Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03964.t1 | XP_013460286.1 | 98 | 586 | 1 | 1 | 1 | 575 | 1 | 586 | 0.00E+00 | 1188.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03964.t1 | P19251 | 93.2 | 586 | 29 | 1 | 1 | 575 | 1 | 586 | 0.0e+00 | 1137.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03964.t1 | A0A072UXM4 | 98.0 | 586 | 1 | 1 | 1 | 575 | 1 | 586 | 0.0e+00 | 1188.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene03964 | MS.gene41176 | PPI |
| MS.gene045117 | MS.gene03964 | PPI |
| MS.gene31156 | MS.gene03964 | PPI |
| MS.gene052207 | MS.gene03964 | PPI |
| MS.gene052122 | MS.gene03964 | PPI |
| MS.gene45489 | MS.gene03964 | PPI |
| MS.gene30955 | MS.gene03964 | PPI |
| MS.gene75475 | MS.gene03964 | PPI |
| MS.gene021114 | MS.gene03964 | PPI |
| MS.gene004045 | MS.gene03964 | PPI |
| MS.gene071169 | MS.gene03964 | PPI |
| MS.gene79217 | MS.gene03964 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03964.t1 | MTR_3g464580 | 97.952 | 586 | 1 | 1 | 1 | 575 | 1 | 586 | 0.0 | 1194 |
| MS.gene03964.t1 | MTR_3g464580 | 97.642 | 509 | 1 | 1 | 1 | 498 | 1 | 509 | 0.0 | 1037 |
| MS.gene03964.t1 | MTR_5g071360 | 84.300 | 586 | 79 | 3 | 1 | 575 | 1 | 584 | 0.0 | 1028 |
| MS.gene03964.t1 | MTR_5g071360 | 85.519 | 511 | 62 | 2 | 1 | 500 | 1 | 510 | 0.0 | 919 |
| MS.gene03964.t1 | MTR_3g464580 | 96.231 | 451 | 5 | 2 | 1 | 440 | 1 | 450 | 0.0 | 899 |
| MS.gene03964.t1 | MTR_3g087220 | 74.107 | 560 | 133 | 2 | 1 | 549 | 1 | 559 | 0.0 | 889 |
| MS.gene03964.t1 | MTR_5g069310 | 76.224 | 143 | 33 | 1 | 433 | 575 | 2 | 143 | 2.63e-70 | 223 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03964.t1 | AT3G47340 | 80.409 | 587 | 100 | 4 | 1 | 575 | 1 | 584 | 0.0 | 994 |
| MS.gene03964.t1 | AT5G10240 | 77.477 | 555 | 113 | 2 | 1 | 544 | 1 | 554 | 0.0 | 920 |
| MS.gene03964.t1 | AT5G65010 | 77.314 | 551 | 113 | 2 | 1 | 540 | 1 | 550 | 0.0 | 915 |
| MS.gene03964.t1 | AT5G65010 | 77.355 | 552 | 112 | 3 | 1 | 540 | 1 | 551 | 0.0 | 912 |
| MS.gene03964.t1 | AT5G10240 | 76.937 | 555 | 115 | 3 | 1 | 544 | 1 | 553 | 0.0 | 910 |
| MS.gene03964.t1 | AT3G47340 | 82.711 | 509 | 76 | 2 | 1 | 498 | 1 | 508 | 0.0 | 899 |
| MS.gene03964.t1 | AT3G47340 | 82.057 | 418 | 63 | 2 | 1 | 407 | 1 | 417 | 0.0 | 737 |
| MS.gene03964.t1 | AT3G47340 | 83.498 | 303 | 49 | 1 | 105 | 407 | 1 | 302 | 0.0 | 547 |
Find 134 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGCATATGTTGATTTAT+TGG | 0.113242 | 3.2:+55060861 | None:intergenic |
| CTTCTTTGTTTGGTGCCTTA+TGG | 0.206839 | 3.2:+55061049 | None:intergenic |
| TGAATTTCAGTTTACTATTC+AGG | 0.209606 | 3.2:-55062076 | MS.gene03964:intron |
| TGGATTGCATCAGAATTAAA+AGG | 0.220309 | 3.2:-55062753 | MS.gene03964:CDS |
| GGAGTCAAATGGGTGATTTC+TGG | 0.221522 | 3.2:-55061111 | MS.gene03964:CDS |
| CATATGATGTAACTACAATT+AGG | 0.241861 | 3.2:-55061179 | MS.gene03964:CDS |
| TCTATAGTAATATGCTTCTT+TGG | 0.249070 | 3.2:+55060257 | None:intergenic |
| GCCATTGTTGATCCTGCTTC+TGG | 0.252119 | 3.2:-55063354 | MS.gene03964:CDS |
| CACTTCCTTGTACATTGGTT+GGG | 0.257852 | 3.2:-55062886 | MS.gene03964:CDS |
| AGATTAGAAATTTCCATCTT+TGG | 0.261394 | 3.2:+55059862 | None:intergenic |
| CTTCTCTGGCTCTACAGTTT+TGG | 0.272062 | 3.2:+55059891 | None:intergenic |
| CCAACATGGTGATAACTATT+TGG | 0.283627 | 3.2:-55063391 | MS.gene03964:CDS |
| TTACCTTGCGGCATGTTTCT+TGG | 0.286349 | 3.2:+55061019 | None:intergenic |
| TGGTTGGATTGATGGTATTA+AGG | 0.289578 | 3.2:-55060449 | MS.gene03964:CDS |
| CTATTGAGTGGGATGCTTCT+TGG | 0.291336 | 3.2:-55059993 | MS.gene03964:CDS |
| AAGATGGAAATTTCTAATCT+TGG | 0.303255 | 3.2:-55059859 | MS.gene03964:CDS |
| TCAAGCAACCTTGATCCTTC+TGG | 0.306690 | 3.2:-55059970 | MS.gene03964:CDS |
| GATTACAGGCTGTGATAAAA+AGG | 0.326265 | 3.2:-55062432 | MS.gene03964:intron |
| TGGTGAAACTCTTCTTTGTT+TGG | 0.329318 | 3.2:+55061039 | None:intergenic |
| TTATGTTAGTATGAGGAGTA+TGG | 0.338204 | 3.2:-55063005 | MS.gene03964:intron |
| CTACTTCTCTTCCAGCCTTA+AGG | 0.348738 | 3.2:+55062124 | None:intergenic |
| TCGGCAAGACTAACGGTTCC+TGG | 0.359524 | 3.2:-55060048 | MS.gene03964:CDS |
| TGGAGGTTTGGATTCTTCAT+TGG | 0.369269 | 3.2:-55062374 | MS.gene03964:CDS |
| ATCTTTGGTATAATCTTCTC+TGG | 0.371278 | 3.2:+55059877 | None:intergenic |
| TTGTTATTGTAGGTTCTGTT+TGG | 0.373539 | 3.2:-55062773 | MS.gene03964:intron |
| GTTGGCTATGGTTGGATTGA+TGG | 0.373548 | 3.2:-55060457 | MS.gene03964:CDS |
| CATTGATCCTGAGTACAAAA+TGG | 0.374006 | 3.2:-55060782 | MS.gene03964:intron |
| CTCATTCTGTGTAGGACTTA+AGG | 0.378447 | 3.2:-55062284 | MS.gene03964:intron |
| TTGTTGCGAGGGATGCTATA+GGG | 0.380417 | 3.2:-55062911 | MS.gene03964:CDS |
| TATCATAAAATTCAGGTGAA+TGG | 0.381079 | 3.2:-55063209 | MS.gene03964:intron |
| TACATTGGTTGGGGACTAGA+TGG | 0.386232 | 3.2:-55062876 | MS.gene03964:intron |
| GAAGGATCTGACGAGATTCT+TGG | 0.394533 | 3.2:-55061087 | MS.gene03964:CDS |
| CTCAAAACTAGAGGATCATA+AGG | 0.403123 | 3.2:+55062606 | None:intergenic |
| CCTTCTGGAAGAGCAGCATT+TGG | 0.406608 | 3.2:-55059955 | MS.gene03964:CDS |
| TCACTTCCTTGTACATTGGT+TGG | 0.408558 | 3.2:-55062887 | MS.gene03964:CDS |
| TGTGTACGGAATTTGTGATT+AGG | 0.411870 | 3.2:+55063149 | None:intergenic |
| CACAAAAGCTGCTAAACAAT+GGG | 0.413052 | 3.2:-55062320 | MS.gene03964:CDS |
