCTCAAAGTAAAC+TGG 0.397465 8.4:+30592148 None:intergenic
GCTTGCGGATGGTTTGTTCT+TGG 0.398902 8.4:-30590448 MS.gene23789:CDS
TGAGAGAAGGTGTTTGAGGA+GGG 0.401136 8.4:+30592333 None:intergenic
GAATGGTTCGGATTGGGATC+GGG 0.408930 8.4:+30592309 None:intergenic
TACTGCATCGACAACTTCTT+GGG 0.411456 8.4:+30587465 None:intergenic
GCAGGCATTGCTGGAGGCAC+TGG 0.419145 8.4:-30589063 MS.gene23789:CDS
TAAGACAAACCTTATTCTTA+CGG 0.426710 8.4:+30592077 None:intergenic
GTATTTAATTCCAGGATACT+TGG 0.429599 8.4:+30590404 None:intergenic
TGAATGGTTCGGATTGGGAT+CGG 0.435193 8.4:+30592308 None:intergenic
GAATTAGGGTTACGGGACGG+GGG 0.435371 8.4:+30592236 None:intergenic
TCGCCGGGAATTAGGGTTAC+GGG 0.436127 8.4:+30592229 None:intergenic
CGGTGTCGTCGAAAGTCTTA+AGG 0.445057 8.4:-30591855 MS.gene23789:intron
GGGTTGAGAGAAGGTGTTTG+AGG 0.447768 8.4:+30592329 None:intergenic
ATGGATCTTCTTGTTGCCAT+TGG 0.453390 8.4:+30592358 None:intergenic
CGGCGCCGTTGAGCAACTAA+TGG 0.458955 8.4:-30592185 MS.gene23789:CDS
TTTGAGCAGGGTGCTTCAGC+AGG 0.462492 8.4:-30587673 MS.gene23789:CDS
AAGGTGTTTGAGGAGGGGTA+TGG 0.464794 8.4:+30592339 None:intergenic
GAGTGGTCCGATCCCGTCGC+CGG 0.471824 8.4:+30592213 None:intergenic
GGGATCGGACCACTCGTAAC+CGG 0.473370 8.4:-30592205 MS.gene23789:CDS
GATGGTGAATGGTTCGGATT+GGG 0.474079 8.4:+30592303 None:intergenic
TGAGCATGCTGTGTTTGAGC+AGG 0.476481 8.4:-30587686 MS.gene23789:CDS
TTAAGACTTTCGACGACACC+GGG 0.476912 8.4:+30591857 None:intergenic
TCTCATCAGCTATGATGCTT+AGG 0.477441 8.4:-30587591 MS.gene23789:CDS
GAGGTTGCCACCAAGTATCC+TGG 0.478525 8.4:-30590414 MS.gene23789:CDS
CATCGCTTTGAGATGGTGAA+TGG 0.478723 8.4:+30592292 None:intergenic
CTAGTTGCAAATACTGCGGC+AGG 0.479098 8.4:-30589081 MS.gene23789:CDS
AGATGGTGAATGGTTCGGAT+TGG 0.479659 8.4:+30592302 None:intergenic
GGAGGCACTGGAGTCATGCC+AGG 0.483629 8.4:-30589051 MS.gene23789:CDS
AATAAGGTTTGTCTTAAAGG+TGG 0.484570 8.4:-30592070 MS.gene23789:CDS
GTCGCCGGGAATTAGGGTTA+CGG 0.486006 8.4:+30592228 None:intergenic
TTGAGAGAAGGTGTTTGAGG+AGG 0.488120 8.4:+30592332 None:intergenic
GGTTTGTCTTAAAGGTGGAT+TGG 0.488656 8.4:-30592065 MS.gene23789:CDS
AATTAGGGTTACGGGACGGG+GGG 0.490635 8.4:+30592237 None:intergenic
GATGAGAGAAGAAGCGCCAC+TGG 0.491289 8.4:+30587607 None:intergenic
CTTAAGACTTTCGACGACAC+CGG 0.493025 8.4:+30591856 None:intergenic
TCCAAACGGTCAGCAAATGC+AGG 0.494673 8.4:+30587556 None:intergenic
CATTAGTTGCTCAACGGCGC+CGG 0.494753 8.4:+30592186 None:intergenic
TTTGAGAAATTCGACGTACA+TGG 0.504755 8.4:-30592139 MS.gene23789:CDS
TAACCCTAATTCCCGGCGAC+GGG 0.510103 8.4:-30592225 MS.gene23789:CDS
GCCCGAGCAGTTTGATGTCA+TGG 0.512416 8.4:-30590337 MS.gene23789:intron
TACCATGACATCAAACTGCT+CGG 0.517965 8.4:+30590335 None:intergenic
TAAATACAACGAAATTATTG+TGG 0.523864 8.4:-30590388 MS.gene23789:CDS
TTGGTTACTCCTATGGGTGG+TGG 0.528515 8.4:-30592046 MS.gene23789:CDS
GGTGGATTGGTTACTCCTAT+GGG 0.530483 8.4:-30592052 MS.gene23789:CDS
AGTGGTCCGATCCCGTCGCC+GGG 0.532047 8.4:+30592214 None:intergenic
TAGGTTACCCCAAATCTGTA+TGG 0.533364 8.4:-30589108 MS.gene23789:CDS
CGCTTCCATTAGTTGCTCAA+CGG 0.535249 8.4:+30592180 None:intergenic
CTAATTCCCGGCGACGGGAT+CGG 0.538156 8.4:-30592220 MS.gene23789:CDS
TACATGCACCGTCCCGGCGA+CGG 0.545739 8.4:-30592262 MS.gene23789:CDS
CGTCCCGTAACCCTAATTCC+CGG 0.547258 8.4:-30592232 MS.gene23789:CDS
CGGGAATTAGGGTTACGGGA+CGG 0.553127 8.4:+30592233 None:intergenic
AATACTGAAGGGGAGTATGC+TGG 0.554823 8.4:-30591899 MS.gene23789:CDS
GGTGCTTCAGCAGGAAATGT+TGG 0.556712 8.4:-30587664 MS.gene23789:CDS
AGCAAATATAATGAAGCTTG+CGG 0.556973 8.4:-30590463 MS.gene23789:CDS
AAGTATCGGACAAAGGATCT+TGG 0.558261 8.4:-30587502 MS.gene23789:CDS
TTTAATTCCAGGATACTTGG+TGG 0.560631 8.4:+30590407 None:intergenic
GTTATTAGGGAGAATACTGA+AGG 0.561297 8.4:-30591911 MS.gene23789:CDS
ACCATGACATCAAACTGCTC+GGG 0.568329 8.4:+30590336 None:intergenic
GAGAGAAGGTGTTTGAGGAG+GGG 0.568586 8.4:+30592334 None:intergenic
GTAACCCTAATTCCCGGCGA+CGG 0.576168 8.4:-30592226 MS.gene23789:CDS
GAGCATGCTGTGTTTGAGCA+GGG 0.577817 8.4:-30587685 MS.gene23789:CDS
TTATTAGGGAGAATACTGAA+GGG 0.584736 8.4:-30591910 MS.gene23789:CDS
GTAACCTACATGCACCGTCC+CGG 0.585438 8.4:-30592268 MS.gene23789:CDS
GTTCTTGGAATCTTGTCGAG+AGG 0.585888 8.4:-30590433 MS.gene23789:CDS
TGCATCGACAACTTCTTGGG+TGG 0.586969 8.4:+30587468 None:intergenic
ATTGGGATCGGGTTGAGAGA+AGG 0.590008 8.4:+30592320 None:intergenic
AATATAATGAAGCTTGCGGA+TGG 0.592033 8.4:-30590459 MS.gene23789:CDS
GGTTACGCATCGCTTTGAGA+TGG 0.594581 8.4:+30592285 None:intergenic
TATCGGACAAAGGATCTTGG+AGG 0.597549 8.4:-30587499 MS.gene23789:CDS
TCATTCTAGAGGGCAAGTAT+CGG 0.606553 8.4:-30587516 MS.gene23789:CDS
GTTCGCTTAATGTTCAGTTG+AGG 0.618363 8.4:-30592018 MS.gene23789:CDS
TCATGTCGTGTAGGTAACCC+AGG 0.619385 8.4:+30591950 None:intergenic
TATTAGGGAGAATACTGAAG+GGG 0.622910 8.4:-30591909 MS.gene23789:CDS
TCAACGGCGCCGGTTACGAG+TGG 0.629526 8.4:+30592196 None:intergenic
TCAACGTTATCATGTCGTGT+AGG 0.630854 8.4:+30591941 None:intergenic
TAGATTTCCATACAGATTTG+GGG 0.633748 8.4:+30589101 None:intergenic
GAACTAACACCACCACCCAT+AGG 0.634743 8.4:+30592037 None:intergenic
GTATGCTGGTCTTGAACATG+AGG 0.635401 8.4:-30591885 MS.gene23789:CDS
