Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048489.t1 | AAB81011.1 | 100 | 557 | 0 | 0 | 7 | 563 | 30 | 586 | 0.00E+00 | 1162.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048489.t1 | P19251 | 94.8 | 557 | 29 | 0 | 7 | 563 | 30 | 586 | 0.0e+00 | 1110.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048489.t1 | O24483 | 100.0 | 557 | 0 | 0 | 7 | 563 | 30 | 586 | 0.0e+00 | 1162.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048489 | MS.gene41176 | PPI |
| MS.gene75475 | MS.gene048489 | PPI |
| MS.gene30955 | MS.gene048489 | PPI |
| MS.gene021114 | MS.gene048489 | PPI |
| MS.gene004045 | MS.gene048489 | PPI |
| MS.gene071169 | MS.gene048489 | PPI |
| MS.gene045117 | MS.gene048489 | PPI |
| MS.gene79217 | MS.gene048489 | PPI |
| MS.gene45489 | MS.gene048489 | PPI |
| MS.gene31156 | MS.gene048489 | PPI |
| MS.gene052207 | MS.gene048489 | PPI |
| MS.gene052122 | MS.gene048489 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048489.t1 | MTR_3g464580 | 99.820 | 557 | 1 | 0 | 7 | 563 | 30 | 586 | 0.0 | 1167 |
| MS.gene048489.t1 | MTR_3g464580 | 99.792 | 480 | 1 | 0 | 7 | 486 | 30 | 509 | 0.0 | 1009 |
| MS.gene048489.t1 | MTR_5g071360 | 86.176 | 557 | 75 | 2 | 7 | 563 | 30 | 584 | 0.0 | 1007 |
| MS.gene048489.t1 | MTR_5g071360 | 87.759 | 482 | 58 | 1 | 7 | 488 | 30 | 510 | 0.0 | 898 |
| MS.gene048489.t1 | MTR_3g464580 | 98.578 | 422 | 5 | 1 | 7 | 428 | 30 | 450 | 0.0 | 872 |
| MS.gene048489.t1 | MTR_3g087220 | 75.518 | 531 | 129 | 1 | 7 | 537 | 30 | 559 | 0.0 | 870 |
| MS.gene048489.t1 | MTR_5g069310 | 76.224 | 143 | 33 | 1 | 421 | 563 | 2 | 143 | 1.57e-70 | 223 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048489.t1 | AT3G47340 | 81.720 | 558 | 98 | 3 | 7 | 563 | 30 | 584 | 0.0 | 968 |
| MS.gene048489.t1 | AT5G10240 | 79.087 | 526 | 109 | 1 | 7 | 532 | 30 | 554 | 0.0 | 898 |
| MS.gene048489.t1 | AT5G65010 | 78.544 | 522 | 111 | 1 | 7 | 528 | 30 | 550 | 0.0 | 892 |
| MS.gene048489.t1 | AT5G65010 | 78.585 | 523 | 110 | 2 | 7 | 528 | 30 | 551 | 0.0 | 889 |
| MS.gene048489.t1 | AT5G10240 | 78.517 | 526 | 111 | 2 | 7 | 532 | 30 | 553 | 0.0 | 888 |
| MS.gene048489.t1 | AT3G47340 | 84.375 | 480 | 74 | 1 | 7 | 486 | 30 | 508 | 0.0 | 873 |
| MS.gene048489.t1 | AT3G47340 | 84.062 | 389 | 61 | 1 | 7 | 395 | 30 | 417 | 0.0 | 709 |
| MS.gene048489.t1 | AT3G47340 | 84.158 | 303 | 47 | 1 | 93 | 395 | 1 | 302 | 0.0 | 550 |
Find 128 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGCGTATGTTGATTTAT+TGG | 0.205283 | 3.3:+52087913 | None:intergenic |
| CTTCTTTGTTTGGTGCCTTA+TGG | 0.206839 | 3.3:+52088100 | None:intergenic |
| TGAATTTCAGTTTACTATTC+AGG | 0.209606 | 3.3:-52088892 | MS.gene048489:intron |
| TGGATTGCATCAGAATTAAA+AGG | 0.220309 | 3.3:-52089554 | MS.gene048489:CDS |
| GGAGTCAAATGGGTGATTTC+TGG | 0.221522 | 3.3:-52088162 | MS.gene048489:CDS |
| TCTATAGTAATATGCTTCTT+TGG | 0.249070 | 3.3:+52087313 | None:intergenic |
| AGATTAGAAATTTCCATCTT+TGG | 0.261394 | 3.3:+52086773 | None:intergenic |
| CTTCTCTGGCTCTACAGTTT+TGG | 0.272062 | 3.3:+52086802 | None:intergenic |
| GCCATTGTTGATCCTGCTTC+TGG | 0.280821 | 3.3:-52090173 | MS.gene048489:CDS |
| CCAACATGGTGATAACTATT+TGG | 0.283627 | 3.3:-52090210 | MS.gene048489:CDS |
| TTACCTTGCGGCATGTTTCT+TGG | 0.286349 | 3.3:+52088070 | None:intergenic |
| CTATTGAGTGGGATGCTTCT+TGG | 0.291336 | 3.3:-52086904 | MS.gene048489:CDS |
| AAGATGGAAATTTCTAATCT+TGG | 0.303255 | 3.3:-52086770 | MS.gene048489:CDS |
| TCAAGCAACCTTGATCCTTC+TGG | 0.306690 | 3.3:-52086881 | MS.gene048489:CDS |
| TGGTTGGATTGATGGCATTA+AGG | 0.312488 | 3.3:-52087505 | MS.gene048489:CDS |
| CACTTCCTTGTACATTGGTT+GGG | 0.316283 | 3.3:-52089687 | MS.gene048489:CDS |
| GATTACAGGCTGTGATAAAA+AGG | 0.326265 | 3.3:-52089233 | MS.gene048489:intron |
| TCGGCAAGGCTAACGGTTCC+TGG | 0.326698 | 3.3:-52086959 | MS.gene048489:CDS |
| TGGTGAAACTCTTCTTTGTT+TGG | 0.329318 | 3.3:+52088090 | None:intergenic |
| TGTTGTTAGTACGAGGAGTA+TGG | 0.336456 | 3.3:-52089806 | MS.gene048489:intron |
| TGGAGGTTTGGATTCTTCAT+TGG | 0.339121 | 3.3:-52089175 | MS.gene048489:CDS |
| CCACTTCTCTTCCGGCCTTA+AGG | 0.361914 | 3.3:+52088940 | None:intergenic |
| ATCTTTGGTATAATCTTCTC+TGG | 0.371278 | 3.3:+52086788 | None:intergenic |
| TTGTTATTGTAGGTTCTGTT+TGG | 0.373539 | 3.3:-52089574 | MS.gene048489:intron |
| CATTGATCCTGAGTACAAAA+TGG | 0.374006 | 3.3:-52087834 | MS.gene048489:intron |
| CTCATTCTGTGTAGGACTTA+AGG | 0.378447 | 3.3:-52089085 | MS.gene048489:intron |
| TATCATAAAATTCAGGTGAA+TGG | 0.381079 | 3.3:-52090021 | MS.gene048489:intron |
| GTTGGCTATGGTTGGATTGA+TGG | 0.383418 | 3.3:-52087513 | MS.gene048489:CDS |
| TACATTGGTTGGGGACTAGA+TGG | 0.386232 | 3.3:-52089677 | MS.gene048489:intron |
| CACAAAAGCTGCTAAGCAAT+GGG | 0.391623 | 3.3:-52089121 | MS.gene048489:CDS |
