Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04094.t1 | XP_003600480.1 | 99.8 | 465 | 1 | 0 | 1 | 465 | 1 | 465 | 1.60E-254 | 888.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04094.t1 | Q9DE27 | 76.4 | 461 | 107 | 2 | 1 | 461 | 4 | 462 | 9.5e-200 | 697.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04094.t1 | G7J268 | 99.8 | 465 | 1 | 0 | 1 | 465 | 1 | 465 | 1.1e-254 | 888.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04094 | MS.gene022650 | PPI |
| MS.gene04094 | MS.gene32832 | PPI |
| MS.gene05640 | MS.gene04094 | PPI |
| MS.gene04094 | MS.gene037838 | PPI |
| MS.gene04094 | MS.gene015034 | PPI |
| MS.gene04094 | MS.gene28806 | PPI |
| MS.gene04094 | MS.gene012829 | PPI |
| MS.gene04094 | MS.gene07047 | PPI |
| MS.gene04094 | MS.gene050408 | PPI |
| MS.gene04094 | MS.gene37440 | PPI |
| MS.gene04094 | MS.gene04418 | PPI |
| MS.gene04094 | MS.gene072703 | PPI |
| MS.gene055437 | MS.gene04094 | PPI |
| MS.gene08109 | MS.gene04094 | PPI |
| MS.gene04094 | MS.gene04079 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04094.t1 | MTR_3g061640 | 99.785 | 465 | 1 | 0 | 1 | 465 | 1 | 465 | 0.0 | 946 |
| MS.gene04094.t1 | MTR_3g104080 | 44.206 | 466 | 233 | 7 | 1 | 448 | 1 | 457 | 1.93e-127 | 377 |
| MS.gene04094.t1 | MTR_6g023370 | 40.570 | 456 | 236 | 7 | 4 | 448 | 1 | 432 | 1.39e-103 | 316 |
| MS.gene04094.t1 | MTR_3g104080 | 43.750 | 368 | 180 | 7 | 99 | 448 | 1 | 359 | 1.73e-91 | 282 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04094.t1 | AT5G67630 | 85.867 | 467 | 62 | 1 | 1 | 463 | 1 | 467 | 0.0 | 805 |
| MS.gene04094.t1 | AT3G49830 | 79.601 | 451 | 91 | 1 | 1 | 450 | 1 | 451 | 0.0 | 748 |
| MS.gene04094.t1 | AT5G22330 | 43.791 | 459 | 245 | 5 | 1 | 448 | 1 | 457 | 3.90e-126 | 374 |
Find 136 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAGAACGCAGGGATTTC+TGG | 0.168140 | 3.2:-52989550 | MS.gene04094:intron |
| CTGTCTTTCCCTTTCTCTTT+TGG | 0.168943 | 3.2:+52989064 | None:intergenic |
| AGATGTTTCTACACCTATTT+TGG | 0.215981 | 3.2:+52989131 | None:intergenic |
| GTTGGTAGCCACAACTAAAA+TGG | 0.256258 | 3.2:+52989338 | None:intergenic |
| AAGCATTTGTTAACCAAAAT+AGG | 0.257783 | 3.2:-52989144 | MS.gene04094:CDS |
| ATGGAGACGGTTTATGATTT+GGG | 0.259809 | 3.2:-52992149 | MS.gene04094:CDS |
| GGATGAAATTCGCAAAATTC+TGG | 0.273264 | 3.2:-52989211 | MS.gene04094:CDS |
| GATGGAGACGGTTTATGATT+TGG | 0.291335 | 3.2:-52992150 | MS.gene04094:CDS |
| GGCTATAGGAGTGAGAATTA+AGG | 0.320370 | 3.2:-52992279 | MS.gene04094:CDS |
| GTGAAATTCGTGCAGAAGTC+AGG | 0.327601 | 3.2:-52989506 | MS.gene04094:CDS |
| CCCGAGCTTCGTAATCTTCC+CGG | 0.341712 | 3.2:+52992055 | None:intergenic |
| TTGAATTGGATGATATTAAT+CGG | 0.343045 | 3.2:-52989041 | MS.gene04094:CDS |
| AAAGGGAAAGACAGTTGAAT+TGG | 0.347244 | 3.2:-52989055 | MS.gene04094:CDS |
| CAATACATGTTCAGTGAAAC+AGG | 0.377429 | 3.2:-52988958 | MS.gene04094:CDS |
| CTCTATGCGCGTTAGGTCGC+GGG | 0.381377 | 3.2:+52992616 | None:intergenic |
| ATTGATCGTCCGGCGGTGGC+TGG | 0.381879 | 3.2:-52992215 | MS.gene04094:CDS |
| GGAGACGGCGCGTGGCTCTA+AGG | 0.387209 | 3.2:+52992547 | None:intergenic |
| ATTGCGATTGATAAAGCTTC+CGG | 0.389772 | 3.2:-52992074 | MS.gene04094:CDS |
| CGAATTTCATCCTCAGTGTA+AGG | 0.394218 | 3.2:+52989222 | None:intergenic |
| ACTCCTTTCGCCATGATTGC+TGG | 0.398150 | 3.2:-52992362 | MS.gene04094:CDS |
| GGCTGGAGCTGCGGCGAAGA+CGG | 0.399233 | 3.2:-52992198 | MS.gene04094:CDS |
| GGCGAGGAGAACAGCGCGTC+CGG | 0.402500 | 3.2:+52992448 | None:intergenic |
| GCTGGAGCTGCGGCGAAGAC+GGG | 0.407291 | 3.2:-52992197 | MS.gene04094:CDS |
| TTCATTCCTCAATCGGGCTC+TGG | 0.407946 | 3.2:-52989376 | MS.gene04094:CDS |
| CCTAATCACAGCATCTGCTT+TGG | 0.420355 | 3.2:-52989091 | MS.gene04094:CDS |
| CCACGCGCTCTATGCGCGTT+AGG | 0.424297 | 3.2:+52992609 | None:intergenic |
| GTCGAGGGATTTCGATGCTA+TGG | 0.424447 | 3.2:-52992018 | MS.gene04094:CDS |
| AAGATCGACACAGTACTTGA+TGG | 0.429777 | 3.2:-52988992 | MS.gene04094:CDS |
| GCTCTATGCGCGTTAGGTCG+CGG | 0.432519 | 3.2:+52992615 | None:intergenic |
| CGGCTTTACGAGCGGAGACT+TGG | 0.439804 | 3.2:+52992510 | None:intergenic |
| CGAAGATGATTGAGGCGATT+GGG | 0.440792 | 3.2:-52992124 | MS.gene04094:CDS |
| CTCGCCGGTCAGCCAGGTAC+TGG | 0.441713 | 3.2:-52992431 | MS.gene04094:CDS |
| CTCTTCTGCAACTCACCATC+AGG | 0.442493 | 3.2:+52991969 | None:intergenic |
| GCGAAGATGATTGAGGCGAT+TGG | 0.445428 | 3.2:-52992125 | MS.gene04094:CDS |
| TCGAGGGATTTCGATGCTAT+GGG | 0.452478 | 3.2:-52992017 | MS.gene04094:CDS |
| GTTCTCCTCGCCGGTCAGCC+AGG | 0.456290 | 3.2:-52992437 | MS.gene04094:CDS |
| CACTCACACATCCGCGGCCT+CGG | 0.458095 | 3.2:-52992581 | MS.gene04094:CDS |
| TGAATTGGATGATATTAATC+GGG | 0.459515 | 3.2:-52989040 | MS.gene04094:CDS |