GTCGCCGGGACGGTGCATGT+AGG 0.635610 8.4:+30592264 None:intergenic
ATCGGACAAAGGATCTTGGA+GGG 0.644506 8.4:-30587498 MS.gene23789:CDS
GGATTGGTTACTCCTATGGG+TGG 0.645378 8.4:-30592049 MS.gene23789:CDS
TGACATGAAAGCTGTACCTA+CGG 0.647259 8.4:-30592116 MS.gene23789:CDS
ACTGCGGCAGGCATTGCTGG+AGG 0.647366 8.4:-30589069 MS.gene23789:CDS
AGAGGGCAAGTATCGGACAA+AGG 0.667139 8.4:-30587509 MS.gene23789:CDS
ACAAAAGACAGCTAATCCAG+TGG 0.690265 8.4:-30587623 MS.gene23789:CDS
GGCACTGGAGTCATGCCAGG+AGG 0.693153 8.4:-30589048 MS.gene23789:intron
ATCGATTCAAGAACTTCCGT+AGG 0.726256 8.4:+30592100 None:intergenic
AAATCTAGTTGCAAATACTG+CGG 0.735896 8.4:-30589085 MS.gene23789:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATAAATATTTGAAAAATA+AGG - chr8.4:30589094-30589113 MS.gene23789:CDS 10.0%
!! ATTACAAAAATGACTATAAT+TGG + chr8.4:30588345-30588364 None:intergenic 15.0%
!! CTGTAAAATAAAATTTAAAC+AGG + chr8.4:30591563-30591582 None:intergenic 15.0%
!! TAAAGACATTAATATGAAAT+AGG + chr8.4:30591288-30591307 None:intergenic 15.0%
!!! GTCATTTTTGTAATAATTTT+AGG - chr8.4:30588351-30588370 MS.gene23789:intron 15.0%
!!! TAGTTTATTTCTTAATTTTG+TGG - chr8.4:30588441-30588460 MS.gene23789:intron 15.0%
!!! TGTTTGTATAATTTTTTTTG+AGG - chr8.4:30591497-30591516 MS.gene23789:intron 15.0%
!!! TTGAATTTTTTGAATTGTTT+GGG + chr8.4:30591169-30591188 None:intergenic 15.0%
!! AACATTCTCACAAATTATAT+AGG - chr8.4:30589130-30589149 MS.gene23789:intron 20.0%
!! AGGTTAATGTTTAAAAACTT+TGG + chr8.4:30590417-30590436 None:intergenic 20.0%
!! AGTGAATTTATAAAGTTAAG+TGG + chr8.4:30590368-30590387 None:intergenic 20.0%
!! CAAACAATTCAAAAAATTCA+AGG - chr8.4:30591168-30591187 MS.gene23789:intron 20.0%
!! CATCATAGATTAAAGAAAAA+TGG + chr8.4:30589505-30589524 None:intergenic 20.0%
!! CTGTTAGACTAATTAAATAT+AGG + chr8.4:30591325-30591344 None:intergenic 20.0%
!! TAAATACAACGAAATTATTG+TGG - chr8.4:30589414-30589433 MS.gene23789:intron 20.0%
!! TAGACTAATTAAATATAGGT+TGG + chr8.4:30591321-30591340 None:intergenic 20.0%
!! TATGTGAAATATGAATATGA+TGG - chr8.4:30591929-30591948 MS.gene23789:CDS 20.0%
!! TCTAATATTTCTTAATTTCC+AGG + chr8.4:30589886-30589905 None:intergenic 20.0%
!! TGAAATTTCATAAATGTGTA+GGG - chr8.4:30588416-30588435 MS.gene23789:intron 20.0%
!! TTGAAATTTCATAAATGTGT+AGG - chr8.4:30588415-30588434 MS.gene23789:intron 20.0%
!! TTTAAACAGGTTATCATATT+AGG + chr8.4:30591550-30591569 None:intergenic 20.0%
!!! AATTTTGTGGTTTCTTAAAA+AGG - chr8.4:30588454-30588473 MS.gene23789:intron 20.0%
!!! CAAAAAAAAAGTACTGAATT+TGG + chr8.4:30589020-30589039 None:intergenic 20.0%
!!! CATTTTTCTTTAATCTATGA+TGG - chr8.4:30589503-30589522 MS.gene23789:intron 20.0%
!!! CTCAATTTTATAAATGTTTC+TGG + chr8.4:30589941-30589960 None:intergenic 20.0%
!!! CTTGAATTTTTTGAATTGTT+TGG + chr8.4:30591170-30591189 None:intergenic 20.0%
!!! GTAGGATTTTGAATATTTTA+AGG - chr8.4:30588379-30588398 MS.gene23789:intron 20.0%
!!! TAATAATTTTAGGTTTGAGT+AGG - chr8.4:30588361-30588380 MS.gene23789:intron 20.0%
!!! TTAATTGTTTTAATCTTCCT+GGG - chr8.4:30587835-30587854 MS.gene23789:intron 20.0%
! AACATTATGGATTCTCTATT+AGG + chr8.4:30588293-30588312 None:intergenic 25.0%
! AAGAATAAGGTTTGTCTTAA+AGG - chr8.4:30587729-30587748 MS.gene23789:intron 25.0%
! AATAAAATGTCTGATTGTCT+TGG - chr8.4:30591831-30591850 MS.gene23789:intron 25.0%
! AATATGCCAAAAATTTGTGA+AGG - chr8.4:30591594-30591613 MS.gene23789:intron 25.0%
! AATCTAGATAGATATTCCAA+AGG + chr8.4:30589163-30589182 None:intergenic 25.0%
! ACAAACAGTTCATGAAAAAA+CGG + chr8.4:30589642-30589661 None:intergenic 25.0%
! ACGTTGATATTGTAGTTATT+AGG - chr8.4:30587877-30587896 MS.gene23789:intron 25.0%
! ACTCTTTATAAACTCATTTC+AGG + chr8.4:30588215-30588234 None:intergenic 25.0%
! AGTAGTGTATTTAGGTAAAT+AGG + chr8.4:30591787-30591806 None:intergenic 25.0%
! ATAAAATGTCTGATTGTCTT+GGG - chr8.4:30591832-30591851 MS.gene23789:intron 25.0%
! ATTTAAGGGTAGAAATATGT+CGG + chr8.4:30591894-30591913 None:intergenic 25.0%
! ATTTCGTTGTATTTAATTCC+AGG + chr8.4:30589409-30589428 None:intergenic 25.0%
! CAATCAATAACCTAGTTTAT+TGG + chr8.4:30588623-30588642 None:intergenic 25.0%
! CGTTGATATTGTAGTTATTA+GGG - chr8.4:30587878-30587897 MS.gene23789:intron 25.0%
! GAAAATAGATGTATTACAGA+AGG - chr8.4:30588642-30588661 MS.gene23789:intron 25.0%
! GAACTTAAATTAACCTTGAA+TGG - chr8.4:30588749-30588768 MS.gene23789:intron 25.0%
! TAAGACAAACCTTATTCTTA+CGG + chr8.4:30587728-30587747 None:intergenic 25.0%
! TACATAAGTATGTCCTAAAA+TGG + chr8.4:30589077-30589096 None:intergenic 25.0%
! TAGACTAAACAATTTATACC+AGG + chr8.4:30591257-30591276 None:intergenic 25.0%
! TCATTAACTACATTAACATC+TGG - chr8.4:30591029-30591048 MS.gene23789:intron 25.0%
! TGAAAAACCAATAGCAAAAA+AGG + chr8.4:30589795-30589814 None:intergenic 25.0%
! TGATTGAGATTTGAGAATAT+CGG - chr8.4:30588162-30588181 MS.gene23789:intron 25.0%
!! ACAACTTCAATTTAAAACCT+TGG - chr8.4:30588915-30588934 MS.gene23789:intron 25.0%
!! GAATAATGTTCTAAACTTGA+TGG - chr8.4:30590880-30590899 MS.gene23789:intron 25.0%
!! TTATATAGGTTCTTTTCCTT+TGG - chr8.4:30589144-30589163 MS.gene23789:intron 25.0%