| AAAGTCTGCCACTTCTCTTC+CGG | 0.398299 | 3.3:+52088932 | None:intergenic |
| TCACTTCCTTGTACATTGGT+TGG | 0.403117 | 3.3:-52089688 | MS.gene048489:CDS |
| CCTTCTGGAAGAGCAGCATT+TGG | 0.406608 | 3.3:-52086866 | MS.gene048489:CDS |
| TGTGTACGGAATTTGTGATT+AGG | 0.411870 | 3.3:+52089961 | None:intergenic |
| CATATGATGTAACCACAATC+AGG | 0.412177 | 3.3:-52088230 | MS.gene048489:CDS |
| TCAAATCATCAGGAGTCAAA+TGG | 0.416775 | 3.3:-52088173 | MS.gene048489:CDS |
| CTCAAAACAAGAGGATCATA+AGG | 0.417430 | 3.3:+52089407 | None:intergenic |
| TGCAGATTAAAGCTCTTCAT+AGG | 0.424217 | 3.3:-52087952 | MS.gene048489:intron |
| TTAGGGTGCACCTGACCTTA+AGG | 0.431886 | 3.3:-52088955 | MS.gene048489:intron |
| AGAGAAGATTATACCAAAGA+TGG | 0.434916 | 3.3:-52086786 | MS.gene048489:CDS |
| AGAGGATCATAAGGGGTTGT+TGG | 0.435604 | 3.3:+52089416 | None:intergenic |
| TGGTGGAGCCCACTCCAATC+TGG | 0.436866 | 3.3:+52090230 | None:intergenic |
| AGGGTATTTGTATTTCCATA+AGG | 0.443024 | 3.3:-52088115 | MS.gene048489:CDS |
| TCTCTTCCGGCCTTAAGGTC+AGG | 0.447008 | 3.3:+52088945 | None:intergenic |
| GGTGTCACTTCCTTGTACAT+TGG | 0.452637 | 3.3:-52089692 | MS.gene048489:CDS |
| AAGAAGGTAGAATTGAGAAA+TGG | 0.457528 | 3.3:-52087714 | MS.gene048489:CDS |
| TGTCTCATATTAGCTTTGAA+TGG | 0.461591 | 3.3:+52086742 | None:intergenic |
| TCAAAACAAGAGGATCATAA+GGG | 0.462003 | 3.3:+52089408 | None:intergenic |
| ACTTCCTTGTACATTGGTTG+GGG | 0.475172 | 3.3:-52089686 | MS.gene048489:CDS |
| TAATATGCTTCTTTGGTAAG+TGG | 0.476674 | 3.3:+52087320 | None:intergenic |
| TAGAGTACCTTAGGTAGGTA+AGG | 0.478173 | 3.3:+52087658 | None:intergenic |
| TCTCGAAAGATCAAATCATC+AGG | 0.483191 | 3.3:-52088183 | MS.gene048489:CDS |
| CTGTGATGTTATTGCACACC+TGG | 0.486927 | 3.3:-52089932 | MS.gene048489:intron |
| TCTACAATCATGAAGACCTT+AGG | 0.489260 | 3.3:-52089993 | MS.gene048489:CDS |
| GCACAAAAGCTGCTAAGCAA+TGG | 0.493861 | 3.3:-52089122 | MS.gene048489:CDS |
| TGAAGCACCGTGGTCCAGAT+TGG | 0.494451 | 3.3:-52090244 | MS.gene048489:intron |
| CAAATCATCAGGAGTCAAAT+GGG | 0.497991 | 3.3:-52088172 | MS.gene048489:CDS |
| GTTCAGATAAAACATGAAGA+AGG | 0.499536 | 3.3:-52087730 | MS.gene048489:intron |
| TTGGTAAGTGGAGTGTTGAA+AGG | 0.504831 | 3.3:+52087332 | None:intergenic |
| CTGCTCTTCCAGAAGGATCA+AGG | 0.507380 | 3.3:+52086873 | None:intergenic |
| ATTGTTGCGAGGGATGCTAT+AGG | 0.511574 | 3.3:-52089713 | MS.gene048489:CDS |
| AAGACCGGGAGTTTCGTAGA+TGG | 0.513657 | 3.3:-52089472 | MS.gene048489:CDS |
| GGATTGCATCAGAATTAAAA+GGG | 0.514030 | 3.3:-52089553 | MS.gene048489:CDS |
| GTGATGGAGTTGGCTATGGT+TGG | 0.516816 | 3.3:-52087521 | MS.gene048489:CDS |
| GGATGGCATAGATGCAATAG+AGG | 0.521917 | 3.3:-52088274 | MS.gene048489:CDS |
| TTCAGTGATGGAGTTGGCTA+TGG | 0.523214 | 3.3:-52087525 | MS.gene048489:CDS |
| GAATTGAGAAATGGATACTT+AGG | 0.529889 | 3.3:-52087705 | MS.gene048489:CDS |
| AGAGGTTGATCACCAGAAGC+AGG | 0.531123 | 3.3:+52090161 | None:intergenic |
| GATTAGGCAATTGTTTCCTA+AGG | 0.531169 | 3.3:+52089977 | None:intergenic |
| ATAACTATTTGGCTCATCAA+AGG | 0.533219 | 3.3:-52090199 | MS.gene048489:CDS |
| ACTTGTACTCGAGCAAAGAC+CGG | 0.535273 | 3.3:-52089487 | MS.gene048489:CDS |
| CTTGTACTCGAGCAAAGACC+GGG | 0.536345 | 3.3:-52089486 | MS.gene048489:CDS |
| CAACAGTTTCATTGTTGCGA+GGG | 0.541209 | 3.3:-52089723 | MS.gene048489:CDS |
| AGCAGTCACTGCTAGATACC+TGG | 0.543495 | 3.3:-52089148 | MS.gene048489:CDS |
| TAGTAAACTGAAATTCATGA+TGG | 0.544517 | 3.3:+52088898 | None:intergenic |
| AATAGTTATCACCATGTTGG+TGG | 0.545301 | 3.3:+52090213 | None:intergenic |
| CAATAAATCAACATACGCAT+GGG | 0.548801 | 3.3:-52087912 | MS.gene048489:CDS |
| AAATGGGTGATTTCTGGAGA+AGG | 0.550290 | 3.3:-52088156 | MS.gene048489:CDS |
| CAGAAGGAACAGTTCAGTGA+TGG | 0.554559 | 3.3:-52087537 | MS.gene048489:CDS |
| AGGTGTTGCTGCCCTGATTG+TGG | 0.554777 | 3.3:+52088218 | None:intergenic |
| CCAATAAATCAACATACGCA+TGG | 0.555802 | 3.3:-52087913 | MS.gene048489:CDS |
| GTAGAACTCGGCAAGGCTAA+CGG | 0.559214 | 3.3:-52086966 | MS.gene048489:intron |
| CCAAATGCTGCTCTTCCAGA+AGG | 0.561506 | 3.3:+52086866 | None:intergenic |
| AAATTACACTCATTCTGTGT+AGG | 0.565107 | 3.3:-52089093 | MS.gene048489:CDS |
| GGATTTCATCAAAGTTGCAA+TGG | 0.568271 | 3.3:-52087858 | MS.gene048489:CDS |
| TTTCGAGACATCAGAAACAT+AGG | 0.569570 | 3.3:+52088198 | None:intergenic |
| TGTGAATCTTACCTTCTCAA+AGG | 0.571655 | 3.3:+52089379 | None:intergenic |
| CATCACAGTCACATTGTGTA+CGG | 0.573999 | 3.3:+52089947 | None:intergenic |
| AGAGAATCCTTACCTACCTA+AGG | 0.580886 | 3.3:-52087665 | MS.gene048489:intron |
| TTTGAGGAACGCCTTTGAGA+AGG | 0.583912 | 3.3:-52089390 | MS.gene048489:intron |
| ACCGTGGTCCAGATTGGAGT+GGG | 0.584195 | 3.3:-52090238 | MS.gene048489:CDS |
| ACTATAGAATGATCTTTGAG+AGG | 0.584236 | 3.3:-52087298 | MS.gene048489:CDS |
| TCGATTTGTAGAACTCGGCA+AGG | 0.586254 | 3.3:-52086973 | MS.gene048489:intron |