| TTGCGATTGATAAAGCTTCC+GGG | 0.460880 | 3.2:-52992073 | MS.gene04094:CDS |
| AGTGAGAATTAAGGAGGAAA+CGG | 0.465530 | 3.2:-52992270 | MS.gene04094:CDS |
| GCCGACCATGCCTTCGGAGA+CGG | 0.465787 | 3.2:+52992532 | None:intergenic |
| GAGGAAACGGAGGTGATTGA+AGG | 0.467645 | 3.2:-52992257 | MS.gene04094:CDS |
| GTTGAGTAGAGATGATGAGT+AGG | 0.468747 | 3.2:+52989244 | None:intergenic |
| GGCAAAACCGCTATTGCAAT+GGG | 0.477742 | 3.2:-52992410 | MS.gene04094:CDS |
| CATTCTCCAGAGCCCGATTG+AGG | 0.480580 | 3.2:+52989370 | None:intergenic |
| CTTCCGAAAAGCTTGTGTTA+AGG | 0.481406 | 3.2:+52992301 | None:intergenic |
| TTGGTAGCCACAACTAAAAT+GGG | 0.483901 | 3.2:+52989339 | None:intergenic |
| GACTTGGCCGACCATGCCTT+CGG | 0.485767 | 3.2:+52992526 | None:intergenic |
| GTGGCAGAGTGGAAAGAAGA+AGG | 0.488801 | 3.2:-52989465 | MS.gene04094:CDS |
| TTTCGATGCTATGGGGCCTC+AGG | 0.488923 | 3.2:-52992009 | MS.gene04094:CDS |
| CGCCATTCCCATTGCAATAG+CGG | 0.489903 | 3.2:+52992403 | None:intergenic |
| TAGGCGATCAAGTAGATCAA+TGG | 0.491544 | 3.2:+52989263 | None:intergenic |
| AAGCTCACTACCAGCAATCA+TGG | 0.493183 | 3.2:+52992352 | None:intergenic |
| AGATTGATGTTATTAATAGC+AGG | 0.494305 | 3.2:-52991914 | MS.gene04094:intron |
| TCCGGGAAGATTACGAAGCT+CGG | 0.495891 | 3.2:-52992056 | MS.gene04094:CDS |
| CCAAAGCAGATGCTGTGATT+AGG | 0.506831 | 3.2:+52989091 | None:intergenic |
| ACGAATTTCACCCGTGTCAC+CGG | 0.506863 | 3.2:+52989518 | None:intergenic |
| TGGCAAAACCGCTATTGCAA+TGG | 0.507380 | 3.2:-52992411 | MS.gene04094:CDS |
| GGAAGGAGAAAGTGACGAGT+GGG | 0.509018 | 3.2:-52992103 | MS.gene04094:CDS |
| AGGCGATCAAGTAGATCAAT+GGG | 0.510466 | 3.2:+52989264 | None:intergenic |
| TCATGTCTACGTCTTCCTCT+TGG | 0.512507 | 3.2:+52989178 | None:intergenic |
| GCCGCAGCTCCAGCCACCGC+CGG | 0.514286 | 3.2:+52992206 | None:intergenic |
| TCAGATTGATCGTCCGGCGG+TGG | 0.514313 | 3.2:-52992219 | MS.gene04094:CDS |
| TGAGGTTCAGATTGATCGTC+CGG | 0.515205 | 3.2:-52992225 | MS.gene04094:CDS |
| CCGGGAAGATTACGAAGCTC+GGG | 0.516348 | 3.2:-52992055 | MS.gene04094:CDS |
| AAGAGTCGAGACCGAGGCCG+CGG | 0.517810 | 3.2:+52992570 | None:intergenic |
| TTTGCCAGTACCTGGCTGAC+CGG | 0.518638 | 3.2:+52992427 | None:intergenic |
| GGGAAGGAGAAAGTGACGAG+TGG | 0.523320 | 3.2:-52992104 | MS.gene04094:CDS |
| TGTGTACCTCATCAATGAAA+AGG | 0.533089 | 3.2:+52989418 | None:intergenic |
| TCCGGCGGTGGCTGGAGCTG+CGG | 0.535910 | 3.2:-52992207 | MS.gene04094:CDS |
| TCGTGTTAATTTCAGAACGC+AGG | 0.541700 | 3.2:-52989559 | MS.gene04094:intron |
| TTTGGCATGCCAAAAGAGAA+AGG | 0.542916 | 3.2:-52989073 | MS.gene04094:CDS |
| GAGCCACGCGCCGTCTCCGA+AGG | 0.543555 | 3.2:-52992542 | MS.gene04094:CDS |
| TGGAGACGGTTTATGATTTG+GGG | 0.546299 | 3.2:-52992148 | MS.gene04094:CDS |
| GGAAAGGCAGAGATTGTGCC+TGG | 0.550110 | 3.2:-52989444 | MS.gene04094:CDS |
| AACCGCTATTGCAATGGGAA+TGG | 0.556997 | 3.2:-52992405 | MS.gene04094:CDS |
| AACGGAGGTGATTGAAGGTG+AGG | 0.557415 | 3.2:-52992252 | MS.gene04094:CDS |
| GGACGCGCTGTTCTCCTCGC+CGG | 0.560307 | 3.2:-52992446 | MS.gene04094:CDS |
| CTGGAGCTGCGGCGAAGACG+GGG | 0.560612 | 3.2:-52992196 | MS.gene04094:CDS |
| TATAGGAGTGAGAATTAAGG+AGG | 0.560876 | 3.2:-52992276 | MS.gene04094:CDS |
| TTGGCATGCCAAAAGAGAAA+GGG | 0.561252 | 3.2:-52989072 | MS.gene04094:CDS |
| CGTGTTAATTTCAGAACGCA+GGG | 0.562879 | 3.2:-52989558 | MS.gene04094:intron |
| AGATGCTGTGATTAGGTGAA+TGG | 0.564890 | 3.2:+52989098 | None:intergenic |
| AAGTTTGTGCAGTGTCCTGA+TGG | 0.565334 | 3.2:-52991984 | MS.gene04094:CDS |
| ATGGGAATGGCGAAATCCCT+CGG | 0.565356 | 3.2:-52992392 | MS.gene04094:CDS |
| GCCGTCTCCGAAGGCATGGT+CGG | 0.566014 | 3.2:-52992533 | MS.gene04094:CDS |
| CCTAACGCGCATAGAGCGCG+TGG | 0.566275 | 3.2:-52992609 | MS.gene04094:CDS |
| ACGCGCCGTCTCCGAAGGCA+TGG | 0.570079 | 3.2:-52992537 | MS.gene04094:CDS |
| GTCTCCGCTCGTAAAGCCGC+CGG | 0.573288 | 3.2:-52992506 | MS.gene04094:CDS |
| TGGTGAGTTGCAGAAGAGGA+AGG | 0.574351 | 3.2:-52991964 | MS.gene04094:CDS |
| GATTGAAGGTGAGGTTGTTG+AGG | 0.575785 | 3.2:-52992243 | MS.gene04094:CDS |
| ATGCCTTCGGAGACGGCGCG+TGG | 0.577386 | 3.2:+52992539 | None:intergenic |
| AGAGGCATCACAACTATTCG+AGG | 0.577787 | 3.2:-52989315 | MS.gene04094:CDS |
| ATTTCACTGGACCATAGCAT+TGG | 0.578908 | 3.2:+52988915 | None:intergenic |
| CGTTATCCTCCAGATGATCA+AGG | 0.584244 | 3.2:-52992483 | MS.gene04094:CDS |
| TACCGTCCTTGATCATCTGG+AGG | 0.584863 | 3.2:+52992477 | None:intergenic |
| ATCAAGGACGGTAAAATCGC+CGG | 0.587643 | 3.2:-52992467 | MS.gene04094:CDS |
| TGAAATTCGTGCAGAAGTCA+GGG | 0.588620 | 3.2:-52989505 | MS.gene04094:CDS |
| AATAGTTGTGATGCCTCTGT+TGG | 0.588977 | 3.2:+52989320 | None:intergenic |
