Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32832.t1 | XP_003603117.1 | 99.8 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 7.20E-252 | 879.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32832.t1 | Q9FMR9 | 90.2 | 458 | 45 | 0 | 1 | 458 | 1 | 458 | 4.2e-232 | 805.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32832.t1 | G7J7J7 | 99.8 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 5.2e-252 | 879.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32832 | MS.gene60517 | PPI |
| MS.gene32832 | MS.gene90906 | PPI |
| MS.gene04094 | MS.gene32832 | PPI |
| MS.gene32832 | MS.gene09988 | PPI |
| MS.gene32832 | MS.gene022650 | PPI |
| MS.gene32832 | MS.gene046177 | PPI |
| MS.gene005792 | MS.gene32832 | PPI |
| MS.gene32832 | MS.gene04400 | PPI |
| MS.gene32832 | MS.gene037838 | PPI |
| MS.gene32832 | MS.gene08084 | PPI |
| MS.gene32832 | MS.gene68085 | PPI |
| MS.gene055437 | MS.gene32832 | PPI |
| MS.gene32832 | MS.gene84545 | PPI |
| MS.gene32832 | MS.gene74260 | PPI |
| MS.gene90097 | MS.gene32832 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32832.t1 | MTR_3g104080 | 99.782 | 458 | 1 | 0 | 1 | 458 | 1 | 458 | 0.0 | 929 |
| MS.gene32832.t1 | MTR_6g023370 | 91.648 | 455 | 16 | 2 | 4 | 458 | 1 | 433 | 0.0 | 827 |
| MS.gene32832.t1 | MTR_3g104080 | 100.000 | 360 | 0 | 0 | 99 | 458 | 1 | 360 | 0.0 | 731 |
| MS.gene32832.t1 | MTR_3g061640 | 44.421 | 466 | 232 | 7 | 1 | 457 | 1 | 448 | 1.64e-120 | 360 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32832.t1 | AT5G22330 | 90.175 | 458 | 45 | 0 | 1 | 458 | 1 | 458 | 0.0 | 850 |
| MS.gene32832.t1 | AT3G49830 | 42.048 | 459 | 254 | 5 | 1 | 457 | 1 | 449 | 3.51e-120 | 359 |
| MS.gene32832.t1 | AT5G67630 | 43.777 | 466 | 235 | 7 | 1 | 457 | 1 | 448 | 1.49e-119 | 358 |
Find 131 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAATTTGTTCACTTTATT+TGG | 0.114144 | 3.1:-82185715 | MS.gene32832:CDS |
| CCTTGCCAGCCATCTTCTTC+TGG | 0.261287 | 3.1:+82189680 | None:intergenic |
| GGCTATCGGTCTACGTATTA+AGG | 0.266184 | 3.1:-82189423 | MS.gene32832:CDS |
| GCTACTCACACTCACATTAA+AGG | 0.267682 | 3.1:-82190046 | MS.gene32832:CDS |
| AGTATCAGCCATGTGATAAT+TGG | 0.271135 | 3.1:-82189186 | MS.gene32832:CDS |
| AATGCAGTCTTTCCGGTTCC+AGG | 0.283045 | 3.1:+82189637 | None:intergenic |
| TGGGATACCTGTTGACCTAT+TGG | 0.319335 | 3.1:-82186223 | MS.gene32832:CDS |
| TGTTATACTCTCAGTTTCTT+CGG | 0.319337 | 3.1:+82189224 | None:intergenic |
| AAGTGCTAATGCAGTCTTTC+CGG | 0.320842 | 3.1:+82189630 | None:intergenic |
| AAAGAAGACTGAGGTTCTTA+TGG | 0.327190 | 3.1:-82189459 | MS.gene32832:CDS |
| TCTACGTATTAAGGAAAATA+AGG | 0.329275 | 3.1:-82189414 | MS.gene32832:CDS |
| GGATGTAACCCTACATGATT+TGG | 0.331586 | 3.1:-82187390 | MS.gene32832:CDS |
| TTTGTGGCAAAGATTACTAT+TGG | 0.345084 | 3.1:+82186613 | None:intergenic |
| GTTATACTCTCAGTTTCTTC+GGG | 0.346912 | 3.1:+82189225 | None:intergenic |
| CGGTCCAGCTGAAATAATTC+AGG | 0.353377 | 3.1:-82186169 | MS.gene32832:intron |
| TCTTCCTAGGTTTCATCATC+TGG | 0.372923 | 3.1:+82187315 | None:intergenic |
| GTTGTCTCTGCCATTTATCT+TGG | 0.373972 | 3.1:+82185846 | None:intergenic |
| TTAGCTTTCCTTGGGGAGAT+TGG | 0.379741 | 3.1:-82186000 | MS.gene32832:CDS |
| GTTGAGACAAGAAATTAATA+AGG | 0.382068 | 3.1:-82187276 | MS.gene32832:intron |
| GGGGTCCAACTTTAGTTGCT+TGG | 0.386390 | 3.1:+82189143 | None:intergenic |
| GAGGAAAGCTTAGCTTTCCT+TGG | 0.386657 | 3.1:-82186009 | MS.gene32832:CDS |
| AGCGTTGTTGCCAAGATAAA+TGG | 0.390480 | 3.1:-82185856 | MS.gene32832:CDS |
| TTTCTTGTGAACCTCTCCCT+TGG | 0.403331 | 3.1:+82188790 | None:intergenic |
| AGGAAAGCTTAGCTTTCCTT+GGG | 0.411515 | 3.1:-82186008 | MS.gene32832:CDS |
| TTGGGATATGTCAGGAGCTT+GGG | 0.414954 | 3.1:-82189609 | MS.gene32832:CDS |
| AGTGCATATTCCTCTATTTG+TGG | 0.417327 | 3.1:+82186597 | None:intergenic |
| GGCAAGGCACTCCTTCTCGC+CGG | 0.423804 | 3.1:-82189664 | MS.gene32832:CDS |
| GCAAGGCACTCCTTCTCGCC+GGG | 0.424279 | 3.1:-82189663 | MS.gene32832:CDS |
| TTCTTGTGAACCTCTCCCTT+GGG | 0.424676 | 3.1:+82188791 | None:intergenic |
| GAAGAAACTGAGAGTATAAC+AGG | 0.425557 | 3.1:-82189222 | MS.gene32832:CDS |
| TTTACCTGAATTATTTCAGC+TGG | 0.429224 | 3.1:+82186165 | None:intergenic |
| CAAATAGTGGGGCTGTGAAA+AGG | 0.431610 | 3.1:-82188877 | MS.gene32832:CDS |
| ACAGGTGCATATGCTAGATA+TGG | 0.434605 | 3.1:-82186680 | MS.gene32832:intron |
| CAACACCTTCATCGATATAT+CGG | 0.435831 | 3.1:+82186818 | None:intergenic |
| GGTGTTGCAGAACTTGTCCC+TGG | 0.444117 | 3.1:-82186802 | MS.gene32832:CDS |
| AATCGATCCAATAGGTCAAC+AGG | 0.450490 | 3.1:+82186216 | None:intergenic |
| TCAGTGATTTCCGTCTTCCT+AGG | 0.453246 | 3.1:+82187302 | None:intergenic |
| GAGAGTATAACAGGAGGTTA+TGG | 0.453991 | 3.1:-82189213 | MS.gene32832:CDS |
| CTCTAAAGCACGATTAAGAT+AGG | 0.457106 | 3.1:+82186648 | None:intergenic |
| GTAATCTTTGCCACAAATAG+AGG | 0.461084 | 3.1:-82186607 | MS.gene32832:CDS |
| ACACTGTGCAGGTAGCTGTC+GGG | 0.466455 | 3.1:-82188919 | MS.gene32832:intron |
| TTGCTGCTCTTGGAGAAGCT+TGG | 0.474441 | 3.1:+82185677 | None:intergenic |
| GCTGCCAACGCGCGACCTCA+AGG | 0.479841 | 3.1:-82187365 | MS.gene32832:CDS |
| GAACATACTCCTCAGCTTCA+AGG | 0.485334 | 3.1:+82188819 | None:intergenic |
| GTAGGTTCCATTCTGCCCAA+TGG | 0.486511 | 3.1:-82189510 | MS.gene32832:intron |
| TGATCACCAATCGATCCAAT+AGG | 0.490658 | 3.1:+82186208 | None:intergenic |
| TGAACCTCTCCCTTGGGAAG+TGG | 0.494094 | 3.1:+82188797 | None:intergenic |
| ATGCAGTCTTTCCGGTTCCA+GGG | 0.495649 | 3.1:+82189638 | None:intergenic |
| TTGGACAACGGACATCTCTA+AGG | 0.496930 | 3.1:-82185981 | MS.gene32832:intron |