| TCAAATCATCAGGAGTCAAA+TGG | 0.416775 | 3.2:-55061122 | MS.gene03964:CDS |
| TTAGGGTGCACCTGACCTTA+AGG | 0.420678 | 3.2:-55062139 | MS.gene03964:intron |
| ATATGATGTAACTACAATTA+GGG | 0.426432 | 3.2:-55061178 | MS.gene03964:CDS |
| AGAGAAGATTATACCAAAGA+TGG | 0.434916 | 3.2:-55059875 | MS.gene03964:CDS |
| TGCAGATCAAAGCTCTTCAT+AGG | 0.436093 | 3.2:-55060900 | MS.gene03964:intron |
| TGGTGGAGCCCACTCCAATC+TGG | 0.436866 | 3.2:+55063411 | None:intergenic |
| AAGAAGGAAGAATTGAGAAA+TGG | 0.439977 | 3.2:-55060663 | MS.gene03964:CDS |
| AGGGTATTTGTATTTCCATA+AGG | 0.443024 | 3.2:-55061064 | MS.gene03964:CDS |
| AGAGGATCATAAGGGGTTGT+TGG | 0.444662 | 3.2:+55062615 | None:intergenic |
| TGTGGTATACTTGCTGTACT+TGG | 0.453089 | 3.2:-55064478 | MS.gene03964:CDS |
| TTGAGTACCTTAGGAAGGTA+AGG | 0.458332 | 3.2:+55060607 | None:intergenic |
| GGGGTCACTTCCTTGTACAT+TGG | 0.460121 | 3.2:-55062891 | MS.gene03964:CDS |
| TCAAAACTAGAGGATCATAA+GGG | 0.460214 | 3.2:+55062607 | None:intergenic |
| TGTCTCATATTAGCTTTGAA+TGG | 0.461591 | 3.2:+55059831 | None:intergenic |
| ATTGTTGCGAGGGATGCTAT+AGG | 0.464075 | 3.2:-55062912 | MS.gene03964:CDS |
| TCTCTTCCAGCCTTAAGGTC+AGG | 0.474929 | 3.2:+55062129 | None:intergenic |
| ACTTCCTTGTACATTGGTTG+GGG | 0.475172 | 3.2:-55062885 | MS.gene03964:CDS |
| GAATTGAGAAATGGATACTA+AGG | 0.475694 | 3.2:-55060654 | MS.gene03964:CDS |
| TAATATGCTTCTTTGGTAAG+TGG | 0.476674 | 3.2:+55060264 | None:intergenic |
| TCTCGAAAGATCAAATCATC+AGG | 0.483191 | 3.2:-55061132 | MS.gene03964:CDS |
| CTGTGATGTTATTGCACACC+TGG | 0.486927 | 3.2:-55063120 | MS.gene03964:intron |
| GTTCAGATAAAACATGAAGA+AGG | 0.491067 | 3.2:-55060679 | MS.gene03964:intron |
| TGAAGCACCGTGGTCCAGAT+TGG | 0.494451 | 3.2:-55063425 | MS.gene03964:intron |
| CAAATCATCAGGAGTCAAAT+GGG | 0.497991 | 3.2:-55061121 | MS.gene03964:CDS |
| TTGGTAAGTGGAGTGTTGAA+AGG | 0.504831 | 3.2:+55060276 | None:intergenic |
| CTGCTCTTCCAGAAGGATCA+AGG | 0.507380 | 3.2:+55059962 | None:intergenic |
| CAATAAATCAACATATGCAT+GGG | 0.509465 | 3.2:-55060860 | MS.gene03964:CDS |
| AAGACCGGGAGTTTCGTAGA+TGG | 0.513657 | 3.2:-55062671 | MS.gene03964:CDS |
| GGATTGCATCAGAATTAAAA+GGG | 0.514030 | 3.2:-55062752 | MS.gene03964:CDS |
| GTGATGGAGTTGGCTATGGT+TGG | 0.516816 | 3.2:-55060465 | MS.gene03964:CDS |
| CTGATGACTCACAAGCTAAG+AGG | 0.518775 | 3.2:-55064450 | MS.gene03964:CDS |
| TCTACAATCATGAAGACCTC+AGG | 0.520006 | 3.2:-55063181 | MS.gene03964:CDS |
| TTCAGTGATGGAGTTGGCTA+TGG | 0.523214 | 3.2:-55060469 | MS.gene03964:CDS |
| ATAACTATTTGGCTCATCAA+AGG | 0.530780 | 3.2:-55063380 | MS.gene03964:CDS |
| AGAGGTTGATCACCAGAAGC+AGG | 0.531123 | 3.2:+55063342 | None:intergenic |
| ACTTGTACTCGAGCAAAGAC+CGG | 0.535273 | 3.2:-55062686 | MS.gene03964:CDS |
| CTTGTACTCGAGCAAAGACC+GGG | 0.536345 | 3.2:-55062685 | MS.gene03964:CDS |
| CAACAGTTTCATTGTTGCGA+GGG | 0.541209 | 3.2:-55062922 | MS.gene03964:CDS |
| GGTGCACCTGACCTTAAGGC+TGG | 0.541650 | 3.2:-55062135 | MS.gene03964:CDS |
| TAGTAAACTGAAATTCATGA+TGG | 0.544517 | 3.2:+55062082 | None:intergenic |
| AATAGTTATCACCATGTTGG+TGG | 0.545301 | 3.2:+55063394 | None:intergenic |
| GCACAAAAGCTGCTAAACAA+TGG | 0.546035 | 3.2:-55062321 | MS.gene03964:CDS |
| CTATTTGGCTCATCAAAGGT+TGG | 0.547801 | 3.2:-55063376 | MS.gene03964:CDS |
| CCAATAAATCAACATATGCA+TGG | 0.548770 | 3.2:-55060861 | MS.gene03964:CDS |
| AGCAGTTACTGCTAGATACC+TGG | 0.549460 | 3.2:-55062347 | MS.gene03964:CDS |
| AAATGGGTGATTTCTGGAGA+AGG | 0.550290 | 3.2:-55061105 | MS.gene03964:CDS |
| GGATCTGACGAGATTCTTGG+AGG | 0.551307 | 3.2:-55061084 | MS.gene03964:CDS |
| CAGAAGGAACAGTTCAGTGA+TGG | 0.554559 | 3.2:-55060481 | MS.gene03964:CDS |
| CCAAATGCTGCTCTTCCAGA+AGG | 0.561506 | 3.2:+55059955 | None:intergenic |
| AAATTACACTCATTCTGTGT+AGG | 0.565107 | 3.2:-55062292 | MS.gene03964:CDS |
| GGATTTCATCAAAGTTGCAA+TGG | 0.568271 | 3.2:-55060806 | MS.gene03964:CDS |
| AGAGAATCCTTACCTTCCTA+AGG | 0.568467 | 3.2:-55060614 | MS.gene03964:intron |
| TTTCGAGACATCAGAAACAT+AGG | 0.569570 | 3.2:+55061147 | None:intergenic |
| TTTGAGGAACGCCTTTGAGA+AGG | 0.571044 | 3.2:-55062589 | MS.gene03964:intron |
| TGTGAATCTTACCTTCTCAA+AGG | 0.571655 | 3.2:+55062578 | None:intergenic |
| CATCACAGTCACATTGTGTA+CGG | 0.573999 | 3.2:+55063135 | None:intergenic |
| TGATGACTCACAAGCTAAGA+GGG | 0.575223 | 3.2:-55064449 | MS.gene03964:intron |
| TGTTGCGAGGGATGCTATAG+GGG | 0.583881 | 3.2:-55062910 | MS.gene03964:CDS |
| ACCGTGGTCCAGATTGGAGT+GGG | 0.584195 | 3.2:-55063419 | MS.gene03964:CDS |
| ACTATAGAATGATCTTTGAG+AGG | 0.584236 | 3.2:-55060242 | MS.gene03964:CDS |
| GTAGAACTCGGCAAGACTAA+CGG | 0.589213 | 3.2:-55060055 | MS.gene03964:intron |
| CATGCAACACTAGCTCCTCC+AGG | 0.589828 | 3.2:+55060030 | None:intergenic |
| GAACAGTTCAGTGATGGAGT+TGG | 0.592459 | 3.2:-55060475 | MS.gene03964:CDS |
| TTGATGACTGATGTGCCGTT+CGG | 0.596910 | 3.2:-55062409 | MS.gene03964:CDS |
| TAGAGTTGAGTACCTTAGGA+AGG | 0.599420 | 3.2:+55060602 | None:intergenic |
| CCAAATAGTTATCACCATGT+TGG | 0.601085 | 3.2:+55063391 | None:intergenic |
| GGATGGCATAGATGCAATTG+AGG | 0.606055 | 3.2:-55061223 | MS.gene03964:CDS |
| GTAGATGGTACAATCCTCCA+TGG | 0.607175 | 3.2:-55062656 | MS.gene03964:CDS |
| TAGTCCCCAACCAATGTACA+AGG | 0.608478 | 3.2:+55062881 | None:intergenic |
| CACAGAGAAAGCTATTGAGT+GGG | 0.608617 | 3.2:-55060004 | MS.gene03964:CDS |