| GGAACAAATTGACACGAAAG+TGG | 0.589018 | 3.2:-52989484 | MS.gene04094:CDS |
| AGAGTGGAAAGAAGAAGGAA+AGG | 0.593025 | 3.2:-52989460 | MS.gene04094:CDS |
| GACGTTGAAGTCGACAGAGA+TGG | 0.594302 | 3.2:-52992168 | MS.gene04094:CDS |
| GAGAATTAAGGAGGAAACGG+AGG | 0.595347 | 3.2:-52992267 | MS.gene04094:CDS |
| TGAGTTGCAGAAGAGGAAGG+AGG | 0.595760 | 3.2:-52991961 | MS.gene04094:CDS |
| ACAAATTACAAATCCCCACA+TGG | 0.598468 | 3.2:-52989291 | MS.gene04094:CDS |
| AACGCCGGCGGCTTTACGAG+CGG | 0.602307 | 3.2:+52992502 | None:intergenic |
| GATGATTGAGGCGATTGGGA+AGG | 0.606012 | 3.2:-52992120 | MS.gene04094:CDS |
| GGAGACGGTTTATGATTTGG+GGG | 0.606487 | 3.2:-52992147 | MS.gene04094:CDS |
| TGAAGACGACACCAATGCTA+TGG | 0.611055 | 3.2:-52988926 | MS.gene04094:CDS |
| CTGATGGTGAGTTGCAGAAG+AGG | 0.612555 | 3.2:-52991968 | MS.gene04094:CDS |
| GTTGCAGAAGAGGAAGGAGG+TGG | 0.615066 | 3.2:-52991958 | MS.gene04094:CDS |
| GAAGGAGAAAGTGACGAGTG+GGG | 0.620381 | 3.2:-52992102 | MS.gene04094:CDS |
| CTACCAGCAATCATGGCGAA+AGG | 0.622667 | 3.2:+52992359 | None:intergenic |
| GATCAATGGGAATCCCATGT+GGG | 0.625545 | 3.2:+52989277 | None:intergenic |
| TTAGTTGTGGCTACCAACAG+AGG | 0.628149 | 3.2:-52989333 | MS.gene04094:CDS |
| GAAAGGAGTCTCAAGACCGA+GGG | 0.644534 | 3.2:+52992376 | None:intergenic |
| CAGTACCTGGCTGACCGGCG+AGG | 0.645488 | 3.2:+52992432 | None:intergenic |
| CACTGCACAAACTTCACCTG+AGG | 0.646673 | 3.2:+52991993 | None:intergenic |
| CGAAAGGAGTCTCAAGACCG+AGG | 0.650449 | 3.2:+52992375 | None:intergenic |
| TTGACACGAAAGTGGCAGAG+TGG | 0.654228 | 3.2:-52989476 | MS.gene04094:CDS |
| ATCCTCCAGATGATCAAGGA+CGG | 0.657130 | 3.2:-52992479 | MS.gene04094:CDS |
| AGATCAATGGGAATCCCATG+TGG | 0.657627 | 3.2:+52989276 | None:intergenic |
| TCATCAATGAAAAGGACACC+AGG | 0.662622 | 3.2:+52989426 | None:intergenic |
| GAAGTCGACAGAGATGGAGA+CGG | 0.663443 | 3.2:-52992162 | MS.gene04094:CDS |
| GATCATCTGGAGGATAACGC+CGG | 0.668449 | 3.2:+52992487 | None:intergenic |
| GAAGACGTAGACATGAGTGA+AGG | 0.670929 | 3.2:-52989171 | MS.gene04094:CDS |
| CGAGGGATTTCGATGCTATG+GGG | 0.673383 | 3.2:-52992016 | MS.gene04094:CDS |
| ATCAATGGGAATCCCATGTG+GGG | 0.673789 | 3.2:+52989278 | None:intergenic |
| CAAATTACAAATCCCCACAT+GGG | 0.679587 | 3.2:-52989290 | MS.gene04094:CDS |
| CTAACGCGCATAGAGCGCGT+GGG | 0.688219 | 3.2:-52992608 | MS.gene04094:CDS |
| TCTGGATATCAGATGCCAAG+AGG | 0.689336 | 3.2:-52989193 | MS.gene04094:CDS |
| CTAAGGAAGAGTCGAGACCG+AGG | 0.697389 | 3.2:+52992564 | None:intergenic |
| GGAGCACACTCACACATCCG+CGG | 0.702267 | 3.2:-52992587 | MS.gene04094:CDS |
| GGTTCAGATTGATCGTCCGG+CGG | 0.711952 | 3.2:-52992222 | MS.gene04094:CDS |
| CATCTGGAGGATAACGCCGG+CGG | 0.729769 | 3.2:+52992490 | None:intergenic |
| CTCTACTCAACCTTACACTG+AGG | 0.741639 | 3.2:-52989232 | MS.gene04094:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAGAAAAATTGTT+TGG | + | chr3.2:52991541-52991560 | None:intergenic | 10.0% |
| !! | TAAATCTAAATAAATACTAA+GGG | + | chr3.2:52991642-52991661 | None:intergenic | 10.0% |
| !!! | TTCAAAAAAAAAAACATTTT+GGG | + | chr3.2:52990618-52990637 | None:intergenic | 10.0% |
| !! | AAATGTTAAGTCATATAAAA+AGG | - | chr3.2:52990652-52990671 | MS.gene04094:intron | 15.0% |
| !! | AAATTATGAAAAGCAAAAAA+AGG | + | chr3.2:52989689-52989708 | None:intergenic | 15.0% |
| !! | AATTATGAAAAGCAAAAAAA+GGG | + | chr3.2:52989688-52989707 | None:intergenic | 15.0% |
| !! | ATATGAAATAAAAACTATAC+AGG | + | chr3.2:52990134-52990153 | None:intergenic | 15.0% |
| !! | GTAAATCTAAATAAATACTA+AGG | + | chr3.2:52991643-52991662 | None:intergenic | 15.0% |
| !!! | AAATTTTAAAAACTGAAAAC+CGG | - | chr3.2:52991600-52991619 | MS.gene04094:intron | 15.0% |
| !!! | AATTATGTTGTTTTTACAAA+TGG | + | chr3.2:52989810-52989829 | None:intergenic | 15.0% |
| !!! | GTTCAAAAAAAAAAACATTT+TGG | + | chr3.2:52990619-52990638 | None:intergenic | 15.0% |
| !!! | TCAAAAAAAAAAACATTTTG+GGG | + | chr3.2:52990617-52990636 | None:intergenic | 15.0% |
| !!! | TGTTAATTAGCTTTATATTA+AGG | - | chr3.2:52990703-52990722 | MS.gene04094:intron | 15.0% |
| !! | AATTATGCCATTAATGAAAA+AGG | + | chr3.2:52991475-52991494 | None:intergenic | 20.0% |
| !! | AATTGTAATAACTTCAATCA+TGG | - | chr3.2:52991491-52991510 | MS.gene04094:intron | 20.0% |
| !! | ATTATGAAAAGCAAAAAAAG+GGG | + | chr3.2:52989687-52989706 | None:intergenic | 20.0% |
| !! | TTGAATTGGATGATATTAAT+CGG | - | chr3.2:52992518-52992537 | MS.gene04094:CDS | 20.0% |
| !!! | AAATTATGTTGTTTCTTTGA+TGG | - | chr3.2:52990256-52990275 | MS.gene04094:intron | 20.0% |
| !!! | ACTAATCTAAAACAAATCAT+TGG | + | chr3.2:52991077-52991096 | None:intergenic | 20.0% |
| !!! | ATTTGGTTGTTTTATGTTTT+TGG | - | chr3.2:52991179-52991198 | MS.gene04094:intron | 20.0% |