!! TTTATACCAGGTTTTCAAAA+AGG + chr8.4:30591245-30591264 None:intergenic 25.0%
!! TTTTAATCCAAATATTACCC+TGG + chr8.4:30588984-30589003 None:intergenic 25.0%
!!! ATTTTTTTTGAGGTCTTTCA+TGG - chr8.4:30591507-30591526 MS.gene23789:intron 25.0%
!!! GTTAATTGTTTTAATCTTCC+TGG - chr8.4:30587834-30587853 MS.gene23789:intron 25.0%
!!! TCTTTGTTTTATATTGATCG+AGG - chr8.4:30587986-30588005 MS.gene23789:intron 25.0%
!!! TTTGACTTGATATTTTTGGT+AGG - chr8.4:30589225-30589244 MS.gene23789:intron 25.0%
AAAGGTTTGTGATTGCAATA+TGG - chr8.4:30588472-30588491 MS.gene23789:intron 30.0%
AAATCTAGTTGCAAATACTG+CGG - chr8.4:30590717-30590736 MS.gene23789:intron 30.0%
AAGGTTTGTGATTGCAATAT+GGG - chr8.4:30588473-30588492 MS.gene23789:intron 30.0%
AATAAGGTTTGTCTTAAAGG+TGG - chr8.4:30587732-30587751 MS.gene23789:intron 30.0%
AATCTTGTAGCCAATAAACT+AGG - chr8.4:30588610-30588629 MS.gene23789:intron 30.0%
AATGGTTACAATTGCATATG+TGG + chr8.4:30588829-30588848 None:intergenic 30.0%
AATTTGTGAAGGTAGTAGTA+TGG - chr8.4:30591605-30591624 MS.gene23789:intron 30.0%
ACTAGATTTCCATACAGATT+TGG + chr8.4:30590706-30590725 None:intergenic 30.0%
AGCAAATATAATGAAGCTTG+CGG - chr8.4:30589339-30589358 MS.gene23789:intron 30.0%
ATAATCAGATCAAAGCTCTA+AGG + chr8.4:30590809-30590828 None:intergenic 30.0%
ATAGAGAGTAGAAAAGATTC+AGG + chr8.4:30590058-30590077 None:intergenic 30.0%
ATCTACACATGAATGAACAA+GGG + chr8.4:30590202-30590221 None:intergenic 30.0%
ATGCCACAACAACAAAATTT+AGG + chr8.4:30591755-30591774 None:intergenic 30.0%
ATTAGTGAAATGTGTGCAAA+TGG - chr8.4:30591142-30591161 MS.gene23789:intron 30.0%
CAATGTTGAATACTTAACCA+AGG + chr8.4:30588935-30588954 None:intergenic 30.0%
CTAACAGACTAATATGCAAT+GGG - chr8.4:30591338-30591357 MS.gene23789:intron 30.0%
CTAACTCATCCTTACAAAAT+CGG + chr8.4:30588256-30588275 None:intergenic 30.0%
CTAGATTTCCATACAGATTT+GGG + chr8.4:30590705-30590724 None:intergenic 30.0%
CTTGGTTAAGTATTCAACAT+TGG - chr8.4:30588933-30588952 MS.gene23789:intron 30.0%
GCATCTGATAATTGTTAACA+TGG - chr8.4:30589984-30590003 MS.gene23789:intron 30.0%
GCTTCATTATATTTGCTTTG+TGG + chr8.4:30589336-30589355 None:intergenic 30.0%
GTACTTTGTGGAATATTGAA+GGG - chr8.4:30590494-30590513 MS.gene23789:CDS 30.0%
GTATTTAATTCCAGGATACT+TGG + chr8.4:30589401-30589420 None:intergenic 30.0%
GTGAAATATGAATATGATGG+TGG - chr8.4:30591932-30591951 MS.gene23789:CDS 30.0%
GTTGAAAAAGTCATTCTAGA+GGG - chr8.4:30592276-30592295 MS.gene23789:CDS 30.0%
TAAACAAGGTTTGAATGTCT+AGG - chr8.4:30590158-30590177 MS.gene23789:intron 30.0%
TAACAATTATCAGATGCTGT+TGG + chr8.4:30589981-30590000 None:intergenic 30.0%
TAACTAAAAACTATACCTCC+TGG + chr8.4:30590772-30590791 None:intergenic 30.0%
TACATCCTAAGATACGTTAA+AGG + chr8.4:30590271-30590290 None:intergenic 30.0%
TACGTGTCTAAAGAACATTA+TGG + chr8.4:30588306-30588325 None:intergenic 30.0%
TAGAGAGTAGAAAAGATTCA+GGG + chr8.4:30590057-30590076 None:intergenic 30.0%
TAGATTTCCATACAGATTTG+GGG + chr8.4:30590704-30590723 None:intergenic 30.0%
TATCTACACATGAATGAACA+AGG + chr8.4:30590203-30590222 None:intergenic 30.0%
TCGAATTTCTCAAAGTAAAC+TGG + chr8.4:30587657-30587676 None:intergenic 30.0%
TCTAACAGACTAATATGCAA+TGG - chr8.4:30591337-30591356 MS.gene23789:intron 30.0%
TGAAAAAACGGAAATGCAAA+TGG + chr8.4:30589630-30589649 None:intergenic 30.0%
TGTACTTTGTGGAATATTGA+AGG - chr8.4:30590493-30590512 MS.gene23789:CDS 30.0%
TGTTGAAAAAGTCATTCTAG+AGG - chr8.4:30592275-30592294 MS.gene23789:CDS 30.0%
TTAGGATGTAGAAGTTTAGA+GGG - chr8.4:30590281-30590300 MS.gene23789:intron 30.0%
TTATTAGGGAGAATACTGAA+GGG - chr8.4:30587892-30587911 MS.gene23789:intron 30.0%
TTATTATGTAGACAGAGTTG+AGG + chr8.4:30591816-30591835 None:intergenic 30.0%
TTCAACCTTTAACGTATCTT+AGG - chr8.4:30590263-30590282 MS.gene23789:intron 30.0%
TTCTTTGGATGGATAAGTTA+GGG + chr8.4:30590454-30590473 None:intergenic 30.0%
TTTAAGGGTAGAAATATGTC+GGG + chr8.4:30591893-30591912 None:intergenic 30.0%
! AATTTAAGTTCGAACCTAAG+AGG + chr8.4:30588740-30588759 None:intergenic 30.0%
! ATATTTCTACCCTTAAATGG+AGG - chr8.4:30591896-30591915 MS.gene23789:CDS 30.0%
! ATTTGAAGTTGTTTGTAGTG+TGG - chr8.4:30588097-30588116 MS.gene23789:intron 30.0%
! CATTGGAAACTAAGTTGAAA+TGG - chr8.4:30588950-30588969 MS.gene23789:intron 30.0%
! CCTTTTCAAACAGAAAGAAA+GGG + chr8.4:30590323-30590342 None:intergenic 30.0%
! CTACTACCTTCACAAATTTT+TGG + chr8.4:30591603-30591622 None:intergenic 30.0%
! GACATATTTCTACCCTTAAA+TGG - chr8.4:30591893-30591912 MS.gene23789:CDS 30.0%
! GGTCTTATCTTTATTCTACT+TGG + chr8.4:30588194-30588213 None:intergenic 30.0%
! TCCTTTTCAAACAGAAAGAA+AGG + chr8.4:30590324-30590343 None:intergenic 30.0%
! TCTATCATAGGCTTTCTTTT+AGG - chr8.4:30591209-30591228 MS.gene23789:intron 30.0%
!! AAATATGAATATGATGGTGG+TGG - chr8.4:30591935-30591954 MS.gene23789:CDS 30.0%
!! CAAACTGAGTTTTATAAGTC+AGG - chr8.4:30591462-30591481 MS.gene23789:intron 30.0%
!! GGCTTTTTAGTAGTGTATTT+AGG + chr8.4:30591795-30591814 None:intergenic 30.0%
!! TAGGCAAGAAGGTATTTAAA+AGG + chr8.4:30590836-30590855 None:intergenic 30.0%
!!! AGACCTAAATTTTGTTGTTG+TGG - chr8.4:30591749-30591768 MS.gene23789:intron 30.0%
!!! CATGATTCCTTTTTTGCTAT+TGG - chr8.4:30589785-30589804 MS.gene23789:intron 30.0%