| GCACAGAGAAAGCTATTGAG+TGG | 0.609213 | 3.2:-55060005 | MS.gene03964:CDS |
| GATTTGTCTTCATTGAAGAG+AGG | 0.610358 | 3.2:+55063324 | None:intergenic |
| AGACAAATCTATTATTGTCA+CGG | 0.614131 | 3.2:-55063310 | MS.gene03964:intron |
| TGTACCATCTACGAAACTCC+CGG | 0.614554 | 3.2:+55062667 | None:intergenic |
| GATTAGGCAATTGTTTCCTG+AGG | 0.616657 | 3.2:+55063165 | None:intergenic |
| TGAGAAATGGATACTAAGGA+AGG | 0.617704 | 3.2:-55060650 | MS.gene03964:CDS |
| TCTTTGATCATCACAATGTG+TGG | 0.626178 | 3.2:-55064496 | None:intergenic |
| TGGAGTGGGCTCCACCAACA+TGG | 0.631779 | 3.2:-55063405 | MS.gene03964:CDS |
| GATCTGACGAGATTCTTGGA+GGG | 0.634405 | 3.2:-55061083 | MS.gene03964:CDS |
| AAGGCGTTCCTCAAAACTAG+AGG | 0.639779 | 3.2:+55062597 | None:intergenic |
| ACAACAGTTTCATTGTTGCG+AGG | 0.640177 | 3.2:-55062923 | MS.gene03964:CDS |
| CACCGTGGTCCAGATTGGAG+TGG | 0.641426 | 3.2:-55063420 | MS.gene03964:CDS |
| TTGCTCGAGTACAAGTGACC+AGG | 0.642279 | 3.2:+55062693 | None:intergenic |
| CCAGATAGTAAAACACCGAA+CGG | 0.643802 | 3.2:+55062394 | None:intergenic |
| CTCGAGTACAAGTGACCAGG+TGG | 0.647322 | 3.2:+55062696 | None:intergenic |
| GCCCACTCCAATCTGGACCA+CGG | 0.649014 | 3.2:+55063418 | None:intergenic |
| ATAATAGCCTCATTGAACCA+TGG | 0.651148 | 3.2:+55062639 | None:intergenic |
| TCACCAAGAAACATGCCGCA+AGG | 0.655836 | 3.2:-55061022 | MS.gene03964:intron |
| CAAAACTAGAGGATCATAAG+GGG | 0.656036 | 3.2:+55062608 | None:intergenic |
| ACCAGAAGCAGGATCAACAA+TGG | 0.662855 | 3.2:+55063353 | None:intergenic |
| GTTACTGCTAGATACCTGGC+TGG | 0.663073 | 3.2:-55062343 | MS.gene03964:CDS |
| CAATCCTCCATGGTTCAATG+AGG | 0.664816 | 3.2:-55062646 | MS.gene03964:CDS |
| AATAAATCAACATATGCATG+GGG | 0.691237 | 3.2:-55060859 | MS.gene03964:CDS |
| GCAAGACTAACGGTTCCTGG+AGG | 0.731795 | 3.2:-55060045 | MS.gene03964:CDS |
| ACAAAAGCTGCTAAACAATG+GGG | 0.732585 | 3.2:-55062319 | MS.gene03964:CDS |
| ATAGCCTCATTGAACCATGG+AGG | 0.754515 | 3.2:+55062642 | None:intergenic |
| TGTCACAGATTGAAGCACCG+TGG | 0.798262 | 3.2:-55063435 | MS.gene03964:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATAAAAAAACTCT+TGG | + | chr3.2:55060073-55060092 | None:intergenic | 10.0% |
| !! | AATACTAATTAATACATATA+TGG | - | chr3.2:55060262-55060281 | MS.gene03964:CDS | 10.0% |
| !! | ATATAATTATCCATTTATAT+TGG | - | chr3.2:55060481-55060500 | MS.gene03964:CDS | 10.0% |
| !! | TACTTATTAATTATTCTAAT+TGG | + | chr3.2:55060808-55060827 | None:intergenic | 10.0% |
| !! | TATAATTATCCATTTATATT+GGG | - | chr3.2:55060482-55060501 | MS.gene03964:CDS | 10.0% |
| !! | TATATGGATATAATATAATA+TGG | - | chr3.2:55060278-55060297 | MS.gene03964:CDS | 10.0% |
| !!! | ACATTTTTTATACTATAAAA+TGG | - | chr3.2:55061072-55061091 | MS.gene03964:CDS | 10.0% |
| !!! | TAAATTTTATCATAAAATTC+AGG | - | chr3.2:55061105-55061124 | MS.gene03964:CDS | 10.0% |
| !!! | TATAATTCTCTTTAAAATAT+TGG | + | chr3.2:55060447-55060466 | None:intergenic | 10.0% |
| !!! | TTTTATAATTTCATACTTTT+TGG | - | chr3.2:55062799-55062818 | MS.gene03964:intron | 10.0% |
| !!! | TTTTTTATTTTTGTATTTTG+TGG | - | chr3.2:55060090-55060109 | MS.gene03964:intron | 10.0% |
| !! | AACTATAGAATATTATTACA+AGG | + | chr3.2:55061048-55061067 | None:intergenic | 15.0% |
| !! | ATGAAAAAAAAATTCATTCA+AGG | - | chr3.2:55062121-55062140 | MS.gene03964:CDS | 15.0% |
| !! | CAAATTAAATTTGCAAATTA+TGG | + | chr3.2:55063770-55063789 | None:intergenic | 15.0% |
| !! | CTTCAAAAAAAAATATCATA+GGG | - | chr3.2:55063019-55063038 | MS.gene03964:intron | 15.0% |
| !! | GAATAATTAATAAGTAACTT+TGG | - | chr3.2:55060812-55060831 | MS.gene03964:CDS | 15.0% |
| !! | TCTTCAAAAAAAAATATCAT+AGG | - | chr3.2:55063018-55063037 | MS.gene03964:intron | 15.0% |
| !! | TTCAAAAAAAAATATCATAG+GGG | - | chr3.2:55063020-55063039 | MS.gene03964:intron | 15.0% |
| !!! | AAAATATTTTGGTTTTAAGA+GGG | - | chr3.2:55060209-55060228 | MS.gene03964:intron | 15.0% |
| !!! | AGGGTATTTATTTATATAAA+AGG | + | chr3.2:55059974-55059993 | None:intergenic | 15.0% |
| !!! | CAAGTTTTAAAAAATAAGAA+TGG | + | chr3.2:55060139-55060158 | None:intergenic | 15.0% |
| !!! | GGTTTTTTATTTTTTTCAAA+TGG | + | chr3.2:55060422-55060441 | None:intergenic | 15.0% |
| !!! | TATATAAATAAATACCCTTT+TGG | - | chr3.2:55059976-55059995 | MS.gene03964:CDS | 15.0% |
| !!! | TTATTTTTTAAAACTTGACA+TGG | - | chr3.2:55060142-55060161 | MS.gene03964:intron | 15.0% |
| !!! | TTATTTTTTATGTTAGTATG+AGG | - | chr3.2:55061309-55061328 | MS.gene03964:intron | 15.0% |
| !!! | TTTATTTTAATAAATCACGT+GGG | - | chr3.2:55060750-55060769 | MS.gene03964:intron | 15.0% |
| !!! | TTTTATTTTAATAAATCACG+TGG | - | chr3.2:55060749-55060768 | MS.gene03964:intron | 15.0% |
| !! | AAAATAAAAATTCCACATGT+AGG | + | chr3.2:55060738-55060757 | None:intergenic | 20.0% |
| !! | AATAAACAAAAGTAAGACAT+GGG | - | chr3.2:55060631-55060650 | MS.gene03964:CDS | 20.0% |
| !! | ATATGATGTAACTACAATTA+GGG | - | chr3.2:55063143-55063162 | MS.gene03964:CDS | 20.0% |
| !! | CAACAAAAGTAAAATGAAAT+TGG | + | chr3.2:55063941-55063960 | None:intergenic | 20.0% |
| !! | CATCTATTCTAAATTATGAT+TGG | - | chr3.2:55062064-55062083 | MS.gene03964:intron | 20.0% |
| !! | TAGTTATATTTAGTCTAACT+CGG | + | chr3.2:55061852-55061871 | None:intergenic | 20.0% |
| !! | TCAAAAAAAAATATCATAGG+GGG | - | chr3.2:55063021-55063040 | MS.gene03964:intron | 20.0% |