| !!! | TAAGGTAATGTTTGTTTTTA+TGG | - | chr3.2:52990721-52990740 | MS.gene04094:intron | 20.0% |
| !!! | TATTAAATTTTCCAACTTGT+TGG | - | chr3.2:52991909-52991928 | MS.gene04094:intron | 20.0% |
| !!! | TCTTTTGAAAACTAAAAACA+CGG | - | chr3.2:52991442-52991461 | MS.gene04094:intron | 20.0% |
| !!! | TGAAGTTATGTTTGTTTTTA+GGG | - | chr3.2:52989751-52989770 | MS.gene04094:intron | 20.0% |
| !!! | TTAATAGAAAGTTTTACATC+TGG | + | chr3.2:52991895-52991914 | None:intergenic | 20.0% |
| !!! | TTGAAGTTATGTTTGTTTTT+AGG | - | chr3.2:52989750-52989769 | MS.gene04094:intron | 20.0% |
| ! | ACTTCAGAAAAGAGATATTA+TGG | + | chr3.2:52990989-52991008 | None:intergenic | 25.0% |
| ! | AGATTGATGTTATTAATAGC+AGG | - | chr3.2:52989645-52989664 | MS.gene04094:intron | 25.0% |
| ! | ATAGATCTGTGTCAAAAATT+TGG | - | chr3.2:52991162-52991181 | MS.gene04094:intron | 25.0% |
| ! | CTATACTTCTCAATTGTATT+TGG | + | chr3.2:52990196-52990215 | None:intergenic | 25.0% |
| ! | CTTCAGAAAAGAGATATTAT+GGG | + | chr3.2:52990988-52991007 | None:intergenic | 25.0% |
| ! | GAAGTTATAGTTTGAGTAAT+TGG | - | chr3.2:52990062-52990081 | MS.gene04094:intron | 25.0% |
| ! | GATTATCAAATGATGTATGT+AGG | - | chr3.2:52990755-52990774 | MS.gene04094:intron | 25.0% |
| ! | GTTAAAAGAAACTCATCATA+TGG | + | chr3.2:52991120-52991139 | None:intergenic | 25.0% |
| ! | TCTTATAACTTACATGCAAA+CGG | + | chr3.2:52989884-52989903 | None:intergenic | 25.0% |
| ! | TGAATTGGATGATATTAATC+GGG | - | chr3.2:52992519-52992538 | MS.gene04094:CDS | 25.0% |
| ! | TTAAAACCACATAGAAAACT+TGG | + | chr3.2:52991286-52991305 | None:intergenic | 25.0% |
| ! | TTGAAATTGAAAACAGCTTA+TGG | - | chr3.2:52989949-52989968 | MS.gene04094:intron | 25.0% |
| !! | AAGCATTTGTTAACCAAAAT+AGG | - | chr3.2:52992415-52992434 | MS.gene04094:CDS | 25.0% |
| !! | TTTTTGTGATGTGATCATTT+TGG | - | chr3.2:52990434-52990453 | MS.gene04094:intron | 25.0% |
| !!! | AAAAAACATTTTGGGGAAAA+AGG | + | chr3.2:52990610-52990629 | None:intergenic | 25.0% |
| !!! | AAAAACATTTTGGGGAAAAA+GGG | + | chr3.2:52990609-52990628 | None:intergenic | 25.0% |
| !!! | AGAACAACCTTTTTCATTAA+TGG | - | chr3.2:52991465-52991484 | MS.gene04094:intron | 25.0% |
| !!! | GAATGATTTTAGAGAGAAAA+GGG | + | chr3.2:52991869-52991888 | None:intergenic | 25.0% |
| AATTTATACAGACTTGCCAA+TGG | - | chr3.2:52990385-52990404 | MS.gene04094:intron | 30.0% | |
| ACTGTTTCCATAAGTTATCT+TGG | - | chr3.2:52990836-52990855 | MS.gene04094:intron | 30.0% | |
| CAACTTGTAACACAAGAAAA+AGG | + | chr3.2:52991954-52991973 | None:intergenic | 30.0% | |
| CTAAATCGTCAAACAAAACT+TGG | + | chr3.2:52990332-52990351 | None:intergenic | 30.0% | |
| CTAATCCAAAACAAATGATG+TGG | + | chr3.2:52990106-52990125 | None:intergenic | 30.0% | |
| CTAGTAGAAAAGCTGAAATA+AGG | - | chr3.2:52990949-52990968 | MS.gene04094:intron | 30.0% | |
| GAGAACTAAAAAACAGAAAG+TGG | - | chr3.2:52991387-52991406 | MS.gene04094:intron | 30.0% | |
| GTAAATCCTCATAGAAAACT+TGG | + | chr3.2:52991249-52991268 | None:intergenic | 30.0% | |
| TATCTTGTGTTTATCCAAAC+AGG | + | chr3.2:52990782-52990801 | None:intergenic | 30.0% | |
| TCAAATAAGTGAATCCGAAT+AGG | - | chr3.2:52990020-52990039 | MS.gene04094:intron | 30.0% | |
| TGAAATAAGGCAATCTAAAC+TGG | - | chr3.2:52990962-52990981 | MS.gene04094:intron | 30.0% | |
| TTGAACTTATGAGCCTATAT+GGG | + | chr3.2:52990004-52990023 | None:intergenic | 30.0% | |
| TTTGAACTTATGAGCCTATA+TGG | + | chr3.2:52990005-52990024 | None:intergenic | 30.0% | |
| ! | TAGAAAGTTTTACATCTGGA+AGG | + | chr3.2:52991891-52991910 | None:intergenic | 30.0% |
| ! | TGTTATCCAAGTTTTCTATG+AGG | - | chr3.2:52991240-52991259 | MS.gene04094:intron | 30.0% |
| ! | TTAACTGTGTGACTTTGAAA+TGG | - | chr3.2:52991135-52991154 | MS.gene04094:intron | 30.0% |
| ! | TTACATCCAAGTTTTCTATG+TGG | - | chr3.2:52991277-52991296 | MS.gene04094:intron | 30.0% |
| ! | TTTTTGTGAGGTGATCATTT+TGG | - | chr3.2:52991700-52991719 | MS.gene04094:intron | 30.0% |
| !! | AGATGTTTCTACACCTATTT+TGG | + | chr3.2:52992431-52992450 | None:intergenic | 30.0% |
| !! | GGAATGATTTTAGAGAGAAA+AGG | + | chr3.2:52991870-52991889 | None:intergenic | 30.0% |
| !! | TAACTGTGTGACTTTGAAAT+GGG | - | chr3.2:52991136-52991155 | MS.gene04094:intron | 30.0% |
| !! | TCGGGTTTACAATTTGTTTT+TGG | - | chr3.2:52992537-52992556 | MS.gene04094:CDS | 30.0% |
| !!! | CATGATGCTTTATTTTTGTG+AGG | - | chr3.2:52991688-52991707 | MS.gene04094:intron | 30.0% |
| AAAGGGAAAGACAGTTGAAT+TGG | - | chr3.2:52992504-52992523 | MS.gene04094:CDS | 35.0% | |
| AAGTCCTCCAAGATAACTTA+TGG | + | chr3.2:52990846-52990865 | None:intergenic | 35.0% | |
| AAGTTATCTTGGAGGACTTA+TGG | - | chr3.2:52990847-52990866 | MS.gene04094:intron | 35.0% | |