| CATGCAACACTAGCTCCTCC+AGG | 0.589828 | 3.3:+52086941 | None:intergenic |
| GAACAGTTCAGTGATGGAGT+TGG | 0.592459 | 3.3:-52087531 | MS.gene048489:CDS |
| TGAGAAATGGATACTTAGGA+AGG | 0.593962 | 3.3:-52087701 | MS.gene048489:CDS |
| GGTGCACCTGACCTTAAGGC+CGG | 0.595098 | 3.3:-52088951 | MS.gene048489:CDS |
| TTGATGACTGATGTGCCGTT+CGG | 0.596910 | 3.3:-52089210 | MS.gene048489:CDS |
| CCAAATAGTTATCACCATGT+TGG | 0.601085 | 3.3:+52090210 | None:intergenic |
| TAGAGTAGAGTACCTTAGGT+AGG | 0.606905 | 3.3:+52087653 | None:intergenic |
| TAGTCCCCAACCAATGTACA+AGG | 0.608478 | 3.3:+52089682 | None:intergenic |
| CACAGAGAAAGCTATTGAGT+GGG | 0.608617 | 3.3:-52086915 | MS.gene048489:CDS |
| GCACAGAGAAAGCTATTGAG+TGG | 0.609213 | 3.3:-52086916 | MS.gene048489:CDS |
| GATTTGTCTTCATTGAAGAG+AGG | 0.610358 | 3.3:+52090143 | None:intergenic |
| AGACAAATCTATTATTGTCA+CGG | 0.614131 | 3.3:-52090129 | MS.gene048489:intron |
| TGTACCATCTACGAAACTCC+CGG | 0.614554 | 3.3:+52089468 | None:intergenic |
| CCTTAAGGCCGGAAGAGAAG+TGG | 0.615422 | 3.3:-52088940 | MS.gene048489:CDS |
| GTCACTGCTAGATACCTGGC+TGG | 0.621089 | 3.3:-52089144 | MS.gene048489:CDS |
| ATATGATGTAACCACAATCA+GGG | 0.627367 | 3.3:-52088229 | MS.gene048489:CDS |
| AAGGCGTTCCTCAAAACAAG+AGG | 0.630369 | 3.3:+52089398 | None:intergenic |
| TGGAGTGGGCTCCACCAACA+TGG | 0.631779 | 3.3:-52090224 | MS.gene048489:CDS |
| ACAACAGTTTCATTGTTGCG+AGG | 0.640177 | 3.3:-52089724 | MS.gene048489:CDS |
| CACCGTGGTCCAGATTGGAG+TGG | 0.641426 | 3.3:-52090239 | MS.gene048489:CDS |
| TTGCTCGAGTACAAGTGACC+AGG | 0.642279 | 3.3:+52089494 | None:intergenic |
| CCAGATAGTAAAACACCGAA+CGG | 0.643802 | 3.3:+52089195 | None:intergenic |
| CTCGAGTACAAGTGACCAGG+TGG | 0.647322 | 3.3:+52089497 | None:intergenic |
| GCCCACTCCAATCTGGACCA+CGG | 0.649014 | 3.3:+52090237 | None:intergenic |
| CAATCCTCCGTGGTTCAATG+AGG | 0.649428 | 3.3:-52089447 | MS.gene048489:CDS |
| TCACCAAGAAACATGCCGCA+AGG | 0.655836 | 3.3:-52088073 | MS.gene048489:intron |
| CAAAACAAGAGGATCATAAG+GGG | 0.657549 | 3.3:+52089409 | None:intergenic |
| ACCAGAAGCAGGATCAACAA+TGG | 0.667593 | 3.3:+52090172 | None:intergenic |
| ACAAAAGCTGCTAAGCAATG+GGG | 0.694915 | 3.3:-52089120 | MS.gene048489:CDS |
| GTAGATGGTACAATCCTCCG+TGG | 0.707926 | 3.3:-52089457 | MS.gene048489:CDS |
| AATAAATCAACATACGCATG+GGG | 0.713947 | 3.3:-52087911 | MS.gene048489:CDS |
| GCAAGGCTAACGGTTCCTGG+AGG | 0.715059 | 3.3:-52086956 | MS.gene048489:CDS |
| ATAACAGCCTCATTGAACCA+CGG | 0.715208 | 3.3:+52089440 | None:intergenic |
| ACAGCCTCATTGAACCACGG+AGG | 0.790372 | 3.3:+52089443 | None:intergenic |
| TGTCACAGATTGAAGCACCG+TGG | 0.798262 | 3.3:-52090254 | MS.gene048489:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATTATCCATTTATAT+TGG | - | chr3.3:52086862-52086881 | MS.gene048489:CDS | 10.0% |
| !! | TACTTATTAATTATTCTAAT+TGG | + | chr3.3:52087181-52087200 | None:intergenic | 10.0% |
| !! | TATAATTATCCATTTATATT+GGG | - | chr3.3:52086863-52086882 | MS.gene048489:CDS | 10.0% |
| !!! | ATTCTTTATTAAATATTTTG+TGG | - | chr3.3:52089208-52089227 | MS.gene048489:CDS | 10.0% |
| !!! | TAAATTTTATCATAAAATTC+AGG | - | chr3.3:52087485-52087504 | MS.gene048489:intron | 10.0% |
| !!! | TATAATTCTCTTTAAAATAT+TGG | + | chr3.3:52086828-52086847 | None:intergenic | 10.0% |
| !! | GAAAAAAAAACATTCATTTA+AGG | - | chr3.3:52088497-52088516 | MS.gene048489:intron | 15.0% |
| !! | GAATAAAAACACTTAATAAA+AGG | + | chr3.3:52089758-52089777 | None:intergenic | 15.0% |
| !! | GAATAATTAATAAGTAACTT+TGG | - | chr3.3:52087185-52087204 | MS.gene048489:intron | 15.0% |
| !! | GGATTATTAAAAAAATTCAA+TGG | - | chr3.3:52088475-52088494 | MS.gene048489:intron | 15.0% |
| !! | TACTATATAGTATAATAAAG+TGG | - | chr3.3:52087452-52087471 | MS.gene048489:intron | 15.0% |
| !!! | ATTGCTTTAATCTTTATTTA+TGG | - | chr3.3:52088527-52088546 | MS.gene048489:intron | 15.0% |
| !!! | TGGTTTTTTATTTTTTTCAA+TGG | + | chr3.3:52086804-52086823 | None:intergenic | 15.0% |
| !!! | TTTATTTTAATAAATCACGT+GGG | - | chr3.3:52087123-52087142 | MS.gene048489:intron | 15.0% |
| !!! | TTTTATTTTAATAAATCACG+TGG | - | chr3.3:52087122-52087141 | MS.gene048489:intron | 15.0% |
| !! | AAAATAAAAATTCCACATGT+AGG | + | chr3.3:52087111-52087130 | None:intergenic | 20.0% |
| !! | AAATAGCTGAAAATAGTTTA+TGG | + | chr3.3:52090353-52090372 | None:intergenic | 20.0% |
| !! | AATAAACAAAAGTAAGACAT+GGG | - | chr3.3:52087004-52087023 | MS.gene048489:intron | 20.0% |
| !! | ACAAACTATAGAATATTACT+AGG | + | chr3.3:52087421-52087440 | None:intergenic | 20.0% |
| !! | CAAACTATAGAATATTACTA+GGG | + | chr3.3:52087420-52087439 | None:intergenic | 20.0% |
| !! | GTAACATTCATGTAAATAAA+AGG | + | chr3.3:52087671-52087690 | None:intergenic | 20.0% |
| !!! | ACATTTTTTATGATACCATA+GGG | - | chr3.3:52089170-52089189 | MS.gene048489:CDS | 20.0% |