| !! | TCAAAATTGCAAAAATATGT+GGG | - | chr3.2:55062300-55062319 | MS.gene03964:CDS | 20.0% |
| !!! | AATGGAAGTTCAAAATATTT+TGG | - | chr3.2:55060198-55060217 | MS.gene03964:intron | 20.0% |
| !!! | ATTCTCTTTAAAATATTGGA+TGG | + | chr3.2:55060443-55060462 | None:intergenic | 20.0% |
| !!! | CAAAATATTTTGGTTTTAAG+AGG | - | chr3.2:55060208-55060227 | MS.gene03964:intron | 20.0% |
| !!! | GAGTTTTTATTATATTGATG+AGG | - | chr3.2:55060164-55060183 | MS.gene03964:intron | 20.0% |
| !!! | TATAATTTCATACTTTTTGG+TGG | - | chr3.2:55062802-55062821 | MS.gene03964:intron | 20.0% |
| !!! | TATTCATGTTATGTTGATTA+GGG | - | chr3.2:55062165-55062184 | MS.gene03964:intron | 20.0% |
| !!! | TCTTTGTAAATATTTTGAGA+CGG | - | chr3.2:55062911-55062930 | MS.gene03964:CDS | 20.0% |
| !!! | TGTTATTTTGATGCAATAAT+TGG | - | chr3.2:55060661-55060680 | MS.gene03964:CDS | 20.0% |
| !!! | TTATTCATGTTATGTTGATT+AGG | - | chr3.2:55062164-55062183 | MS.gene03964:intron | 20.0% |
| !!! | TTCTTGAAATTTTTTCGTAT+AGG | - | chr3.2:55063984-55064003 | MS.gene03964:intron | 20.0% |
| !!! | TTTTTCAAATGGCAAAATAT+TGG | + | chr3.2:55060411-55060430 | None:intergenic | 20.0% |
| !!! | TTTTTTTGAAGACATCAAAA+TGG | + | chr3.2:55063010-55063029 | None:intergenic | 20.0% |
| ! | AAGATGGAAATTTCTAATCT+TGG | - | chr3.2:55064462-55064481 | MS.gene03964:CDS | 25.0% |
| ! | AATAAATCAACATATGCATG+GGG | - | chr3.2:55063462-55063481 | MS.gene03964:intron | 25.0% |
| ! | ACCAAAATCAATAACATTCA+TGG | + | chr3.2:55061290-55061309 | None:intergenic | 25.0% |
| ! | AGACAAATCTATTATTGTCA+CGG | - | chr3.2:55061011-55061030 | MS.gene03964:intron | 25.0% |
| ! | AGATTAGAAATTTCCATCTT+TGG | + | chr3.2:55064462-55064481 | None:intergenic | 25.0% |
| ! | ATAAACAAAAGTAAGACATG+GGG | - | chr3.2:55060632-55060651 | MS.gene03964:CDS | 25.0% |
| ! | ATGACACACATTACATAATT+TGG | - | chr3.2:55060588-55060607 | MS.gene03964:intron | 25.0% |
| ! | ATTTGATTAGGCCTTTATTA+AGG | + | chr3.2:55064230-55064249 | None:intergenic | 25.0% |
| ! | CAATAAATCAACATATGCAT+GGG | - | chr3.2:55063461-55063480 | MS.gene03964:intron | 25.0% |
| ! | CATATGATGTAACTACAATT+AGG | - | chr3.2:55063142-55063161 | MS.gene03964:CDS | 25.0% |
| ! | CTCAAAATTGCAAAAATATG+TGG | - | chr3.2:55062299-55062318 | MS.gene03964:CDS | 25.0% |
| ! | GAATAAACAAAAGTAAGACA+TGG | - | chr3.2:55060630-55060649 | MS.gene03964:CDS | 25.0% |
| ! | GATAAGTGATATACAACTAA+AGG | - | chr3.2:55060326-55060345 | MS.gene03964:intron | 25.0% |
| ! | TAGAAAAATCACCAAAATGA+TGG | - | chr3.2:55060353-55060372 | MS.gene03964:intron | 25.0% |
| ! | TAGTAAACTGAAATTCATGA+TGG | + | chr3.2:55062242-55062261 | None:intergenic | 25.0% |
| ! | TATCATAAAATTCAGGTGAA+TGG | - | chr3.2:55061112-55061131 | MS.gene03964:CDS | 25.0% |
| ! | TATTGCATCAAAATAACATG+TGG | + | chr3.2:55060659-55060678 | None:intergenic | 25.0% |
| ! | TCAAAATTGCAAAAAAGTTG+CGG | - | chr3.2:55062431-55062450 | MS.gene03964:intron | 25.0% |
| ! | TCTATAGTAATATGCTTCTT+TGG | + | chr3.2:55064067-55064086 | None:intergenic | 25.0% |
| ! | TGAAATTGGAAAGAAAATGT+TGG | + | chr3.2:55063927-55063946 | None:intergenic | 25.0% |
| ! | TGAATTTCAGTTTACTATTC+AGG | - | chr3.2:55062245-55062264 | MS.gene03964:intron | 25.0% |
| ! | TGACACACATTACATAATTT+GGG | - | chr3.2:55060589-55060608 | MS.gene03964:intron | 25.0% |
| ! | TTGGACTTTATGTATATGAA+CGG | + | chr3.2:55060789-55060808 | None:intergenic | 25.0% |
| !! | ATTTTTATAACAATGTCGCT+TGG | + | chr3.2:55064148-55064167 | None:intergenic | 25.0% |
| !! | GATTGGAAAAGAAATTTTAG+TGG | - | chr3.2:55062081-55062100 | MS.gene03964:CDS | 25.0% |
| !! | TGAATAATTTGTGACAAGTT+TGG | - | chr3.2:55061518-55061537 | MS.gene03964:intron | 25.0% |
| !! | TTTTGATGCAATAATTGGTT+CGG | - | chr3.2:55060666-55060685 | MS.gene03964:CDS | 25.0% |
| !!! | AAATTAATTTGTCCTACATG+TGG | - | chr3.2:55060723-55060742 | MS.gene03964:intron | 25.0% |
| !!! | ACCATGAATGTTATTGATTT+TGG | - | chr3.2:55061286-55061305 | MS.gene03964:intron | 25.0% |
| !!! | TCTTTTTCGTTGATTTTGTT+GGG | + | chr3.2:55060699-55060718 | None:intergenic | 25.0% |
| !!! | TTCATTTTACTTTTGTTGCA+AGG | - | chr3.2:55063943-55063962 | MS.gene03964:intron | 25.0% |
| !!! | TTTATTTTTGTGGTCTATGT+AGG | - | chr3.2:55063077-55063096 | MS.gene03964:intron | 25.0% |
| AAAAAAGTTGCGGTCTAATA+GGG | - | chr3.2:55062441-55062460 | MS.gene03964:intron | 30.0% | |
| AAACAAATTGACCAGAGATA+CGG | - | chr3.2:55061765-55061784 | MS.gene03964:intron | 30.0% | |
| AAACATACTTGACTTTGACA+AGG | - | chr3.2:55060556-55060575 | MS.gene03964:intron | 30.0% | |
| AAACATCAAAGTTAGCCAAA+AGG | + | chr3.2:55059994-55060013 | None:intergenic | 30.0% | |
| AAATTACACTCATTCTGTGT+AGG | - | chr3.2:55062029-55062048 | MS.gene03964:intron | 30.0% | |
| AACATCAAAGTTAGCCAAAA+GGG | + | chr3.2:55059993-55060012 | None:intergenic | 30.0% | |
| AAGAAGGAAGAATTGAGAAA+TGG | - | chr3.2:55063658-55063677 | MS.gene03964:intron | 30.0% | |
| ACAACTGAAAGATAAGCATT+GGG | + | chr3.2:55060509-55060528 | None:intergenic | 30.0% | |
| ACTATAGAATGATCTTTGAG+AGG | - | chr3.2:55064079-55064098 | MS.gene03964:intron | 30.0% | |
| AGAGAAGATTATACCAAAGA+TGG | - | chr3.2:55064446-55064465 | MS.gene03964:intron | 30.0% | |
| ATCTTTGGTATAATCTTCTC+TGG | + | chr3.2:55064447-55064466 | None:intergenic | 30.0% | |