| AATGGTACCTACATAAACCA+TGG | + | chr3.2:52989792-52989811 | None:intergenic | 35.0% | |
| ACAAATTACAAATCCCCACA+TGG | - | chr3.2:52992268-52992287 | MS.gene04094:CDS | 35.0% | |
| ACATATTTCCATTAGCTCAC+CGG | + | chr3.2:52989930-52989949 | None:intergenic | 35.0% | |
| ACGCTAAGAGCAAATTAATC+AGG | + | chr3.2:52991210-52991229 | None:intergenic | 35.0% | |
| AGCTAAACAAACCAACAAGT+TGG | + | chr3.2:52991923-52991942 | None:intergenic | 35.0% | |
| AGTGAGAATTAAGGAGGAAA+CGG | - | chr3.2:52989289-52989308 | MS.gene04094:CDS | 35.0% | |
| ATGGAGACGGTTTATGATTT+GGG | - | chr3.2:52989410-52989429 | MS.gene04094:CDS | 35.0% | |
| ATTGCGATTGATAAAGCTTC+CGG | - | chr3.2:52989485-52989504 | MS.gene04094:CDS | 35.0% | |
| CAAATTACAAATCCCCACAT+GGG | - | chr3.2:52992269-52992288 | MS.gene04094:CDS | 35.0% | |
| CAATACATGTTCAGTGAAAC+AGG | - | chr3.2:52992601-52992620 | MS.gene04094:CDS | 35.0% | |
| CGAGATAATATCGACCTATT+CGG | + | chr3.2:52990037-52990056 | None:intergenic | 35.0% | |
| CTTGTAACACAAGAAAAAGG+AGG | + | chr3.2:52991951-52991970 | None:intergenic | 35.0% | |
| GAACATTGCAATACAACTCT+AGG | + | chr3.2:52990308-52990327 | None:intergenic | 35.0% | |
| GGATGAAATTCGCAAAATTC+TGG | - | chr3.2:52992348-52992367 | MS.gene04094:CDS | 35.0% | |
| GTTTCCATAAGTTATCTTGG+AGG | - | chr3.2:52990839-52990858 | MS.gene04094:intron | 35.0% | |
| TATAGGAGTGAGAATTAAGG+AGG | - | chr3.2:52989283-52989302 | MS.gene04094:CDS | 35.0% | |
| TGTGTACCTCATCAATGAAA+AGG | + | chr3.2:52992144-52992163 | None:intergenic | 35.0% | |
| TTGCATAAGTTCTCCCATAT+AGG | - | chr3.2:52989988-52990007 | MS.gene04094:intron | 35.0% | |
| TTGTGTTACAAGTTGCTTCT+TGG | - | chr3.2:52991959-52991978 | MS.gene04094:CDS | 35.0% | |
| ! | AAGCCTTAACACAAGCTTTT+CGG | - | chr3.2:52989255-52989274 | MS.gene04094:CDS | 35.0% |
| ! | AGAAGCCACATCATTTGTTT+TGG | - | chr3.2:52990098-52990117 | MS.gene04094:intron | 35.0% |
| ! | AGTGCTTTTCATTCCTCAAT+CGG | - | chr3.2:52992176-52992195 | MS.gene04094:CDS | 35.0% |
| ! | AGTTGTGTGACTTTAGAAAC+TGG | - | chr3.2:52990214-52990233 | MS.gene04094:intron | 35.0% |
| ! | TTGGTAGCCACAACTAAAAT+GGG | + | chr3.2:52992223-52992242 | None:intergenic | 35.0% |
| !! | GCTGTTTTCATAAGCTATAC+CGG | - | chr3.2:52989908-52989927 | MS.gene04094:intron | 35.0% |
| !!! | AATGTCTCCCATTTTAGTTG+TGG | - | chr3.2:52992213-52992232 | MS.gene04094:CDS | 35.0% |
| !!! | TTGATGGTTTTGAAGATTCC+TGG | - | chr3.2:52990272-52990291 | MS.gene04094:intron | 35.0% |
| AAGATCGACACAGTACTTGA+TGG | - | chr3.2:52992567-52992586 | MS.gene04094:CDS | 40.0% | |
| AATAGTTGTGATGCCTCTGT+TGG | + | chr3.2:52992242-52992261 | None:intergenic | 40.0% | |
| AGAGTGGAAAGAAGAAGGAA+AGG | - | chr3.2:52992099-52992118 | MS.gene04094:CDS | 40.0% | |
| AGATGCTGTGATTAGGTGAA+TGG | + | chr3.2:52992464-52992483 | None:intergenic | 40.0% | |
| AGGCGATCAAGTAGATCAAT+GGG | + | chr3.2:52992298-52992317 | None:intergenic | 40.0% | |
| AGTGCTTCCATGGTTTATGT+AGG | - | chr3.2:52989782-52989801 | MS.gene04094:intron | 40.0% | |
| ATCATGCTGCTCAAGACTTA+GGG | + | chr3.2:52991674-52991693 | None:intergenic | 40.0% | |
| ATCCCAATCTCGACGAAAAA+GGG | + | chr3.2:52991736-52991755 | None:intergenic | 40.0% | |
| ATGGGAGAACTTATGCAAAC+AGG | + | chr3.2:52989986-52990005 | None:intergenic | 40.0% | |
| ATTGGCTGTAATCTAGCAAG+TGG | - | chr3.2:52991022-52991041 | MS.gene04094:intron | 40.0% | |
| CGAATTTCATCCTCAGTGTA+AGG | + | chr3.2:52992340-52992359 | None:intergenic | 40.0% | |
| CGTGTTAATTTCAGAACGCA+GGG | - | chr3.2:52992001-52992020 | MS.gene04094:CDS | 40.0% | |
| CTTCCGAAAAGCTTGTGTTA+AGG | + | chr3.2:52989261-52989280 | None:intergenic | 40.0% | |
| GAATGAGTCAATGACAGCTT+TGG | - | chr3.2:52990537-52990556 | MS.gene04094:intron | 40.0% | |
| GATGGAGACGGTTTATGATT+TGG | - | chr3.2:52989409-52989428 | MS.gene04094:CDS | 40.0% | |
| GGAACAAATTGACACGAAAG+TGG | - | chr3.2:52992075-52992094 | MS.gene04094:CDS | 40.0% | |
| GGCTATAGGAGTGAGAATTA+AGG | - | chr3.2:52989280-52989299 | MS.gene04094:CDS | 40.0% | |
| GTTGAGTAGAGATGATGAGT+AGG | + | chr3.2:52992318-52992337 | None:intergenic | 40.0% | |
| TAGGCGATCAAGTAGATCAA+TGG | + | chr3.2:52992299-52992318 | None:intergenic | 40.0% | |
| TATCCCAATCTCGACGAAAA+AGG | + | chr3.2:52991737-52991756 | None:intergenic | 40.0% | |
| TCATCAATGAAAAGGACACC+AGG | + | chr3.2:52992136-52992155 | None:intergenic | 40.0% | |
| TCGTGTTAATTTCAGAACGC+AGG | - | chr3.2:52992000-52992019 | MS.gene04094:CDS | 40.0% | |
| TGAAATTCGTGCAGAAGTCA+GGG | - | chr3.2:52992054-52992073 | MS.gene04094:CDS | 40.0% | |
| TGATGTATGTAGGTCCTGTT+TGG | - | chr3.2:52990765-52990784 | MS.gene04094:intron | 40.0% | |
| TGGAGACGGTTTATGATTTG+GGG | - | chr3.2:52989411-52989430 | MS.gene04094:CDS | 40.0% | |