!!! GTTTTTTCATGAACTGTTTG+TGG - chr8.4:30589641-30589660 MS.gene23789:intron 30.0%
AAGTGAAGCAATCATGAATG+AGG - chr8.4:30588532-30588551 MS.gene23789:intron 35.0%
AATATAATGAAGCTTGCGGA+TGG - chr8.4:30589343-30589362 MS.gene23789:intron 35.0%
ACCAACATTACCTGCAAAAA+AGG + chr8.4:30592094-30592113 None:intergenic 35.0%
AGTTGCAAGACAAAATCATC+TGG + chr8.4:30590595-30590614 None:intergenic 35.0%
ATCAACTTAGAAACGAGTCA+TGG - chr8.4:30589715-30589734 MS.gene23789:intron 35.0%
ATGTAGAAGTTTAGAGGGAA+GGG - chr8.4:30590286-30590305 MS.gene23789:intron 35.0%
ATTGATCGAGGAGAAAAACA+TGG - chr8.4:30587998-30588017 MS.gene23789:intron 35.0%
ATTTCCAGGATAATGTGCTT+AGG + chr8.4:30589872-30589891 None:intergenic 35.0%
CCACTAATACCTCCATTTAA+GGG + chr8.4:30591908-30591927 None:intergenic 35.0%
CCCTTTCTTTCTGTTTGAAA+AGG - chr8.4:30590320-30590339 MS.gene23789:intron 35.0%
CTTAGGATGTAGAAGTTTAG+AGG - chr8.4:30590280-30590299 MS.gene23789:intron 35.0%
GACTTTGATCTCAACTTACA+TGG + chr8.4:30590118-30590137 None:intergenic 35.0%
GATCTCAACTTACATGGTTT+GGG + chr8.4:30590112-30590131 None:intergenic 35.0%
GGTTTGTGTTTGTGATTATC+AGG + chr8.4:30592064-30592083 None:intergenic 35.0%
GTTATTAGGGAGAATACTGA+AGG - chr8.4:30587891-30587910 MS.gene23789:intron 35.0%
GTTCTTTGGATGGATAAGTT+AGG + chr8.4:30590455-30590474 None:intergenic 35.0%
TAAGCAAGAATCATTGCTGT+GGG - chr8.4:30590550-30590569 MS.gene23789:CDS 35.0%
TATTAGGGAGAATACTGAAG+GGG - chr8.4:30587893-30587912 MS.gene23789:intron 35.0%
TATTCACACATCAGATAACG+TGG + chr8.4:30590865-30590884 None:intergenic 35.0%
TCAGATAACGTGGTAAAAGT+AGG + chr8.4:30590855-30590874 None:intergenic 35.0%
TCTTTCTGTTTGAAAAGGAG+AGG - chr8.4:30590325-30590344 MS.gene23789:intron 35.0%
TCTTTGGATGGATAAGTTAG+GGG + chr8.4:30590453-30590472 None:intergenic 35.0%
TGAATCGATCCGTAAGAATA+AGG - chr8.4:30587716-30587735 MS.gene23789:intron 35.0%
TGATCTCAACTTACATGGTT+TGG + chr8.4:30590113-30590132 None:intergenic 35.0%
TGTTTATCCATGTCACAGAA+GGG + chr8.4:30590144-30590163 None:intergenic 35.0%
TTAGACACGTATGTTTGCAA+GGG - chr8.4:30588315-30588334 MS.gene23789:intron 35.0%
TTCTGTGACATGGATAAACA+AGG - chr8.4:30590144-30590163 MS.gene23789:intron 35.0%
TTGTTTATCCATGTCACAGA+AGG + chr8.4:30590145-30590164 None:intergenic 35.0%
TTTAATTCCAGGATACTTGG+TGG + chr8.4:30589398-30589417 None:intergenic 35.0%
TTTAGACACGTATGTTTGCA+AGG - chr8.4:30588314-30588333 MS.gene23789:intron 35.0%
TTTCTCTTTCCAAACCTCTT+AGG - chr8.4:30588723-30588742 MS.gene23789:intron 35.0%
TTTGAGAAATTCGACGTACA+TGG - chr8.4:30587663-30587682 MS.gene23789:CDS 35.0%
! ACCAGGTTTTCAAAAAGGTT+AGG + chr8.4:30591240-30591259 None:intergenic 35.0%
! ACTAAGTTGAAATGGTGTCA+AGG - chr8.4:30588958-30588977 MS.gene23789:intron 35.0%
! AGACTAATATGCAATGGGTT+AGG - chr8.4:30591343-30591362 MS.gene23789:intron 35.0%
! CACATACCATCTCTTTTGTT+TGG - chr8.4:30589537-30589556 MS.gene23789:intron 35.0%
! CCAGGTTTTCAAAAAGGTTA+GGG + chr8.4:30591239-30591258 None:intergenic 35.0%
! CTCTACAATCCGATTTTGTA+AGG - chr8.4:30588244-30588263 MS.gene23789:intron 35.0%
! GCTTGTCTAGATGATTGTTT+TGG - chr8.4:30590923-30590942 MS.gene23789:intron 35.0%
! TGTTGTACTGATGCAGTATT+GGG - chr8.4:30589190-30589209 MS.gene23789:intron 35.0%
! TTGTTGTACTGATGCAGTAT+TGG - chr8.4:30589189-30589208 MS.gene23789:intron 35.0%
! TTTCAACAGCGTTTTCCAAA+CGG + chr8.4:30592263-30592282 None:intergenic 35.0%
!! TCAAGTTTTATCCCACTAAG+TGG + chr8.4:30588051-30588070 None:intergenic 35.0%
!! TCATAGGCTTTCTTTTAGGT+TGG - chr8.4:30591213-30591232 MS.gene23789:intron 35.0%
!! TGAAAGTACTAATGGTAGGT+TGG - chr8.4:30591961-30591980 MS.gene23789:CDS 35.0%
!! TGTTCTAAACTTGATGGACT+AGG - chr8.4:30590886-30590905 MS.gene23789:intron 35.0%
!!! GCGGTTTGACTTGATATTTT+TGG - chr8.4:30589221-30589240 MS.gene23789:intron 35.0%
AAAGTACATCTACATCCTCC+AGG + chr8.4:30590481-30590500 None:intergenic 40.0%
AAGATTCAGGGTAGGTCAAA+TGG + chr8.4:30590045-30590064 None:intergenic 40.0%
AAGTACATCTACATCCTCCA+GGG + chr8.4:30590480-30590499 None:intergenic 40.0%
AAGTTCGAACCTAAGAGGTT+TGG + chr8.4:30588735-30588754 None:intergenic 40.0%
ACAAAAGACAGCTAATCCAG+TGG - chr8.4:30592179-30592198 MS.gene23789:CDS 40.0%
ACCTTGCCAAACAAAAGAGA+TGG + chr8.4:30589546-30589565 None:intergenic 40.0%
ATCTCCTAAGCACATTATCC+TGG - chr8.4:30589865-30589884 MS.gene23789:intron 40.0%
ATGGACTCATAATACGAGTG+AGG + chr8.4:30589611-30589630 None:intergenic 40.0%
ATGGATAAGTTAGGGGAGAA+AGG + chr8.4:30590446-30590465 None:intergenic 40.0%
ATTTCGCTAATCAGCACGTT+TGG - chr8.4:30588846-30588865 MS.gene23789:intron 40.0%
CATCAAAAGTCGTGATGTTG+TGG + chr8.4:30588499-30588518 None:intergenic 40.0%
CCAGTATCTCACATCAATGA+CGG - chr8.4:30588888-30588907 MS.gene23789:intron 40.0%
CGTCATTGATGTGAGATACT+GGG + chr8.4:30588890-30588909 None:intergenic 40.0%
CTAAGCAAGAATCATTGCTG+TGG - chr8.4:30590549-30590568 MS.gene23789:CDS 40.0%
GAAACGTACATGTAAGGAGA+AGG + chr8.4:30588790-30588809 None:intergenic 40.0%
GAAAGCCTATGATAGACAAC+AGG + chr8.4:30591205-30591224 None:intergenic 40.0%
GACAAAATCATCTGGACCTA+AGG + chr8.4:30590587-30590606 None:intergenic 40.0%
