Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37440.t1 | XP_003603117.1 | 99.8 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 7.20E-252 | 879.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37440.t1 | Q9FMR9 | 90.2 | 458 | 45 | 0 | 1 | 458 | 1 | 458 | 4.2e-232 | 805.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37440.t1 | G7J7J7 | 99.8 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 5.2e-252 | 879.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055437 | MS.gene37440 | PPI |
| MS.gene90097 | MS.gene37440 | PPI |
| MS.gene60517 | MS.gene37440 | PPI |
| MS.gene68085 | MS.gene37440 | PPI |
| MS.gene84545 | MS.gene37440 | PPI |
| MS.gene04094 | MS.gene37440 | PPI |
| MS.gene37440 | MS.gene09988 | PPI |
| MS.gene046177 | MS.gene37440 | PPI |
| MS.gene90906 | MS.gene37440 | PPI |
| MS.gene022650 | MS.gene37440 | PPI |
| MS.gene37440 | MS.gene04400 | PPI |
| MS.gene37440 | MS.gene037838 | PPI |
| MS.gene74260 | MS.gene37440 | PPI |
| MS.gene005792 | MS.gene37440 | PPI |
| MS.gene37440 | MS.gene08084 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37440.t1 | MTR_3g104080 | 99.782 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 0.0 | 929 |
| MS.gene37440.t1 | MTR_6g023370 | 91.648 | 455 | 16 | 2 | 4 | 458 | 1 | 433 | 0.0 | 827 |
| MS.gene37440.t1 | MTR_3g104080 | 100.000 | 360 | 0 | 0 | 99 | 458 | 1 | 360 | 0.0 | 731 |
| MS.gene37440.t1 | MTR_3g061640 | 44.421 | 466 | 232 | 7 | 1 | 457 | 1 | 448 | 1.64e-120 | 360 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37440.t1 | AT5G22330 | 90.175 | 458 | 45 | 0 | 1 | 458 | 1 | 458 | 0.0 | 850 |
| MS.gene37440.t1 | AT3G49830 | 42.048 | 459 | 254 | 5 | 1 | 457 | 1 | 449 | 3.51e-120 | 359 |
| MS.gene37440.t1 | AT5G67630 | 43.777 | 466 | 235 | 7 | 1 | 457 | 1 | 448 | 1.49e-119 | 358 |
Find 130 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAATTTGTTCACTTTATT+TGG | 0.114144 | 3.4:-91303476 | MS.gene37440:CDS |
| CCTTGCCAGCCATCTTCTTC+TGG | 0.261287 | 3.4:+91307416 | None:intergenic |
| GGCTATCGGTCTACGTATTA+AGG | 0.266184 | 3.4:-91307159 | MS.gene37440:CDS |
| GCTACTCACACTCACATTAA+AGG | 0.267682 | 3.4:-91307783 | MS.gene37440:CDS |
| AGTATCAGCCATGTGATAAT+TGG | 0.271135 | 3.4:-91306923 | MS.gene37440:CDS |
| AATGCAGTCTTTCCGGTTCC+AGG | 0.283045 | 3.4:+91307373 | None:intergenic |
| TGGCATACCTGTTGACCTAT+TGG | 0.318630 | 3.4:-91303984 | MS.gene37440:CDS |
| TGTTATACTCTCAGTTTCTT+CGG | 0.319337 | 3.4:+91306961 | None:intergenic |
| AAGTGCTAATGCAGTCTTTC+CGG | 0.320842 | 3.4:+91307366 | None:intergenic |
| TCTACGTATTAAGGAAAATA+AGG | 0.329275 | 3.4:-91307150 | MS.gene37440:CDS |
| AAAGAAGACCGAGGTTCTTA+TGG | 0.330990 | 3.4:-91307195 | MS.gene37440:CDS |
| GGATGTAACCCTACATGATT+TGG | 0.331586 | 3.4:-91305149 | MS.gene37440:CDS |
| TTTGTGGCAAAGATTACTAT+TGG | 0.345084 | 3.4:+91304372 | None:intergenic |
| GTTATACTCTCAGTTTCTTC+GGG | 0.346912 | 3.4:+91306962 | None:intergenic |
| TTAGCTTTCCTTGGGGAGAT+TGG | 0.351825 | 3.4:-91303761 | MS.gene37440:CDS |
| CGGTCCAGCTGAAATAATTC+AGG | 0.353377 | 3.4:-91303930 | MS.gene37440:intron |
| TCTTCCTAGGTTTCATCATC+TGG | 0.372923 | 3.4:+91305074 | None:intergenic |
| GTTGTCTCTGCCATTTATCT+TGG | 0.373972 | 3.4:+91303607 | None:intergenic |
| GTTGAGACAAGAAATTAATA+AGG | 0.382068 | 3.4:-91305035 | MS.gene37440:intron |
| GGGGTCCAACTTTAGTTGCT+TGG | 0.386390 | 3.4:+91306880 | None:intergenic |
| AGCGTTGTTGCCAAGATAAA+TGG | 0.390480 | 3.4:-91303617 | MS.gene37440:CDS |
| GAGGAAAGTTTAGCTTTCCT+TGG | 0.401642 | 3.4:-91303770 | MS.gene37440:CDS |
| TTTCTTGTGAACCTCTCCCT+TGG | 0.403331 | 3.4:+91306527 | None:intergenic |
| AGGAAAGTTTAGCTTTCCTT+GGG | 0.411802 | 3.4:-91303769 | MS.gene37440:CDS |
| TTGGGATATGTCAGGAGCTT+GGG | 0.414954 | 3.4:-91307345 | MS.gene37440:CDS |
| AGTGCATATTCCTCTATTTG+TGG | 0.417327 | 3.4:+91304356 | None:intergenic |
| GGCAAGGCACTCCTTCTCGC+CGG | 0.423804 | 3.4:-91307400 | MS.gene37440:CDS |
| GCAAGGCACTCCTTCTCGCC+GGG | 0.424279 | 3.4:-91307399 | MS.gene37440:CDS |
| TTCTTGTGAACCTCTCCCTT+GGG | 0.424676 | 3.4:+91306528 | None:intergenic |
| GAAGAAACTGAGAGTATAAC+AGG | 0.425557 | 3.4:-91306959 | MS.gene37440:CDS |
| TTTACCTGAATTATTTCAGC+TGG | 0.429224 | 3.4:+91303926 | None:intergenic |
| CAAATAGTGGGGCTGTGAAA+AGG | 0.431610 | 3.4:-91306614 | MS.gene37440:CDS |
| ACAGGTGCATATGCTAGATA+TGG | 0.434605 | 3.4:-91304439 | MS.gene37440:intron |
| CAACACCTTCATCGATATAT+CGG | 0.435831 | 3.4:+91304576 | None:intergenic |
| GGTGTTGCAGAACTTGTCCC+TGG | 0.444117 | 3.4:-91304560 | MS.gene37440:CDS |
| AATCGATCCAATAGGTCAAC+AGG | 0.450490 | 3.4:+91303977 | None:intergenic |
| TCAGTGATTTCCGTCTTCCT+AGG | 0.453246 | 3.4:+91305061 | None:intergenic |
| GAGAGTATAACAGGAGGTTA+TGG | 0.453991 | 3.4:-91306950 | MS.gene37440:CDS |
| CTCTAAAGCACGATTAAGAT+AGG | 0.457106 | 3.4:+91304407 | None:intergenic |
| GTAATCTTTGCCACAAATAG+AGG | 0.461084 | 3.4:-91304366 | MS.gene37440:CDS |
| ACACTGTGCAGGTAGCTGTC+GGG | 0.466455 | 3.4:-91306656 | MS.gene37440:intron |
| TTGCTGCTCTTGGAGAAGCT+TGG | 0.474441 | 3.4:+91303438 | None:intergenic |
| GCTGCCAACGCGCGACCTCA+AGG | 0.479841 | 3.4:-91305124 | MS.gene37440:CDS |
| GAACATACTCCTCAGCTTCA+AGG | 0.485334 | 3.4:+91306556 | None:intergenic |
| GTAGGTTCCATTCTGCCCAA+TGG | 0.486511 | 3.4:-91307246 | MS.gene37440:intron |
| TGATCACCAATCGATCCAAT+AGG | 0.490658 | 3.4:+91303969 | None:intergenic |
| TGAACCTCTCCCTTGGGAAG+TGG | 0.494094 | 3.4:+91306534 | None:intergenic |
| ATGCAGTCTTTCCGGTTCCA+GGG | 0.495649 | 3.4:+91307374 | None:intergenic |
| TTGGACAACGGACATCTCTA+AGG | 0.496930 | 3.4:-91303742 | MS.gene37440:intron |
| TGATGCCTTGATCAAGGAAA+AGG | 0.497216 | 3.4:-91306849 | MS.gene37440:intron |