| TTATACAGACTTGCCAATGG+TGG | - | chr3.2:52990388-52990407 | MS.gene04094:intron | 40.0% | |
| TTGCGATTGATAAAGCTTCC+GGG | - | chr3.2:52989486-52989505 | MS.gene04094:CDS | 40.0% | |
| TTGGCATGCCAAAAGAGAAA+GGG | - | chr3.2:52992487-52992506 | MS.gene04094:CDS | 40.0% | |
| TTTGGCATGCCAAAAGAGAA+AGG | - | chr3.2:52992486-52992505 | MS.gene04094:CDS | 40.0% | |
| ! | ACTCTAGGAGCAAATTAACC+AGG | + | chr3.2:52990293-52990312 | None:intergenic | 40.0% |
| ! | CTGTCTTTCCCTTTCTCTTT+TGG | + | chr3.2:52992498-52992517 | None:intergenic | 40.0% |
| ! | CTTAACACAAGCTTTTCGGA+AGG | - | chr3.2:52989259-52989278 | MS.gene04094:CDS | 40.0% |
| ! | GGGCTTGTTTGAATCAATTC+CGG | + | chr3.2:52991622-52991641 | None:intergenic | 40.0% |
| ! | GTGCTTTTCATTCCTCAATC+GGG | - | chr3.2:52992177-52992196 | MS.gene04094:CDS | 40.0% |
| ! | TGGTGTCCTTTTCATTGATG+AGG | - | chr3.2:52992135-52992154 | MS.gene04094:CDS | 40.0% |
| ! | TTTTACCGTCCTTGATCATC+TGG | + | chr3.2:52989088-52989107 | None:intergenic | 40.0% |
| !! | GGTAAATGAAAGTGCTTCCA+TGG | - | chr3.2:52989772-52989791 | MS.gene04094:intron | 40.0% |
| !! | GTTGGTAGCCACAACTAAAA+TGG | + | chr3.2:52992224-52992243 | None:intergenic | 40.0% |
| AACCGCTATTGCAATGGGAA+TGG | - | chr3.2:52989154-52989173 | MS.gene04094:CDS | 45.0% | |
| AAGCTATACCGGTGAGCTAA+TGG | - | chr3.2:52989919-52989938 | MS.gene04094:intron | 45.0% | |
| AAGCTCACTACCAGCAATCA+TGG | + | chr3.2:52989210-52989229 | None:intergenic | 45.0% | |
| AAGTTTGTGCAGTGTCCTGA+TGG | - | chr3.2:52989575-52989594 | MS.gene04094:intron | 45.0% | |
| AGATCAATGGGAATCCCATG+TGG | + | chr3.2:52992286-52992305 | None:intergenic | 45.0% | |
| AGTTCTCCCAAACTGTCTCA+CGG | - | chr3.2:52990917-52990936 | MS.gene04094:intron | 45.0% | |
| ATATACCACCATGCTACCCA+AGG | + | chr3.2:52990414-52990433 | None:intergenic | 45.0% | |
| ATCAAGGACGGTAAAATCGC+CGG | - | chr3.2:52989092-52989111 | MS.gene04094:CDS | 45.0% | |
| ATCAATGGGAATCCCATGTG+GGG | + | chr3.2:52992284-52992303 | None:intergenic | 45.0% | |
| ATCCTCCAGATGATCAAGGA+CGG | - | chr3.2:52989080-52989099 | MS.gene04094:CDS | 45.0% | |
| CATCATGCTGCTCAAGACTT+AGG | + | chr3.2:52991675-52991694 | None:intergenic | 45.0% | |
| CCAAAGCAGATGCTGTGATT+AGG | + | chr3.2:52992471-52992490 | None:intergenic | 45.0% | |
| CCTAATCACAGCATCTGCTT+TGG | - | chr3.2:52992468-52992487 | MS.gene04094:CDS | 45.0% | |
| CGAAGATGATTGAGGCGATT+GGG | - | chr3.2:52989435-52989454 | MS.gene04094:CDS | 45.0% | |
| CGTTATCCTCCAGATGATCA+AGG | - | chr3.2:52989076-52989095 | MS.gene04094:CDS | 45.0% | |
| CTCTACTCAACCTTACACTG+AGG | - | chr3.2:52992327-52992346 | MS.gene04094:CDS | 45.0% | |
| GAAGACGTAGACATGAGTGA+AGG | - | chr3.2:52992388-52992407 | MS.gene04094:CDS | 45.0% | |
| GAGAATTAAGGAGGAAACGG+AGG | - | chr3.2:52989292-52989311 | MS.gene04094:CDS | 45.0% | |
| GATCAATGGGAATCCCATGT+GGG | + | chr3.2:52992285-52992304 | None:intergenic | 45.0% | |
| GATTGAAGGTGAGGTTGTTG+AGG | - | chr3.2:52989316-52989335 | MS.gene04094:CDS | 45.0% | |
| GGCAAAACCGCTATTGCAAT+GGG | - | chr3.2:52989149-52989168 | MS.gene04094:CDS | 45.0% | |
| GTGAAATTCGTGCAGAAGTC+AGG | - | chr3.2:52992053-52992072 | MS.gene04094:CDS | 45.0% | |
| TCATGTCTACGTCTTCCTCT+TGG | + | chr3.2:52992384-52992403 | None:intergenic | 45.0% | |
| TCGAGGGATTTCGATGCTAT+GGG | - | chr3.2:52989542-52989561 | MS.gene04094:CDS | 45.0% | |
| TCTGGATATCAGATGCCAAG+AGG | - | chr3.2:52992366-52992385 | MS.gene04094:CDS | 45.0% | |
| TGAAGACGACACCAATGCTA+TGG | - | chr3.2:52992633-52992652 | MS.gene04094:CDS | 45.0% | |
| TGAGGTTCAGATTGATCGTC+CGG | - | chr3.2:52989334-52989353 | MS.gene04094:CDS | 45.0% | |
| TGATGCATCCATTGTGTGCA+TGG | - | chr3.2:52990354-52990373 | MS.gene04094:intron | 45.0% | |
| TGGCAAAACCGCTATTGCAA+TGG | - | chr3.2:52989148-52989167 | MS.gene04094:CDS | 45.0% | |
| TTAGTTGTGGCTACCAACAG+AGG | - | chr3.2:52992226-52992245 | MS.gene04094:CDS | 45.0% | |
| TTTCAGAACGCAGGGATTTC+TGG | - | chr3.2:52992009-52992028 | MS.gene04094:CDS | 45.0% | |
| ! | CAAGCTTTTCGGAAGGCTAT+AGG | - | chr3.2:52989266-52989285 | MS.gene04094:CDS | 45.0% |
| ! | GGAGACGGTTTATGATTTGG+GGG | - | chr3.2:52989412-52989431 | MS.gene04094:CDS | 45.0% |
| !! | AGAGGCATCACAACTATTCG+AGG | - | chr3.2:52992244-52992263 | MS.gene04094:CDS | 45.0% |
| !! | GACCCTTTTTCGTCGAGATT+GGG | - | chr3.2:52991731-52991750 | MS.gene04094:intron | 45.0% |
| !! | TGACCCTTTTTCGTCGAGAT+TGG | - | chr3.2:52991730-52991749 | MS.gene04094:intron | 45.0% |
| !!! | GGATTTCTGGCTCTTTTCAC+CGG | - | chr3.2:52992022-52992041 | MS.gene04094:CDS | 45.0% |
| AACGGAGGTGATTGAAGGTG+AGG | - | chr3.2:52989307-52989326 | MS.gene04094:CDS | 50.0% | |