GAGGAAGAAACGTACATGTA+AGG + chr8.4:30588796-30588815 None:intergenic 40.0%
GAGGATGTAGATGTACTTTG+TGG - chr8.4:30590482-30590501 MS.gene23789:CDS 40.0%
GAGTAGAAAAGATTCAGGGT+AGG + chr8.4:30590053-30590072 None:intergenic 40.0%
GATGTAGAAGTTTAGAGGGA+AGG - chr8.4:30590285-30590304 MS.gene23789:intron 40.0%
GCCACTAATACCTCCATTTA+AGG + chr8.4:30591909-30591928 None:intergenic 40.0%
GGCTGAGAAGAACTGTTATT+TGG + chr8.4:30590011-30590030 None:intergenic 40.0%
GGTTTGTCTTAAAGGTGGAT+TGG - chr8.4:30587737-30587756 MS.gene23789:intron 40.0%
GTTCGCTTAATGTTCAGTTG+AGG - chr8.4:30587784-30587803 MS.gene23789:intron 40.0%
TACCATGACATCAAACTGCT+CGG + chr8.4:30589470-30589489 None:intergenic 40.0%
TAGGTTACCCCAAATCTGTA+TGG - chr8.4:30590694-30590713 MS.gene23789:intron 40.0%
TCAACGTTATCATGTCGTGT+AGG + chr8.4:30587864-30587883 None:intergenic 40.0%
TCACTTGCTTTCTGTTGTTC+AGG + chr8.4:30589306-30589325 None:intergenic 40.0%
TCTCATCAGCTATGATGCTT+AGG - chr8.4:30592211-30592230 MS.gene23789:CDS 40.0%
TCTGACCTGTTGTCTATCAT+AGG - chr8.4:30591197-30591216 MS.gene23789:intron 40.0%
TGACATGAAAGCTGTACCTA+CGG - chr8.4:30587686-30587705 MS.gene23789:CDS 40.0%
TGGATAAGTTAGGGGAGAAA+GGG + chr8.4:30590445-30590464 None:intergenic 40.0%
TTACAATTGCATATGTGGCC+AGG + chr8.4:30588824-30588843 None:intergenic 40.0%
TTTATCCCACTAAGTGGTGT+CGG + chr8.4:30588045-30588064 None:intergenic 40.0%
! ACCTGCAAAAAAGGCACAAA+TGG + chr8.4:30592085-30592104 None:intergenic 40.0%
! ATCGATTCAAGAACTTCCGT+AGG + chr8.4:30587705-30587724 None:intergenic 40.0%
! GATGTGAGATACTGGGTTTT+GGG + chr8.4:30588883-30588902 None:intergenic 40.0%
! GATTTTGTCTTGCAACTCAC+TGG - chr8.4:30590598-30590617 MS.gene23789:intron 40.0%
! GCATACTTTTACCTTGTGCT+AGG - chr8.4:30590675-30590694 MS.gene23789:intron 40.0%
! TACTGCATCGACAACTTCTT+GGG + chr8.4:30592340-30592359 None:intergenic 40.0%
! TCATTCTAGAGGGCAAGTAT+CGG - chr8.4:30592286-30592305 MS.gene23789:CDS 40.0%
! TGATGTGAGATACTGGGTTT+TGG + chr8.4:30588884-30588903 None:intergenic 40.0%
! TTACTGCATCGACAACTTCT+TGG + chr8.4:30592341-30592360 None:intergenic 40.0%
!! AAACGTGCTGATTAGCGAAA+TGG + chr8.4:30588847-30588866 None:intergenic 40.0%
!! AAGTATCGGACAAAGGATCT+TGG - chr8.4:30592300-30592319 MS.gene23789:CDS 40.0%
!! ACCATCTCTTTTGTTTGGCA+AGG - chr8.4:30589542-30589561 MS.gene23789:intron 40.0%
!! ACGTTTCTTCCTCTAAAACC+TGG - chr8.4:30588803-30588822 MS.gene23789:intron 40.0%
!! CCCTAACCTTTTTGAAAACC+TGG - chr8.4:30591236-30591255 MS.gene23789:intron 40.0%
!! CCCTTAAATGGAGGTATTAG+TGG - chr8.4:30591905-30591924 MS.gene23789:CDS 40.0%
!! CTTTGAGATGGTGAATGGTT+CGG + chr8.4:30587508-30587527 None:intergenic 40.0%
!! GTGGTGAAAGTACTAATGGT+AGG - chr8.4:30591957-30591976 MS.gene23789:CDS 40.0%
!! TATGAATATGATGGTGGTGG+TGG - chr8.4:30591938-30591957 MS.gene23789:CDS 40.0%
!!! ACCATTTGTGCCTTTTTTGC+AGG - chr8.4:30592081-30592100 MS.gene23789:CDS 40.0%
!!! GCCTTTTTTGCAGGTAATGT+TGG - chr8.4:30592090-30592109 MS.gene23789:CDS 40.0%
!!! TGCTATTGGTTTTTCACTGC+TGG - chr8.4:30589799-30589818 MS.gene23789:intron 40.0%
ACCATGACATCAAACTGCTC+GGG + chr8.4:30589469-30589488 None:intergenic 45.0%
AGAAGTTTAGAGGGAAGGGA+GGG - chr8.4:30590290-30590309 MS.gene23789:intron 45.0%
AGGTTGGGAACATGGGAAAA+AGG - chr8.4:30589831-30589850 MS.gene23789:intron 45.0%
AGTCAAACCCTTCTGTGACA+TGG - chr8.4:30590134-30590153 MS.gene23789:intron 45.0%
ATCCATCCAAAGAACAACCC+TGG - chr8.4:30590460-30590479 MS.gene23789:CDS 45.0%
ATCGGACAAAGGATCTTGGA+GGG - chr8.4:30592304-30592323 MS.gene23789:CDS 45.0%
ATTCAGGGTAGGTCAAATGG+AGG + chr8.4:30590042-30590061 None:intergenic 45.0%
CAAGAATCATTGCTGTGGGT+TGG - chr8.4:30590554-30590573 MS.gene23789:CDS 45.0%
CAGTCAAAGGTTGGGAACAT+GGG - chr8.4:30589824-30589843 MS.gene23789:intron 45.0%
CCGTCATTGATGTGAGATAC+TGG + chr8.4:30588891-30588910 None:intergenic 45.0%
CGCTTCCATTAGTTGCTCAA+CGG + chr8.4:30587625-30587644 None:intergenic 45.0%
CGTGGTAAAAGTAGGCAAGA+AGG + chr8.4:30590847-30590866 None:intergenic 45.0%
CTTAAGACTTTCGACGACAC+CGG + chr8.4:30587949-30587968 None:intergenic 45.0%
CTTGAACATGAGGTTGTTCC+CGG - chr8.4:30587927-30587946 MS.gene23789:intron 45.0%
GCTAATCAGCACGTTTGGTT+GGG - chr8.4:30588851-30588870 MS.gene23789:intron 45.0%
GGCATGTGTAAAGGAGAATG+TGG + chr8.4:30590091-30590110 None:intergenic 45.0%
GTACATGTAAGGAGAAGGCA+TGG + chr8.4:30588785-30588804 None:intergenic 45.0%
GTCAAGGCCAGGGTAATATT+TGG - chr8.4:30588974-30588993 MS.gene23789:intron 45.0%
GTTCTTGGAATCTTGTCGAG+AGG - chr8.4:30589369-30589388 MS.gene23789:intron 45.0%
TAGAAGTTTAGAGGGAAGGG+AGG - chr8.4:30590289-30590308 MS.gene23789:intron 45.0%
TATCGGACAAAGGATCTTGG+AGG - chr8.4:30592303-30592322 MS.gene23789:CDS 45.0%
TCAGTCAAAGGTTGGGAACA+TGG - chr8.4:30589823-30589842 MS.gene23789:intron 45.0%
TGTCTTGGGCAAACTAGACT+AGG - chr8.4:30591846-30591865 MS.gene23789:intron 45.0%
TTAAGACTTTCGACGACACC+GGG + chr8.4:30587948-30587967 None:intergenic 45.0%
TTAGGGGAGAAAGGGATTGA+AGG + chr8.4:30590437-30590456 None:intergenic 45.0%
! AATACTGAAGGGGAGTATGC+TGG - chr8.4:30587903-30587922 MS.gene23789:intron 45.0%