| !!! | ATTCTCTTTAAAATATTGGA+TGG | + | chr3.3:52086824-52086843 | None:intergenic | 20.0% |
| !!! | CAATTCTTACATTTTTAAGT+CGG | - | chr3.3:52088207-52088226 | MS.gene048489:CDS | 20.0% |
| !!! | GAATGAAAAATCAATTTTAG+TGG | - | chr3.3:52088454-52088473 | MS.gene048489:intron | 20.0% |
| !!! | TATTTATGGTATGTTGATTA+GGG | - | chr3.3:52088541-52088560 | MS.gene048489:intron | 20.0% |
| !!! | TGTTATTTTGATGCAATAAT+TGG | - | chr3.3:52087034-52087053 | MS.gene048489:intron | 20.0% |
| !!! | TTATTTAAAACATTATGTCG+CGG | - | chr3.3:52087626-52087645 | MS.gene048489:intron | 20.0% |
| !!! | TTATTTATGGTATGTTGATT+AGG | - | chr3.3:52088540-52088559 | MS.gene048489:intron | 20.0% |
| !!! | TTCTTGAAATTTTTTCGTAT+AGG | - | chr3.3:52090120-52090139 | MS.gene048489:intron | 20.0% |
| !!! | TTTTTTCAATGGCAAAATAT+TGG | + | chr3.3:52086793-52086812 | None:intergenic | 20.0% |
| ! | AGACAAATCTATTATTGTCA+CGG | - | chr3.3:52087384-52087403 | MS.gene048489:intron | 25.0% |
| ! | ATAAACAAAAGTAAGACATG+GGG | - | chr3.3:52087005-52087024 | MS.gene048489:intron | 25.0% |
| ! | ATTTGATTAGGCCTTTATTA+AGG | + | chr3.3:52090511-52090530 | None:intergenic | 25.0% |
| ! | GAATAAACAAAAGTAAGACA+TGG | - | chr3.3:52087003-52087022 | MS.gene048489:intron | 25.0% |
| ! | TAGACAAATACTATTTGAAG+TGG | + | chr3.3:52089046-52089065 | None:intergenic | 25.0% |
| ! | TAGTAAACTGAAATTCATGA+TGG | + | chr3.3:52088618-52088637 | None:intergenic | 25.0% |
| ! | TATCATAAAATTCAGGTGAA+TGG | - | chr3.3:52087492-52087511 | MS.gene048489:CDS | 25.0% |
| ! | TATTGCATCAAAATAACATG+TGG | + | chr3.3:52087032-52087051 | None:intergenic | 25.0% |
| ! | TCTATAGTAATATGCTTCTT+TGG | + | chr3.3:52090203-52090222 | None:intergenic | 25.0% |
| ! | TGAAACTGAAAAGAAAATGT+TGG | + | chr3.3:52090063-52090082 | None:intergenic | 25.0% |
| ! | TGAATTTCAGTTTACTATTC+AGG | - | chr3.3:52088621-52088640 | MS.gene048489:intron | 25.0% |
| ! | TTGGACTTTATGTATATGAA+CGG | + | chr3.3:52087162-52087181 | None:intergenic | 25.0% |
| ! | TTTGAAGGAAAAAAATGAAG+TGG | - | chr3.3:52089490-52089509 | MS.gene048489:CDS | 25.0% |
| !! | TATCTTTTCATTTGTTCTGT+TGG | - | chr3.3:52087757-52087776 | MS.gene048489:intron | 25.0% |
| !! | TGAATAATTTGTGACAAGTT+TGG | - | chr3.3:52087909-52087928 | MS.gene048489:CDS | 25.0% |
| !! | TTTTGATGCAATAATTGGTT+CGG | - | chr3.3:52087039-52087058 | MS.gene048489:intron | 25.0% |
| !!! | AAATTAATTTGTCCTACATG+TGG | - | chr3.3:52087096-52087115 | MS.gene048489:intron | 25.0% |
| !!! | CACATTTTTTATGATACCAT+AGG | - | chr3.3:52089169-52089188 | MS.gene048489:CDS | 25.0% |
| !!! | CATTTTTTATGATACCATAG+GGG | - | chr3.3:52089171-52089190 | MS.gene048489:CDS | 25.0% |
| !!! | TACATGAATGTTACTGATTT+TGG | - | chr3.3:52087677-52087696 | MS.gene048489:CDS | 25.0% |
| !!! | TCTTTTTCGTTGATTTTGTT+GGG | + | chr3.3:52087072-52087091 | None:intergenic | 25.0% |
| !!! | TTCATTTTACTTTTGTTGCA+AGG | - | chr3.3:52090079-52090098 | MS.gene048489:intron | 25.0% |
| AAACATACTTGACTTTGACA+AGG | - | chr3.3:52086937-52086956 | MS.gene048489:CDS | 30.0% | |
| AAACGTTTGTCAAACTGTTT+CGG | - | chr3.3:52090298-52090317 | MS.gene048489:intron | 30.0% | |
| AAATTACACTCATTCTGTGT+AGG | - | chr3.3:52088420-52088439 | MS.gene048489:intron | 30.0% | |
| AACATACTTGACTTTGACAA+GGG | - | chr3.3:52086938-52086957 | MS.gene048489:CDS | 30.0% | |
| AAGAAGGTAGAATTGAGAAA+TGG | - | chr3.3:52089799-52089818 | MS.gene048489:CDS | 30.0% | |
| AATAAATCAACATACGCATG+GGG | - | chr3.3:52089602-52089621 | MS.gene048489:intron | 30.0% | |
| ACAACTGAAAGATAAGCATT+GGG | + | chr3.3:52086890-52086909 | None:intergenic | 30.0% | |
| ACTATAGAATGATCTTTGAG+AGG | - | chr3.3:52090215-52090234 | MS.gene048489:CDS | 30.0% | |
| AGAGAAGATTATACCAAAGA+TGG | - | chr3.3:52090727-52090746 | MS.gene048489:intron | 30.0% | |
| ATAGTTTATGGACATGTCAT+AGG | + | chr3.3:52090341-52090360 | None:intergenic | 30.0% | |
| ATATGATGTAACCACAATCA+GGG | - | chr3.3:52089284-52089303 | MS.gene048489:intron | 30.0% | |
| ATCTTTGGTATAATCTTCTC+TGG | + | chr3.3:52090728-52090747 | None:intergenic | 30.0% | |
| ATGAAATCCTTGTCCAAAAA+TGG | + | chr3.3:52089644-52089663 | None:intergenic | 30.0% | |
| CAATAAATCAACATACGCAT+GGG | - | chr3.3:52089601-52089620 | MS.gene048489:intron | 30.0% | |
| CAGATAGAAATTGTAGCAAA+TGG | + | chr3.3:52089891-52089910 | None:intergenic | 30.0% | |
| CATCAAAAACATTGATGTCA+TGG | - | chr3.3:52089000-52089019 | MS.gene048489:intron | 30.0% | |
| CGATTGATTAAATTACCTGA+GGG | + | chr3.3:52090246-52090265 | None:intergenic | 30.0% | |
| CTACATAAAGATTACTAACC+AGG | + | chr3.3:52087602-52087621 | None:intergenic | 30.0% | |
| GAATTGAGAAATGGATACTT+AGG | - | chr3.3:52089808-52089827 | MS.gene048489:intron | 30.0% | |
| GGATTGCATCAGAATTAAAA+GGG | - | chr3.3:52087960-52087979 | MS.gene048489:intron | 30.0% | |