| TGATGCCTTGATCAAGGAAA+AGG | 0.497216 | 3.1:-82189112 | MS.gene32832:intron |
| CATTAAAGGCCTAGGTCTTG+AGG | 0.497845 | 3.1:-82190032 | MS.gene32832:intron |
| AGGAACCAAGCAACTAAAGT+TGG | 0.499343 | 3.1:-82189148 | MS.gene32832:CDS |
| ATATATATTGAGGCAAATAG+TGG | 0.501344 | 3.1:-82188890 | MS.gene32832:CDS |
| AAATAGTGGGGCTGTGAAAA+GGG | 0.503086 | 3.1:-82188876 | MS.gene32832:CDS |
| GTGTTGCAGAACTTGTCCCT+GGG | 0.505714 | 3.1:-82186801 | MS.gene32832:CDS |
| TGCCAACGCGCGACCTCAAG+GGG | 0.510126 | 3.1:-82187363 | MS.gene32832:CDS |
| CTGCCAACGCGCGACCTCAA+GGG | 0.511088 | 3.1:-82187364 | MS.gene32832:CDS |
| GATATATGATGCCTTGATCA+AGG | 0.512614 | 3.1:-82189118 | MS.gene32832:CDS |
| AGTTTCTTCGGGAGAGAGCT+CGG | 0.512821 | 3.1:+82189236 | None:intergenic |
| GTTCCATTCTGCCCAATGGT+TGG | 0.513570 | 3.1:-82189506 | MS.gene32832:CDS |
| CTTGGGATATGTCAGGAGCT+TGG | 0.517088 | 3.1:-82189610 | MS.gene32832:CDS |
| GAAAATAAGGAAGTATATGA+AGG | 0.518525 | 3.1:-82189401 | MS.gene32832:CDS |
| TATATATTGAGGCAAATAGT+GGG | 0.524529 | 3.1:-82188889 | MS.gene32832:CDS |
| ATTAGCACTTGGGATATGTC+AGG | 0.527405 | 3.1:-82189617 | MS.gene32832:CDS |
| ATAGAGGAATATGCACTGTA+AGG | 0.528143 | 3.1:-82186591 | MS.gene32832:intron |
| CCCACAAACCCAGAAGCAAA+AGG | 0.531554 | 3.1:+82189751 | None:intergenic |
| GAACCAACCATTGGGCAGAA+TGG | 0.533082 | 3.1:+82189503 | None:intergenic |
| ATACTTCTGAACCAACCATT+GGG | 0.533730 | 3.1:+82189495 | None:intergenic |
| CACACTGTGCAGGTAGCTGT+CGG | 0.538379 | 3.1:-82188920 | MS.gene32832:intron |
| TGGGTTTGTGGGACAAGCTG+AGG | 0.538586 | 3.1:-82189740 | MS.gene32832:CDS |
| ATCTTGGCAACAACGCTCGC+AGG | 0.542251 | 3.1:+82185862 | None:intergenic |
| CGGGGATGTTATATATATTG+AGG | 0.543594 | 3.1:-82188900 | MS.gene32832:CDS |
| GGAAAGACTGCATTAGCACT+TGG | 0.544549 | 3.1:-82189628 | MS.gene32832:CDS |
| GGAGAAGATGAAAATTGAAG+AGG | 0.545555 | 3.1:-82190098 | MS.gene32832:CDS |
| ATCAAGGCATCATATATCGT+GGG | 0.547921 | 3.1:+82189123 | None:intergenic |
| CCAGAAGAAGATGGCTGGCA+AGG | 0.548161 | 3.1:-82189680 | MS.gene32832:CDS |
| TGCAGTCTTTCCGGTTCCAG+GGG | 0.550380 | 3.1:+82189639 | None:intergenic |
| TATACTTCTGAACCAACCAT+TGG | 0.554977 | 3.1:+82189494 | None:intergenic |
| ACTGATATGACCAGTCCTCA+TGG | 0.558629 | 3.1:-82186243 | MS.gene32832:CDS |
| GTCAACCGATATATCGATGA+AGG | 0.558745 | 3.1:-82186823 | MS.gene32832:CDS |
| AACAGGTATCCCATGAGGAC+TGG | 0.560377 | 3.1:+82186233 | None:intergenic |
| TGTTGACCTATTGGATCGAT+TGG | 0.564185 | 3.1:-82186214 | MS.gene32832:CDS |
| ATGTCAGGAGCTTGGGACCA+AGG | 0.564237 | 3.1:-82189602 | MS.gene32832:intron |
| CATGATACGCCAGAAGAAGA+TGG | 0.565068 | 3.1:-82189689 | MS.gene32832:CDS |
| TCGTCAATAAACAGAACCCC+AGG | 0.567100 | 3.1:+82186784 | None:intergenic |
| ATTGGATTGAAGACAGTGAA+AGG | 0.567859 | 3.1:-82189168 | MS.gene32832:CDS |
| CAAGTTCCTCCACTTGAGCT+CGG | 0.568699 | 3.1:+82186040 | None:intergenic |
| TGGCAGCATCCAAATCATGT+AGG | 0.570363 | 3.1:+82187381 | None:intergenic |
| TGGGGTTCTGTTTATTGACG+AGG | 0.574623 | 3.1:-82186782 | MS.gene32832:intron |
| GGCAGCATCCAAATCATGTA+GGG | 0.577366 | 3.1:+82187382 | None:intergenic |
| AATTATTTCAGCTGGACCGT+AGG | 0.577744 | 3.1:+82186173 | None:intergenic |
| TGTTCCACTTCCCAAGGGAG+AGG | 0.578685 | 3.1:-82188801 | MS.gene32832:CDS |
| GGAGGAACTTGCTGTGGATG+AGG | 0.580534 | 3.1:-82186028 | MS.gene32832:CDS |
| CACTGTGCAGGTAGCTGTCG+GGG | 0.583392 | 3.1:-82188918 | MS.gene32832:intron |
| CTGATATGACCAGTCCTCAT+GGG | 0.583750 | 3.1:-82186242 | MS.gene32832:CDS |
| ATACGCCAGAAGAAGATGGC+TGG | 0.584035 | 3.1:-82189685 | MS.gene32832:CDS |
| AAGAGAAGCGTGTGGCCTTG+TGG | 0.587053 | 3.1:-82189716 | MS.gene32832:CDS |
| GAAAGACTGCATTAGCACTT+GGG | 0.592181 | 3.1:-82189627 | MS.gene32832:CDS |
| TGAGTTTGACCTTGAAGCTG+AGG | 0.593567 | 3.1:-82188828 | MS.gene32832:CDS |
| AGTGGGGCTGTGAAAAGGGT+TGG | 0.593627 | 3.1:-82188872 | MS.gene32832:CDS |
| GGAGTATGTTCCACTTCCCA+AGG | 0.593628 | 3.1:-82188807 | MS.gene32832:CDS |
| CACACTCACATTAAAGGCCT+AGG | 0.594901 | 3.1:-82190040 | MS.gene32832:CDS |
| TCTAGCTATCCGAGCTCAAG+TGG | 0.596118 | 3.1:-82186049 | MS.gene32832:CDS |
| TGGGCCAGATGATGAAACCT+AGG | 0.605557 | 3.1:-82187319 | MS.gene32832:CDS |
| GATCAAGGCATCATATATCG+TGG | 0.609216 | 3.1:+82189122 | None:intergenic |
| GATGATGAAACCTAGGAAGA+CGG | 0.610580 | 3.1:-82187312 | MS.gene32832:CDS |
| ATCATTCGAACACAAACCTA+CGG | 0.612451 | 3.1:-82186189 | MS.gene32832:CDS |
| GAGAACAAACCTCAAGACCT+AGG | 0.613415 | 3.1:+82190023 | None:intergenic |
| GGCGTATCATGTCGACCACA+AGG | 0.614191 | 3.1:+82189701 | None:intergenic |
| TAAGGAAGTATATGAAGGCG+AGG | 0.615764 | 3.1:-82189396 | MS.gene32832:intron |
| TCAAGTGGAGGAACTTGCTG+TGG | 0.623698 | 3.1:-82186034 | MS.gene32832:CDS |
| CCAACGCGCGACCTCAAGGG+GGG | 0.640330 | 3.1:-82187361 | MS.gene32832:CDS |
| TCCGTTGTCCAATCTCCCCA+AGG | 0.641969 | 3.1:+82185992 | None:intergenic |
| TGTTGCAGAACTTGTCCCTG+GGG | 0.644580 | 3.1:-82186800 | MS.gene32832:CDS |
| AGCTATCCGAGCTCAAGTGG+AGG | 0.646357 | 3.1:-82186046 | MS.gene32832:CDS |
| CAGTAGCAAAAGCATCACTT+CGG | 0.650349 | 3.1:+82188849 | None:intergenic |
| GCCAACGCGCGACCTCAAGG+GGG | 0.651411 | 3.1:-82187362 | MS.gene32832:CDS |
| TCTTCAATCCAATTATCACA+TGG | 0.652745 | 3.1:+82189178 | None:intergenic |
| TGGCAGAGACAACATCTGCA+AGG | 0.661224 | 3.1:-82185836 | MS.gene32832:intron |
| TCCTTGGGGAGATTGGACAA+CGG | 0.674974 | 3.1:-82185993 | MS.gene32832:CDS |
| TGGTTCAGAAGTATACTCAA+CGG | 0.677153 | 3.1:-82189486 | MS.gene32832:CDS |
| GAGTATGTTCCACTTCCCAA+GGG | 0.680518 | 3.1:-82188806 | MS.gene32832:CDS |
| GCAGTCTTTCCGGTTCCAGG+GGG | 0.687329 | 3.1:+82189640 | None:intergenic |