! AGATGGTGAATGGTTCGGAT+TGG + chr8.4:30587503-30587522 None:intergenic 45.0%
! ATTTGGGGTAACCTAGCACA+AGG + chr8.4:30590689-30590708 None:intergenic 45.0%
! CATGGTTTGGGCATGTGTAA+AGG + chr8.4:30590100-30590119 None:intergenic 45.0%
! GAGCTGTCGTCTACCATTTT+AGG - chr8.4:30589061-30589080 MS.gene23789:CDS 45.0%
! GATGGTGAATGGTTCGGATT+GGG + chr8.4:30587502-30587521 None:intergenic 45.0%
! GCAGTATTGGGTTGTGTTTG+CGG - chr8.4:30589202-30589221 MS.gene23789:intron 45.0%
! TACTAATGGTAGGTTGGAGC+TGG - chr8.4:30591967-30591986 MS.gene23789:CDS 45.0%
! TGAATGGTTCGGATTGGGAT+CGG + chr8.4:30587497-30587516 None:intergenic 45.0%
! TTGAAATGGTGTCAAGGCCA+GGG - chr8.4:30588964-30588983 MS.gene23789:intron 45.0%
! TTGTTGGGTTTAGGGCTTCT+GGG - chr8.4:30591990-30592009 MS.gene23789:CDS 45.0%
!! AGGTGGATTGGTTACTCCTA+TGG - chr8.4:30587749-30587768 MS.gene23789:intron 45.0%
!! CATATGTGGCCAGGTTTTAG+AGG + chr8.4:30588815-30588834 None:intergenic 45.0%
!! CATCGCTTTGAGATGGTGAA+TGG + chr8.4:30587513-30587532 None:intergenic 45.0%
!! GGTGGATTGGTTACTCCTAT+GGG - chr8.4:30587750-30587769 MS.gene23789:intron 45.0%
!! GGTGGTGGTGAAAGTACTAA+TGG - chr8.4:30591953-30591972 MS.gene23789:CDS 45.0%
!! GTATGCTGGTCTTGAACATG+AGG - chr8.4:30587917-30587936 MS.gene23789:intron 45.0%
!! GTGGGTTGGTTATCAACCTT+AGG - chr8.4:30590568-30590587 MS.gene23789:intron 45.0%
!! TGAGAGAAGGTGTTTGAGGA+GGG + chr8.4:30587472-30587491 None:intergenic 45.0%
!! TGCTGGTTCAGTCAAAGGTT+GGG - chr8.4:30589816-30589835 MS.gene23789:intron 45.0%
!! TTCACTGCTGGTTCAGTCAA+AGG - chr8.4:30589811-30589830 MS.gene23789:intron 45.0%
!! TTGAGAGAAGGTGTTTGAGG+AGG + chr8.4:30587473-30587492 None:intergenic 45.0%
CATCAAAAGCCTCTTCCCTC+AGG + chr8.4:30588584-30588603 None:intergenic 50.0%
CATCCAAAGAACAACCCTGG+AGG - chr8.4:30590463-30590482 MS.gene23789:CDS 50.0%
CATCCTCCAGGGTTGTTCTT+TGG + chr8.4:30590469-30590488 None:intergenic 50.0%
CCCAGAGCAAAATCTCCTGA+GGG - chr8.4:30588566-30588585 MS.gene23789:intron 50.0%
CCCTGTGCAAAAGCTCTTGA+GGG - chr8.4:30588686-30588705 MS.gene23789:intron 50.0%
CCTAGACAGTGAGTCAACAG+AGG + chr8.4:30591073-30591092 None:intergenic 50.0%
CGCTAATCAGCACGTTTGGT+TGG - chr8.4:30588850-30588869 MS.gene23789:intron 50.0%
CTAGTTGCAAATACTGCGGC+AGG - chr8.4:30590721-30590740 MS.gene23789:intron 50.0%
CTCCAGGGTTGTTCTTTGGA+TGG + chr8.4:30590465-30590484 None:intergenic 50.0%
GAACTAACACCACCACCCAT+AGG + chr8.4:30587768-30587787 None:intergenic 50.0%
GAAGTTTAGAGGGAAGGGAG+GGG - chr8.4:30590291-30590310 MS.gene23789:intron 50.0%
GAGCATGCTGTGTTTGAGCA+GGG - chr8.4:30592117-30592136 MS.gene23789:CDS 50.0%
GCAAAAGCTCTTGAGGGAAG+AGG - chr8.4:30588692-30588711 MS.gene23789:intron 50.0%
GCAAAATCTCCTGAGGGAAG+AGG - chr8.4:30588572-30588591 MS.gene23789:intron 50.0%
GGAGCTGGTTGTTGGGTTTA+GGG - chr8.4:30591982-30592001 MS.gene23789:CDS 50.0%
GGCAAACTAGACTAGGCCAT+AGG - chr8.4:30591853-30591872 MS.gene23789:intron 50.0%
GGTCAAATGGAGGCAGAGAA+AGG + chr8.4:30590032-30590051 None:intergenic 50.0%
GGTCAGCAAATGCAGGAAAC+TGG + chr8.4:30592242-30592261 None:intergenic 50.0%
GGTGCTTCAGCAGGAAATGT+TGG - chr8.4:30592138-30592157 MS.gene23789:CDS 50.0%
TCATGTCGTGTAGGTAACCC+AGG + chr8.4:30587855-30587874 None:intergenic 50.0%
TCCAAACGGTCAGCAAATGC+AGG + chr8.4:30592249-30592268 None:intergenic 50.0%
TGAGCATGCTGTGTTTGAGC+AGG - chr8.4:30592116-30592135 MS.gene23789:CDS 50.0%
TGGAGCTGGTTGTTGGGTTT+AGG - chr8.4:30591981-30592000 MS.gene23789:CDS 50.0%
TGTAGCCGACACCACTTAGT+GGG - chr8.4:30588037-30588056 MS.gene23789:intron 50.0%
TGTTCACGTCTCAGCATGAC+TGG + chr8.4:30591400-30591419 None:intergenic 50.0%
TTGGTTACTCCTATGGGTGG+TGG - chr8.4:30587756-30587775 MS.gene23789:intron 50.0%
TTGTAGCCGACACCACTTAG+TGG - chr8.4:30588036-30588055 MS.gene23789:intron 50.0%
! AAGGAGAAGGCATGGCAAGA+CGG + chr8.4:30588777-30588796 None:intergenic 50.0%
! AAGGTGTTTGAGGAGGGGTA+TGG + chr8.4:30587466-30587485 None:intergenic 50.0%
! AGCTTTTGCACAGGGGTTAC+GGG + chr8.4:30588681-30588700 None:intergenic 50.0%
! CCCTCAAGAGCTTTTGCACA+GGG + chr8.4:30588689-30588708 None:intergenic 50.0%
! CCCTCAGGAGATTTTGCTCT+GGG + chr8.4:30588569-30588588 None:intergenic 50.0%
! CCTCAAGAGCTTTTGCACAG+GGG + chr8.4:30588688-30588707 None:intergenic 50.0%
! CCTCAGGAGATTTTGCTCTG+GGG + chr8.4:30588568-30588587 None:intergenic 50.0%
! CTGAGGGAAGAGGCTTTTGA+TGG - chr8.4:30588582-30588601 MS.gene23789:intron 50.0%
! GAATGGTTCGGATTGGGATC+GGG + chr8.4:30587496-30587515 None:intergenic 50.0%
! GAGCTTTTGCACAGGGGTTA+CGG + chr8.4:30588682-30588701 None:intergenic 50.0%
! GTAGGTTGGAGCTGGTTGTT+GGG - chr8.4:30591975-30591994 MS.gene23789:CDS 50.0%
! GTTGAAATGGTGTCAAGGCC+AGG - chr8.4:30588963-30588982 MS.gene23789:intron 50.0%
! GTTGTTGGGTTTAGGGCTTC+TGG - chr8.4:30591989-30592008 MS.gene23789:CDS 50.0%
! TATGTCGGGTTGTCTGACAG+AGG + chr8.4:30591879-30591898 None:intergenic 50.0%
! TCCCTCAAGAGCTTTTGCAC+AGG + chr8.4:30588690-30588709 None:intergenic 50.0%
! TCCCTCAGGAGATTTTGCTC+TGG + chr8.4:30588570-30588589 None:intergenic 50.0%
! TCCTGCATTTGCTGACCGTT+TGG - chr8.4:30592245-30592264 MS.gene23789:CDS 50.0%