| GTTCAGATAAAACATGAAGA+AGG | - | chr3.3:52089783-52089802 | MS.gene048489:CDS | 30.0% | |
| TAATATGCTTCTTTGGTAAG+TGG | + | chr3.3:52090196-52090215 | None:intergenic | 30.0% | |
| TACAACTGAAAGATAAGCAT+TGG | + | chr3.3:52086891-52086910 | None:intergenic | 30.0% | |
| TCAAAACAAGAGGATCATAA+GGG | + | chr3.3:52088108-52088127 | None:intergenic | 30.0% | |
| TCAAAATTGCGAAAAGATGT+GGG | - | chr3.3:52088676-52088695 | MS.gene048489:intron | 30.0% | |
| TCGATTGATTAAATTACCTG+AGG | + | chr3.3:52090247-52090266 | None:intergenic | 30.0% | |
| TGGACTTTATGTATATGAAC+GGG | + | chr3.3:52087161-52087180 | None:intergenic | 30.0% | |
| TGGATTGCATCAGAATTAAA+AGG | - | chr3.3:52087959-52087978 | MS.gene048489:intron | 30.0% | |
| ! | AAATATTTTGTGGTCTATGC+AGG | - | chr3.3:52089218-52089237 | MS.gene048489:CDS | 30.0% |
| ! | AATGTAGTTCTATTACCTTG+CGG | + | chr3.3:52089458-52089477 | None:intergenic | 30.0% |
| ! | AGGGTATTTGTATTTCCATA+AGG | - | chr3.3:52089398-52089417 | MS.gene048489:CDS | 30.0% |
| ! | ATAACTATTTGGCTCATCAA+AGG | - | chr3.3:52087314-52087333 | MS.gene048489:CDS | 30.0% |
| ! | TATCATACCATTTTGTACTC+AGG | + | chr3.3:52089689-52089708 | None:intergenic | 30.0% |
| ! | TCATGCAGCACATTTTATAT+AGG | - | chr3.3:52089953-52089972 | MS.gene048489:CDS | 30.0% |
| ! | TTGATGTCATGGTCTTAATT+TGG | - | chr3.3:52089011-52089030 | MS.gene048489:intron | 30.0% |
| ! | TTGTTATTGTAGGTTCTGTT+TGG | - | chr3.3:52087939-52087958 | MS.gene048489:CDS | 30.0% |
| !!! | CTCTTTTTCGTTGATTTTGT+TGG | + | chr3.3:52087073-52087092 | None:intergenic | 30.0% |
| !!! | TCATTTTTGTTGTTAGTACG+AGG | - | chr3.3:52087700-52087719 | MS.gene048489:CDS | 30.0% |
| AAAACATTATGTCGCGGTTT+AGG | - | chr3.3:52087632-52087651 | MS.gene048489:intron | 35.0% | |
| AATAGTTATCACCATGTTGG+TGG | + | chr3.3:52087303-52087322 | None:intergenic | 35.0% | |
| ACATACTTGACTTTGACAAG+GGG | - | chr3.3:52086939-52086958 | MS.gene048489:CDS | 35.0% | |
| CAAAACAAGAGGATCATAAG+GGG | + | chr3.3:52088107-52088126 | None:intergenic | 35.0% | |
| CAAATCATCAGGAGTCAAAT+GGG | - | chr3.3:52089341-52089360 | MS.gene048489:intron | 35.0% | |
| CATAATATTGTTTGCCCCTA+TGG | + | chr3.3:52089188-52089207 | None:intergenic | 35.0% | |
| CATATGATGTAACCACAATC+AGG | - | chr3.3:52089283-52089302 | MS.gene048489:intron | 35.0% | |
| CATTGATCCTGAGTACAAAA+TGG | - | chr3.3:52089679-52089698 | MS.gene048489:CDS | 35.0% | |
| CCAAATAGTTATCACCATGT+TGG | + | chr3.3:52087306-52087325 | None:intergenic | 35.0% | |
| CCAACATGGTGATAACTATT+TGG | - | chr3.3:52087303-52087322 | MS.gene048489:CDS | 35.0% | |
| CCAATAAATCAACATACGCA+TGG | - | chr3.3:52089600-52089619 | MS.gene048489:intron | 35.0% | |
| CGAAAAGTTGCAGTCAAATA+GGG | - | chr3.3:52089076-52089095 | MS.gene048489:intron | 35.0% | |
| CGAAACACAGAGATTTGATT+AGG | + | chr3.3:52090523-52090542 | None:intergenic | 35.0% | |
| CGATTGATGTGTTTGATTAC+AGG | - | chr3.3:52088266-52088285 | MS.gene048489:CDS | 35.0% | |
| CTCAAAACAAGAGGATCATA+AGG | + | chr3.3:52088109-52088128 | None:intergenic | 35.0% | |
| CTCAAAATTGCGAAAAGATG+TGG | - | chr3.3:52088675-52088694 | MS.gene048489:intron | 35.0% | |
| CTTGTAACTACGAGTAGTTT+AGG | - | chr3.3:52086912-52086931 | MS.gene048489:CDS | 35.0% | |
| GATTACAGGCTGTGATAAAA+AGG | - | chr3.3:52088280-52088299 | MS.gene048489:intron | 35.0% | |
| GATTAGGCAATTGTTTCCTA+AGG | + | chr3.3:52087539-52087558 | None:intergenic | 35.0% | |
| GATTTGTCTTCATTGAAGAG+AGG | + | chr3.3:52087373-52087392 | None:intergenic | 35.0% | |
| GCCTTTATTAAGGTTCTGTT+CGG | + | chr3.3:52090501-52090520 | None:intergenic | 35.0% | |
| GGATTTCATCAAAGTTGCAA+TGG | - | chr3.3:52089655-52089674 | MS.gene048489:intron | 35.0% | |
| TCAAATCATCAGGAGTCAAA+TGG | - | chr3.3:52089340-52089359 | MS.gene048489:intron | 35.0% | |
| TCCGAACAGAACCTTAATAA+AGG | - | chr3.3:52090497-52090516 | MS.gene048489:intron | 35.0% | |
| TCTACAATCATGAAGACCTT+AGG | - | chr3.3:52087520-52087539 | MS.gene048489:CDS | 35.0% | |
| TCTCGAAAGATCAAATCATC+AGG | - | chr3.3:52089330-52089349 | MS.gene048489:intron | 35.0% | |
| TGAGAAATGGATACTTAGGA+AGG | - | chr3.3:52089812-52089831 | MS.gene048489:intron | 35.0% | |
| TGCAGATTAAAGCTCTTCAT+AGG | - | chr3.3:52089561-52089580 | MS.gene048489:CDS | 35.0% | |
| TGGTGAAACTCTTCTTTGTT+TGG | + | chr3.3:52089426-52089445 | None:intergenic | 35.0% | |
| TGTGAATCTTACCTTCTCAA+AGG | + | chr3.3:52088137-52088156 | None:intergenic | 35.0% | |
| TGTGTACGGAATTTGTGATT+AGG | + | chr3.3:52087555-52087574 | None:intergenic | 35.0% | |
| TTTCGAGACATCAGAAACAT+AGG | + | chr3.3:52089318-52089337 | None:intergenic | 35.0% | |
| ! | AAAGTAGAGTAGAGTACCTT+AGG | + | chr3.3:52089867-52089886 | None:intergenic | 35.0% |
| ! | AGAAAATTTTGTGGACATGC+TGG | - | chr3.3:52087730-52087749 | MS.gene048489:intron | 35.0% |