| ATATATTGAGGCAAATAGTG+GGG | 0.693226 | 3.1:-82188888 | MS.gene32832:CDS |
| TCAAGGCATCATATATCGTG+GGG | 0.702794 | 3.1:+82189124 | None:intergenic |
| CGTCAATAAACAGAACCCCA+GGG | 0.715606 | 3.1:+82186785 | None:intergenic |
| GGAAAGCTTAGCTTTCCTTG+GGG | 0.716854 | 3.1:-82186007 | MS.gene32832:CDS |
| GCTGAGGCAAGAGAAGCGTG+TGG | 0.722369 | 3.1:-82189724 | MS.gene32832:CDS |
| GAAACTGAGAGTATAACAGG+AGG | 0.727490 | 3.1:-82189219 | MS.gene32832:CDS |
| AGGTCAACAGGTATCCCATG+AGG | 0.730084 | 3.1:+82186228 | None:intergenic |
| AACGGAAGTAAAGAAGACTG+AGG | 0.746413 | 3.1:-82189468 | MS.gene32832:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATAAAATAAAGCTT+AGG | - | chr3.1:82187248-82187267 | MS.gene32832:intron | 10.0% |
| !! | TTCATTTATTAAAATGAAAT+TGG | - | chr3.1:82188801-82188820 | MS.gene32832:CDS | 10.0% |
| !!! | TTTGTTTTATACTTTTATTT+GGG | - | chr3.1:82186732-82186751 | MS.gene32832:intron | 10.0% |
| !!! | TTTTAAATCTATACAAATAT+TGG | - | chr3.1:82186778-82186797 | MS.gene32832:intron | 10.0% |
| !!! | TTTTGTTTTATACTTTTATT+TGG | - | chr3.1:82186731-82186750 | MS.gene32832:intron | 10.0% |
| !! | GAAAAAAACTTATTAAATTG+AGG | + | chr3.1:82185764-82185783 | None:intergenic | 15.0% |
| !!! | TCATTTTTAATTTATGTTTC+TGG | - | chr3.1:82187865-82187884 | MS.gene32832:intron | 15.0% |
| !! | AAAAGTTTCTTAACACAAAA+TGG | - | chr3.1:82189389-82189408 | MS.gene32832:intron | 20.0% |
| !! | AAACATTAAGCAAATTTCTA+TGG | - | chr3.1:82188193-82188212 | MS.gene32832:intron | 20.0% |
| !! | ACATCACATGAATATAATAA+TGG | + | chr3.1:82187026-82187045 | None:intergenic | 20.0% |
| !! | ATTTGTGTATGTATAGATAA+TGG | - | chr3.1:82187315-82187334 | MS.gene32832:CDS | 20.0% |
| !! | GTAAATTATATTTGAATCCT+TGG | - | chr3.1:82187067-82187086 | MS.gene32832:intron | 20.0% |
| !! | GTTTAAATAAAATTTGTCAG+AGG | - | chr3.1:82188256-82188275 | MS.gene32832:intron | 20.0% |
| !! | GTTTAATTGTTTAACTAGAA+GGG | - | chr3.1:82188530-82188549 | MS.gene32832:intron | 20.0% |
| !! | TGTTTAATTGTTTAACTAGA+AGG | - | chr3.1:82188529-82188548 | MS.gene32832:intron | 20.0% |
| !! | TTTAATTGTTTAACTAGAAG+GGG | - | chr3.1:82188531-82188550 | MS.gene32832:intron | 20.0% |
| !!! | AAGAATACAAGAATGATTTT+TGG | + | chr3.1:82186190-82186209 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTGATGTGATTT+TGG | - | chr3.1:82186485-82186504 | MS.gene32832:intron | 20.0% |
| !!! | AATAAATTTTGATTGTCCTT+GGG | - | chr3.1:82188754-82188773 | MS.gene32832:intron | 20.0% |
| !!! | ATTCTTTTCTCTTTTTTGAA+AGG | - | chr3.1:82186685-82186704 | MS.gene32832:intron | 20.0% |
| !!! | TGAAATTTGTTCACTTTATT+TGG | - | chr3.1:82190044-82190063 | MS.gene32832:CDS | 20.0% |
| !!! | TTATGTTACCTTTTTTCATT+TGG | - | chr3.1:82188686-82188705 | MS.gene32832:intron | 20.0% |
| !!! | TTGATTTTTTTTGTTCTCAA+AGG | - | chr3.1:82188348-82188367 | MS.gene32832:intron | 20.0% |
| !!! | TTTTATACTTTTATTTGGGT+GGG | - | chr3.1:82186736-82186755 | MS.gene32832:intron | 20.0% |
| !!! | TTTTATTTTTTTCAGAGCTA+AGG | + | chr3.1:82187240-82187259 | None:intergenic | 20.0% |
| ! | AAAACCAGTGTTATAAATAG+CGG | + | chr3.1:82188118-82188137 | None:intergenic | 25.0% |
| ! | AAGAAATAAGCAAAAGGATT+TGG | + | chr3.1:82185891-82185910 | None:intergenic | 25.0% |
| ! | AATCTCATTTCTTAGATTGT+TGG | + | chr3.1:82188719-82188738 | None:intergenic | 25.0% |
| ! | AGCATTAGAACTTCATTAAA+TGG | + | chr3.1:82189054-82189073 | None:intergenic | 25.0% |
| ! | ATATATATTGAGGCAAATAG+TGG | - | chr3.1:82186869-82186888 | MS.gene32832:intron | 25.0% |
| ! | ATTAAGACCTCAAAAATGAT+GGG | + | chr3.1:82189279-82189298 | None:intergenic | 25.0% |
| ! | ATTTATTTATACCGCTTTGT+AGG | - | chr3.1:82186231-82186250 | MS.gene32832:CDS | 25.0% |
| ! | CTATACCACTATTACATATA+GGG | - | chr3.1:82187566-82187585 | MS.gene32832:intron | 25.0% |
| ! | GAAATAATTCAGGTAAATGA+TGG | - | chr3.1:82189600-82189619 | MS.gene32832:intron | 25.0% |
| ! | GTTGAGACAAGAAATTAATA+AGG | - | chr3.1:82188483-82188502 | MS.gene32832:intron | 25.0% |
| ! | GTTTACAAAAATGCTTATGT+TGG | - | chr3.1:82188904-82188923 | MS.gene32832:CDS | 25.0% |
| ! | TAAATAAAATTTGTCAGAGG+AGG | - | chr3.1:82188259-82188278 | MS.gene32832:intron | 25.0% |
| ! | TAGCAACTCAATTAGTTAAA+GGG | + | chr3.1:82189995-82190014 | None:intergenic | 25.0% |
| ! | TATATATTGAGGCAAATAGT+GGG | - | chr3.1:82186870-82186889 | MS.gene32832:intron | 25.0% |
| ! | TATATGTAATAGTGGTATAG+CGG | + | chr3.1:82187566-82187585 | None:intergenic | 25.0% |
| ! | TCTACGTATTAAGGAAAATA+AGG | - | chr3.1:82186345-82186364 | MS.gene32832:intron | 25.0% |
| !! | CAAGATATTTTGTCTCTTAT+GGG | - | chr3.1:82188421-82188440 | MS.gene32832:intron | 25.0% |
| !! | GAAAATAAGGAAGTATATGA+AGG | - | chr3.1:82186358-82186377 | MS.gene32832:intron | 25.0% |
| !! | GTTATTTAACGTTTTCCTTT+CGG | - | chr3.1:82189820-82189839 | MS.gene32832:intron | 25.0% |
| !! | GTTTTCTTCCAAATGAAAAA+AGG | + | chr3.1:82188697-82188716 | None:intergenic | 25.0% |
| !! | TATTTCTCATATCGGATTTT+TGG | - | chr3.1:82188071-82188090 | MS.gene32832:intron | 25.0% |
| !! | TTCTTATGGAAAATTTTCGA+CGG | - | chr3.1:82186314-82186333 | MS.gene32832:intron | 25.0% |
| !!! | AGCTTAGGATATAATTTGTT+TGG | - | chr3.1:82187263-82187282 | MS.gene32832:intron | 25.0% |
| !!! | CAATAAATTTTGATTGTCCT+TGG | - | chr3.1:82188753-82188772 | MS.gene32832:intron | 25.0% |
| !!! | CACTTTTTCAATTTCTGTTT+AGG | - | chr3.1:82187954-82187973 | MS.gene32832:intron | 25.0% |
| !!! | GACTGTTTTTTTTTTACAGA+GGG | - | chr3.1:82189493-82189512 | MS.gene32832:CDS | 25.0% |
| !!! | GCTTAGGATATAATTTGTTT+GGG | - | chr3.1:82187264-82187283 | MS.gene32832:intron | 25.0% |