| CATTAAAGGCCTAGGTCTTG+AGG | 0.497845 | 3.4:-91307769 | MS.gene37440:intron |
| AGGAACCAAGCAACTAAAGT+TGG | 0.499343 | 3.4:-91306885 | MS.gene37440:CDS |
| ATATATATTGAGGCAAATAG+TGG | 0.501344 | 3.4:-91306627 | MS.gene37440:CDS |
| AAATAGTGGGGCTGTGAAAA+GGG | 0.503086 | 3.4:-91306613 | MS.gene37440:CDS |
| GTGTTGCAGAACTTGTCCCT+GGG | 0.505714 | 3.4:-91304559 | MS.gene37440:CDS |
| TGCCAACGCGCGACCTCAAG+GGG | 0.510126 | 3.4:-91305122 | MS.gene37440:CDS |
| CTGCCAACGCGCGACCTCAA+GGG | 0.511088 | 3.4:-91305123 | MS.gene37440:CDS |
| GATATATGATGCCTTGATCA+AGG | 0.512614 | 3.4:-91306855 | MS.gene37440:CDS |
| AGTTTCTTCGGGAGAGAGCT+CGG | 0.512821 | 3.4:+91306973 | None:intergenic |
| GTTCCATTCTGCCCAATGGT+TGG | 0.513570 | 3.4:-91307242 | MS.gene37440:CDS |
| CTTGGGATATGTCAGGAGCT+TGG | 0.517088 | 3.4:-91307346 | MS.gene37440:CDS |
| AACAGGTATGCCATGAGGAC+TGG | 0.517649 | 3.4:+91303994 | None:intergenic |
| GAAAATAAGGAAGTATATGA+AGG | 0.518525 | 3.4:-91307137 | MS.gene37440:CDS |
| TATATATTGAGGCAAATAGT+GGG | 0.524529 | 3.4:-91306626 | MS.gene37440:CDS |
| ATTAGCACTTGGGATATGTC+AGG | 0.527405 | 3.4:-91307353 | MS.gene37440:CDS |
| ATAGAGGAATATGCACTGTA+AGG | 0.528143 | 3.4:-91304350 | MS.gene37440:intron |
| CCCACAAACCCAGAAGCAAA+AGG | 0.531554 | 3.4:+91307487 | None:intergenic |
| GAACCAACCATTGGGCAGAA+TGG | 0.533082 | 3.4:+91307239 | None:intergenic |
| ATACTTCTGAACCAACCATT+GGG | 0.533730 | 3.4:+91307231 | None:intergenic |
| CACACTGTGCAGGTAGCTGT+CGG | 0.538379 | 3.4:-91306657 | MS.gene37440:intron |
| TGGGTTTGTGGGACAAGCTG+AGG | 0.538586 | 3.4:-91307476 | MS.gene37440:CDS |
| ATCTTGGCAACAACGCTCGC+AGG | 0.542251 | 3.4:+91303623 | None:intergenic |
| CGGGGATGTTATATATATTG+AGG | 0.543594 | 3.4:-91306637 | MS.gene37440:CDS |
| GGAAAGACTGCATTAGCACT+TGG | 0.544549 | 3.4:-91307364 | MS.gene37440:CDS |
| GGAGAAGATGAAAATTGAAG+AGG | 0.545555 | 3.4:-91307835 | MS.gene37440:CDS |
| ATCAAGGCATCATATATCGT+GGG | 0.547921 | 3.4:+91306860 | None:intergenic |
| CCAGAAGAAGATGGCTGGCA+AGG | 0.548161 | 3.4:-91307416 | MS.gene37440:CDS |
| TGCAGTCTTTCCGGTTCCAG+GGG | 0.550380 | 3.4:+91307375 | None:intergenic |
| TATACTTCTGAACCAACCAT+TGG | 0.554977 | 3.4:+91307230 | None:intergenic |
| GTCAACCGATATATCGATGA+AGG | 0.558745 | 3.4:-91304581 | MS.gene37440:CDS |
| TGTTGACCTATTGGATCGAT+TGG | 0.564185 | 3.4:-91303975 | MS.gene37440:CDS |
| ATGTCAGGAGCTTGGGACCA+AGG | 0.564237 | 3.4:-91307338 | MS.gene37440:intron |
| CATGATACGCCAGAAGAAGA+TGG | 0.565068 | 3.4:-91307425 | MS.gene37440:CDS |
| TCGTCAATAAACAGAACCCC+AGG | 0.567100 | 3.4:+91304542 | None:intergenic |
| ATTGGATTGAAGACAGTGAA+AGG | 0.567859 | 3.4:-91306905 | MS.gene37440:CDS |
| CAAGTTCCTCCACTTGAGCT+CGG | 0.568699 | 3.4:+91303801 | None:intergenic |
| TGGCAGCATCCAAATCATGT+AGG | 0.570363 | 3.4:+91305140 | None:intergenic |
| TGGGGTTCTGTTTATTGACG+AGG | 0.574623 | 3.4:-91304540 | MS.gene37440:intron |
| ACTGATATGACCAGTCCTCA+TGG | 0.575171 | 3.4:-91304004 | MS.gene37440:CDS |
| GGCAGCATCCAAATCATGTA+GGG | 0.577366 | 3.4:+91305141 | None:intergenic |
| AATTATTTCAGCTGGACCGT+AGG | 0.577744 | 3.4:+91303934 | None:intergenic |
| TGTTCCACTTCCCAAGGGAG+AGG | 0.578685 | 3.4:-91306538 | MS.gene37440:CDS |
| GGAGGAACTTGCTGTGGATG+AGG | 0.580534 | 3.4:-91303789 | MS.gene37440:CDS |
| CACTGTGCAGGTAGCTGTCG+GGG | 0.583392 | 3.4:-91306655 | MS.gene37440:intron |
| ATACGCCAGAAGAAGATGGC+TGG | 0.584035 | 3.4:-91307421 | MS.gene37440:CDS |
| AAGAGAAGCGTGTGGCCTTG+TGG | 0.587053 | 3.4:-91307452 | MS.gene37440:CDS |
| GAAAGACTGCATTAGCACTT+GGG | 0.592181 | 3.4:-91307363 | MS.gene37440:CDS |
| TGAGTTTGACCTTGAAGCTG+AGG | 0.593567 | 3.4:-91306565 | MS.gene37440:CDS |
| AGTGGGGCTGTGAAAAGGGT+TGG | 0.593627 | 3.4:-91306609 | MS.gene37440:CDS |
| GGAGTATGTTCCACTTCCCA+AGG | 0.593628 | 3.4:-91306544 | MS.gene37440:CDS |
| CACACTCACATTAAAGGCCT+AGG | 0.594901 | 3.4:-91307777 | MS.gene37440:CDS |
| TCTAGCTATCCGAGCTCAAG+TGG | 0.596118 | 3.4:-91303810 | MS.gene37440:CDS |
| TGGGCCAGATGATGAAACCT+AGG | 0.605557 | 3.4:-91305078 | MS.gene37440:CDS |
| GATCAAGGCATCATATATCG+TGG | 0.609216 | 3.4:+91306859 | None:intergenic |
| GATGATGAAACCTAGGAAGA+CGG | 0.610580 | 3.4:-91305071 | MS.gene37440:CDS |
| ATCATTCGAACACAAACCTA+CGG | 0.612451 | 3.4:-91303950 | MS.gene37440:CDS |
| GAGAACAAACCTCAAGACCT+AGG | 0.613415 | 3.4:+91307760 | None:intergenic |
| GGCGTATCATGTCGACCACA+AGG | 0.614191 | 3.4:+91307437 | None:intergenic |
| TAAGGAAGTATATGAAGGCG+AGG | 0.615764 | 3.4:-91307132 | MS.gene37440:intron |
| TCAAGTGGAGGAACTTGCTG+TGG | 0.623698 | 3.4:-91303795 | MS.gene37440:CDS |
| CCAACGCGCGACCTCAAGGG+GGG | 0.640330 | 3.4:-91305120 | MS.gene37440:CDS |
| TCCGTTGTCCAATCTCCCCA+AGG | 0.641969 | 3.4:+91303753 | None:intergenic |
| TGTTGCAGAACTTGTCCCTG+GGG | 0.644580 | 3.4:-91304558 | MS.gene37440:CDS |
| AGCTATCCGAGCTCAAGTGG+AGG | 0.646357 | 3.4:-91303807 | MS.gene37440:CDS |
| CAGTAGCAAAAGCATCACTT+CGG | 0.650349 | 3.4:+91306586 | None:intergenic |
| GCCAACGCGCGACCTCAAGG+GGG | 0.651411 | 3.4:-91305121 | MS.gene37440:CDS |
| TCTTCAATCCAATTATCACA+TGG | 0.652745 | 3.4:+91306915 | None:intergenic |
| TGGCAGAGACAACATCTGCA+AGG | 0.661224 | 3.4:-91303597 | MS.gene37440:intron |
| TCCTTGGGGAGATTGGACAA+CGG | 0.674974 | 3.4:-91303754 | MS.gene37440:CDS |
| TGGTTCAGAAGTATACTCAA+CGG | 0.677153 | 3.4:-91307222 | MS.gene37440:CDS |
| GAGTATGTTCCACTTCCCAA+GGG | 0.680518 | 3.4:-91306543 | MS.gene37440:CDS |
| GCAGTCTTTCCGGTTCCAGG+GGG | 0.687329 | 3.4:+91307376 | None:intergenic |
| ATATATTGAGGCAAATAGTG+GGG | 0.693226 | 3.4:-91306625 | MS.gene37440:CDS |
| GGAAAGTTTAGCTTTCCTTG+GGG | 0.696347 | 3.4:-91303768 | MS.gene37440:CDS |