| ! | CAACTGAAAGATAAGCATTG+GGG | + | chr3.3:52086889-52086908 | None:intergenic | 35.0% |
| ! | GAAGGATCTGATGAGATTTT+TGG | - | chr3.3:52089375-52089394 | MS.gene048489:intron | 35.0% |
| ! | GCACATTTTATATAGGCAGA+AGG | - | chr3.3:52089960-52089979 | MS.gene048489:CDS | 35.0% |
| ! | GGAGTATGGAGAAAATTTTG+TGG | - | chr3.3:52087721-52087740 | MS.gene048489:CDS | 35.0% |
| ! | GTGTTTCGATTTGTAGAACT+CGG | - | chr3.3:52090535-52090554 | MS.gene048489:intron | 35.0% |
| ! | TGTTTACATGTTTTGCAGCA+TGG | + | chr3.3:52090035-52090054 | None:intergenic | 35.0% |
| ! | TGTTTTACTATCTGGAGGTT+TGG | - | chr3.3:52088326-52088345 | MS.gene048489:intron | 35.0% |
| !! | AGAAGCTAGAGTACCATTTT+TGG | - | chr3.3:52089628-52089647 | MS.gene048489:intron | 35.0% |
| !! | CCATGCGTATGTTGATTTAT+TGG | + | chr3.3:52089603-52089622 | None:intergenic | 35.0% |
| !! | GATCTGATGAGATTTTTGGA+GGG | - | chr3.3:52089379-52089398 | MS.gene048489:intron | 35.0% |
| !! | TAGAGTACCATTTTTGGACA+AGG | - | chr3.3:52089634-52089653 | MS.gene048489:intron | 35.0% |
| !!! | CATTTTGAAGTTTTTCCACC+TGG | - | chr3.3:52088001-52088020 | MS.gene048489:intron | 35.0% |
| !!! | CTTATGATCCTCTTGTTTTG+AGG | - | chr3.3:52088107-52088126 | MS.gene048489:CDS | 35.0% |
| !!! | TGGCACGTTTTTGTTATTGT+AGG | - | chr3.3:52087929-52087948 | MS.gene048489:CDS | 35.0% |
| AAACACGTTGACCAGAGATA+CGG | - | chr3.3:52088156-52088175 | MS.gene048489:CDS | 40.0% | |
| ACAAAAGCTGCTAAGCAATG+GGG | - | chr3.3:52088393-52088412 | MS.gene048489:intron | 40.0% | |
| ACAACAGTTTCATTGTTGCG+AGG | - | chr3.3:52087789-52087808 | MS.gene048489:intron | 40.0% | |
| ACGTTTATGTCATTGTCGCT+TGG | + | chr3.3:52090284-52090303 | None:intergenic | 40.0% | |
| AGAAGTCACAGTCTAGATTG+TGG | - | chr3.3:52089143-52089162 | MS.gene048489:CDS | 40.0% | |
| AGAGAATCCTTACCTACCTA+AGG | - | chr3.3:52089848-52089867 | MS.gene048489:intron | 40.0% | |
| ATAACAGCCTCATTGAACCA+CGG | + | chr3.3:52088076-52088095 | None:intergenic | 40.0% | |
| ATTACATCGCTCGTGTTTGA+AGG | - | chr3.3:52089475-52089494 | MS.gene048489:CDS | 40.0% | |
| CAAATTCTGATGTGACACCA+AGG | + | chr3.3:52088882-52088901 | None:intergenic | 40.0% | |
| CAACAGTTTCATTGTTGCGA+GGG | - | chr3.3:52087790-52087809 | MS.gene048489:intron | 40.0% | |
| CACAAAAGCTGCTAAGCAAT+GGG | - | chr3.3:52088392-52088411 | MS.gene048489:intron | 40.0% | |
| CACAGAGAAAGCTATTGAGT+GGG | - | chr3.3:52090598-52090617 | MS.gene048489:intron | 40.0% | |
| CATCACAGTCACATTGTGTA+CGG | + | chr3.3:52087569-52087588 | None:intergenic | 40.0% | |
| CATGCAGACATCAAAAACCT+TGG | - | chr3.3:52088862-52088881 | MS.gene048489:intron | 40.0% | |
| CCAGATAGTAAAACACCGAA+CGG | + | chr3.3:52088321-52088340 | None:intergenic | 40.0% | |
| CGAAAAGATGTGGGCAAATA+GGG | - | chr3.3:52088685-52088704 | MS.gene048489:intron | 40.0% | |
| CTCAAAATTGCGAAGAGTTG+CGG | - | chr3.3:52088935-52088954 | MS.gene048489:CDS | 40.0% | |
| CTCATTCTGTGTAGGACTTA+AGG | - | chr3.3:52088428-52088447 | MS.gene048489:intron | 40.0% | |
| GCGAAAAGTTGCAGTCAAAT+AGG | - | chr3.3:52089075-52089094 | MS.gene048489:intron | 40.0% | |
| TCACTTCCTTGTACATTGGT+TGG | - | chr3.3:52087825-52087844 | MS.gene048489:intron | 40.0% | |
| TGGAGGTTTGGATTCTTCAT+TGG | - | chr3.3:52088338-52088357 | MS.gene048489:intron | 40.0% | |
| TGTTGTTAGTACGAGGAGTA+TGG | - | chr3.3:52087707-52087726 | MS.gene048489:CDS | 40.0% | |
| TTATGTCGCAGTCTTTACTG+TGG | - | chr3.3:52088751-52088770 | MS.gene048489:intron | 40.0% | |
| ! | AAATGGGTGATTTCTGGAGA+AGG | - | chr3.3:52089357-52089376 | MS.gene048489:intron | 40.0% |
| ! | AATTTTGTGGACATGCTGGA+TGG | - | chr3.3:52087734-52087753 | MS.gene048489:intron | 40.0% |
| ! | ACTTCCTTGTACATTGGTTG+GGG | - | chr3.3:52087827-52087846 | MS.gene048489:intron | 40.0% |
| ! | AGAGAAGTGGCAGACTTTTT+AGG | - | chr3.3:52088586-52088605 | MS.gene048489:intron | 40.0% |
| ! | ATTTTGTGGTCTATGCAGGA+TGG | - | chr3.3:52089222-52089241 | MS.gene048489:CDS | 40.0% |
| ! | CAAAGTCGCATCAGTGTTTT+AGG | + | chr3.3:52088962-52088981 | None:intergenic | 40.0% |
| ! | CACTTCCTTGTACATTGGTT+GGG | - | chr3.3:52087826-52087845 | MS.gene048489:intron | 40.0% |
| ! | TAGAGTACCTTAGGTAGGTA+AGG | + | chr3.3:52089858-52089877 | None:intergenic | 40.0% |
| ! | TAGAGTAGAGTACCTTAGGT+AGG | + | chr3.3:52089863-52089882 | None:intergenic | 40.0% |
| ! | TGGTTGGATTGATGGCATTA+AGG | - | chr3.3:52090008-52090027 | MS.gene048489:CDS | 40.0% |
| !! | CTTCTTTGTTTGGTGCCTTA+TGG | + | chr3.3:52089416-52089435 | None:intergenic | 40.0% |
| !! | GGATCTGATGAGATTTTTGG+AGG | - | chr3.3:52089378-52089397 | MS.gene048489:intron | 40.0% |
| !! | TTGGTAAGTGGAGTGTTGAA+AGG | + | chr3.3:52090184-52090203 | None:intergenic | 40.0% |
| !! | TTTTGGCAACTGAGTTGACT+TGG | + | chr3.3:52090697-52090716 | None:intergenic | 40.0% |