| AAGCACCCGTGAGACAGTTT+GGG | + | chr3.2:52990926-52990945 | None:intergenic | 50.0% | |
| ACGAATTTCACCCGTGTCAC+CGG | + | chr3.2:52992044-52992063 | None:intergenic | 50.0% | |
| ACTCCTTTCGCCATGATTGC+TGG | - | chr3.2:52989197-52989216 | MS.gene04094:CDS | 50.0% | |
| ATGGGAATGGCGAAATCCCT+CGG | - | chr3.2:52989167-52989186 | MS.gene04094:CDS | 50.0% | |
| CACTGCACAAACTTCACCTG+AGG | + | chr3.2:52989569-52989588 | None:intergenic | 50.0% | |
| CATCCATTGTGTGCATGGTG+AGG | - | chr3.2:52990359-52990378 | MS.gene04094:intron | 50.0% | |
| CGAGGGATTTCGATGCTATG+GGG | - | chr3.2:52989543-52989562 | MS.gene04094:CDS | 50.0% | |
| CGCCATTCCCATTGCAATAG+CGG | + | chr3.2:52989159-52989178 | None:intergenic | 50.0% | |
| CTACCAGCAATCATGGCGAA+AGG | + | chr3.2:52989203-52989222 | None:intergenic | 50.0% | |
| CTACCTCACCATGCACACAA+TGG | + | chr3.2:52990365-52990384 | None:intergenic | 50.0% | |
| CTCAAGACTTAGGGCTGACT+TGG | + | chr3.2:52991665-52991684 | None:intergenic | 50.0% | |
| CTCTTCTGCAACTCACCATC+AGG | + | chr3.2:52989593-52989612 | None:intergenic | 50.0% | |
| GAAAGGAGTCTCAAGACCGA+GGG | + | chr3.2:52989186-52989205 | None:intergenic | 50.0% | |
| GAAGGAGAAAGTGACGAGTG+GGG | - | chr3.2:52989457-52989476 | MS.gene04094:CDS | 50.0% | |
| GAAGTCGACAGAGATGGAGA+CGG | - | chr3.2:52989397-52989416 | MS.gene04094:CDS | 50.0% | |
| GACGTTGAAGTCGACAGAGA+TGG | - | chr3.2:52989391-52989410 | MS.gene04094:CDS | 50.0% | |
| GAGGAAACGGAGGTGATTGA+AGG | - | chr3.2:52989302-52989321 | MS.gene04094:CDS | 50.0% | |
| GATCATCTGGAGGATAACGC+CGG | + | chr3.2:52989075-52989094 | None:intergenic | 50.0% | |
| GATGATTGAGGCGATTGGGA+AGG | - | chr3.2:52989439-52989458 | MS.gene04094:CDS | 50.0% | |
| GCGAAGATGATTGAGGCGAT+TGG | - | chr3.2:52989434-52989453 | MS.gene04094:CDS | 50.0% | |
| GGAAGGAGAAAGTGACGAGT+GGG | - | chr3.2:52989456-52989475 | MS.gene04094:CDS | 50.0% | |
| GTCGAGGGATTTCGATGCTA+TGG | - | chr3.2:52989541-52989560 | MS.gene04094:CDS | 50.0% | |
| GTGGCAGAGTGGAAAGAAGA+AGG | - | chr3.2:52992094-52992113 | MS.gene04094:CDS | 50.0% | |
| GTTCTCCCAAACTGTCTCAC+GGG | - | chr3.2:52990918-52990937 | MS.gene04094:intron | 50.0% | |
| TAAGCACCCGTGAGACAGTT+TGG | + | chr3.2:52990927-52990946 | None:intergenic | 50.0% | |
| TACCGTCCTTGATCATCTGG+AGG | + | chr3.2:52989085-52989104 | None:intergenic | 50.0% | |
| TCCGGGAAGATTACGAAGCT+CGG | - | chr3.2:52989503-52989522 | MS.gene04094:CDS | 50.0% | |
| TGACCCATTGTTGCCGAGAT+CGG | - | chr3.2:52990464-52990483 | MS.gene04094:intron | 50.0% | |
| TGAGTTGCAGAAGAGGAAGG+AGG | - | chr3.2:52989598-52989617 | MS.gene04094:intron | 50.0% | |
| TGGTGAGTTGCAGAAGAGGA+AGG | - | chr3.2:52989595-52989614 | MS.gene04094:intron | 50.0% | |
| TTCATTCCTCAATCGGGCTC+TGG | - | chr3.2:52992183-52992202 | MS.gene04094:CDS | 50.0% | |
| TTGACACGAAAGTGGCAGAG+TGG | - | chr3.2:52992083-52992102 | MS.gene04094:CDS | 50.0% | |
| TTTGGGGGCGAAGATGATTG+AGG | - | chr3.2:52989427-52989446 | MS.gene04094:CDS | 50.0% | |
| ! | ATAGCGGTTTTGCCAGTACC+TGG | + | chr3.2:52989143-52989162 | None:intergenic | 50.0% |
| ! | CTGATGGTGAGTTGCAGAAG+AGG | - | chr3.2:52989591-52989610 | MS.gene04094:intron | 50.0% |
| !! | TGGTAGTGAGCTTTTCTCGC+TGG | - | chr3.2:52989217-52989236 | MS.gene04094:CDS | 50.0% |
| AAGTGGCCACATCATGCTGC+TGG | - | chr3.2:52991039-52991058 | MS.gene04094:intron | 55.0% | |
| AGACTTGCCAATGGTGGCCT+TGG | - | chr3.2:52990394-52990413 | MS.gene04094:intron | 55.0% | |
| AGTGGCCACATCATGCTGCT+GGG | - | chr3.2:52991040-52991059 | MS.gene04094:intron | 55.0% | |
| ATGCTACCCAAGGCCACCAT+TGG | + | chr3.2:52990404-52990423 | None:intergenic | 55.0% | |
| CATTCTCCAGAGCCCGATTG+AGG | + | chr3.2:52992192-52992211 | None:intergenic | 55.0% | |
| CCCGAGCTTCGTAATCTTCC+CGG | + | chr3.2:52989507-52989526 | None:intergenic | 55.0% | |
| CCGGGAAGATTACGAAGCTC+GGG | - | chr3.2:52989504-52989523 | MS.gene04094:CDS | 55.0% | |
| CGAAAGGAGTCTCAAGACCG+AGG | + | chr3.2:52989187-52989206 | None:intergenic | 55.0% | |
| CTAAGGAAGAGTCGAGACCG+AGG | + | chr3.2:52988998-52989017 | None:intergenic | 55.0% | |
| CTCCCGATCTCGGCAACAAT+GGG | + | chr3.2:52990470-52990489 | None:intergenic | 55.0% | |
| GACCCATTGTTGCCGAGATC+GGG | - | chr3.2:52990465-52990484 | MS.gene04094:intron | 55.0% | |
| GACTTGCCAATGGTGGCCTT+GGG | - | chr3.2:52990395-52990414 | MS.gene04094:intron | 55.0% | |
| GGAAAGGCAGAGATTGTGCC+TGG | - | chr3.2:52992115-52992134 | MS.gene04094:CDS | 55.0% | |
| GGGAAGGAGAAAGTGACGAG+TGG | - | chr3.2:52989455-52989474 | MS.gene04094:CDS | 55.0% | |
| GGTTCAGATTGATCGTCCGG+CGG | - | chr3.2:52989337-52989356 | MS.gene04094:CDS | 55.0% | |
| GTTGCAGAAGAGGAAGGAGG+TGG | - | chr3.2:52989601-52989620 | MS.gene04094:intron | 55.0% | |