| TCAAGGCATCATATATCGTG+GGG | 0.702794 | 3.4:+91306861 | None:intergenic |
| CGTCAATAAACAGAACCCCA+GGG | 0.715606 | 3.4:+91304543 | None:intergenic |
| GCTGAGGCAAGAGAAGCGTG+TGG | 0.722369 | 3.4:-91307460 | MS.gene37440:CDS |
| GAAACTGAGAGTATAACAGG+AGG | 0.727490 | 3.4:-91306956 | MS.gene37440:CDS |
| AGGTCAACAGGTATGCCATG+AGG | 0.729642 | 3.4:+91303989 | None:intergenic |
| AACGGAAGTAAAGAAGACCG+AGG | 0.771401 | 3.4:-91307204 | MS.gene37440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATAAAATAAAGCTT+AGG | - | chr3.4:91305009-91305028 | MS.gene37440:intron | 10.0% |
| !! | CATGATAAAAATAATTAAAA+TGG | + | chr3.4:91307191-91307210 | None:intergenic | 10.0% |
| !! | TTCATTTATTAAAATGAAAT+TGG | - | chr3.4:91306540-91306559 | MS.gene37440:CDS | 10.0% |
| !!! | TTTGTTTTATACTTTTATTT+GGG | - | chr3.4:91304493-91304512 | MS.gene37440:intron | 10.0% |
| !!! | TTTTAAATCTATACAAATAT+TGG | - | chr3.4:91304539-91304558 | MS.gene37440:intron | 10.0% |
| !!! | TTTTGTTTTATACTTTTATT+TGG | - | chr3.4:91304492-91304511 | MS.gene37440:intron | 10.0% |
| !! | GAAAAAAACTTATTAAATTG+AGG | + | chr3.4:91303525-91303544 | None:intergenic | 15.0% |
| !!! | TCATTTTTAATTTATGTTTC+TGG | - | chr3.4:91305626-91305645 | MS.gene37440:intron | 15.0% |
| !!! | TTTATTTTTTTTGTTCTCAA+AGG | - | chr3.4:91306087-91306106 | MS.gene37440:intron | 15.0% |
| !! | AAAAGTTTCTTAACACAAAA+TGG | - | chr3.4:91307128-91307147 | MS.gene37440:intron | 20.0% |
| !! | AAACATTAAGCAAATTTCTA+TGG | - | chr3.4:91305954-91305973 | MS.gene37440:intron | 20.0% |
| !! | ACATCACATGAATATAATAA+TGG | + | chr3.4:91304787-91304806 | None:intergenic | 20.0% |
| !! | GTAAATTATATTTGAATCCT+TGG | - | chr3.4:91304828-91304847 | MS.gene37440:intron | 20.0% |
| !! | GTTTAAATAAAATTTGTCAG+AGG | - | chr3.4:91306001-91306020 | MS.gene37440:intron | 20.0% |
| !! | GTTTAATTGTTTAACTAGAA+GGG | - | chr3.4:91306269-91306288 | MS.gene37440:intron | 20.0% |
| !! | TGTTTAATTGTTTAACTAGA+AGG | - | chr3.4:91306268-91306287 | MS.gene37440:intron | 20.0% |
| !! | TTTAATTGTTTAACTAGAAG+GGG | - | chr3.4:91306270-91306289 | MS.gene37440:intron | 20.0% |
| !!! | AAGTTTTTTTGATGTGATTT+TGG | - | chr3.4:91304246-91304265 | MS.gene37440:intron | 20.0% |
| !!! | AATAAATTTTGATTGTCCTT+GGG | - | chr3.4:91306493-91306512 | MS.gene37440:intron | 20.0% |
| !!! | ATTCTTTTCTCTTTTTTGAA+AGG | - | chr3.4:91304446-91304465 | MS.gene37440:intron | 20.0% |
| !!! | CACTTTTTAAATTTCTGTTT+AGG | - | chr3.4:91305715-91305734 | MS.gene37440:intron | 20.0% |
| !!! | TAGAATACAAGAATGATTTT+TGG | + | chr3.4:91303952-91303971 | None:intergenic | 20.0% |
| !!! | TGAAATTTGTTCACTTTATT+TGG | - | chr3.4:91307781-91307800 | MS.gene37440:CDS | 20.0% |
| !!! | TTATGTTACCTTTTTTCATT+TGG | - | chr3.4:91306425-91306444 | MS.gene37440:intron | 20.0% |
| !!! | TTTTATACTTTTATTTGGGT+GGG | - | chr3.4:91304497-91304516 | MS.gene37440:intron | 20.0% |
| !!! | TTTTATTTTTTTCAGAGCTA+AGG | + | chr3.4:91305001-91305020 | None:intergenic | 20.0% |
| ! | AAAACCAGTGTTATAAATAG+CGG | + | chr3.4:91305879-91305898 | None:intergenic | 25.0% |
| ! | AAGAAATAAGCAAAAGGATT+TGG | + | chr3.4:91303653-91303672 | None:intergenic | 25.0% |
| ! | AATCTCATTTCTTAGATTGT+TGG | + | chr3.4:91306458-91306477 | None:intergenic | 25.0% |
| ! | AGCATTAGAACTTCATTAAA+TGG | + | chr3.4:91306793-91306812 | None:intergenic | 25.0% |
| ! | ATATATATTGAGGCAAATAG+TGG | - | chr3.4:91304630-91304649 | MS.gene37440:intron | 25.0% |
| ! | ATTAAGACCTCAAAAATGAT+GGG | + | chr3.4:91307018-91307037 | None:intergenic | 25.0% |
| ! | ATTTATTTATACCGCTTTGT+AGG | - | chr3.4:91303993-91304012 | MS.gene37440:CDS | 25.0% |
| ! | ATTTGTGTATGTATAGAGAA+TGG | - | chr3.4:91305076-91305095 | MS.gene37440:CDS | 25.0% |
| ! | CTATACCACTATTACATATA+GGG | - | chr3.4:91305327-91305346 | MS.gene37440:intron | 25.0% |
| ! | GAAATAATTCAGGTAAATGA+TGG | - | chr3.4:91307337-91307356 | MS.gene37440:intron | 25.0% |
| ! | GTTGAGACAAGAAATTAATA+AGG | - | chr3.4:91306222-91306241 | MS.gene37440:intron | 25.0% |
| ! | GTTTACAAAAATGCTTATGT+TGG | - | chr3.4:91306644-91306663 | MS.gene37440:CDS | 25.0% |
| ! | TAAATAAAATTTGTCAGAGG+AGG | - | chr3.4:91306004-91306023 | MS.gene37440:intron | 25.0% |
| ! | TAGCAACTCAATTAGTTAAA+GGG | + | chr3.4:91307732-91307751 | None:intergenic | 25.0% |
| ! | TATATATTGAGGCAAATAGT+GGG | - | chr3.4:91304631-91304650 | MS.gene37440:intron | 25.0% |
| ! | TATATGTAATAGTGGTATAG+CGG | + | chr3.4:91305327-91305346 | None:intergenic | 25.0% |
| ! | TCTACGTATTAAGGAAAATA+AGG | - | chr3.4:91304107-91304126 | MS.gene37440:intron | 25.0% |
| !! | AAAATAAAATAGTGCTGAGT+TGG | - | chr3.4:91305470-91305489 | MS.gene37440:intron | 25.0% |
| !! | AAAATTTTCCATAAGAACCT+CGG | + | chr3.4:91304073-91304092 | None:intergenic | 25.0% |
| !! | ATAAATTGCAGGCTTTAATT+AGG | + | chr3.4:91306765-91306784 | None:intergenic | 25.0% |
| !! | CAAGATATTTTGTCTCTTAT+GGG | - | chr3.4:91306160-91306179 | MS.gene37440:intron | 25.0% |
| !! | GAAAATAAGGAAGTATATGA+AGG | - | chr3.4:91304120-91304139 | MS.gene37440:intron | 25.0% |
| !! | GTTTTCTTCCAAATGAAAAA+AGG | + | chr3.4:91306436-91306455 | None:intergenic | 25.0% |
| !! | TAAATTGCAGGCTTTAATTA+GGG | + | chr3.4:91306764-91306783 | None:intergenic | 25.0% |
| !! | TATTTCTCATATCGGATTTT+TGG | - | chr3.4:91305832-91305851 | MS.gene37440:intron | 25.0% |
| !! | TTCTTATGGAAAATTTTCGA+CGG | - | chr3.4:91304076-91304095 | MS.gene37440:intron | 25.0% |
| !!! | AGCTTAGGATATAATTTGTT+TGG | - | chr3.4:91305024-91305043 | MS.gene37440:intron | 25.0% |
| !!! | ATTGACTGTTTTTTTTACAG+AGG | - | chr3.4:91307229-91307248 | MS.gene37440:CDS | 25.0% |