| ATGAAATCCTTGTCCAAAAA+TGG | + | chr3.2:55063504-55063523 | None:intergenic | 30.0% | |
| CAAAAATATGTGGGCAAATA+GGG | - | chr3.2:55062309-55062328 | MS.gene03964:CDS | 30.0% | |
| CCAATAAATCAACATATGCA+TGG | - | chr3.2:55063460-55063479 | MS.gene03964:intron | 30.0% | |
| CTTGTAACTACTAGTAGTTT+AGG | - | chr3.2:55060531-55060550 | MS.gene03964:intron | 30.0% | |
| GAATTGAGAAATGGATACTA+AGG | - | chr3.2:55063667-55063686 | MS.gene03964:intron | 30.0% | |
| GCCTTTATTAAGGTTATGTT+GGG | + | chr3.2:55064220-55064239 | None:intergenic | 30.0% | |
| GGATTGCATCAGAATTAAAA+GGG | - | chr3.2:55061569-55061588 | MS.gene03964:intron | 30.0% | |
| GGTAAATAAGAGTTTGATCA+TGG | + | chr3.2:55060052-55060071 | None:intergenic | 30.0% | |
| GGTAATAGAACTACATTACA+TGG | - | chr3.2:55063320-55063339 | MS.gene03964:CDS | 30.0% | |
| GTTCAGATAAAACATGAAGA+AGG | - | chr3.2:55063642-55063661 | MS.gene03964:intron | 30.0% | |
| TAATATGCTTCTTTGGTAAG+TGG | + | chr3.2:55064060-55064079 | None:intergenic | 30.0% | |
| TACAACTGAAAGATAAGCAT+TGG | + | chr3.2:55060510-55060529 | None:intergenic | 30.0% | |
| TCAAAACTAGAGGATCATAA+GGG | + | chr3.2:55061717-55061736 | None:intergenic | 30.0% | |
| TCCCAACATAACCTTAATAA+AGG | - | chr3.2:55064216-55064235 | MS.gene03964:intron | 30.0% | |
| TGATTGATTAAGTTACCTGA+GGG | + | chr3.2:55064110-55064129 | None:intergenic | 30.0% | |
| TGGACTTTATGTATATGAAC+GGG | + | chr3.2:55060788-55060807 | None:intergenic | 30.0% | |
| TGGATTGCATCAGAATTAAA+AGG | - | chr3.2:55061568-55061587 | MS.gene03964:intron | 30.0% | |
| TTATGTTAGTATGAGGAGTA+TGG | - | chr3.2:55061316-55061335 | MS.gene03964:intron | 30.0% | |
| TTCATTCAAGGTTGTCTAAT+TGG | - | chr3.2:55062133-55062152 | MS.gene03964:CDS | 30.0% | |
| TTGATTGATTAAGTTACCTG+AGG | + | chr3.2:55064111-55064130 | None:intergenic | 30.0% | |
| ! | AATGTAGTTCTATTACCTTG+CGG | + | chr3.2:55063317-55063336 | None:intergenic | 30.0% |
| ! | AGAAAATTTTGTGGACATGT+TGG | - | chr3.2:55061339-55061358 | MS.gene03964:intron | 30.0% |
| ! | AGGGTATTTGTATTTCCATA+AGG | - | chr3.2:55063257-55063276 | MS.gene03964:intron | 30.0% |
| ! | ATAACTATTTGGCTCATCAA+AGG | - | chr3.2:55060941-55060960 | MS.gene03964:intron | 30.0% |
| ! | TATCATACCATTTTGTACTC+AGG | + | chr3.2:55063549-55063568 | None:intergenic | 30.0% |
| ! | TATCTTTTCATTTGTTCTGC+TGG | - | chr3.2:55061366-55061385 | MS.gene03964:intron | 30.0% |
| ! | TTGTTATTGTAGGTTCTGTT+TGG | - | chr3.2:55061548-55061567 | MS.gene03964:intron | 30.0% |
| !! | CCATGCATATGTTGATTTAT+TGG | + | chr3.2:55063463-55063482 | None:intergenic | 30.0% |
| !! | TCATACTTTTTGGTGGTTAA+AGG | - | chr3.2:55062809-55062828 | MS.gene03964:intron | 30.0% |
| !!! | CTCTTTTTCGTTGATTTTGT+TGG | + | chr3.2:55060700-55060719 | None:intergenic | 30.0% |
| AAAGTAGAGTTGAGTACCTT+AGG | + | chr3.2:55063726-55063745 | None:intergenic | 35.0% | |
| AATAATGCCTCGTTTGTACA+TGG | - | chr3.2:55062834-55062853 | MS.gene03964:intron | 35.0% | |
| AATAGTTATCACCATGTTGG+TGG | + | chr3.2:55060930-55060949 | None:intergenic | 35.0% | |
| ACAAAAGCTGCTAAACAATG+GGG | - | chr3.2:55062002-55062021 | MS.gene03964:intron | 35.0% | |
| ACGAAAAGTTGCTGTCAAAT+AGG | - | chr3.2:55062569-55062588 | MS.gene03964:intron | 35.0% | |
| ATAAATTCTGAGTGACACCA+AGG | + | chr3.2:55062508-55062527 | None:intergenic | 35.0% | |
| ATAATAGCCTCATTGAACCA+TGG | + | chr3.2:55061685-55061704 | None:intergenic | 35.0% | |
| ATAGTACAAGGTGTACTACA+TGG | + | chr3.2:55062958-55062977 | None:intergenic | 35.0% | |
| ATTACATGGCTCATGTTTGA+AGG | - | chr3.2:55063334-55063353 | MS.gene03964:CDS | 35.0% | |
| CAAAAAAGTTGCGGTCTAAT+AGG | - | chr3.2:55062440-55062459 | MS.gene03964:intron | 35.0% | |
| CAAAACTAGAGGATCATAAG+GGG | + | chr3.2:55061716-55061735 | None:intergenic | 35.0% | |
| CAAATCATCAGGAGTCAAAT+GGG | - | chr3.2:55063200-55063219 | MS.gene03964:intron | 35.0% | |
| CAATTCTCACATCTTCAAGT+CGG | - | chr3.2:55061816-55061835 | MS.gene03964:intron | 35.0% | |
| CACAAAAGCTGCTAAACAAT+GGG | - | chr3.2:55062001-55062020 | MS.gene03964:intron | 35.0% | |
| CATTGATCCTGAGTACAAAA+TGG | - | chr3.2:55063539-55063558 | MS.gene03964:intron | 35.0% | |
| CCAAATAGTTATCACCATGT+TGG | + | chr3.2:55060933-55060952 | None:intergenic | 35.0% | |
| CCAACATGGTGATAACTATT+TGG | - | chr3.2:55060930-55060949 | MS.gene03964:intron | 35.0% | |
| CGAAAAGTTGCAGTCAAATA+GGG | - | chr3.2:55062701-55062720 | MS.gene03964:CDS | 35.0% | |
| CGAAAAGTTGCTGTCAAATA+GGG | - | chr3.2:55062570-55062589 | MS.gene03964:intron | 35.0% | |
| CGAAACACAGAGATTTGATT+AGG | + | chr3.2:55064242-55064261 | None:intergenic | 35.0% | |
| CTCAAAACTAGAGGATCATA+AGG | + | chr3.2:55061718-55061737 | None:intergenic | 35.0% | |
| GATGAGGAAGAATGAAAGAA+TGG | - | chr3.2:55060180-55060199 | MS.gene03964:intron | 35.0% | |
| GATTACAGGCTGTGATAAAA+AGG | - | chr3.2:55061889-55061908 | MS.gene03964:intron | 35.0% | |
| GATTTGTCTTCATTGAAGAG+AGG | + | chr3.2:55061000-55061019 | None:intergenic | 35.0% | |
| GCAAAAATATGTGGGCAAAT+AGG | - | chr3.2:55062308-55062327 | MS.gene03964:CDS | 35.0% | |
| GGACAGAAATTGCAGTAAAT+GGG | + | chr3.2:55063749-55063768 | None:intergenic | 35.0% | |
| GGATTTCATCAAAGTTGCAA+TGG | - | chr3.2:55063515-55063534 | MS.gene03964:intron | 35.0% | |
| GGCCTTTATTAAGGTTATGT+TGG | + | chr3.2:55064221-55064240 | None:intergenic | 35.0% | |