| !!! | GTTTTATACTTTTATTTGGG+TGG | - | chr3.1:82186735-82186754 | MS.gene32832:intron | 25.0% |
| !!! | GTTTTGTTTGAAGTTGATAA+TGG | - | chr3.1:82187161-82187180 | MS.gene32832:intron | 25.0% |
| !!! | TATGTGTTGTTTATCATATC+AGG | - | chr3.1:82189853-82189872 | MS.gene32832:intron | 25.0% |
| !!! | TGACTGTTTTTTTTTTACAG+AGG | - | chr3.1:82189492-82189511 | MS.gene32832:CDS | 25.0% |
| AAAATATGTAGCAGACAAAG+TGG | + | chr3.1:82186456-82186475 | None:intergenic | 30.0% | |
| AAATCCGATATGAGAAATAG+CGG | + | chr3.1:82188070-82188089 | None:intergenic | 30.0% | |
| AAGAATAACTATTATGCCCA+AGG | + | chr3.1:82188773-82188792 | None:intergenic | 30.0% | |
| AAGCAAAGGGTAAAAAATGT+AGG | - | chr3.1:82188850-82188869 | MS.gene32832:CDS | 30.0% | |
| ACATACACAAATAGTTGAAC+TGG | + | chr3.1:82187358-82187377 | None:intergenic | 30.0% | |
| ACTAAATAGCATCTTCATGA+TGG | + | chr3.1:82188665-82188684 | None:intergenic | 30.0% | |
| ACTTGTGAACAAAAAAGCAA+AGG | - | chr3.1:82188836-82188855 | MS.gene32832:CDS | 30.0% | |
| AGTAATGCACAAAAGCTTAA+AGG | - | chr3.1:82188234-82188253 | MS.gene32832:intron | 30.0% | |
| ATATATTGAGGCAAATAGTG+GGG | - | chr3.1:82186871-82186890 | MS.gene32832:intron | 30.0% | |
| ATGAAACCTGATTCATAGTA+CGG | + | chr3.1:82187100-82187119 | None:intergenic | 30.0% | |
| ATGCAAATAAGTGTGTATGT+TGG | + | chr3.1:82189684-82189703 | None:intergenic | 30.0% | |
| CAAATCCCTATATGTAATAG+TGG | + | chr3.1:82187574-82187593 | None:intergenic | 30.0% | |
| CAAGAAAAAAGAGATTGTTC+AGG | - | chr3.1:82186985-82187004 | MS.gene32832:intron | 30.0% | |
| CACTATTACATATAGGGATT+TGG | - | chr3.1:82187572-82187591 | MS.gene32832:intron | 30.0% | |
| CATAGCAAGAAATAAGCAAA+AGG | + | chr3.1:82185897-82185916 | None:intergenic | 30.0% | |
| CTCATTTGGATCTATTGTTA+AGG | + | chr3.1:82185825-82185844 | None:intergenic | 30.0% | |
| CTTGTGAACAAAAAAGCAAA+GGG | - | chr3.1:82188837-82188856 | MS.gene32832:CDS | 30.0% | |
| GATGGAAAACTTTCTTACAA+TGG | + | chr3.1:82187418-82187437 | None:intergenic | 30.0% | |
| GATTAAGACCTCAAAAATGA+TGG | + | chr3.1:82189280-82189299 | None:intergenic | 30.0% | |
| GCATTACTAGAAGAAAAGTA+CGG | + | chr3.1:82188222-82188241 | None:intergenic | 30.0% | |
| GCTATACCACTATTACATAT+AGG | - | chr3.1:82187565-82187584 | MS.gene32832:intron | 30.0% | |
| GCTATTTGAAAGAAGGTTAA+GGG | + | chr3.1:82189626-82189645 | None:intergenic | 30.0% | |
| GGAGTGATATAAAAACAAGA+AGG | - | chr3.1:82188871-82188890 | MS.gene32832:CDS | 30.0% | |
| GTAGCAACTCAATTAGTTAA+AGG | + | chr3.1:82189996-82190015 | None:intergenic | 30.0% | |
| TCTTACAATGGTCAAATATC+AGG | + | chr3.1:82187406-82187425 | None:intergenic | 30.0% | |
| TCTTCAATCCAATTATCACA+TGG | + | chr3.1:82186584-82186603 | None:intergenic | 30.0% | |
| TGTTATACTCTCAGTTTCTT+CGG | + | chr3.1:82186538-82186557 | None:intergenic | 30.0% | |
| TTGAAAGGCTATTTGAAAGA+AGG | + | chr3.1:82189633-82189652 | None:intergenic | 30.0% | |
| TTTACCTGAATTATTTCAGC+TGG | + | chr3.1:82189597-82189616 | None:intergenic | 30.0% | |
| TTTGTGGCAAAGATTACTAT+TGG | + | chr3.1:82189149-82189168 | None:intergenic | 30.0% | |
| ! | AAAATAGAATAGTGCTGAGT+TGG | - | chr3.1:82187709-82187728 | MS.gene32832:intron | 30.0% |
| ! | AAGTTCTAATGCTTCTTTAC+AGG | - | chr3.1:82189061-82189080 | MS.gene32832:intron | 30.0% |
| ! | ACAATTGCAGGCTTTAATTA+GGG | + | chr3.1:82189024-82189043 | None:intergenic | 30.0% |
| ! | ATTCTACAGCTTTGATACAT+GGG | - | chr3.1:82186809-82186828 | MS.gene32832:CDS | 30.0% |
| ! | GCAAGATATTTTGTCTCTTA+TGG | - | chr3.1:82188420-82188439 | MS.gene32832:intron | 30.0% |
| ! | TACAATTGCAGGCTTTAATT+AGG | + | chr3.1:82189025-82189044 | None:intergenic | 30.0% |
| ! | TAGAGAATTTAAGCATTGCA+AGG | - | chr3.1:82187379-82187398 | MS.gene32832:CDS | 30.0% |
| ! | TCTCTGTTTTCATGATTAGT+TGG | - | chr3.1:82189361-82189380 | MS.gene32832:intron | 30.0% |
| ! | TCTTATGGAAAATTTTCGAC+GGG | - | chr3.1:82186315-82186334 | MS.gene32832:intron | 30.0% |
| ! | TGATTTTGCAGTATCTCAAT+GGG | - | chr3.1:82189333-82189352 | MS.gene32832:intron | 30.0% |
| ! | TGTATTAAGTTTTGCTGAAG+TGG | - | chr3.1:82189210-82189229 | MS.gene32832:CDS | 30.0% |
| ! | TTTGAGGTCTTAATCTTCTT+CGG | - | chr3.1:82189285-82189304 | MS.gene32832:intron | 30.0% |
| !! | CAAAGGCTCTGAATTAAAAT+TGG | - | chr3.1:82187506-82187525 | MS.gene32832:intron | 30.0% |
| !! | CTCTGTTTTCATGATTAGTT+GGG | - | chr3.1:82189362-82189381 | MS.gene32832:intron | 30.0% |
| !! | GAAAATATTTTTGCAGAGTC+TGG | + | chr3.1:82188286-82188305 | None:intergenic | 30.0% |
| !! | GTTTGGTTATTGTTTTGTTC+AGG | - | chr3.1:82185968-82185987 | MS.gene32832:intron | 30.0% |
| !! | TCTGTTTTCATGATTAGTTG+GGG | - | chr3.1:82189363-82189382 | MS.gene32832:intron | 30.0% |
| !!! | ACTGTTTTGAAATTTGTAGG+CGG | - | chr3.1:82190014-82190033 | MS.gene32832:intron | 30.0% |
| !!! | ATTTTAATTCAGAGCCTTTG+CGG | + | chr3.1:82187506-82187525 | None:intergenic | 30.0% |
| !!! | CAACTACTTGTTTTTTGGTT+TGG | - | chr3.1:82185951-82185970 | MS.gene32832:intron | 30.0% |
| !!! | GCTAACAACTACTTGTTTTT+TGG | - | chr3.1:82185946-82185965 | MS.gene32832:intron | 30.0% |
| !!! | GCTACTGTTTTGAAATTTGT+AGG | - | chr3.1:82190011-82190030 | MS.gene32832:intron | 30.0% |
| !!! | TATTTTTTTCAGAGCTAAGG+AGG | + | chr3.1:82187237-82187256 | None:intergenic | 30.0% |
| !!! | TGATTTTTGGTACAAAACCT+TGG | + | chr3.1:82186177-82186196 | None:intergenic | 30.0% |
| AAAAGTCACCACTATTGCAA+TGG | + | chr3.1:82187640-82187659 | None:intergenic | 35.0% | |
| AAAGAAGACTGAGGTTCTTA+TGG | - | chr3.1:82186300-82186319 | MS.gene32832:intron | 35.0% | |
| AATGGATGCAATACAATTGC+AGG | + | chr3.1:82189036-82189055 | None:intergenic | 35.0% | |