| !!! | TTCGGTGTTTTACTATCTGG+AGG | - | chr3.3:52088321-52088340 | MS.gene048489:intron | 40.0% |
| ACCAGAAGCAGGATCAACAA+TGG | + | chr3.3:52087344-52087363 | None:intergenic | 45.0% | |
| ACTTGTACTCGAGCAAAGAC+CGG | - | chr3.3:52088026-52088045 | MS.gene048489:intron | 45.0% | |
| AGAGGATCATAAGGGGTTGT+TGG | + | chr3.3:52088100-52088119 | None:intergenic | 45.0% | |
| ATTGTTGCGAGGGATGCTAT+AGG | - | chr3.3:52087800-52087819 | MS.gene048489:intron | 45.0% | |
| CAGAAGGAACAGTTCAGTGA+TGG | - | chr3.3:52089976-52089995 | MS.gene048489:CDS | 45.0% | |
| CTATTGAGTGGGATGCTTCT+TGG | - | chr3.3:52090609-52090628 | MS.gene048489:intron | 45.0% | |
| CTGTGATGTTATTGCACACC+TGG | - | chr3.3:52087581-52087600 | MS.gene048489:intron | 45.0% | |
| GCACAAAAGCTGCTAAGCAA+TGG | - | chr3.3:52088391-52088410 | MS.gene048489:intron | 45.0% | |
| GCACAGAGAAAGCTATTGAG+TGG | - | chr3.3:52090597-52090616 | MS.gene048489:intron | 45.0% | |
| GCATTGGGGCCCAATATAAA+TGG | + | chr3.3:52086875-52086894 | None:intergenic | 45.0% | |
| GCGAAAAGATGTGGGCAAAT+AGG | - | chr3.3:52088684-52088703 | MS.gene048489:intron | 45.0% | |
| GGAGTCAAATGGGTGATTTC+TGG | - | chr3.3:52089351-52089370 | MS.gene048489:intron | 45.0% | |
| GGATGGCATAGATGCAATAG+AGG | - | chr3.3:52089239-52089258 | MS.gene048489:intron | 45.0% | |
| GTTGGCTATGGTTGGATTGA+TGG | - | chr3.3:52090000-52090019 | MS.gene048489:CDS | 45.0% | |
| TAGTCCCCAACCAATGTACA+AGG | + | chr3.3:52087834-52087853 | None:intergenic | 45.0% | |
| TCAAGCAACCTTGATCCTTC+TGG | - | chr3.3:52090632-52090651 | MS.gene048489:intron | 45.0% | |
| TGTACCATCTACGAAACTCC+CGG | + | chr3.3:52088048-52088067 | None:intergenic | 45.0% | |
| TTACCTTGCGGCATGTTTCT+TGG | + | chr3.3:52089446-52089465 | None:intergenic | 45.0% | |
| ! | AAAGTCTGCCACTTCTCTTC+CGG | + | chr3.3:52088584-52088603 | None:intergenic | 45.0% |
| ! | AAGGCGTTCCTCAAAACAAG+AGG | + | chr3.3:52088118-52088137 | None:intergenic | 45.0% |
| ! | CTCTTTTCAGACCGTATCTC+TGG | + | chr3.3:52088170-52088189 | None:intergenic | 45.0% |
| ! | GAACAGTTCAGTGATGGAGT+TGG | - | chr3.3:52089982-52090001 | MS.gene048489:CDS | 45.0% |
| ! | GCTATTTCCTTAAGCTCTCC+AGG | - | chr3.3:52090366-52090385 | MS.gene048489:intron | 45.0% |
| ! | TACATTGGTTGGGGACTAGA+TGG | - | chr3.3:52087836-52087855 | MS.gene048489:CDS | 45.0% |
| ! | TCGATTTGTAGAACTCGGCA+AGG | - | chr3.3:52090540-52090559 | MS.gene048489:intron | 45.0% |
| ! | TTCAGTGATGGAGTTGGCTA+TGG | - | chr3.3:52089988-52090007 | MS.gene048489:CDS | 45.0% |
| ! | TTGATGACTGATGTGCCGTT+CGG | - | chr3.3:52088303-52088322 | MS.gene048489:intron | 45.0% |
| ! | TTTGAGGAACGCCTTTGAGA+AGG | - | chr3.3:52088123-52088142 | MS.gene048489:CDS | 45.0% |
| !! | CTTTGAGAGGTTTTTCCCTC+AGG | - | chr3.3:52090228-52090247 | MS.gene048489:CDS | 45.0% |
| !! | GCTGTTTTCATGAGCTATCC+TGG | + | chr3.3:52090387-52090406 | None:intergenic | 45.0% |
| !! | GGTGTCACTTCCTTGTACAT+TGG | - | chr3.3:52087821-52087840 | MS.gene048489:intron | 45.0% |
| !! | TTATGTCGCGGTTTAGGTTG+CGG | - | chr3.3:52087638-52087657 | MS.gene048489:intron | 45.0% |
| !!! | CCGTTCGGTGTTTTACTATC+TGG | - | chr3.3:52088318-52088337 | MS.gene048489:intron | 45.0% |
| !!! | CTTCTCTGGCTCTACAGTTT+TGG | + | chr3.3:52090714-52090733 | None:intergenic | 45.0% |
| AAGACCGGGAGTTTCGTAGA+TGG | - | chr3.3:52088041-52088060 | MS.gene048489:intron | 50.0% | |
| AGCAGTCACTGCTAGATACC+TGG | - | chr3.3:52088365-52088384 | MS.gene048489:intron | 50.0% | |
| CAATCCTCCGTGGTTCAATG+AGG | - | chr3.3:52088066-52088085 | MS.gene048489:intron | 50.0% | |
| CCAAATGCTGCTCTTCCAGA+AGG | + | chr3.3:52090650-52090669 | None:intergenic | 50.0% | |
| CTGCTCTTCCAGAAGGATCA+AGG | + | chr3.3:52090643-52090662 | None:intergenic | 50.0% | |
| CTTGTACTCGAGCAAAGACC+GGG | - | chr3.3:52088027-52088046 | MS.gene048489:intron | 50.0% | |
| GAGCTATCCTGGAGAGCTTA+AGG | + | chr3.3:52090376-52090395 | None:intergenic | 50.0% | |
| GCCATTGTTGATCCTGCTTC+TGG | - | chr3.3:52087340-52087359 | MS.gene048489:CDS | 50.0% | |
| GTAGAACTCGGCAAGGCTAA+CGG | - | chr3.3:52090547-52090566 | MS.gene048489:intron | 50.0% | |
| GTAGATGGTACAATCCTCCG+TGG | - | chr3.3:52088056-52088075 | MS.gene048489:intron | 50.0% | |
| TCACCAAGAAACATGCCGCA+AGG | - | chr3.3:52089440-52089459 | MS.gene048489:CDS | 50.0% | |
| TTAGGGTGCACCTGACCTTA+AGG | - | chr3.3:52088558-52088577 | MS.gene048489:intron | 50.0% | |
| TTGCTCGAGTACAAGTGACC+AGG | + | chr3.3:52088022-52088041 | None:intergenic | 50.0% | |
| ! | AGAGGTTGATCACCAGAAGC+AGG | + | chr3.3:52087355-52087374 | None:intergenic | 50.0% |
| ! | CCTTCTGGAAGAGCAGCATT+TGG | - | chr3.3:52090647-52090666 | MS.gene048489:intron | 50.0% |
| ! | GTGATGGAGTTGGCTATGGT+TGG | - | chr3.3:52089992-52090011 | MS.gene048489:CDS | 50.0% |
| !! | TGTCACAGATTGAAGCACCG+TGG | - | chr3.3:52087259-52087278 | MS.gene048489:intron | 50.0% |