! TGCATCGACAACTTCTTGGG+TGG + chr8.4:30592337-30592356 None:intergenic 50.0%
!! AGAGGGCAAGTATCGGACAA+AGG - chr8.4:30592293-30592312 MS.gene23789:CDS 50.0%
!! ATTGGGATCGGGTTGAGAGA+AGG + chr8.4:30587485-30587504 None:intergenic 50.0%
!! CCTCTGTTGACTCACTGTCT+AGG - chr8.4:30591070-30591089 MS.gene23789:intron 50.0%
!! CGGTGTCGTCGAAAGTCTTA+AGG - chr8.4:30587947-30587966 MS.gene23789:intron 50.0%
!! CTGCTGGTTCAGTCAAAGGT+TGG - chr8.4:30589815-30589834 MS.gene23789:intron 50.0%
!! GAGAGAAGGTGTTTGAGGAG+GGG + chr8.4:30587471-30587490 None:intergenic 50.0%
!! GCTTGCGGATGGTTTGTTCT+TGG - chr8.4:30589354-30589373 MS.gene23789:intron 50.0%
!! GGATTGGTTACTCCTATGGG+TGG - chr8.4:30587753-30587772 MS.gene23789:intron 50.0%
!! GGGTTGAGAGAAGGTGTTTG+AGG + chr8.4:30587476-30587495 None:intergenic 50.0%
!! GGTTACGCATCGCTTTGAGA+TGG + chr8.4:30587520-30587539 None:intergenic 50.0%
AATTAGGGTTACGGGACGGG+GGG + chr8.4:30587568-30587587 None:intergenic 55.0%
CATTAGTTGCTCAACGGCGC+CGG + chr8.4:30587619-30587638 None:intergenic 55.0%
CCCCAGAGCAAAATCTCCTG+AGG - chr8.4:30588565-30588584 MS.gene23789:intron 55.0%
CCCCTGTGCAAAAGCTCTTG+AGG - chr8.4:30588685-30588704 MS.gene23789:intron 55.0%
CGGGAATTAGGGTTACGGGA+CGG + chr8.4:30587572-30587591 None:intergenic 55.0%
CGTCCCGTAACCCTAATTCC+CGG - chr8.4:30587570-30587589 MS.gene23789:CDS 55.0%
GAATTAGGGTTACGGGACGG+GGG + chr8.4:30587569-30587588 None:intergenic 55.0%
GAGGTTGCCACCAAGTATCC+TGG - chr8.4:30589388-30589407 MS.gene23789:intron 55.0%
GCCCGAGCAGTTTGATGTCA+TGG - chr8.4:30589465-30589484 MS.gene23789:intron 55.0%
GGAATTAGGGTTACGGGACG+GGG + chr8.4:30587570-30587589 None:intergenic 55.0%
GGGAATTAGGGTTACGGGAC+GGG + chr8.4:30587571-30587590 None:intergenic 55.0%
GGTTGTCTGACAGAGGCCTA+TGG + chr8.4:30591872-30591891 None:intergenic 55.0%
GTAACCCTAATTCCCGGCGA+CGG - chr8.4:30587576-30587595 MS.gene23789:CDS 55.0%
GTAACCTACATGCACCGTCC+CGG - chr8.4:30587534-30587553 MS.gene23789:CDS 55.0%
GTCGCCGGGAATTAGGGTTA+CGG + chr8.4:30587577-30587596 None:intergenic 55.0%
TAACCCTAATTCCCGGCGAC+GGG - chr8.4:30587577-30587596 MS.gene23789:CDS 55.0%
TCGCCGGGAATTAGGGTTAC+GGG + chr8.4:30587576-30587595 None:intergenic 55.0%
TGGCAAGACGGAGCCATTCA+AGG + chr8.4:30588765-30588784 None:intergenic 55.0%
! AATACTGCGGCAGGCATTGC+TGG - chr8.4:30590730-30590749 MS.gene23789:intron 55.0%
! GCTTTTGCACAGGGGTTACG+GGG + chr8.4:30588680-30588699 None:intergenic 55.0%
! GGTAGGTTGGAGCTGGTTGT+TGG - chr8.4:30591974-30591993 MS.gene23789:CDS 55.0%
! TTTGAGCAGGGTGCTTCAGC+AGG - chr8.4:30592129-30592148 MS.gene23789:CDS 55.0%
!! GATGAGAGAAGAAGCGCCAC+TGG + chr8.4:30592198-30592217 None:intergenic 55.0%
CGGCGCCGTTGAGCAACTAA+TGG - chr8.4:30587617-30587636 MS.gene23789:CDS 60.0%
CTAATTCCCGGCGACGGGAT+CGG - chr8.4:30587582-30587601 MS.gene23789:CDS 60.0%
GATCCCGTCGCCGGGAATTA+GGG + chr8.4:30587583-30587602 None:intergenic 60.0%
GGGATCGGACCACTCGTAAC+CGG - chr8.4:30587597-30587616 MS.gene23789:CDS 60.0%
CGATCCCGTCGCCGGGAATT+AGG + chr8.4:30587584-30587603 None:intergenic 65.0%
TACATGCACCGTCCCGGCGA+CGG - chr8.4:30587540-30587559 MS.gene23789:CDS 65.0%
! ACTGCGGCAGGCATTGCTGG+AGG - chr8.4:30590733-30590752 MS.gene23789:intron 65.0%
! GCAGGCATTGCTGGAGGCAC+TGG - chr8.4:30590739-30590758 MS.gene23789:intron 65.0%
! GGCACTGGAGTCATGCCAGG+AGG - chr8.4:30590754-30590773 MS.gene23789:intron 65.0%
!! GGAGGCACTGGAGTCATGCC+AGG - chr8.4:30590751-30590770 MS.gene23789:intron 65.0%
!! TCAACGGCGCCGGTTACGAG+TGG + chr8.4:30587609-30587628 None:intergenic 65.0%
AGTGGTCCGATCCCGTCGCC+GGG + chr8.4:30587591-30587610 None:intergenic 70.0%
GAGTGGTCCGATCCCGTCGC+CGG + chr8.4:30587592-30587611 None:intergenic 70.0%
GTCGCCGGGACGGTGCATGT+AGG + chr8.4:30587541-30587560 None:intergenic 70.0%
! GGACGGGGGGTTCCGTCGCC+GGG + chr8.4:30587555-30587574 None:intergenic 80.0%
! GGGACGGGGGGTTCCGTCGC+CGG + chr8.4:30587556-30587575 None:intergenic 80.0%
! GGGGGGTTCCGTCGCCGGGA+CGG + chr8.4:30587551-30587570 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 30587447 30592377 30587447 ID=MS.gene23789
chr8.4 mRNA 30587447 30592377 30587447 ID=MS.gene23789.t1;Parent=MS.gene23789
chr8.4 exon 30591856 30592377 30591856 ID=MS.gene23789.t1.exon1;Parent=MS.gene23789.t1
chr8.4 CDS 30591856 30592377 30591856 ID=cds.MS.gene23789.t1;Parent=MS.gene23789.t1
chr8.4 exon 30590338 30590577 30590338 ID=MS.gene23789.t1.exon2;Parent=MS.gene23789.t1
chr8.4 CDS 30590338 30590577 30590338 ID=cds.MS.gene23789.t1;Parent=MS.gene23789.t1
chr8.4 exon 30589049 30589127 30589049 ID=MS.gene23789.t1.exon3;Parent=MS.gene23789.t1
chr8.4 CDS 30589049 30589127 30589049 ID=cds.MS.gene23789.t1;Parent=MS.gene23789.t1
chr8.4 exon 30587447 30587721 30587447 ID=MS.gene23789.t1.exon4;Parent=MS.gene23789.t1
chr8.4 CDS 30587447 30587721 30587447 ID=cds.MS.gene23789.t1;Parent=MS.gene23789.t1
Gene Sequence

>MS.gene23789