| TCGACGAAAAAGGGTCAGCG+AGG | + | chr3.2:52991727-52991746 | None:intergenic | 55.0% | |
| TCGGCAACAATGGGTCAGCA+AGG | + | chr3.2:52990461-52990480 | None:intergenic | 55.0% | |
| TCTCCCGATCTCGGCAACAA+TGG | + | chr3.2:52990471-52990490 | None:intergenic | 55.0% | |
| TGTGTCCCAGCAGCATGATG+TGG | + | chr3.2:52991048-52991067 | None:intergenic | 55.0% | |
| TTTCGATGCTATGGGGCCTC+AGG | - | chr3.2:52989550-52989569 | MS.gene04094:intron | 55.0% | |
| TTTGCCAGTACCTGGCTGAC+CGG | + | chr3.2:52989135-52989154 | None:intergenic | 55.0% | |
| ! | AATGGTGGCCTTGGGTAGCA+TGG | - | chr3.2:52990403-52990422 | MS.gene04094:intron | 55.0% |
| ! | AGCTCGGGAGATCGTTTTCG+CGG | - | chr3.2:52989519-52989538 | MS.gene04094:CDS | 55.0% |
| ! | GAGATCGTTTTCGCGGTCGA+GGG | - | chr3.2:52989526-52989545 | MS.gene04094:CDS | 55.0% |
| ! | GCTCTTTTCACCGGTGACAC+GGG | - | chr3.2:52992031-52992050 | MS.gene04094:CDS | 55.0% |
| ! | GGCTCTTTTCACCGGTGACA+CGG | - | chr3.2:52992030-52992049 | MS.gene04094:CDS | 55.0% |
| CATCTGGAGGATAACGCCGG+CGG | + | chr3.2:52989072-52989091 | None:intergenic | 60.0% | |
| CGGCTTTACGAGCGGAGACT+TGG | + | chr3.2:52989052-52989071 | None:intergenic | 60.0% | |
| CTAACGCGCATAGAGCGCGT+GGG | - | chr3.2:52988951-52988970 | MS.gene04094:CDS | 60.0% | |
| CTCTATGCGCGTTAGGTCGC+GGG | + | chr3.2:52988946-52988965 | None:intergenic | 60.0% | |
| GACTTGGCCGACCATGCCTT+CGG | + | chr3.2:52989036-52989055 | None:intergenic | 60.0% | |
| GCACTCGCTTCTCCCGATCT+CGG | + | chr3.2:52990480-52990499 | None:intergenic | 60.0% | |
| GCTCTATGCGCGTTAGGTCG+CGG | + | chr3.2:52988947-52988966 | None:intergenic | 60.0% | |
| GGAGCACACTCACACATCCG+CGG | - | chr3.2:52988972-52988991 | MS.gene04094:CDS | 60.0% | |
| TCAGATTGATCGTCCGGCGG+TGG | - | chr3.2:52989340-52989359 | MS.gene04094:CDS | 60.0% | |
| ! | GGAGATCGTTTTCGCGGTCG+AGG | - | chr3.2:52989525-52989544 | MS.gene04094:CDS | 60.0% |
| AACGCCGGCGGCTTTACGAG+CGG | + | chr3.2:52989060-52989079 | None:intergenic | 65.0% | |
| AAGAGTCGAGACCGAGGCCG+CGG | + | chr3.2:52988992-52989011 | None:intergenic | 65.0% | |
| ATTGATCGTCCGGCGGTGGC+TGG | - | chr3.2:52989344-52989363 | MS.gene04094:CDS | 65.0% | |
| CACTCACACATCCGCGGCCT+CGG | - | chr3.2:52988978-52988997 | MS.gene04094:CDS | 65.0% | |
| CCACGCGCTCTATGCGCGTT+AGG | + | chr3.2:52988953-52988972 | None:intergenic | 65.0% | |
| CCTAACGCGCATAGAGCGCG+TGG | - | chr3.2:52988950-52988969 | MS.gene04094:CDS | 65.0% | |
| GCCGACCATGCCTTCGGAGA+CGG | + | chr3.2:52989030-52989049 | None:intergenic | 65.0% | |
| GTCTCCGCTCGTAAAGCCGC+CGG | - | chr3.2:52989053-52989072 | MS.gene04094:CDS | 65.0% | |
| ! | GCCGTCTCCGAAGGCATGGT+CGG | - | chr3.2:52989026-52989045 | MS.gene04094:CDS | 65.0% |
| ! | GGTGGCCTTGGGTAGCATGG+TGG | - | chr3.2:52990406-52990425 | MS.gene04094:intron | 65.0% |
| ACGCGCCGTCTCCGAAGGCA+TGG | - | chr3.2:52989022-52989041 | MS.gene04094:CDS | 70.0% | |
| ATGCCTTCGGAGACGGCGCG+TGG | + | chr3.2:52989023-52989042 | None:intergenic | 70.0% | |
| CAGTACCTGGCTGACCGGCG+AGG | + | chr3.2:52989130-52989149 | None:intergenic | 70.0% | |
| CTCGCCGGTCAGCCAGGTAC+TGG | - | chr3.2:52989128-52989147 | MS.gene04094:CDS | 70.0% | |
| CTGGAGCTGCGGCGAAGACG+GGG | - | chr3.2:52989363-52989382 | MS.gene04094:CDS | 70.0% | |
| GCTGGAGCTGCGGCGAAGAC+GGG | - | chr3.2:52989362-52989381 | MS.gene04094:CDS | 70.0% | |
| GGACGCGCTGTTCTCCTCGC+CGG | - | chr3.2:52989113-52989132 | MS.gene04094:CDS | 70.0% | |
| GGCGAGGAGAACAGCGCGTC+CGG | + | chr3.2:52989114-52989133 | None:intergenic | 70.0% | |
| GGCTGGAGCTGCGGCGAAGA+CGG | - | chr3.2:52989361-52989380 | MS.gene04094:CDS | 70.0% | |
| GTTCTCCTCGCCGGTCAGCC+AGG | - | chr3.2:52989122-52989141 | MS.gene04094:CDS | 70.0% | |
| ! | GGAGACGGCGCGTGGCTCTA+AGG | + | chr3.2:52989015-52989034 | None:intergenic | 70.0% |
| GAGCCACGCGCCGTCTCCGA+AGG | - | chr3.2:52989017-52989036 | MS.gene04094:CDS | 75.0% | |
| TCCGGCGGTGGCTGGAGCTG+CGG | - | chr3.2:52989352-52989371 | MS.gene04094:CDS | 75.0% | |
| ! | GCCGCAGCTCCAGCCACCGC+CGG | + | chr3.2:52989356-52989375 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 52988918 | 52992663 | 52988918 | ID=MS.gene04094 |
| chr3.2 | mRNA | 52988918 | 52992663 | 52988918 | ID=MS.gene04094.t1;Parent=MS.gene04094 |
| chr3.2 | exon | 52991915 | 52992663 | 52991915 | ID=MS.gene04094.t1.exon1;Parent=MS.gene04094.t1 |
| chr3.2 | CDS | 52991915 | 52992663 | 52991915 | ID=cds.MS.gene04094.t1;Parent=MS.gene04094.t1 |
| chr3.2 | exon | 52988918 | 52989566 | 52988918 | ID=MS.gene04094.t1.exon2;Parent=MS.gene04094.t1 |
| chr3.2 | CDS | 52988918 | 52989566 | 52988918 | ID=cds.MS.gene04094.t1;Parent=MS.gene04094.t1 |
| Gene Sequence |
| Protein sequence |