| TAGTACACCTTGTACTATAG+TGG | - | chr3.2:55062960-55062979 | MS.gene03964:CDS | 35.0% | |
| TCAAATCATCAGGAGTCAAA+TGG | - | chr3.2:55063199-55063218 | MS.gene03964:intron | 35.0% | |
| TCTCGAAAGATCAAATCATC+AGG | - | chr3.2:55063189-55063208 | MS.gene03964:CDS | 35.0% | |
| TGAGAAATGGATACTAAGGA+AGG | - | chr3.2:55063671-55063690 | MS.gene03964:intron | 35.0% | |
| TGATGTCACAGTCTGAATTT+GGG | - | chr3.2:55062637-55062656 | MS.gene03964:CDS | 35.0% | |
| TGGACAGAAATTGCAGTAAA+TGG | + | chr3.2:55063750-55063769 | None:intergenic | 35.0% | |
| TGGTGAAACTCTTCTTTGTT+TGG | + | chr3.2:55063285-55063304 | None:intergenic | 35.0% | |
| TGTGAATCTTACCTTCTCAA+AGG | + | chr3.2:55061746-55061765 | None:intergenic | 35.0% | |
| TGTGTACGGAATTTGTGATT+AGG | + | chr3.2:55061175-55061194 | None:intergenic | 35.0% | |
| TTGATGTCACAGTCTGAATT+TGG | - | chr3.2:55062636-55062655 | MS.gene03964:CDS | 35.0% | |
| TTTCGAGACATCAGAAACAT+AGG | + | chr3.2:55063177-55063196 | None:intergenic | 35.0% | |
| ! | AATTTTGTGGACATGTTGGA+TGG | - | chr3.2:55061343-55061362 | MS.gene03964:intron | 35.0% |
| ! | AGAGAAGTAGCAGACTTTTT+AGG | - | chr3.2:55062210-55062229 | MS.gene03964:intron | 35.0% |
| ! | ATCACTAAGCACCATCATTT+TGG | + | chr3.2:55060367-55060386 | None:intergenic | 35.0% |
| ! | CAACTGAAAGATAAGCATTG+GGG | + | chr3.2:55060508-55060527 | None:intergenic | 35.0% |
| ! | GGAGTATGGAGAAAATTTTG+TGG | - | chr3.2:55061330-55061349 | MS.gene03964:intron | 35.0% |
| ! | GTGTTTCGATTTGTAGAACT+CGG | - | chr3.2:55064254-55064273 | MS.gene03964:intron | 35.0% |
| ! | TGGTTGGATTGATGGTATTA+AGG | - | chr3.2:55063872-55063891 | MS.gene03964:intron | 35.0% |
| ! | TGTTTACATGTTTTGCAGCA+TGG | + | chr3.2:55063899-55063918 | None:intergenic | 35.0% |
| ! | TGTTTTACTATCTGGAGGTT+TGG | - | chr3.2:55061935-55061954 | MS.gene03964:intron | 35.0% |
| ! | TTTTTGTGGTCTATGTAGGA+TGG | - | chr3.2:55063081-55063100 | MS.gene03964:intron | 35.0% |
| !! | AGAAGCTAGAGTACCATTTT+TGG | - | chr3.2:55063488-55063507 | MS.gene03964:intron | 35.0% |
| !! | TAGAGTACCATTTTTGGACA+AGG | - | chr3.2:55063494-55063513 | MS.gene03964:intron | 35.0% |
| !!! | CATTTTGAAGTTTTTCCACC+TGG | - | chr3.2:55061610-55061629 | MS.gene03964:intron | 35.0% |
| !!! | CTTATGATCCTCTAGTTTTG+AGG | - | chr3.2:55061716-55061735 | MS.gene03964:intron | 35.0% |
| !!! | TGGCACGTTTTTGTTATTGT+AGG | - | chr3.2:55061538-55061557 | MS.gene03964:intron | 35.0% |
| ACAACAGTTTCATTGTTGCG+AGG | - | chr3.2:55061398-55061417 | MS.gene03964:intron | 40.0% | |
| AGAGAATCCTTACCTTCCTA+AGG | - | chr3.2:55063707-55063726 | MS.gene03964:intron | 40.0% | |
| CAACAGTTTCATTGTTGCGA+GGG | - | chr3.2:55061399-55061418 | MS.gene03964:intron | 40.0% | |
| CACAGAGAAAGCTATTGAGT+GGG | - | chr3.2:55064317-55064336 | MS.gene03964:intron | 40.0% | |
| CATCACAGTCACATTGTGTA+CGG | + | chr3.2:55061189-55061208 | None:intergenic | 40.0% | |
| CATGCAGACATCAAAAACCT+TGG | - | chr3.2:55062488-55062507 | MS.gene03964:intron | 40.0% | |
| CCAGATAGTAAAACACCGAA+CGG | + | chr3.2:55061930-55061949 | None:intergenic | 40.0% | |
| CGATACCCAGACATAACATA+GGG | + | chr3.2:55062881-55062900 | None:intergenic | 40.0% | |
| CTCATTCTGTGTAGGACTTA+AGG | - | chr3.2:55062037-55062056 | MS.gene03964:intron | 40.0% | |
| GATTAGGCAATTGTTTCCTG+AGG | + | chr3.2:55061159-55061178 | None:intergenic | 40.0% | |
| GCACAAAAGCTGCTAAACAA+TGG | - | chr3.2:55062000-55062019 | MS.gene03964:intron | 40.0% | |
| GCGAAAAGTTGCAGTCAAAT+AGG | - | chr3.2:55062700-55062719 | MS.gene03964:CDS | 40.0% | |
| TAGAGTTGAGTACCTTAGGA+AGG | + | chr3.2:55063722-55063741 | None:intergenic | 40.0% | |
| TCACAGCCTGTAATCAAACA+CGG | + | chr3.2:55061884-55061903 | None:intergenic | 40.0% | |
| TCACTTCCTTGTACATTGGT+TGG | - | chr3.2:55061434-55061453 | MS.gene03964:intron | 40.0% | |
| TCGATACCCAGACATAACAT+AGG | + | chr3.2:55062882-55062901 | None:intergenic | 40.0% | |
| TCTACAATCATGAAGACCTC+AGG | - | chr3.2:55061140-55061159 | MS.gene03964:CDS | 40.0% | |
| TGAAGTCACAGTCTAGATTG+CGG | - | chr3.2:55062768-55062787 | MS.gene03964:intron | 40.0% | |
| TGATGACTCACAAGCTAAGA+GGG | - | chr3.2:55059872-55059891 | MS.gene03964:CDS | 40.0% | |
| TGATTGCCGTGTTTGATTAC+AGG | - | chr3.2:55061875-55061894 | MS.gene03964:intron | 40.0% | |
| TGCAGATCAAAGCTCTTCAT+AGG | - | chr3.2:55063421-55063440 | MS.gene03964:CDS | 40.0% | |
| TGGAGGTTTGGATTCTTCAT+TGG | - | chr3.2:55061947-55061966 | MS.gene03964:intron | 40.0% | |
| TGTGAAGCCACTATAGTACA+AGG | + | chr3.2:55062970-55062989 | None:intergenic | 40.0% | |
| TTGAGTACCTTAGGAAGGTA+AGG | + | chr3.2:55063717-55063736 | None:intergenic | 40.0% | |
| TTGTACATGGTACTCAGATG+TGG | - | chr3.2:55062847-55062866 | MS.gene03964:intron | 40.0% | |
| ! | AAATGGGTGATTTCTGGAGA+AGG | - | chr3.2:55063216-55063235 | MS.gene03964:intron | 40.0% |
| ! | ACTTCCTTGTACATTGGTTG+GGG | - | chr3.2:55061436-55061455 | MS.gene03964:intron | 40.0% |
| ! | CACTTCCTTGTACATTGGTT+GGG | - | chr3.2:55061435-55061454 | MS.gene03964:intron | 40.0% |
| ! | CTATTTGGCTCATCAAAGGT+TGG | - | chr3.2:55060945-55060964 | MS.gene03964:intron | 40.0% |
| ! | GAGACGGTTCTCTTCTTTTA+TGG | - | chr3.2:55062927-55062946 | MS.gene03964:CDS | 40.0% |
| !! | CTTCTTTGTTTGGTGCCTTA+TGG | + | chr3.2:55063275-55063294 | None:intergenic | 40.0% |