| ACATATAAGTCACATCCGAA+AGG | + | chr3.1:82189838-82189857 | None:intergenic | 35.0% | |
| AGAGTTGTTGTCATGTAATC+AGG | - | chr3.1:82188572-82188591 | MS.gene32832:intron | 35.0% | |
| AGTATCAGCCATGTGATAAT+TGG | - | chr3.1:82186573-82186592 | MS.gene32832:intron | 35.0% | |
| AGTGCATATTCCTCTATTTG+TGG | + | chr3.1:82189165-82189184 | None:intergenic | 35.0% | |
| ATAAGTTCAAACACCTGGTA+AGG | - | chr3.1:82188597-82188616 | MS.gene32832:intron | 35.0% | |
| ATACTTCTGAACCAACCATT+GGG | + | chr3.1:82186267-82186286 | None:intergenic | 35.0% | |
| ATAGAGGAATATGCACTGTA+AGG | - | chr3.1:82189168-82189187 | MS.gene32832:CDS | 35.0% | |
| ATCATTCGAACACAAACCTA+CGG | - | chr3.1:82189570-82189589 | MS.gene32832:intron | 35.0% | |
| ATGAAGTGATGAGAGAAGAT+GGG | + | chr3.1:82187811-82187830 | None:intergenic | 35.0% | |
| ATTGGATTGAAGACAGTGAA+AGG | - | chr3.1:82186591-82186610 | MS.gene32832:intron | 35.0% | |
| CAACACCTTCATCGATATAT+CGG | + | chr3.1:82188944-82188963 | None:intergenic | 35.0% | |
| CAACTCTGACTGATATGTAA+AGG | + | chr3.1:82188559-82188578 | None:intergenic | 35.0% | |
| CAATCCGCTATTTATAACAC+TGG | - | chr3.1:82188111-82188130 | MS.gene32832:intron | 35.0% | |
| CATATAGATGATAACAGCGT+AGG | - | chr3.1:82187187-82187206 | MS.gene32832:intron | 35.0% | |
| CATTGAGATACTGCAAAATC+AGG | + | chr3.1:82189334-82189353 | None:intergenic | 35.0% | |
| CATTTACTTCAACCACTTTG+CGG | - | chr3.1:82188018-82188037 | MS.gene32832:intron | 35.0% | |
| CGGGGATGTTATATATATTG+AGG | - | chr3.1:82186859-82186878 | MS.gene32832:intron | 35.0% | |
| CTTGTTAAAACTGGGAATCT+GGG | - | chr3.1:82186404-82186423 | MS.gene32832:intron | 35.0% | |
| GATAAACCGTACTATGAATC+AGG | - | chr3.1:82187091-82187110 | MS.gene32832:intron | 35.0% | |
| GATATATGATGCCTTGATCA+AGG | - | chr3.1:82186641-82186660 | MS.gene32832:CDS | 35.0% | |
| GGAGAAGATGAAAATTGAAG+AGG | - | chr3.1:82185661-82185680 | MS.gene32832:CDS | 35.0% | |
| GGCTATTTGAAAGAAGGTTA+AGG | + | chr3.1:82189627-82189646 | None:intergenic | 35.0% | |
| GTAATCTTTGCCACAAATAG+AGG | - | chr3.1:82189152-82189171 | MS.gene32832:CDS | 35.0% | |
| GTGATTCCCTTGTTAAAACT+GGG | - | chr3.1:82186396-82186415 | MS.gene32832:intron | 35.0% | |
| GTTATACTCTCAGTTTCTTC+GGG | + | chr3.1:82186537-82186556 | None:intergenic | 35.0% | |
| TATACTTCTGAACCAACCAT+TGG | + | chr3.1:82186268-82186287 | None:intergenic | 35.0% | |
| TATGAAGTGATGAGAGAAGA+TGG | + | chr3.1:82187812-82187831 | None:intergenic | 35.0% | |
| TGAACTGGAAGCAATCAAAA+TGG | + | chr3.1:82187343-82187362 | None:intergenic | 35.0% | |
| TGTGATTCCCTTGTTAAAAC+TGG | - | chr3.1:82186395-82186414 | MS.gene32832:intron | 35.0% | |
| ! | ATCAAGGCATCATATATCGT+GGG | + | chr3.1:82186639-82186658 | None:intergenic | 35.0% |
| ! | CATTCTACAGCTTTGATACA+TGG | - | chr3.1:82186808-82186827 | MS.gene32832:CDS | 35.0% |
| ! | CTGATTTTGCAGTATCTCAA+TGG | - | chr3.1:82189332-82189351 | MS.gene32832:intron | 35.0% |
| ! | GAAGAAACTGAGAGTATAAC+AGG | - | chr3.1:82186537-82186556 | MS.gene32832:intron | 35.0% |
| ! | GATTTTGCAGTATCTCAATG+GGG | - | chr3.1:82189334-82189353 | MS.gene32832:intron | 35.0% |
| ! | TCTTTTCGTGAAAGATGATG+AGG | - | chr3.1:82188169-82188188 | MS.gene32832:intron | 35.0% |
| ! | TGGTTCAGAAGTATACTCAA+CGG | - | chr3.1:82186273-82186292 | MS.gene32832:intron | 35.0% |
| ! | TGTATTTTTCTTGCTGCTCT+TGG | + | chr3.1:82190095-82190114 | None:intergenic | 35.0% |
| !! | AAAATGCTTATGTTGGTGAC+AGG | - | chr3.1:82188911-82188930 | MS.gene32832:CDS | 35.0% |
| !! | AGCGTAGGATATAGTTTGTT+TGG | - | chr3.1:82187202-82187221 | MS.gene32832:intron | 35.0% |
| !! | CAGATTCCCAGTTTTAACAA+GGG | + | chr3.1:82186405-82186424 | None:intergenic | 35.0% |
| !! | CGTAGGATATAGTTTGTTTG+GGG | - | chr3.1:82187204-82187223 | MS.gene32832:intron | 35.0% |
| !! | CTCTAAAGCACGATTAAGAT+AGG | + | chr3.1:82189114-82189133 | None:intergenic | 35.0% |
| !! | GCGTAGGATATAGTTTGTTT+GGG | - | chr3.1:82187203-82187222 | MS.gene32832:intron | 35.0% |
| !! | GTGTTATAAATAGCGGATTG+CGG | + | chr3.1:82188111-82188130 | None:intergenic | 35.0% |
| !! | TATTGTTTTGTTCAGGTCAG+TGG | - | chr3.1:82185975-82185994 | MS.gene32832:intron | 35.0% |
| !! | TCTAGACACTTGCTATATAC+TGG | - | chr3.1:82188304-82188323 | MS.gene32832:intron | 35.0% |
| !!! | GGCAACATTTTGATTGTTTC+TGG | - | chr3.1:82187285-82187304 | MS.gene32832:CDS | 35.0% |
| AACGGAAGTAAAGAAGACTG+AGG | - | chr3.1:82186291-82186310 | MS.gene32832:intron | 40.0% | |
| AAGTGCTAATGCAGTCTTTC+CGG | + | chr3.1:82186132-82186151 | None:intergenic | 40.0% | |
| AATCGATCCAATAGGTCAAC+AGG | + | chr3.1:82189546-82189565 | None:intergenic | 40.0% | |
| AATTATTTCAGCTGGACCGT+AGG | + | chr3.1:82189589-82189608 | None:intergenic | 40.0% | |
| ACAGGTGCATATGCTAGATA+TGG | - | chr3.1:82189079-82189098 | MS.gene32832:intron | 40.0% | |
| ACATAAAGTCTGCCCATTGT+GGG | + | chr3.1:82188637-82188656 | None:intergenic | 40.0% | |
| ACTGCAAAATCAGGTCTTCT+AGG | + | chr3.1:82189325-82189344 | None:intergenic | 40.0% | |
| AGCAGACAAAGTGGTAACAA+GGG | + | chr3.1:82186447-82186466 | None:intergenic | 40.0% | |
| AGCGTTGTTGCCAAGATAAA+TGG | - | chr3.1:82189903-82189922 | MS.gene32832:intron | 40.0% | |
| AGGAACCAAGCAACTAAAGT+TGG | - | chr3.1:82186611-82186630 | MS.gene32832:CDS | 40.0% | |
| AGGTCATAAGTTCAAACACC+TGG | - | chr3.1:82188592-82188611 | MS.gene32832:intron | 40.0% | |
| ATTAGCACTTGGGATATGTC+AGG | - | chr3.1:82186142-82186161 | MS.gene32832:intron | 40.0% | |
| CACACAAATCTGTGCTCATT+TGG | + | chr3.1:82185839-82185858 | None:intergenic | 40.0% | |
| CCTTGTTAAAACTGGGAATC+TGG | - | chr3.1:82186403-82186422 | MS.gene32832:intron | 40.0% | |