| !!! | CAATAAATTTTGATTGTCCT+TGG | - | chr3.4:91306492-91306511 | MS.gene37440:intron | 25.0% |
| !!! | GCTTAGGATATAATTTGTTT+GGG | - | chr3.4:91305025-91305044 | MS.gene37440:intron | 25.0% |
| !!! | GTTTTATACTTTTATTTGGG+TGG | - | chr3.4:91304496-91304515 | MS.gene37440:intron | 25.0% |
| !!! | GTTTTGTTTGAAGTTGATAA+TGG | - | chr3.4:91304922-91304941 | MS.gene37440:intron | 25.0% |
| !!! | TATGTGTTGTTTATCATATC+AGG | - | chr3.4:91307590-91307609 | MS.gene37440:intron | 25.0% |
| !!! | TTGACTGTTTTTTTTACAGA+GGG | - | chr3.4:91307230-91307249 | MS.gene37440:CDS | 25.0% |
| AAAATATGTAGCAGACAAAG+TGG | + | chr3.4:91304218-91304237 | None:intergenic | 30.0% | |
| AAATCCGATATGAGAAATAG+CGG | + | chr3.4:91305831-91305850 | None:intergenic | 30.0% | |
| AAATGGATGCAATAAATTGC+AGG | + | chr3.4:91306776-91306795 | None:intergenic | 30.0% | |
| AAGAATAACTATTATGCCCA+AGG | + | chr3.4:91306512-91306531 | None:intergenic | 30.0% | |
| ACATACACAAATAGTTGTAC+CGG | + | chr3.4:91305068-91305087 | None:intergenic | 30.0% | |
| ACATATAAGTCACATACGAA+AGG | + | chr3.4:91307575-91307594 | None:intergenic | 30.0% | |
| ACCTTACTAGAAGAAAAGTA+CGG | + | chr3.4:91305983-91306002 | None:intergenic | 30.0% | |
| ACTAAATAGCATCTTCATGA+TGG | + | chr3.4:91306404-91306423 | None:intergenic | 30.0% | |
| ACTTGTGAACAAAAAAGCAA+AGG | - | chr3.4:91306575-91306594 | MS.gene37440:CDS | 30.0% | |
| AGCAAAGGGTAAAAAAATGT+AGG | - | chr3.4:91306590-91306609 | MS.gene37440:CDS | 30.0% | |
| ATATATTGAGGCAAATAGTG+GGG | - | chr3.4:91304632-91304651 | MS.gene37440:intron | 30.0% | |
| ATGAAACCTGATTCATAGTA+CGG | + | chr3.4:91304861-91304880 | None:intergenic | 30.0% | |
| CAAATCCCTATATGTAATAG+TGG | + | chr3.4:91305335-91305354 | None:intergenic | 30.0% | |
| CAAGAAAAAAGAGATTGTTC+AGG | - | chr3.4:91304746-91304765 | MS.gene37440:intron | 30.0% | |
| CACTATTACATATAGGGATT+TGG | - | chr3.4:91305333-91305352 | MS.gene37440:intron | 30.0% | |
| CATAGCAAGAAATAAGCAAA+AGG | + | chr3.4:91303659-91303678 | None:intergenic | 30.0% | |
| CATATAGATGATAACAACGT+AGG | - | chr3.4:91304948-91304967 | MS.gene37440:intron | 30.0% | |
| CTCATTTGGATCTATTGTTA+AGG | + | chr3.4:91303586-91303605 | None:intergenic | 30.0% | |
| CTTGTGAACAAAAAAGCAAA+GGG | - | chr3.4:91306576-91306595 | MS.gene37440:CDS | 30.0% | |
| GATGGAAAACTTTCTTACAA+TGG | + | chr3.4:91305179-91305198 | None:intergenic | 30.0% | |
| GATTAAGACCTCAAAAATGA+TGG | + | chr3.4:91307019-91307038 | None:intergenic | 30.0% | |
| GCTATACCACTATTACATAT+AGG | - | chr3.4:91305326-91305345 | MS.gene37440:intron | 30.0% | |
| GCTATTTGAAAGAAGGTTAA+GGG | + | chr3.4:91307363-91307382 | None:intergenic | 30.0% | |
| GGAGTGATATAAAAACAAGA+AGG | - | chr3.4:91306611-91306630 | MS.gene37440:CDS | 30.0% | |
| GTAGCAACTCAATTAGTTAA+AGG | + | chr3.4:91307733-91307752 | None:intergenic | 30.0% | |
| TCTTACAATGGTCAAATATC+AGG | + | chr3.4:91305167-91305186 | None:intergenic | 30.0% | |
| TCTTCAATCCAATTATCACA+TGG | + | chr3.4:91304345-91304364 | None:intergenic | 30.0% | |
| TGAACTGGAAACAATCAAAA+TGG | + | chr3.4:91305104-91305123 | None:intergenic | 30.0% | |
| TGTTATACTCTCAGTTTCTT+CGG | + | chr3.4:91304299-91304318 | None:intergenic | 30.0% | |
| TTGAAAGGCTATTTGAAAGA+AGG | + | chr3.4:91307370-91307389 | None:intergenic | 30.0% | |
| TTTACCTGAATTATTTCAGC+TGG | + | chr3.4:91307334-91307353 | None:intergenic | 30.0% | |
| TTTGTGGCAAAGATTACTAT+TGG | + | chr3.4:91306888-91306907 | None:intergenic | 30.0% | |
| ! | AAGTTCTAATGCTTCTTTAC+AGG | - | chr3.4:91306800-91306819 | MS.gene37440:intron | 30.0% |
| ! | ATTCTACAGCTTTGATACAT+GGG | - | chr3.4:91304570-91304589 | MS.gene37440:CDS | 30.0% |
| ! | GCAAGATATTTTGTCTCTTA+TGG | - | chr3.4:91306159-91306178 | MS.gene37440:intron | 30.0% |
| ! | TAGAGAATTTAAGCATTGCA+AGG | - | chr3.4:91305140-91305159 | MS.gene37440:CDS | 30.0% |
| ! | TATGCCAAACATGCTAATTT+TGG | - | chr3.4:91307390-91307409 | MS.gene37440:CDS | 30.0% |
| ! | TCTCTGTTTTCATGATTAGT+TGG | - | chr3.4:91307100-91307119 | MS.gene37440:intron | 30.0% |
| ! | TCTTATGGAAAATTTTCGAC+GGG | - | chr3.4:91304077-91304096 | MS.gene37440:intron | 30.0% |
| ! | TGATTTTGCAGTATCTCAAT+GGG | - | chr3.4:91307072-91307091 | MS.gene37440:intron | 30.0% |
| ! | TGTATTAAGTTTTGCTGAAG+TGG | - | chr3.4:91306949-91306968 | MS.gene37440:CDS | 30.0% |
| ! | TTTGAGGTCTTAATCTTCTT+CGG | - | chr3.4:91307024-91307043 | MS.gene37440:intron | 30.0% |
| !! | AACGTAGGATATAGTTTGTT+TGG | - | chr3.4:91304963-91304982 | MS.gene37440:intron | 30.0% |
| !! | ACGTAGGATATAGTTTGTTT+GGG | - | chr3.4:91304964-91304983 | MS.gene37440:intron | 30.0% |
| !! | CAAAGGCTCTGAATTAAAAT+TGG | - | chr3.4:91305267-91305286 | MS.gene37440:intron | 30.0% |
| !! | CTCTGTTTTCATGATTAGTT+GGG | - | chr3.4:91307101-91307120 | MS.gene37440:intron | 30.0% |
| !! | GAAAATATTTTTGCAGAGTC+TGG | + | chr3.4:91306031-91306050 | None:intergenic | 30.0% |
| !! | GTTTGGTTATTGTTTTGTTC+AGG | - | chr3.4:91303730-91303749 | MS.gene37440:intron | 30.0% |
| !! | TCTGTTTTCATGATTAGTTG+GGG | - | chr3.4:91307102-91307121 | MS.gene37440:intron | 30.0% |
| !!! | ACTGTTTTGAAATTTGTAGG+CGG | - | chr3.4:91307751-91307770 | MS.gene37440:intron | 30.0% |
| !!! | ATTTTAATTCAGAGCCTTTG+CGG | + | chr3.4:91305267-91305286 | None:intergenic | 30.0% |
| !!! | CAACTACTTGTTTTTTGGTT+TGG | - | chr3.4:91303713-91303732 | MS.gene37440:intron | 30.0% |
| !!! | GCTAACAACTACTTGTTTTT+TGG | - | chr3.4:91303708-91303727 | MS.gene37440:intron | 30.0% |
| !!! | GCTACTGTTTTGAAATTTGT+AGG | - | chr3.4:91307748-91307767 | MS.gene37440:intron | 30.0% |
| !!! | GGTAACATTTTGATTGTTTC+CGG | - | chr3.4:91305046-91305065 | MS.gene37440:CDS | 30.0% |