| !! | TGTGGTATACTTGCTGTACT+TGG | - | chr3.2:55059843-55059862 | MS.gene03964:CDS | 40.0% |
| !! | TTGGTAAGTGGAGTGTTGAA+AGG | + | chr3.2:55064048-55064067 | None:intergenic | 40.0% |
| !! | TTTTGGCAACTGAGTTGACT+TGG | + | chr3.2:55064416-55064435 | None:intergenic | 40.0% |
| !!! | TTCGGTGTTTTACTATCTGG+AGG | - | chr3.2:55061930-55061949 | MS.gene03964:intron | 40.0% |
| ACCAGAAGCAGGATCAACAA+TGG | + | chr3.2:55060971-55060990 | None:intergenic | 45.0% | |
| ACTTGTACTCGAGCAAAGAC+CGG | - | chr3.2:55061635-55061654 | MS.gene03964:intron | 45.0% | |
| AGAGGATCATAAGGGGTTGT+TGG | + | chr3.2:55061709-55061728 | None:intergenic | 45.0% | |
| AGCAGTTACTGCTAGATACC+TGG | - | chr3.2:55061974-55061993 | MS.gene03964:intron | 45.0% | |
| ATAGCCTCATTGAACCATGG+AGG | + | chr3.2:55061682-55061701 | None:intergenic | 45.0% | |
| ATTGTTGCGAGGGATGCTAT+AGG | - | chr3.2:55061409-55061428 | MS.gene03964:intron | 45.0% | |
| CAATCCTCCATGGTTCAATG+AGG | - | chr3.2:55061675-55061694 | MS.gene03964:intron | 45.0% | |
| CAGAAGGAACAGTTCAGTGA+TGG | - | chr3.2:55063840-55063859 | MS.gene03964:intron | 45.0% | |
| CTACTTCTCTTCCAGCCTTA+AGG | + | chr3.2:55062200-55062219 | None:intergenic | 45.0% | |
| CTATTGAGTGGGATGCTTCT+TGG | - | chr3.2:55064328-55064347 | MS.gene03964:intron | 45.0% | |
| CTGAGTACCATGTACAAACG+AGG | + | chr3.2:55062844-55062863 | None:intergenic | 45.0% | |
| CTGATGACTCACAAGCTAAG+AGG | - | chr3.2:55059871-55059890 | MS.gene03964:CDS | 45.0% | |
| CTGTGATGTTATTGCACACC+TGG | - | chr3.2:55061201-55061220 | MS.gene03964:CDS | 45.0% | |
| GAAGGATCTGACGAGATTCT+TGG | - | chr3.2:55063234-55063253 | MS.gene03964:intron | 45.0% | |
| GATCTGACGAGATTCTTGGA+GGG | - | chr3.2:55063238-55063257 | MS.gene03964:intron | 45.0% | |
| GCACAGAGAAAGCTATTGAG+TGG | - | chr3.2:55064316-55064335 | MS.gene03964:intron | 45.0% | |
| GCATTGGGGCCCAATATAAA+TGG | + | chr3.2:55060494-55060513 | None:intergenic | 45.0% | |
| GGAGTCAAATGGGTGATTTC+TGG | - | chr3.2:55063210-55063229 | MS.gene03964:intron | 45.0% | |
| GGATGGCATAGATGCAATTG+AGG | - | chr3.2:55063098-55063117 | MS.gene03964:intron | 45.0% | |
| GTAGAACTCGGCAAGACTAA+CGG | - | chr3.2:55064266-55064285 | MS.gene03964:intron | 45.0% | |
| GTAGATGGTACAATCCTCCA+TGG | - | chr3.2:55061665-55061684 | MS.gene03964:intron | 45.0% | |
| GTTGGCTATGGTTGGATTGA+TGG | - | chr3.2:55063864-55063883 | MS.gene03964:intron | 45.0% | |
| TACATGGTACTCAGATGTGG+TGG | - | chr3.2:55062850-55062869 | MS.gene03964:intron | 45.0% | |
| TAGTCCCCAACCAATGTACA+AGG | + | chr3.2:55061443-55061462 | None:intergenic | 45.0% | |
| TCAAGCAACCTTGATCCTTC+TGG | - | chr3.2:55064351-55064370 | MS.gene03964:intron | 45.0% | |
| TCGGACCCTATGTTATGTCT+GGG | - | chr3.2:55062873-55062892 | MS.gene03964:intron | 45.0% | |
| TGTACCATCTACGAAACTCC+CGG | + | chr3.2:55061657-55061676 | None:intergenic | 45.0% | |
| TTACCTTGCGGCATGTTTCT+TGG | + | chr3.2:55063305-55063324 | None:intergenic | 45.0% | |
| TTGTTGCGAGGGATGCTATA+GGG | - | chr3.2:55061410-55061429 | MS.gene03964:intron | 45.0% | |
| ! | AAGGCGTTCCTCAAAACTAG+AGG | + | chr3.2:55061727-55061746 | None:intergenic | 45.0% |
| ! | GAACAGTTCAGTGATGGAGT+TGG | - | chr3.2:55063846-55063865 | MS.gene03964:intron | 45.0% |
| ! | TACATTGGTTGGGGACTAGA+TGG | - | chr3.2:55061445-55061464 | MS.gene03964:intron | 45.0% |
| ! | TTCAGTGATGGAGTTGGCTA+TGG | - | chr3.2:55063852-55063871 | MS.gene03964:intron | 45.0% |
| ! | TTGATGACTGATGTGCCGTT+CGG | - | chr3.2:55061912-55061931 | MS.gene03964:intron | 45.0% |
| ! | TTTGAGGAACGCCTTTGAGA+AGG | - | chr3.2:55061732-55061751 | MS.gene03964:intron | 45.0% |
| !! | CTTTGAGAGGTTTTTCCCTC+AGG | - | chr3.2:55064092-55064111 | MS.gene03964:intron | 45.0% |
| !!! | CCGTTCGGTGTTTTACTATC+TGG | - | chr3.2:55061927-55061946 | MS.gene03964:intron | 45.0% |
| !!! | CTTCTCTGGCTCTACAGTTT+TGG | + | chr3.2:55064433-55064452 | None:intergenic | 45.0% |
| !!! | ATTATTATTGTTTTAAATAA+CGG | + | chr3.2:55061260-55061279 | None:intergenic | 5.0% |
| !!! | TTTATTTTATTTTATTTTTG+TGG | - | chr3.2:55063067-55063086 | MS.gene03964:intron | 5.0% |
| AAGACCGGGAGTTTCGTAGA+TGG | - | chr3.2:55061650-55061669 | MS.gene03964:intron | 50.0% | |
| ATTGCCTGCGAGAAAGCTCA+AGG | + | chr3.2:55059905-55059924 | None:intergenic | 50.0% | |
| CACACCTGGTTAGTATGTCG+CGG | - | chr3.2:55061215-55061234 | MS.gene03964:CDS | 50.0% | |
| CCAAATGCTGCTCTTCCAGA+AGG | + | chr3.2:55064369-55064388 | None:intergenic | 50.0% | |
| CTCTTGTCAGACCGTATCTC+TGG | + | chr3.2:55061779-55061798 | None:intergenic | 50.0% | |
| CTGCTCTTCCAGAAGGATCA+AGG | + | chr3.2:55064362-55064381 | None:intergenic | 50.0% | |
| CTTGTACTCGAGCAAAGACC+GGG | - | chr3.2:55061636-55061655 | MS.gene03964:intron | 50.0% | |
| GCCATTGTTGATCCTGCTTC+TGG | - | chr3.2:55060967-55060986 | MS.gene03964:intron | 50.0% | |
| GGATCTGACGAGATTCTTGG+AGG | - | chr3.2:55063237-55063256 | MS.gene03964:intron | 50.0% | |
| GGGGTCACTTCCTTGTACAT+TGG | - | chr3.2:55061430-55061449 | MS.gene03964:intron | 50.0% | |
| GTATGTCGCGGTCTAGATTG+CGG | - | chr3.2:55061227-55061246 | MS.gene03964:intron | 50.0% | |
| GTCGGACCCTATGTTATGTC+TGG | - | chr3.2:55062872-55062891 | MS.gene03964:intron | 50.0% | |
| GTTACTGCTAGATACCTGGC+TGG | - | chr3.2:55061978-55061997 | MS.gene03964:intron | 50.0% | |