| CTTTGCGGAGTAACATCTTA+GGG | + | chr3.1:82187491-82187510 | None:intergenic | 40.0% | |
| GAAAGACTGCATTAGCACTT+GGG | - | chr3.1:82186132-82186151 | MS.gene32832:intron | 40.0% | |
| GATGATGAAACCTAGGAAGA+CGG | - | chr3.1:82188447-82188466 | MS.gene32832:intron | 40.0% | |
| GCTACTCACACTCACATTAA+AGG | - | chr3.1:82185713-82185732 | MS.gene32832:CDS | 40.0% | |
| GGATGTAACCCTACATGATT+TGG | - | chr3.1:82188369-82188388 | MS.gene32832:intron | 40.0% | |
| GTCAACCGATATATCGATGA+AGG | - | chr3.1:82188936-82188955 | MS.gene32832:intron | 40.0% | |
| TAGCAGACAAAGTGGTAACA+AGG | + | chr3.1:82186448-82186467 | None:intergenic | 40.0% | |
| TCTTCCTAGGTTTCATCATC+TGG | + | chr3.1:82188447-82188466 | None:intergenic | 40.0% | |
| TGAAGTGATGAGAGAAGATG+GGG | + | chr3.1:82187810-82187829 | None:intergenic | 40.0% | |
| TGATCACCAATCGATCCAAT+AGG | + | chr3.1:82189554-82189573 | None:intergenic | 40.0% | |
| TGATGCCTTGATCAAGGAAA+AGG | - | chr3.1:82186647-82186666 | MS.gene32832:CDS | 40.0% | |
| TGTTGACCTATTGGATCGAT+TGG | - | chr3.1:82189545-82189564 | MS.gene32832:intron | 40.0% | |
| TTAGTGATGAGAGGTTACCT+AGG | + | chr3.1:82187774-82187793 | None:intergenic | 40.0% | |
| TTCTGCTACCATTGCAATAG+TGG | - | chr3.1:82187629-82187648 | MS.gene32832:intron | 40.0% | |
| ! | AAATAGTGGGGCTGTGAAAA+GGG | - | chr3.1:82186883-82186902 | MS.gene32832:intron | 40.0% |
| ! | AGGAAAGCTTAGCTTTCCTT+GGG | - | chr3.1:82189751-82189770 | MS.gene32832:CDS | 40.0% |
| ! | GAAACTGAGAGTATAACAGG+AGG | - | chr3.1:82186540-82186559 | MS.gene32832:intron | 40.0% |
| ! | GAGAGTATAACAGGAGGTTA+TGG | - | chr3.1:82186546-82186565 | MS.gene32832:intron | 40.0% |
| ! | GATCAAGGCATCATATATCG+TGG | + | chr3.1:82186640-82186659 | None:intergenic | 40.0% |
| ! | GTTGTCTCTGCCATTTATCT+TGG | + | chr3.1:82189916-82189935 | None:intergenic | 40.0% |
| ! | TAAGGAAGTATATGAAGGCG+AGG | - | chr3.1:82186363-82186382 | MS.gene32832:intron | 40.0% |
| ! | TCAAGGCATCATATATCGTG+GGG | + | chr3.1:82186638-82186657 | None:intergenic | 40.0% |
| ! | TTACACATGCCTGTTTGTTG+CGG | - | chr3.1:82185859-82185878 | MS.gene32832:CDS | 40.0% |
| !! | AAACTGGGAATCTGGGATTT+TGG | - | chr3.1:82186411-82186430 | MS.gene32832:intron | 40.0% |
| !! | ACTTTTATTTGGGTGGGAAC+TGG | - | chr3.1:82186742-82186761 | MS.gene32832:intron | 40.0% |
| !! | ATTCTAAAGCAGACCCACAA+TGG | - | chr3.1:82188621-82188640 | MS.gene32832:intron | 40.0% |
| !! | CAGTAGCAAAAGCATCACTT+CGG | + | chr3.1:82186913-82186932 | None:intergenic | 40.0% |
| !! | CCAGATTCCCAGTTTTAACA+AGG | + | chr3.1:82186406-82186425 | None:intergenic | 40.0% |
| !! | CTAGTAGCCCATCATTTTTG+AGG | - | chr3.1:82189269-82189288 | MS.gene32832:intron | 40.0% |
| !! | CTGTCCGCTATTTCTCATAT+CGG | - | chr3.1:82188063-82188082 | MS.gene32832:intron | 40.0% |
| !! | CTTTTATTTGGGTGGGAACT+GGG | - | chr3.1:82186743-82186762 | MS.gene32832:intron | 40.0% |
| !! | TAGCGGATTGCGGAAAATAA+CGG | + | chr3.1:82188101-82188120 | None:intergenic | 40.0% |
| !! | TTCTAAAGCAGACCCACAAT+GGG | - | chr3.1:82188622-82188641 | MS.gene32832:intron | 40.0% |
| !!! | GAAAATTTTCGACGGGCTAT+CGG | - | chr3.1:82186322-82186341 | MS.gene32832:intron | 40.0% |
| AAAATATCTTGCCCCCCTTG+AGG | + | chr3.1:82188412-82188431 | None:intergenic | 45.0% | |
| ACAGCATAGCGCGATATTAG+CGG | + | chr3.1:82188047-82188066 | None:intergenic | 45.0% | |
| ACTGATATGACCAGTCCTCA+TGG | - | chr3.1:82189516-82189535 | MS.gene32832:intron | 45.0% | |
| AGAGGAGGTTTAGTGATGAG+AGG | + | chr3.1:82187783-82187802 | None:intergenic | 45.0% | |
| AGTGGTAACAAGGGAATCAC+AGG | + | chr3.1:82186438-82186457 | None:intergenic | 45.0% | |
| ATGAGAGGTTACCTAGGTAG+TGG | + | chr3.1:82187768-82187787 | None:intergenic | 45.0% | |
| CACAATGGGCAGACTTTATG+TGG | - | chr3.1:82188636-82188655 | MS.gene32832:intron | 45.0% | |
| CACACTCACATTAAAGGCCT+AGG | - | chr3.1:82185719-82185738 | MS.gene32832:CDS | 45.0% | |
| CACATAAAGTCTGCCCATTG+TGG | + | chr3.1:82188638-82188657 | None:intergenic | 45.0% | |
| CATAGTACGGTTTATCGCCA+AGG | + | chr3.1:82187087-82187106 | None:intergenic | 45.0% | |
| CATGATACGCCAGAAGAAGA+TGG | - | chr3.1:82186070-82186089 | MS.gene32832:intron | 45.0% | |
| CATTAAAGGCCTAGGTCTTG+AGG | - | chr3.1:82185727-82185746 | MS.gene32832:CDS | 45.0% | |
| CCTAAGATGTTACTCCGCAA+AGG | - | chr3.1:82187489-82187508 | MS.gene32832:intron | 45.0% | |
| CCTTGATCAAGGAAAAGGTG+CGG | - | chr3.1:82186652-82186671 | MS.gene32832:CDS | 45.0% | |
| CCTTTGCGGAGTAACATCTT+AGG | + | chr3.1:82187492-82187511 | None:intergenic | 45.0% | |
| CGGTCCAGCTGAAATAATTC+AGG | - | chr3.1:82189590-82189609 | MS.gene32832:intron | 45.0% | |
| CGTCAATAAACAGAACCCCA+GGG | + | chr3.1:82188977-82188996 | None:intergenic | 45.0% | |
| CTGATATGACCAGTCCTCAT+GGG | - | chr3.1:82189517-82189536 | MS.gene32832:intron | 45.0% | |
| GAACATACTCCTCAGCTTCA+AGG | + | chr3.1:82186943-82186962 | None:intergenic | 45.0% | |
| GAGAACAAACCTCAAGACCT+AGG | + | chr3.1:82185739-82185758 | None:intergenic | 45.0% | |
| GAGTATGTTCCACTTCCCAA+GGG | - | chr3.1:82186953-82186972 | MS.gene32832:intron | 45.0% | |
| GCAGAATCGCAATAGCGTAT+CGG | + | chr3.1:82187615-82187634 | None:intergenic | 45.0% | |
| GCAGAATGGAACCTACAAAG+CGG | + | chr3.1:82186245-82186264 | None:intergenic | 45.0% | |
| GGAAAGACTGCATTAGCACT+TGG | - | chr3.1:82186131-82186150 | MS.gene32832:intron | 45.0% | |
| GGCAGCATCCAAATCATGTA+GGG | + | chr3.1:82188380-82188399 | None:intergenic | 45.0% | |
| GGCTATCGGTCTACGTATTA+AGG | - | chr3.1:82186336-82186355 | MS.gene32832:intron | 45.0% | |
| GTCTAGCAGAGGAACTAGTT+TGG | - | chr3.1:82187447-82187466 | MS.gene32832:intron | 45.0% | |