| !!! | TATTTTTTTCAGAGCTAAGG+AGG | + | chr3.4:91304998-91305017 | None:intergenic | 30.0% |
| !!! | TGATTTTTGGTACAAAACCT+TGG | + | chr3.4:91303939-91303958 | None:intergenic | 30.0% |
| AAAAGTCACCACTATTGCAA+TGG | + | chr3.4:91305401-91305420 | None:intergenic | 35.0% | |
| ACACAAAATCTGTGCTCATT+TGG | + | chr3.4:91303600-91303619 | None:intergenic | 35.0% | |
| AGAGTTGTTGTCATGTAATC+AGG | - | chr3.4:91306311-91306330 | MS.gene37440:intron | 35.0% | |
| AGCATGTTTGGCATATTGAA+AGG | + | chr3.4:91307385-91307404 | None:intergenic | 35.0% | |
| AGTATCAGCCATGTGATAAT+TGG | - | chr3.4:91304334-91304353 | MS.gene37440:intron | 35.0% | |
| AGTGCATATTCCTCTATTTG+TGG | + | chr3.4:91306904-91306923 | None:intergenic | 35.0% | |
| ATAAGTTCAAACACCTGGTA+AGG | - | chr3.4:91306336-91306355 | MS.gene37440:intron | 35.0% | |
| ATACTTCTGAACCAACCATT+GGG | + | chr3.4:91304029-91304048 | None:intergenic | 35.0% | |
| ATAGAGGAATATGCACTGTA+AGG | - | chr3.4:91306907-91306926 | MS.gene37440:CDS | 35.0% | |
| ATCATTCGAACACAAACCTA+CGG | - | chr3.4:91307307-91307326 | MS.gene37440:intron | 35.0% | |
| ATGAAGTGATGAGAGAAGAT+GGG | + | chr3.4:91305572-91305591 | None:intergenic | 35.0% | |
| ATTGGATTGAAGACAGTGAA+AGG | - | chr3.4:91304352-91304371 | MS.gene37440:CDS | 35.0% | |
| CAACACCTTCATCGATATAT+CGG | + | chr3.4:91306684-91306703 | None:intergenic | 35.0% | |
| CAACTCTGACTGATATGTAA+AGG | + | chr3.4:91306298-91306317 | None:intergenic | 35.0% | |
| CAATCCGCTATTTATAACAC+TGG | - | chr3.4:91305872-91305891 | MS.gene37440:intron | 35.0% | |
| CATTGAGATACTGCAAAATC+AGG | + | chr3.4:91307073-91307092 | None:intergenic | 35.0% | |
| CATTTACTTCAACCACTTTG+CGG | - | chr3.4:91305779-91305798 | MS.gene37440:intron | 35.0% | |
| CGGGGATGTTATATATATTG+AGG | - | chr3.4:91304620-91304639 | MS.gene37440:intron | 35.0% | |
| CTTGTTAAAACTGGGAATCT+GGG | - | chr3.4:91304166-91304185 | MS.gene37440:intron | 35.0% | |
| GATAAACCGTACTATGAATC+AGG | - | chr3.4:91304852-91304871 | MS.gene37440:intron | 35.0% | |
| GATATATGATGCCTTGATCA+AGG | - | chr3.4:91304402-91304421 | MS.gene37440:CDS | 35.0% | |
| GCATACACAAATAGTTGAAC+TGG | + | chr3.4:91305119-91305138 | None:intergenic | 35.0% | |
| GCATCCAAAATTAGCATGTT+TGG | + | chr3.4:91307397-91307416 | None:intergenic | 35.0% | |
| GGAGAAGATGAAAATTGAAG+AGG | - | chr3.4:91303422-91303441 | MS.gene37440:CDS | 35.0% | |
| GGCTATTTGAAAGAAGGTTA+AGG | + | chr3.4:91307364-91307383 | None:intergenic | 35.0% | |
| GTAATCTTTGCCACAAATAG+AGG | - | chr3.4:91306891-91306910 | MS.gene37440:CDS | 35.0% | |
| GTGATTCCCTTGTTAAAACT+GGG | - | chr3.4:91304158-91304177 | MS.gene37440:intron | 35.0% | |
| GTTATACTCTCAGTTTCTTC+GGG | + | chr3.4:91304298-91304317 | None:intergenic | 35.0% | |
| TATACTTCTGAACCAACCAT+TGG | + | chr3.4:91304030-91304049 | None:intergenic | 35.0% | |
| TATGAAGTGATGAGAGAAGA+TGG | + | chr3.4:91305573-91305592 | None:intergenic | 35.0% | |
| TGTGATTCCCTTGTTAAAAC+TGG | - | chr3.4:91304157-91304176 | MS.gene37440:intron | 35.0% | |
| ! | ACCGTACTTTTCTTCTAGTA+AGG | - | chr3.4:91305979-91305998 | MS.gene37440:intron | 35.0% |
| ! | ATCAAGGCATCATATATCGT+GGG | + | chr3.4:91304400-91304419 | None:intergenic | 35.0% |
| ! | CATTCTACAGCTTTGATACA+TGG | - | chr3.4:91304569-91304588 | MS.gene37440:CDS | 35.0% |
| ! | CTGATTTTGCAGTATCTCAA+TGG | - | chr3.4:91307071-91307090 | MS.gene37440:intron | 35.0% |
| ! | GAAGAAACTGAGAGTATAAC+AGG | - | chr3.4:91304298-91304317 | MS.gene37440:intron | 35.0% |
| ! | GATTTTGCAGTATCTCAATG+GGG | - | chr3.4:91307073-91307092 | MS.gene37440:intron | 35.0% |
| ! | TCTTTTCGTGAAAGATGATG+AGG | - | chr3.4:91305930-91305949 | MS.gene37440:intron | 35.0% |
| ! | TGGTTCAGAAGTATACTCAA+CGG | - | chr3.4:91304035-91304054 | MS.gene37440:intron | 35.0% |
| ! | TGTATTTTTCTTGCTGCTCT+TGG | + | chr3.4:91307832-91307851 | None:intergenic | 35.0% |
| !! | AAAATGCTTATGTTGGTGAC+AGG | - | chr3.4:91306651-91306670 | MS.gene37440:intron | 35.0% |
| !! | AGGAAAGTTTAGCTTTCCTT+GGG | - | chr3.4:91307488-91307507 | MS.gene37440:CDS | 35.0% |
| !! | CAGATTCCCAGTTTTAACAA+GGG | + | chr3.4:91304167-91304186 | None:intergenic | 35.0% |
| !! | CGTAGGATATAGTTTGTTTG+GGG | - | chr3.4:91304965-91304984 | MS.gene37440:intron | 35.0% |
| !! | CTCTAAAGCACGATTAAGAT+AGG | + | chr3.4:91306853-91306872 | None:intergenic | 35.0% |
| !! | GTGTTATAAATAGCGGATTG+CGG | + | chr3.4:91305872-91305891 | None:intergenic | 35.0% |
| !! | TATTGTTTTGTTCAGGTCAG+TGG | - | chr3.4:91303737-91303756 | MS.gene37440:intron | 35.0% |
| !! | TCTAGACACTTGCTATATAC+TGG | - | chr3.4:91306049-91306068 | MS.gene37440:intron | 35.0% |
| AAAGAAGACCGAGGTTCTTA+TGG | - | chr3.4:91304062-91304081 | MS.gene37440:intron | 40.0% | |
| AAGTGCTAATGCAGTCTTTC+CGG | + | chr3.4:91303894-91303913 | None:intergenic | 40.0% | |
| AATCGATCCAATAGGTCAAC+AGG | + | chr3.4:91307283-91307302 | None:intergenic | 40.0% | |
| AATTATTTCAGCTGGACCGT+AGG | + | chr3.4:91307326-91307345 | None:intergenic | 40.0% | |
| ACAGGTGCATATGCTAGATA+TGG | - | chr3.4:91306818-91306837 | MS.gene37440:intron | 40.0% | |
| ACATAAAGTCTGCCCATTGT+GGG | + | chr3.4:91306376-91306395 | None:intergenic | 40.0% | |
| ACTGCAAAATCAGGTCTTCT+AGG | + | chr3.4:91307064-91307083 | None:intergenic | 40.0% | |
| AGCAGACAAAGTGGTAACAA+GGG | + | chr3.4:91304209-91304228 | None:intergenic | 40.0% | |
| AGCGTTGTTGCCAAGATAAA+TGG | - | chr3.4:91307640-91307659 | MS.gene37440:intron | 40.0% | |
| AGGAACCAAGCAACTAAAGT+TGG | - | chr3.4:91304372-91304391 | MS.gene37440:CDS | 40.0% | |
| AGGTCATAAGTTCAAACACC+TGG | - | chr3.4:91306331-91306350 | MS.gene37440:intron | 40.0% | |
| ATTAGCACTTGGGATATGTC+AGG | - | chr3.4:91303904-91303923 | MS.gene37440:intron | 40.0% | |