ATGGCAACAAGAAGATCCATACCCCTCCTCAAACACCTTCTCTCAACCCGATCCCAATCCGAACCATTCACCATCTCAAAGCGATGCGTAACCTACATGCACCGTCCCGGCGACGGAACCCCCCGTCCCGTAACCCTAATTCCCGGCGACGGGATCGGACCACTCGTAACCGGCGCCGTTGAGCAACTAATGGAAGCGATGCACGCGCCAGTTTACTTTGAGAAATTCGACGTACATGGTGACATGAAAGCTGTACCTACGGAAGTTCTTGAATCGATCCGTAAGAATAAGGTTTGTCTTAAAGGTGGATTGGTTACTCCTATGGGTGGTGGTGTTAGTTCGCTTAATGTTCAGTTGAGGAAAGAGCTTGATCTTTATGCTTCGCTTGTTAATTGTTTTAATCTTCCTGGGTTACCTACACGACATGATAACGTTGATATTGTAGTTATTAGGGAGAATACTGAAGGGGAGTATGCTGGTCTTGAACATGAGGTTGTTCCCGGTGTCGTCGAAAGTCTTAAGGTATAATTTCTATCATTTCTTTGTTTTATATTGATCGAGGAGAAAAACATGGTTTTTGATAGAGCATTTGTAGCCGACACCACTTAGTGGGATAAAACTTGATTGTTGTTGTTGTTGCTATGATTTCGATTTGAAGTTGTTTGTAGTGTGGAATAAGAAAAATTCAAAATTAAAATCATTAAATTCTTGTGTATGATTGAGATTTGAGAATATCGGAAAAATCCAAGTAGAATAAAGATAAGACCTGAAATGAGTTTATAAAGAGTTACTTCTAACTCTACAATCCGATTTTGTAAGGATGAGTTAGACTTAATCTTAGAACCTAATAGAGAATCCATAATGTTCTTTAGACACGTATGTTTGCAAGGGAAATCCAATTATAGTCATTTTTGTAATAATTTTAGGTTTGAGTAGGATTTTGAATATTTTAAGGAATGAATATTAATTTGAAATTTCATAAATGTGTAGGGATTAGTTTATTTCTTAATTTTGTGGTTTCTTAAAAAGGTTTGTGATTGCAATATGGGCCACAACATCACGACTTTTGATGTCTTTGCGACTGTAAGTGAAGCAATCATGAATGAGGTTGCTTGTAACCCCAGAGCAAAATCTCCTGAGGGAAGAGGCTTTTGATGGCTTTCAATCTTGTAGCCAATAAACTAGGTTATTGATTGAAAATAGATGTATTACAGAAGGAACTAAGAAGCTCCCCGTAACCCCTGTGCAAAAGCTCTTGAGGGAAGAGGCATTTCTCTTTCTCTTTCCAAACCTCTTAGGTTCGAACTTAAATTAACCTTGAATGGCTCCGTCTTGCCATGCCTTCTCCTTACATGTACGTTTCTTCCTCTAAAACCTGGCCACATATGCAATTGTAACCATTTCGCTAATCAGCACGTTTGGTTGGGCTCAGTCCCAAAACCCAGTATCTCACATCAATGACGGTGACACAACTTCAATTTAAAACCTTGGTTAAGTATTCAACATTGGAAACTAAGTTGAAATGGTGTCAAGGCCAGGGTAATATTTGGATTAAAACGAGTCACAATTACCAAATTCAGTACTTTTTTTTTGTTTTCGTTAATTTTATTGACTGAGCTGTCGTCTACCATTTTAGGACATACTTATGTATAAATATTTGAAAAATAAGGAATGAAAGTAGAAAACATTCTCACAAATTATATAGGTTCTTTTCCTTTGGAATATCTATCTAGATTTTTTTGTTGTTGTACTGATGCAGTATTGGGTTGTGTTTGCGGTTTGACTTGATATTTTTGGTAGGTGATAACAAAGTTCTGTTCTGAGCGTATTGCTAAATACGCGTTCGAGTATGCTTACCTGAACAACAGAAAGCAAGTGACTGCTGTCCACAAAGCAAATATAATGAAGCTTGCGGATGGTTTGTTCTTGGAATCTTGTCGAGAGGTTGCCACCAAGTATCCTGGAATTAAATACAACGAAATTATTGTGGACAATTGTTGCATGCAGCTTGTTTCAAAGCCCGAGCAGTTTGATGTCATGGTATGTAAAATTTATCCATTTTTCTTTAATCTATGATGGAGTAAAGTAAACACATACCATCTCTTTTGTTTGGCAAGGTTTTTAACTTTGTACTATTATATTATTCGTGATAAAAACAACTCCTCACTCGTATTATGAGTCCATTTGCATTTCCGTTTTTTCATGAACTGTTTGTGGTGCTTGAGAAAACACTTTTCTTACTGACAATTAATGACTTCTACTATCAATATCAACTTAGAAACGAGTCATGGCTGACAGCAAGACTAAGAGAAACAAGAGCTGAGTTGCTCGTATAGATCATGATTCCTTTTTTGCTATTGGTTTTTCACTGCTGGTTCAGTCAAAGGTTGGGAACATGGGAAAAAGGAAAAAAAGATTATCTCCTAAGCACATTATCCTGGAAATTAAGAAATATTAGAATTTATGACAAAGAAACTACGCATAAACATCACCAGAAACATTTATAAAATTGAGAGTCTGAATGTTATGTTCCAACAGCATCTGATAATTGTTAACATGGACCAAATAACAGTTCTTCTCAGCCTTTCTCTGCCTCCATTTGACCTACCCTGAATCTTTTCTACTCTCTATACTATGACATCCACATTCTCCTTTACACATGCCCAAACCATGTAAGTTGAGATCAAAGTCAAACCCTTCTGTGACATGGATAAACAAGGTTTGAATGTCTAGGAAATATATTTACTTATTTCCCTTGTTCATTCATGTGTAGATAGATAAAGTTATGATTTGTGATTCAGAATAGTGTAGTAGTCTTCAACCTTTAACGTATCTTAGGATGTAGAAGTTTAGAGGGAAGGGAGGGGAATTTTCCCTTTCTTTCTGTTTGAAAAGGAGAGGAATAAAATGATCGATCGCCACTTAACTTTATAAATTCACTTTCATTTTTAAAAACATTATATCACTCCAAAGTTTTTAAACATTAACCTTCAATCCCTTTCTCCCCTAACTTATCCATCCAAAGAACAACCCTGGAGGATGTAGATGTACTTTGTGGAATATTGAAGGGACAAGTAAATTTTTCTTTTCTTTTCTATTGATCTAAGCAAGAATCATTGCTGTGGGTTGGTTATCAACCTTAGGTCCAGATGATTTTGTCTTGCAACTCACTGGTTTTCACAATTTGTTTCTGATTTTTAGTTGAATAAAAGTAGCTTTGATATTCATGCATACTTTTACCTTGTGCTAGGTTACCCCAAATCTGTATGGAAATCTAGTTGCAAATACTGCGGCAGGCATTGCTGGAGGCACTGGAGTCATGCCAGGAGGTATAGTTTTTAGTTACTACTGTATTGCAACCTTAGAGCTTTGATCTGATTATGTTTCCTTTTAAATACCTTCTTGCCTACTTTTACCACGTTATCTGATGTGTGAATAATGTTCTAAACTTGATGGACTAGGCACATATGTTATGTGCTTGTCTAGATGATTGTTTTGGAGAACACTTTTATTTATCGAAAAACTTTGCAAATAAACACTACATTAAATTTGTCTGTTTGATCATATCATCAAGCTAGAATATCATTAACTACATTAACATCTGGAAGTATCATAGATGACTGCCTCTGTTGACTCACTGTCTAGGTAATGCAGCAATTAATGATGTTAGTGAAAACAAATGTTTCTGTATTCATATTAGTGAAATGTGTGCAAATGGACCCAAACAATTCAAAAAATTCAAGGTTTAAATCTGACCTGTTGTCTATCATAGGCTTTCTTTTAGGTTGGCCCTAACCTTTTTGAAAACCTGGTATAAATTGTTTAGTCTACTTAAAGACCTATTTCATATTAATGTCTTTAAATAAATTATCCAACCTATATTTAATTAGTCTAACAGACTAATATGCAATGGGTTAGGTTCTCTTTATAATAAGAAGATAAAATTAAAACCAGTCATGCTGAGACGTGAACATGATACAGAAGTAGAAATAGACAGAAGTAGAAATAAATGGGACAAACTGAGTTTTATAAGTCAGGTTCTGATTTGTTTGTTTGTATAATTTTTTTTGAGGTCTTTCATGGCATTTTAAAGAATTTGACCTAATATGATAACCTGTTTAAATTTTATTTTACAGTAAGACATTTAAATATGCCAAAAATTTGTGAAGGTAGTAGTATGGATCAATTATTGAAAATGTTACAAACATATAATCTAACACATTGTACAAATTTCAATATAATAATAACTATAATAGAAATAAAAAGTTATTATTTATACTTACTTAACTATGTTGATATGTTAGACCTAAATTTTGTTGTTGTGGCATGAAGCATGACCTATTTACCTAAATACACTACTAAAAAGCCTCAACTCTGTCTACATAATAAAATGTCTGATTGTCTTGGGCAAACTAGACTAGGCCATAGGCCTCTGTCAGACAACCCGACATATTTCTACCCTTAAATGGAGGTATTAGTGGCTATGTGAAATATGAATATGATGGTGGTGGTGGTGAAAGTACTAATGGTAGGTTGGAGCTGGTTGTTGGGTTTAGGGCTTCTGGGTAGAAGTTATATTATTCAGAAACATGATTCTCTGTTGTCACATTATAGCCTGATAATCACAAACACAAACCATTTGTGCCTTTTTTGCAGGTAATGTTGGTGCTGAGCATGCTGTGTTTGAGCAGGGTGCTTCAGCAGGAAATGTTGGTAATGAGAAAGTAGCTGCACAAAAGACAGCTAATCCAGTGGCGCTTCTTCTCTCATCAGCTATGATGCTTAGGCATCTCCAGTTTCCTGCATTTGCTGACCGTTTGGAAAACGCTGTTGAAAAAGTCATTCTAGAGGGCAAGTATCGGACAAAGGATCTTGGAGGGACAAGTACCACCCAAGAAGTTGTCGATGCAGTAATAGATGCTTTAGATTGA

Protein sequence

>MS.gene23789.t1

MATRRSIPLLKHLLSTRSQSEPFTISKRCVTYMHRPGDGTPRPVTLIPGDGIGPLVTGAVEQLMEAMHAPVYFEKFDVHGDMKAVPTEVLESIRKNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKQVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGNEKVAAQKTANPVALLLSSAMMLRHLQFPAFADRLENAVEKVILEGKYRTKDLGGTSTTQEVVDAVIDALD