| ACAGCCTCATTGAACCACGG+AGG | + | chr3.3:52088073-52088092 | None:intergenic | 55.0% | |
| ACCGTGGTCCAGATTGGAGT+GGG | - | chr3.3:52087275-52087294 | MS.gene048489:intron | 55.0% | |
| CATGCAACACTAGCTCCTCC+AGG | + | chr3.3:52090575-52090594 | None:intergenic | 55.0% | |
| CCACTTCTCTTCCGGCCTTA+AGG | + | chr3.3:52088576-52088595 | None:intergenic | 55.0% | |
| CCTTAAGGCCGGAAGAGAAG+TGG | - | chr3.3:52088573-52088592 | MS.gene048489:intron | 55.0% | |
| CTCGAGTACAAGTGACCAGG+TGG | + | chr3.3:52088019-52088038 | None:intergenic | 55.0% | |
| GTCACTGCTAGATACCTGGC+TGG | - | chr3.3:52088369-52088388 | MS.gene048489:intron | 55.0% | |
| TCTCTTCCGGCCTTAAGGTC+AGG | + | chr3.3:52088571-52088590 | None:intergenic | 55.0% | |
| ! | TAGCAGCTTTTGTGCCAGCC+AGG | + | chr3.3:52088386-52088405 | None:intergenic | 55.0% |
| !! | AGGTGTTGCTGCCCTGATTG+TGG | + | chr3.3:52089298-52089317 | None:intergenic | 55.0% |
| !! | TGAAGCACCGTGGTCCAGAT+TGG | - | chr3.3:52087269-52087288 | MS.gene048489:intron | 55.0% |
| CACCGTGGTCCAGATTGGAG+TGG | - | chr3.3:52087274-52087293 | MS.gene048489:intron | 60.0% | |
| GCAAGGCTAACGGTTCCTGG+AGG | - | chr3.3:52090557-52090576 | MS.gene048489:intron | 60.0% | |
| GCCCACTCCAATCTGGACCA+CGG | + | chr3.3:52087279-52087298 | None:intergenic | 60.0% | |
| GGTGCACCTGACCTTAAGGC+CGG | - | chr3.3:52088562-52088581 | MS.gene048489:intron | 60.0% | |
| TCGGCAAGGCTAACGGTTCC+TGG | - | chr3.3:52090554-52090573 | MS.gene048489:intron | 60.0% | |
| TGGTGGAGCCCACTCCAATC+TGG | + | chr3.3:52087286-52087305 | None:intergenic | 60.0% | |
| ! | TGGAGTGGGCTCCACCAACA+TGG | - | chr3.3:52087289-52087308 | MS.gene048489:CDS | 60.0% |
| !! | CGCGGTTTAGGTTGCGGTCG+CGG | - | chr3.3:52087644-52087663 | MS.gene048489:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 52086751 | 52090784 | 52086751 | ID=MS.gene048489 |
| chr3.3 | mRNA | 52086751 | 52090784 | 52086751 | ID=MS.gene048489.t1;Parent=MS.gene048489 |
| chr3.3 | exon | 52090767 | 52090784 | 52090767 | ID=MS.gene048489.t1.exon1;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52090767 | 52090784 | 52090767 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| chr3.3 | exon | 52090130 | 52090261 | 52090130 | ID=MS.gene048489.t1.exon2;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52090130 | 52090261 | 52090130 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| chr3.3 | exon | 52089933 | 52090028 | 52089933 | ID=MS.gene048489.t1.exon3;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52089933 | 52090028 | 52089933 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| chr3.3 | exon | 52089678 | 52089819 | 52089678 | ID=MS.gene048489.t1.exon4;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52089678 | 52089819 | 52089678 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| chr3.3 | exon | 52089391 | 52089584 | 52089391 | ID=MS.gene048489.t1.exon5;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52089391 | 52089584 | 52089391 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| chr3.3 | exon | 52089086 | 52089247 | 52089086 | ID=MS.gene048489.t1.exon6;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52089086 | 52089247 | 52089086 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| chr3.3 | exon | 52088893 | 52088973 | 52088893 | ID=MS.gene048489.t1.exon7;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52088893 | 52088973 | 52088893 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| chr3.3 | exon | 52088074 | 52088295 | 52088074 | ID=MS.gene048489.t1.exon8;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52088074 | 52088295 | 52088074 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| chr3.3 | exon | 52087835 | 52087969 | 52087835 | ID=MS.gene048489.t1.exon9;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52087835 | 52087969 | 52087835 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| chr3.3 | exon | 52087666 | 52087746 | 52087666 | ID=MS.gene048489.t1.exon10;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52087666 | 52087746 | 52087666 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| chr3.3 | exon | 52087488 | 52087574 | 52087488 | ID=MS.gene048489.t1.exon11;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52087488 | 52087574 | 52087488 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| chr3.3 | exon | 52087286 | 52087393 | 52087286 | ID=MS.gene048489.t1.exon12;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52087286 | 52087393 | 52087286 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| chr3.3 | exon | 52086751 | 52086984 | 52086751 | ID=MS.gene048489.t1.exon13;Parent=MS.gene048489.t1 |
| chr3.3 | CDS | 52086751 | 52086984 | 52086751 | ID=cds.MS.gene048489.t1;Parent=MS.gene048489.t1 |
| Gene Sequence |
| Protein sequence |