| CCTTGTTAAAACTGGGAATC+TGG | - | chr3.4:91304165-91304184 | MS.gene37440:intron | 40.0% | |
| CTTTGCGGAGTAACATCTTA+GGG | + | chr3.4:91305252-91305271 | None:intergenic | 40.0% | |
| GAAAGACTGCATTAGCACTT+GGG | - | chr3.4:91303894-91303913 | MS.gene37440:intron | 40.0% | |
| GATGATGAAACCTAGGAAGA+CGG | - | chr3.4:91306186-91306205 | MS.gene37440:intron | 40.0% | |
| GCTACTCACACTCACATTAA+AGG | - | chr3.4:91303474-91303493 | MS.gene37440:CDS | 40.0% | |
| GGATGTAACCCTACATGATT+TGG | - | chr3.4:91306108-91306127 | MS.gene37440:intron | 40.0% | |
| GTCAACCGATATATCGATGA+AGG | - | chr3.4:91306676-91306695 | MS.gene37440:intron | 40.0% | |
| TAGCAGACAAAGTGGTAACA+AGG | + | chr3.4:91304210-91304229 | None:intergenic | 40.0% | |
| TCTTCCTAGGTTTCATCATC+TGG | + | chr3.4:91306186-91306205 | None:intergenic | 40.0% | |
| TGAAGTGATGAGAGAAGATG+GGG | + | chr3.4:91305571-91305590 | None:intergenic | 40.0% | |
| TGATCACCAATCGATCCAAT+AGG | + | chr3.4:91307291-91307310 | None:intergenic | 40.0% | |
| TGATGCCTTGATCAAGGAAA+AGG | - | chr3.4:91304408-91304427 | MS.gene37440:CDS | 40.0% | |
| TGTTGACCTATTGGATCGAT+TGG | - | chr3.4:91307282-91307301 | MS.gene37440:intron | 40.0% | |
| TTCTGCTACCATTGCAATAG+TGG | - | chr3.4:91305390-91305409 | MS.gene37440:intron | 40.0% | |
| ! | AAAGCAGTTCCTTTTGCTTC+TGG | - | chr3.4:91303761-91303780 | MS.gene37440:CDS | 40.0% |
| ! | AAATAGTGGGGCTGTGAAAA+GGG | - | chr3.4:91304644-91304663 | MS.gene37440:intron | 40.0% |
| ! | AAGCAGTTCCTTTTGCTTCT+GGG | - | chr3.4:91303762-91303781 | MS.gene37440:CDS | 40.0% |
| ! | GAAACTGAGAGTATAACAGG+AGG | - | chr3.4:91304301-91304320 | MS.gene37440:intron | 40.0% |
| ! | GAGAGTATAACAGGAGGTTA+TGG | - | chr3.4:91304307-91304326 | MS.gene37440:intron | 40.0% |
| ! | GATCAAGGCATCATATATCG+TGG | + | chr3.4:91304401-91304420 | None:intergenic | 40.0% |
| ! | GTTGTCTCTGCCATTTATCT+TGG | + | chr3.4:91307653-91307672 | None:intergenic | 40.0% |
| ! | TAAGGAAGTATATGAAGGCG+AGG | - | chr3.4:91304125-91304144 | MS.gene37440:intron | 40.0% |
| ! | TCAAGGCATCATATATCGTG+GGG | + | chr3.4:91304399-91304418 | None:intergenic | 40.0% |
| ! | TTACACATGCCTGTTTGTTG+CGG | - | chr3.4:91303621-91303640 | MS.gene37440:CDS | 40.0% |
| !! | AAACTGGGAATCTGGGATTT+TGG | - | chr3.4:91304173-91304192 | MS.gene37440:intron | 40.0% |
| !! | ACTTTTATTTGGGTGGGAAC+TGG | - | chr3.4:91304503-91304522 | MS.gene37440:intron | 40.0% |
| !! | ATTCTAAAGCAGACCCACAA+TGG | - | chr3.4:91306360-91306379 | MS.gene37440:intron | 40.0% |
| !! | CAGTAGCAAAAGCATCACTT+CGG | + | chr3.4:91304674-91304693 | None:intergenic | 40.0% |
| !! | CCAGATTCCCAGTTTTAACA+AGG | + | chr3.4:91304168-91304187 | None:intergenic | 40.0% |
| !! | CTAGTAGCCCATCATTTTTG+AGG | - | chr3.4:91307008-91307027 | MS.gene37440:intron | 40.0% |
| !! | CTGTCCGCTATTTCTCATAT+CGG | - | chr3.4:91305824-91305843 | MS.gene37440:intron | 40.0% |
| !! | CTTTTATTTGGGTGGGAACT+GGG | - | chr3.4:91304504-91304523 | MS.gene37440:intron | 40.0% |
| !! | GAGGAAAGTTTAGCTTTCCT+TGG | - | chr3.4:91307487-91307506 | MS.gene37440:CDS | 40.0% |
| !! | GGAAAGTTTAGCTTTCCTTG+GGG | - | chr3.4:91307489-91307508 | MS.gene37440:CDS | 40.0% |
| !! | TAGCGGATTGCGGAAAATAA+CGG | + | chr3.4:91305862-91305881 | None:intergenic | 40.0% |
| !! | TTCTAAAGCAGACCCACAAT+GGG | - | chr3.4:91306361-91306380 | MS.gene37440:intron | 40.0% |
| !!! | GAAAATTTTCGACGGGCTAT+CGG | - | chr3.4:91304084-91304103 | MS.gene37440:intron | 40.0% |
| AAAATATCTTGCCCCCCTTG+AGG | + | chr3.4:91306151-91306170 | None:intergenic | 45.0% | |
| AACGGAAGTAAAGAAGACCG+AGG | - | chr3.4:91304053-91304072 | MS.gene37440:intron | 45.0% | |
| ACAGCATAGCGCGATATTAG+CGG | + | chr3.4:91305808-91305827 | None:intergenic | 45.0% | |
| ACTGATATGACCAGTCCTCA+TGG | - | chr3.4:91307253-91307272 | MS.gene37440:intron | 45.0% | |
| AGTGGTAACAAGGGAATCAC+AGG | + | chr3.4:91304200-91304219 | None:intergenic | 45.0% | |
| ATGAGAGGTTACCTAGGTAG+TGG | + | chr3.4:91305529-91305548 | None:intergenic | 45.0% | |
| CACAATGGGCAGACTTTATG+TGG | - | chr3.4:91306375-91306394 | MS.gene37440:intron | 45.0% | |
| CACACTCACATTAAAGGCCT+AGG | - | chr3.4:91303480-91303499 | MS.gene37440:CDS | 45.0% | |
| CACATAAAGTCTGCCCATTG+TGG | + | chr3.4:91306377-91306396 | None:intergenic | 45.0% | |
| CATAGTACGGTTTATCGCCA+AGG | + | chr3.4:91304848-91304867 | None:intergenic | 45.0% | |
| CATGATACGCCAGAAGAAGA+TGG | - | chr3.4:91303832-91303851 | MS.gene37440:intron | 45.0% | |
| CATTAAAGGCCTAGGTCTTG+AGG | - | chr3.4:91303488-91303507 | MS.gene37440:CDS | 45.0% | |
| CCTAAGATGTTACTCCGCAA+AGG | - | chr3.4:91305250-91305269 | MS.gene37440:intron | 45.0% | |
| CCTTGATCAAGGAAAAGGTG+CGG | - | chr3.4:91304413-91304432 | MS.gene37440:CDS | 45.0% | |
| CCTTTGCGGAGTAACATCTT+AGG | + | chr3.4:91305253-91305272 | None:intergenic | 45.0% | |
| CGGTCCAGCTGAAATAATTC+AGG | - | chr3.4:91307327-91307346 | MS.gene37440:intron | 45.0% | |
| CGTCAATAAACAGAACCCCA+GGG | + | chr3.4:91306717-91306736 | None:intergenic | 45.0% | |
| GAACATACTCCTCAGCTTCA+AGG | + | chr3.4:91304704-91304723 | None:intergenic | 45.0% | |
| GAGAACAAACCTCAAGACCT+AGG | + | chr3.4:91303500-91303519 | None:intergenic | 45.0% | |
| GAGTATGTTCCACTTCCCAA+GGG | - | chr3.4:91304714-91304733 | MS.gene37440:intron | 45.0% | |
| GCAGAATCGCAATAGCGTAT+CGG | + | chr3.4:91305376-91305395 | None:intergenic | 45.0% | |
| GCAGAATGGAACCTACAAAG+CGG | + | chr3.4:91304007-91304026 | None:intergenic | 45.0% | |
| GGAAAGACTGCATTAGCACT+TGG | - | chr3.4:91303893-91303912 | MS.gene37440:intron | 45.0% | |
| GGCAGCATCCAAATCATGTA+GGG | + | chr3.4:91306119-91306138 | None:intergenic | 45.0% | |