| TAGACCGCGACATACTAACC+AGG | + | chr3.2:55061222-55061241 | None:intergenic | 50.0% | |
| TCACCAAGAAACATGCCGCA+AGG | - | chr3.2:55063299-55063318 | MS.gene03964:intron | 50.0% | |
| TCTCTTCCAGCCTTAAGGTC+AGG | + | chr3.2:55062195-55062214 | None:intergenic | 50.0% | |
| TGGTACTCAGATGTGGTGGT+CGG | - | chr3.2:55062854-55062873 | MS.gene03964:intron | 50.0% | |
| TGTTGCGAGGGATGCTATAG+GGG | - | chr3.2:55061411-55061430 | MS.gene03964:intron | 50.0% | |
| TTAGGGTGCACCTGACCTTA+AGG | - | chr3.2:55062182-55062201 | MS.gene03964:intron | 50.0% | |
| TTGCTCGAGTACAAGTGACC+AGG | + | chr3.2:55061631-55061650 | None:intergenic | 50.0% | |
| ! | AGAGGTTGATCACCAGAAGC+AGG | + | chr3.2:55060982-55061001 | None:intergenic | 50.0% |
| ! | CCTTCTGGAAGAGCAGCATT+TGG | - | chr3.2:55064366-55064385 | MS.gene03964:intron | 50.0% |
| ! | GTGATGGAGTTGGCTATGGT+TGG | - | chr3.2:55063856-55063875 | MS.gene03964:intron | 50.0% |
| !! | TGTCACAGATTGAAGCACCG+TGG | - | chr3.2:55060886-55060905 | MS.gene03964:CDS | 50.0% |
| ACCGTGGTCCAGATTGGAGT+GGG | - | chr3.2:55060902-55060921 | MS.gene03964:intron | 55.0% | |
| CATGCAACACTAGCTCCTCC+AGG | + | chr3.2:55064294-55064313 | None:intergenic | 55.0% | |
| CTCGAGTACAAGTGACCAGG+TGG | + | chr3.2:55061628-55061647 | None:intergenic | 55.0% | |
| GCAAGACTAACGGTTCCTGG+AGG | - | chr3.2:55064276-55064295 | MS.gene03964:intron | 55.0% | |
| GCATCCTTGAGCTTTCTCGC+AGG | - | chr3.2:55059898-55059917 | MS.gene03964:CDS | 55.0% | |
| TCGGCAAGACTAACGGTTCC+TGG | - | chr3.2:55064273-55064292 | MS.gene03964:intron | 55.0% | |
| ! | TAGCAGCTTTTGTGCCAGCC+AGG | + | chr3.2:55061995-55062014 | None:intergenic | 55.0% |
| !! | TGAAGCACCGTGGTCCAGAT+TGG | - | chr3.2:55060896-55060915 | MS.gene03964:CDS | 55.0% |
| CACCGTGGTCCAGATTGGAG+TGG | - | chr3.2:55060901-55060920 | MS.gene03964:intron | 60.0% | |
| GCCCACTCCAATCTGGACCA+CGG | + | chr3.2:55060906-55060925 | None:intergenic | 60.0% | |
| GGTGCACCTGACCTTAAGGC+TGG | - | chr3.2:55062186-55062205 | MS.gene03964:intron | 60.0% | |
| TGGTGGAGCCCACTCCAATC+TGG | + | chr3.2:55060913-55060932 | None:intergenic | 60.0% | |
| ! | TGGAGTGGGCTCCACCAACA+TGG | - | chr3.2:55060916-55060935 | MS.gene03964:intron | 60.0% |
| CGCGGTCTAGATTGCGGTCG+CGG | - | chr3.2:55061233-55061252 | MS.gene03964:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 55059840 | 55064503 | 55059840 | ID=MS.gene03964 |
| chr3.2 | mRNA | 55059840 | 55064503 | 55059840 | ID=MS.gene03964.t1;Parent=MS.gene03964 |
| chr3.2 | exon | 55064450 | 55064503 | 55064450 | ID=MS.gene03964.t1.exon1;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55064450 | 55064503 | 55064450 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| chr3.2 | exon | 55063311 | 55063442 | 55063311 | ID=MS.gene03964.t1.exon2;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55063311 | 55063442 | 55063311 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| chr3.2 | exon | 55063121 | 55063216 | 55063121 | ID=MS.gene03964.t1.exon3;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55063121 | 55063216 | 55063121 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| chr3.2 | exon | 55062877 | 55063018 | 55062877 | ID=MS.gene03964.t1.exon4;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55062877 | 55063018 | 55062877 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| chr3.2 | exon | 55062590 | 55062783 | 55062590 | ID=MS.gene03964.t1.exon5;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55062590 | 55062783 | 55062590 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| chr3.2 | exon | 55062285 | 55062446 | 55062285 | ID=MS.gene03964.t1.exon6;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55062285 | 55062446 | 55062285 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| chr3.2 | exon | 55062077 | 55062157 | 55062077 | ID=MS.gene03964.t1.exon7;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55062077 | 55062157 | 55062077 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| chr3.2 | exon | 55061023 | 55061244 | 55061023 | ID=MS.gene03964.t1.exon8;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55061023 | 55061244 | 55061023 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| chr3.2 | exon | 55060783 | 55060917 | 55060783 | ID=MS.gene03964.t1.exon9;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55060783 | 55060917 | 55060783 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| chr3.2 | exon | 55060615 | 55060695 | 55060615 | ID=MS.gene03964.t1.exon10;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55060615 | 55060695 | 55060615 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| chr3.2 | exon | 55060432 | 55060518 | 55060432 | ID=MS.gene03964.t1.exon11;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55060432 | 55060518 | 55060432 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| chr3.2 | exon | 55060230 | 55060337 | 55060230 | ID=MS.gene03964.t1.exon12;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55060230 | 55060337 | 55060230 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| chr3.2 | exon | 55059840 | 55060073 | 55059840 | ID=MS.gene03964.t1.exon13;Parent=MS.gene03964.t1 |
| chr3.2 | CDS | 55059840 | 55060073 | 55059840 | ID=cds.MS.gene03964.t1;Parent=MS.gene03964.t1 |
| Gene Sequence |
| Protein sequence |