| TCAGTGATTTCCGTCTTCCT+AGG | + | chr3.1:82188460-82188479 | None:intergenic | 45.0% | |
| TCGTCAATAAACAGAACCCC+AGG | + | chr3.1:82188978-82188997 | None:intergenic | 45.0% | |
| TGAGAGGTTACCTAGGTAGT+GGG | + | chr3.1:82187767-82187786 | None:intergenic | 45.0% | |
| TGAGTTTGACCTTGAAGCTG+AGG | - | chr3.1:82186931-82186950 | MS.gene32832:intron | 45.0% | |
| TGGCAGCATCCAAATCATGT+AGG | + | chr3.1:82188381-82188400 | None:intergenic | 45.0% | |
| TGGGATACCTGTTGACCTAT+TGG | - | chr3.1:82189536-82189555 | MS.gene32832:intron | 45.0% | |
| TGGGGTTCTGTTTATTGACG+AGG | - | chr3.1:82188977-82188996 | MS.gene32832:intron | 45.0% | |
| TTCTTGTGAACCTCTCCCTT+GGG | + | chr3.1:82186971-82186990 | None:intergenic | 45.0% | |
| TTGGACAACGGACATCTCTA+AGG | - | chr3.1:82189778-82189797 | MS.gene32832:intron | 45.0% | |
| TTGGGATATGTCAGGAGCTT+GGG | - | chr3.1:82186150-82186169 | MS.gene32832:intron | 45.0% | |
| TTTCTTGTGAACCTCTCCCT+TGG | + | chr3.1:82186972-82186991 | None:intergenic | 45.0% | |
| ! | AAAGCAGTGCCTTTTGCTTC+TGG | - | chr3.1:82185999-82186018 | MS.gene32832:CDS | 45.0% |
| ! | AAGCAGTGCCTTTTGCTTCT+GGG | - | chr3.1:82186000-82186019 | MS.gene32832:CDS | 45.0% |
| ! | CAAATAGTGGGGCTGTGAAA+AGG | - | chr3.1:82186882-82186901 | MS.gene32832:intron | 45.0% |
| ! | CCTTTTGCTTCTGGGTTTGT+GGG | - | chr3.1:82186008-82186027 | MS.gene32832:CDS | 45.0% |
| ! | GAGGAAAGCTTAGCTTTCCT+TGG | - | chr3.1:82189750-82189769 | MS.gene32832:CDS | 45.0% |
| ! | GGAAAGCTTAGCTTTCCTTG+GGG | - | chr3.1:82189752-82189771 | MS.gene32832:CDS | 45.0% |
| ! | TACACATGCCTGTTTGTTGC+GGG | - | chr3.1:82185860-82185879 | MS.gene32832:CDS | 45.0% |
| ! | TAGCAGAGGAACTAGTTTGG+TGG | - | chr3.1:82187450-82187469 | MS.gene32832:intron | 45.0% |
| ! | TTAGCTTTCCTTGGGGAGAT+TGG | - | chr3.1:82189759-82189778 | MS.gene32832:CDS | 45.0% |
| !! | CTGCTTTAGAATGCCTTACC+AGG | + | chr3.1:82188613-82188632 | None:intergenic | 45.0% |
| !! | TACCTAGGTAGTGGGGTTTA+GGG | + | chr3.1:82187759-82187778 | None:intergenic | 45.0% |
| !! | TGTGATTTTGGTCCTGTGCA+AGG | - | chr3.1:82186497-82186516 | MS.gene32832:intron | 45.0% |
| !! | TTACCTAGGTAGTGGGGTTT+AGG | + | chr3.1:82187760-82187779 | None:intergenic | 45.0% |
| !! | ATGATAAAAATAATTAAAAT+AGG | + | chr3.1:82189451-82189470 | None:intergenic | 5.0% |
| AACAGGTATCCCATGAGGAC+TGG | + | chr3.1:82189529-82189548 | None:intergenic | 50.0% | |
| AATGCAGTCTTTCCGGTTCC+AGG | + | chr3.1:82186125-82186144 | None:intergenic | 50.0% | |
| AGGTCAACAGGTATCCCATG+AGG | + | chr3.1:82189534-82189553 | None:intergenic | 50.0% | |
| AGTGATGAGAGAAGATGGGG+AGG | + | chr3.1:82187807-82187826 | None:intergenic | 50.0% | |
| AGTTTCTTCGGGAGAGAGCT+CGG | + | chr3.1:82186526-82186545 | None:intergenic | 50.0% | |
| ATACGCCAGAAGAAGATGGC+TGG | - | chr3.1:82186074-82186093 | MS.gene32832:intron | 50.0% | |
| ATGCAGTCTTTCCGGTTCCA+GGG | + | chr3.1:82186124-82186143 | None:intergenic | 50.0% | |
| CAAGTTCCTCCACTTGAGCT+CGG | + | chr3.1:82189722-82189741 | None:intergenic | 50.0% | |
| CCCACAAACCCAGAAGCAAA+AGG | + | chr3.1:82186011-82186030 | None:intergenic | 50.0% | |
| CTGCTAGACTGCTATGCAGA+TGG | + | chr3.1:82187436-82187455 | None:intergenic | 50.0% | |
| CTTGGGATATGTCAGGAGCT+TGG | - | chr3.1:82186149-82186168 | MS.gene32832:intron | 50.0% | |
| GAACCAACCATTGGGCAGAA+TGG | + | chr3.1:82186259-82186278 | None:intergenic | 50.0% | |
| GAGAGGTTACCTAGGTAGTG+GGG | + | chr3.1:82187766-82187785 | None:intergenic | 50.0% | |
| GGAGTATGTTCCACTTCCCA+AGG | - | chr3.1:82186952-82186971 | MS.gene32832:intron | 50.0% | |
| GGGATTTATGCACACTGTGC+AGG | - | chr3.1:82186829-82186848 | MS.gene32832:CDS | 50.0% | |
| GGGGTCCAACTTTAGTTGCT+TGG | + | chr3.1:82186619-82186638 | None:intergenic | 50.0% | |
| GTAGGTTCCATTCTGCCCAA+TGG | - | chr3.1:82186249-82186268 | MS.gene32832:CDS | 50.0% | |
| GTGTTGCAGAACTTGTCCCT+GGG | - | chr3.1:82188958-82188977 | MS.gene32832:intron | 50.0% | |
| GTTCCATTCTGCCCAATGGT+TGG | - | chr3.1:82186253-82186272 | MS.gene32832:intron | 50.0% | |
| TATTAGCGGAAGCCGCAAAG+TGG | + | chr3.1:82188033-82188052 | None:intergenic | 50.0% | |
| TCCTTGGGGAGATTGGACAA+CGG | - | chr3.1:82189766-82189785 | MS.gene32832:CDS | 50.0% | |
| TCTAGCTATCCGAGCTCAAG+TGG | - | chr3.1:82189710-82189729 | MS.gene32832:CDS | 50.0% | |
| TCTGCATAGCAGTCTAGCAG+AGG | - | chr3.1:82187436-82187455 | MS.gene32832:intron | 50.0% | |
| TGGCAGAGACAACATCTGCA+AGG | - | chr3.1:82189923-82189942 | MS.gene32832:intron | 50.0% | |
| TGGGCCAGATGATGAAACCT+AGG | - | chr3.1:82188440-82188459 | MS.gene32832:intron | 50.0% | |
| TGGTTTCACCCGCAACAAAC+AGG | + | chr3.1:82185871-82185890 | None:intergenic | 50.0% | |
| TGTTGCAGAACTTGTCCCTG+GGG | - | chr3.1:82188959-82188978 | MS.gene32832:intron | 50.0% | |
| TTGCTGCTCTTGGAGAAGCT+TGG | + | chr3.1:82190085-82190104 | None:intergenic | 50.0% | |
| ! | CCGCACCTTTTCCTTGATCA+AGG | + | chr3.1:82186655-82186674 | None:intergenic | 50.0% |
| ! | GCCTTTTGCTTCTGGGTTTG+TGG | - | chr3.1:82186007-82186026 | MS.gene32832:CDS | 50.0% |
| !! | ACCTAGGTAGTGGGGTTTAG+GGG | + | chr3.1:82187758-82187777 | None:intergenic | 50.0% |
| !! | GCTGAGTTGGTGATGAGATG+AGG | - | chr3.1:82187722-82187741 | MS.gene32832:intron | 50.0% |
| !! | TCAAGTGGAGGAACTTGCTG+TGG | - | chr3.1:82189725-82189744 | MS.gene32832:CDS | 50.0% |
| ACACTGTGCAGGTAGCTGTC+GGG | - | chr3.1:82186840-82186859 | MS.gene32832:intron | 55.0% | |
| ACCCCTAAACCCCACTACCT+AGG | - | chr3.1:82187754-82187773 | MS.gene32832:intron | 55.0% | |
| AGCTATCCGAGCTCAAGTGG+AGG | - | chr3.1:82189713-82189732 | MS.gene32832:CDS | 55.0% | |
| AGTGGGGCTGTGAAAAGGGT+TGG | - | chr3.1:82186887-82186906 | MS.gene32832:intron | 55.0% | |