| GGCTATCGGTCTACGTATTA+AGG | - | chr3.4:91304098-91304117 | MS.gene37440:intron | 45.0% | |
| GTCTAGCAGAGGAACTAGTT+TGG | - | chr3.4:91305208-91305227 | MS.gene37440:intron | 45.0% | |
| TCAGTGATGAGAGGTTACCT+AGG | + | chr3.4:91305535-91305554 | None:intergenic | 45.0% | |
| TCAGTGATTTCCGTCTTCCT+AGG | + | chr3.4:91306199-91306218 | None:intergenic | 45.0% | |
| TCGTCAATAAACAGAACCCC+AGG | + | chr3.4:91306718-91306737 | None:intergenic | 45.0% | |
| TGAGAGGTTACCTAGGTAGT+GGG | + | chr3.4:91305528-91305547 | None:intergenic | 45.0% | |
| TGAGTTTGACCTTGAAGCTG+AGG | - | chr3.4:91304692-91304711 | MS.gene37440:intron | 45.0% | |
| TGGCAGCATCCAAATCATGT+AGG | + | chr3.4:91306120-91306139 | None:intergenic | 45.0% | |
| TGGCATACCTGTTGACCTAT+TGG | - | chr3.4:91307273-91307292 | MS.gene37440:intron | 45.0% | |
| TGGGGTTCTGTTTATTGACG+AGG | - | chr3.4:91306717-91306736 | MS.gene37440:intron | 45.0% | |
| TTCTTGTGAACCTCTCCCTT+GGG | + | chr3.4:91304732-91304751 | None:intergenic | 45.0% | |
| TTGGACAACGGACATCTCTA+AGG | - | chr3.4:91307515-91307534 | MS.gene37440:intron | 45.0% | |
| TTGGGATATGTCAGGAGCTT+GGG | - | chr3.4:91303912-91303931 | MS.gene37440:intron | 45.0% | |
| TTTCTTGTGAACCTCTCCCT+TGG | + | chr3.4:91304733-91304752 | None:intergenic | 45.0% | |
| ! | CAAATAGTGGGGCTGTGAAA+AGG | - | chr3.4:91304643-91304662 | MS.gene37440:intron | 45.0% |
| ! | CCTTTTGCTTCTGGGTTTGT+GGG | - | chr3.4:91303770-91303789 | MS.gene37440:CDS | 45.0% |
| ! | TACACATGCCTGTTTGTTGC+GGG | - | chr3.4:91303622-91303641 | MS.gene37440:CDS | 45.0% |
| ! | TAGCAGAGGAACTAGTTTGG+TGG | - | chr3.4:91305211-91305230 | MS.gene37440:intron | 45.0% |
| ! | TCCTTTTGCTTCTGGGTTTG+TGG | - | chr3.4:91303769-91303788 | MS.gene37440:CDS | 45.0% |
| ! | TTAGCTTTCCTTGGGGAGAT+TGG | - | chr3.4:91307496-91307515 | MS.gene37440:CDS | 45.0% |
| !! | CTGCTTTAGAATGCCTTACC+AGG | + | chr3.4:91306352-91306371 | None:intergenic | 45.0% |
| !! | TACCTAGGTAGTGGGGTTTA+GGG | + | chr3.4:91305520-91305539 | None:intergenic | 45.0% |
| !! | TGTGATTTTGGTCCTGTGCA+AGG | - | chr3.4:91304258-91304277 | MS.gene37440:intron | 45.0% |
| !! | TTACCTAGGTAGTGGGGTTT+AGG | + | chr3.4:91305521-91305540 | None:intergenic | 45.0% |
| !! | ATGATAAAAATAATTAAAAT+GGG | + | chr3.4:91307190-91307209 | None:intergenic | 5.0% |
| AACAGGTATGCCATGAGGAC+TGG | + | chr3.4:91307266-91307285 | None:intergenic | 50.0% | |
| AATGCAGTCTTTCCGGTTCC+AGG | + | chr3.4:91303887-91303906 | None:intergenic | 50.0% | |
| AGAGGAGGTTCAGTGATGAG+AGG | + | chr3.4:91305544-91305563 | None:intergenic | 50.0% | |
| AGGTCAACAGGTATGCCATG+AGG | + | chr3.4:91307271-91307290 | None:intergenic | 50.0% | |
| AGTGATGAGAGAAGATGGGG+AGG | + | chr3.4:91305568-91305587 | None:intergenic | 50.0% | |
| AGTTTCTTCGGGAGAGAGCT+CGG | + | chr3.4:91304287-91304306 | None:intergenic | 50.0% | |
| ATACGCCAGAAGAAGATGGC+TGG | - | chr3.4:91303836-91303855 | MS.gene37440:intron | 50.0% | |
| ATGCAGTCTTTCCGGTTCCA+GGG | + | chr3.4:91303886-91303905 | None:intergenic | 50.0% | |
| CAAGTTCCTCCACTTGAGCT+CGG | + | chr3.4:91307459-91307478 | None:intergenic | 50.0% | |
| CCCACAAACCCAGAAGCAAA+AGG | + | chr3.4:91303773-91303792 | None:intergenic | 50.0% | |
| CTGCTAGACTGCTATGCAGA+TGG | + | chr3.4:91305197-91305216 | None:intergenic | 50.0% | |
| CTTGGGATATGTCAGGAGCT+TGG | - | chr3.4:91303911-91303930 | MS.gene37440:intron | 50.0% | |
| GAACCAACCATTGGGCAGAA+TGG | + | chr3.4:91304021-91304040 | None:intergenic | 50.0% | |
| GAGAGGTTACCTAGGTAGTG+GGG | + | chr3.4:91305527-91305546 | None:intergenic | 50.0% | |
| GGAGTATGTTCCACTTCCCA+AGG | - | chr3.4:91304713-91304732 | MS.gene37440:intron | 50.0% | |
| GGGATTTATGCACACTGTGC+AGG | - | chr3.4:91304590-91304609 | MS.gene37440:intron | 50.0% | |
| GGGGTCCAACTTTAGTTGCT+TGG | + | chr3.4:91304380-91304399 | None:intergenic | 50.0% | |
| GTAGGTTCCATTCTGCCCAA+TGG | - | chr3.4:91304011-91304030 | MS.gene37440:CDS | 50.0% | |
| GTGTTGCAGAACTTGTCCCT+GGG | - | chr3.4:91306698-91306717 | MS.gene37440:intron | 50.0% | |
| GTTCCATTCTGCCCAATGGT+TGG | - | chr3.4:91304015-91304034 | MS.gene37440:intron | 50.0% | |
| TATTAGCGGAAGCCGCAAAG+TGG | + | chr3.4:91305794-91305813 | None:intergenic | 50.0% | |
| TCCTTGGGGAGATTGGACAA+CGG | - | chr3.4:91307503-91307522 | MS.gene37440:CDS | 50.0% | |
| TCTAGCTATCCGAGCTCAAG+TGG | - | chr3.4:91307447-91307466 | MS.gene37440:CDS | 50.0% | |
| TCTGCATAGCAGTCTAGCAG+AGG | - | chr3.4:91305197-91305216 | MS.gene37440:intron | 50.0% | |
| TGGCAGAGACAACATCTGCA+AGG | - | chr3.4:91307660-91307679 | MS.gene37440:intron | 50.0% | |
| TGGGCCAGATGATGAAACCT+AGG | - | chr3.4:91306179-91306198 | MS.gene37440:intron | 50.0% | |
| TGGTTTCACCCGCAACAAAC+AGG | + | chr3.4:91303633-91303652 | None:intergenic | 50.0% | |
| TGTTGCAGAACTTGTCCCTG+GGG | - | chr3.4:91306699-91306718 | MS.gene37440:intron | 50.0% | |
| TTGCTGCTCTTGGAGAAGCT+TGG | + | chr3.4:91307822-91307841 | None:intergenic | 50.0% | |
| ! | CCGCACCTTTTCCTTGATCA+AGG | + | chr3.4:91304416-91304435 | None:intergenic | 50.0% |
| !! | ACCTAGGTAGTGGGGTTTAG+GGG | + | chr3.4:91305519-91305538 | None:intergenic | 50.0% |
| !! | GCTGAGTTGGTGATGAGATG+AGG | - | chr3.4:91305483-91305502 | MS.gene37440:intron | 50.0% |
| !! | TCAAGTGGAGGAACTTGCTG+TGG | - | chr3.4:91307462-91307481 | MS.gene37440:CDS | 50.0% |
| ACACTGTGCAGGTAGCTGTC+GGG | - | chr3.4:91304601-91304620 | MS.gene37440:intron | 55.0% | |
| ACCCCTAAACCCCACTACCT+AGG | - | chr3.4:91305515-91305534 | MS.gene37440:intron | 55.0% | |
| AGCTATCCGAGCTCAAGTGG+AGG | - | chr3.4:91307450-91307469 | MS.gene37440:CDS | 55.0% | |
| AGTGGGGCTGTGAAAAGGGT+TGG | - | chr3.4:91304648-91304667 | MS.gene37440:intron | 55.0% | |
| ATCTTGGCAACAACGCTCGC+AGG | + | chr3.4:91307637-91307656 | None:intergenic | 55.0% | |
| ATGTCAGGAGCTTGGGACCA+AGG | - | chr3.4:91303919-91303938 | MS.gene37440:intron | 55.0% | |
| CACACTGTGCAGGTAGCTGT+CGG | - | chr3.4:91304600-91304619 | MS.gene37440:intron | 55.0% | |
| CCAGAAGAAGATGGCTGGCA+AGG | - | chr3.4:91303841-91303860 | MS.gene37440:intron | 55.0% | |
| CCTTGCCAGCCATCTTCTTC+TGG | + | chr3.4:91303844-91303863 | None:intergenic | 55.0% | |
| GGCGTATCATGTCGACCACA+AGG | + | chr3.4:91303823-91303842 | None:intergenic | 55.0% | |
| TCCGTTGTCCAATCTCCCCA+AGG | + | chr3.4:91307507-91307526 | None:intergenic | 55.0% | |
| TGAACCTCTCCCTTGGGAAG+TGG | + | chr3.4:91304726-91304745 | None:intergenic | 55.0% | |
| TGCAGTCTTTCCGGTTCCAG+GGG | + | chr3.4:91303885-91303904 | None:intergenic | 55.0% | |
| TGGGTTTGTGGGACAAGCTG+AGG | - | chr3.4:91303781-91303800 | MS.gene37440:CDS | 55.0% | |
| TGTTCCACTTCCCAAGGGAG+AGG | - | chr3.4:91304719-91304738 | MS.gene37440:intron | 55.0% | |
| ! | AAGAGAAGCGTGTGGCCTTG+TGG | - | chr3.4:91303805-91303824 | MS.gene37440:CDS | 55.0% |
| ! | GGTGTTGCAGAACTTGTCCC+TGG | - | chr3.4:91306697-91306716 | MS.gene37440:intron | 55.0% |
| !! | GGAGGAACTTGCTGTGGATG+AGG | - | chr3.4:91307468-91307487 | MS.gene37440:CDS | 55.0% |
| AGAAGATGGGGAGGCAGAGG+AGG | + | chr3.4:91305559-91305578 | None:intergenic | 60.0% | |
| AGAGCTCGGTCACCTTGCAC+AGG | + | chr3.4:91304273-91304292 | None:intergenic | 60.0% | |
| CACTGTGCAGGTAGCTGTCG+GGG | - | chr3.4:91304602-91304621 | MS.gene37440:intron | 60.0% | |
| GAGAGAAGATGGGGAGGCAG+AGG | + | chr3.4:91305562-91305581 | None:intergenic | 60.0% | |
| GCAGTCTTTCCGGTTCCAGG+GGG | + | chr3.4:91303884-91303903 | None:intergenic | 60.0% | |
| ! | GCTGAGGCAAGAGAAGCGTG+TGG | - | chr3.4:91303797-91303816 | MS.gene37440:CDS | 60.0% |
| CTGCCAACGCGCGACCTCAA+GGG | - | chr3.4:91306134-91306153 | MS.gene37440:intron | 65.0% | |
| TGCCAACGCGCGACCTCAAG+GGG | - | chr3.4:91306135-91306154 | MS.gene37440:intron | 65.0% | |
| ! | GCAAGGCACTCCTTCTCGCC+GGG | - | chr3.4:91303858-91303877 | MS.gene37440:intron | 65.0% |
| ! | GGCAAGGCACTCCTTCTCGC+CGG | - | chr3.4:91303857-91303876 | MS.gene37440:intron | 65.0% |
| CCAACGCGCGACCTCAAGGG+GGG | - | chr3.4:91306137-91306156 | MS.gene37440:intron | 70.0% | |
| CTTTCCGGTTCCAGGGGGCC+CGG | + | chr3.4:91303879-91303898 | None:intergenic | 70.0% | |
| GCCAACGCGCGACCTCAAGG+GGG | - | chr3.4:91306136-91306155 | MS.gene37440:intron | 70.0% | |
| GCTGCCAACGCGCGACCTCA+AGG | - | chr3.4:91306133-91306152 | MS.gene37440:intron | 70.0% | |
| CCCCCCTTGAGGTCGCGCGT+TGG | + | chr3.4:91306140-91306159 | None:intergenic | 75.0% | |
| TTCCAGGGGGCCCGGCGAGA+AGG | + | chr3.4:91303871-91303890 | None:intergenic | 75.0% | |
| ! | CTCCTTCTCGCCGGGCCCCC+TGG | - | chr3.4:91303866-91303885 | MS.gene37440:intron | 80.0% |
| ! | CTCGCCGGGCCCCCTGGAAC+CGG | - | chr3.4:91303872-91303891 | MS.gene37440:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 91303420 | 91307859 | 91303420 | ID=MS.gene37440 |
| chr3.4 | mRNA | 91303420 | 91307859 | 91303420 | ID=MS.gene37440.t1;Parent=MS.gene37440 |
| chr3.4 | exon | 91307770 | 91307859 | 91307770 | ID=MS.gene37440.t1.exon1;Parent=MS.gene37440.t1 |
| chr3.4 | CDS | 91307770 | 91307859 | 91307770 | ID=cds.MS.gene37440.t1;Parent=MS.gene37440.t1 |
| chr3.4 | exon | 91307339 | 91307527 | 91307339 | ID=MS.gene37440.t1.exon2;Parent=MS.gene37440.t1 |
| chr3.4 | CDS | 91307339 | 91307527 | 91307339 | ID=cds.MS.gene37440.t1;Parent=MS.gene37440.t1 |
| chr3.4 | exon | 91307133 | 91307264 | 91307133 | ID=MS.gene37440.t1.exon3;Parent=MS.gene37440.t1 |
| chr3.4 | CDS | 91307133 | 91307264 | 91307133 | ID=cds.MS.gene37440.t1;Parent=MS.gene37440.t1 |
| chr3.4 | exon | 91306850 | 91306999 | 91306850 | ID=MS.gene37440.t1.exon4;Parent=MS.gene37440.t1 |
| chr3.4 | CDS | 91306850 | 91306999 | 91306850 | ID=cds.MS.gene37440.t1;Parent=MS.gene37440.t1 |
| chr3.4 | exon | 91306512 | 91306667 | 91306512 | ID=MS.gene37440.t1.exon5;Parent=MS.gene37440.t1 |
| chr3.4 | CDS | 91306512 | 91306667 | 91306512 | ID=cds.MS.gene37440.t1;Parent=MS.gene37440.t1 |
| chr3.4 | exon | 91305036 | 91305170 | 91305036 | ID=MS.gene37440.t1.exon6;Parent=MS.gene37440.t1 |
| chr3.4 | CDS | 91305036 | 91305170 | 91305036 | ID=cds.MS.gene37440.t1;Parent=MS.gene37440.t1 |
| chr3.4 | exon | 91304541 | 91304606 | 91304541 | ID=MS.gene37440.t1.exon7;Parent=MS.gene37440.t1 |
| chr3.4 | CDS | 91304541 | 91304606 | 91304541 | ID=cds.MS.gene37440.t1;Parent=MS.gene37440.t1 |
| chr3.4 | exon | 91304351 | 91304457 | 91304351 | ID=MS.gene37440.t1.exon8;Parent=MS.gene37440.t1 |
| chr3.4 | CDS | 91304351 | 91304457 | 91304351 | ID=cds.MS.gene37440.t1;Parent=MS.gene37440.t1 |
| chr3.4 | exon | 91303931 | 91304030 | 91303931 | ID=MS.gene37440.t1.exon9;Parent=MS.gene37440.t1 |
| chr3.4 | CDS | 91303931 | 91304030 | 91303931 | ID=cds.MS.gene37440.t1;Parent=MS.gene37440.t1 |
| chr3.4 | exon | 91303743 | 91303834 | 91303743 | ID=MS.gene37440.t1.exon10;Parent=MS.gene37440.t1 |
| chr3.4 | CDS | 91303743 | 91303834 | 91303743 | ID=cds.MS.gene37440.t1;Parent=MS.gene37440.t1 |
| chr3.4 | exon | 91303598 | 91303667 | 91303598 | ID=MS.gene37440.t1.exon11;Parent=MS.gene37440.t1 |
| chr3.4 | CDS | 91303598 | 91303667 | 91303598 | ID=cds.MS.gene37440.t1;Parent=MS.gene37440.t1 |
| chr3.4 | exon | 91303420 | 91303509 | 91303420 | ID=MS.gene37440.t1.exon12;Parent=MS.gene37440.t1 |
| chr3.4 | CDS | 91303420 | 91303509 | 91303420 | ID=cds.MS.gene37440.t1;Parent=MS.gene37440.t1 |
| Gene Sequence |
| Protein sequence |