| ATCTTGGCAACAACGCTCGC+AGG | + | chr3.1:82189900-82189919 | None:intergenic | 55.0% | |
| ATGTCAGGAGCTTGGGACCA+AGG | - | chr3.1:82186157-82186176 | MS.gene32832:intron | 55.0% | |
| CACACTGTGCAGGTAGCTGT+CGG | - | chr3.1:82186839-82186858 | MS.gene32832:intron | 55.0% | |
| CCAGAAGAAGATGGCTGGCA+AGG | - | chr3.1:82186079-82186098 | MS.gene32832:intron | 55.0% | |
| CCTTGCCAGCCATCTTCTTC+TGG | + | chr3.1:82186082-82186101 | None:intergenic | 55.0% | |
| GGCGTATCATGTCGACCACA+AGG | + | chr3.1:82186061-82186080 | None:intergenic | 55.0% | |
| TCCGTTGTCCAATCTCCCCA+AGG | + | chr3.1:82189770-82189789 | None:intergenic | 55.0% | |
| TGAACCTCTCCCTTGGGAAG+TGG | + | chr3.1:82186965-82186984 | None:intergenic | 55.0% | |
| TGCAGTCTTTCCGGTTCCAG+GGG | + | chr3.1:82186123-82186142 | None:intergenic | 55.0% | |
| TGGGTTTGTGGGACAAGCTG+AGG | - | chr3.1:82186019-82186038 | MS.gene32832:CDS | 55.0% | |
| TGTTCCACTTCCCAAGGGAG+AGG | - | chr3.1:82186958-82186977 | MS.gene32832:intron | 55.0% | |
| ! | AAGAGAAGCGTGTGGCCTTG+TGG | - | chr3.1:82186043-82186062 | MS.gene32832:CDS | 55.0% |
| ! | GGTGTTGCAGAACTTGTCCC+TGG | - | chr3.1:82188957-82188976 | MS.gene32832:intron | 55.0% |
| !! | GGAGGAACTTGCTGTGGATG+AGG | - | chr3.1:82189731-82189750 | MS.gene32832:CDS | 55.0% |
| AGAAGATGGGGAGGCAGAGG+AGG | + | chr3.1:82187798-82187817 | None:intergenic | 60.0% | |
| AGAGCTCGGTCACCTTGCAC+AGG | + | chr3.1:82186512-82186531 | None:intergenic | 60.0% | |
| CACTGTGCAGGTAGCTGTCG+GGG | - | chr3.1:82186841-82186860 | MS.gene32832:intron | 60.0% | |
| GAGAGAAGATGGGGAGGCAG+AGG | + | chr3.1:82187801-82187820 | None:intergenic | 60.0% | |
| GCAGTCTTTCCGGTTCCAGG+GGG | + | chr3.1:82186122-82186141 | None:intergenic | 60.0% | |
| ! | GCTGAGGCAAGAGAAGCGTG+TGG | - | chr3.1:82186035-82186054 | MS.gene32832:CDS | 60.0% |
| CTGCCAACGCGCGACCTCAA+GGG | - | chr3.1:82188395-82188414 | MS.gene32832:intron | 65.0% | |
| TGCCAACGCGCGACCTCAAG+GGG | - | chr3.1:82188396-82188415 | MS.gene32832:intron | 65.0% | |
| ! | GCAAGGCACTCCTTCTCGCC+GGG | - | chr3.1:82186096-82186115 | MS.gene32832:intron | 65.0% |
| ! | GGCAAGGCACTCCTTCTCGC+CGG | - | chr3.1:82186095-82186114 | MS.gene32832:intron | 65.0% |
| CCAACGCGCGACCTCAAGGG+GGG | - | chr3.1:82188398-82188417 | MS.gene32832:intron | 70.0% | |
| CTTTCCGGTTCCAGGGGGCC+CGG | + | chr3.1:82186117-82186136 | None:intergenic | 70.0% | |
| GCCAACGCGCGACCTCAAGG+GGG | - | chr3.1:82188397-82188416 | MS.gene32832:intron | 70.0% | |
| GCTGCCAACGCGCGACCTCA+AGG | - | chr3.1:82188394-82188413 | MS.gene32832:intron | 70.0% | |
| CCCCCCTTGAGGTCGCGCGT+TGG | + | chr3.1:82188401-82188420 | None:intergenic | 75.0% | |
| TTCCAGGGGGCCCGGCGAGA+AGG | + | chr3.1:82186109-82186128 | None:intergenic | 75.0% | |
| ! | CTCCTTCTCGCCGGGCCCCC+TGG | - | chr3.1:82186104-82186123 | MS.gene32832:intron | 80.0% |
| ! | CTCGCCGGGCCCCCTGGAAC+CGG | - | chr3.1:82186110-82186129 | MS.gene32832:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 82185659 | 82190122 | 82185659 | ID=MS.gene32832 |
| chr3.1 | mRNA | 82185659 | 82190122 | 82185659 | ID=MS.gene32832.t1;Parent=MS.gene32832 |
| chr3.1 | exon | 82190033 | 82190122 | 82190033 | ID=MS.gene32832.t1.exon1;Parent=MS.gene32832.t1 |
| chr3.1 | CDS | 82190033 | 82190122 | 82190033 | ID=cds.MS.gene32832.t1;Parent=MS.gene32832.t1 |
| chr3.1 | exon | 82189603 | 82189791 | 82189603 | ID=MS.gene32832.t1.exon2;Parent=MS.gene32832.t1 |
| chr3.1 | CDS | 82189603 | 82189791 | 82189603 | ID=cds.MS.gene32832.t1;Parent=MS.gene32832.t1 |
| chr3.1 | exon | 82189397 | 82189528 | 82189397 | ID=MS.gene32832.t1.exon3;Parent=MS.gene32832.t1 |
| chr3.1 | CDS | 82189397 | 82189528 | 82189397 | ID=cds.MS.gene32832.t1;Parent=MS.gene32832.t1 |
| chr3.1 | exon | 82189113 | 82189262 | 82189113 | ID=MS.gene32832.t1.exon4;Parent=MS.gene32832.t1 |
| chr3.1 | CDS | 82189113 | 82189262 | 82189113 | ID=cds.MS.gene32832.t1;Parent=MS.gene32832.t1 |
| chr3.1 | exon | 82188775 | 82188930 | 82188775 | ID=MS.gene32832.t1.exon5;Parent=MS.gene32832.t1 |
| chr3.1 | CDS | 82188775 | 82188930 | 82188775 | ID=cds.MS.gene32832.t1;Parent=MS.gene32832.t1 |
| chr3.1 | exon | 82187277 | 82187411 | 82187277 | ID=MS.gene32832.t1.exon6;Parent=MS.gene32832.t1 |
| chr3.1 | CDS | 82187277 | 82187411 | 82187277 | ID=cds.MS.gene32832.t1;Parent=MS.gene32832.t1 |
| chr3.1 | exon | 82186783 | 82186848 | 82186783 | ID=MS.gene32832.t1.exon7;Parent=MS.gene32832.t1 |
| chr3.1 | CDS | 82186783 | 82186848 | 82186783 | ID=cds.MS.gene32832.t1;Parent=MS.gene32832.t1 |
| chr3.1 | exon | 82186592 | 82186698 | 82186592 | ID=MS.gene32832.t1.exon8;Parent=MS.gene32832.t1 |
| chr3.1 | CDS | 82186592 | 82186698 | 82186592 | ID=cds.MS.gene32832.t1;Parent=MS.gene32832.t1 |
| chr3.1 | exon | 82186170 | 82186269 | 82186170 | ID=MS.gene32832.t1.exon9;Parent=MS.gene32832.t1 |
| chr3.1 | CDS | 82186170 | 82186269 | 82186170 | ID=cds.MS.gene32832.t1;Parent=MS.gene32832.t1 |
| chr3.1 | exon | 82185982 | 82186073 | 82185982 | ID=MS.gene32832.t1.exon10;Parent=MS.gene32832.t1 |
| chr3.1 | CDS | 82185982 | 82186073 | 82185982 | ID=cds.MS.gene32832.t1;Parent=MS.gene32832.t1 |
| chr3.1 | exon | 82185837 | 82185906 | 82185837 | ID=MS.gene32832.t1.exon11;Parent=MS.gene32832.t1 |
| chr3.1 | CDS | 82185837 | 82185906 | 82185837 | ID=cds.MS.gene32832.t1;Parent=MS.gene32832.t1 |
| chr3.1 | exon | 82185659 | 82185748 | 82185659 | ID=MS.gene32832.t1.exon12;Parent=MS.gene32832.t1 |
| chr3.1 | CDS | 82185659 | 82185748 | 82185659 | ID=cds.MS.gene32832.t1;Parent=MS.gene32832.t1 |
| Gene Sequence |
| Protein sequence |
