Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78383.t1 | XP_003597438.1 | 97.8 | 361 | 8 | 0 | 1 | 361 | 2 | 362 | 2.90E-195 | 691 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78383.t1 | P25083 | 74.7 | 388 | 69 | 4 | 1 | 361 | 1 | 386 | 3.5e-157 | 555.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78383.t1 | G7IUC4 | 97.8 | 361 | 8 | 0 | 1 | 361 | 2 | 362 | 2.1e-195 | 691.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049457 | MS.gene78383 | 0.80693 | 6.48E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene78383 | 0.806612 | 7.56E-50 | -1.69E-46 |
| MS.gene050961 | MS.gene78383 | 0.8238 | 1.14E-53 | -1.69E-46 |
| MS.gene051959 | MS.gene78383 | 0.845376 | 4.22E-59 | -1.69E-46 |
| MS.gene051960 | MS.gene78383 | 0.842259 | 2.88E-58 | -1.69E-46 |
| MS.gene052053 | MS.gene78383 | 0.963689 | 2.15E-122 | -1.69E-46 |
| MS.gene052091 | MS.gene78383 | 0.815467 | 9.11E-52 | -1.69E-46 |
| MS.gene053602 | MS.gene78383 | 0.810702 | 1.01E-50 | -1.69E-46 |
| MS.gene053932 | MS.gene78383 | 0.836827 | 7.45E-57 | -1.69E-46 |
| MS.gene055150 | MS.gene78383 | 0.825046 | 5.80E-54 | -1.69E-46 |
| MS.gene055549 | MS.gene78383 | 0.854512 | 1.17E-61 | -1.69E-46 |
| MS.gene055550 | MS.gene78383 | 0.858572 | 7.51E-63 | -1.69E-46 |
| MS.gene055551 | MS.gene78383 | 0.829516 | 4.93E-55 | -1.69E-46 |
| MS.gene056365 | MS.gene78383 | 0.81618 | 6.32E-52 | -1.69E-46 |
| MS.gene056530 | MS.gene78383 | 0.867286 | 1.53E-65 | -1.69E-46 |
| MS.gene057001 | MS.gene78383 | 0.832137 | 1.12E-55 | -1.69E-46 |
| MS.gene057226 | MS.gene78383 | 0.809797 | 1.58E-50 | -1.69E-46 |
| MS.gene057472 | MS.gene78383 | 0.816318 | 5.88E-52 | -1.69E-46 |
| MS.gene058628 | MS.gene78383 | 0.860819 | 1.58E-63 | -1.69E-46 |
| MS.gene058629 | MS.gene78383 | 0.833945 | 3.98E-56 | -1.69E-46 |
| MS.gene058630 | MS.gene78383 | 0.844367 | 7.90E-59 | -1.69E-46 |
| MS.gene05884 | MS.gene78383 | 0.830977 | 2.17E-55 | -1.69E-46 |
| MS.gene059436 | MS.gene78383 | 0.805409 | 1.35E-49 | -1.69E-46 |
| MS.gene060237 | MS.gene78383 | 0.83438 | 3.10E-56 | -1.69E-46 |
| MS.gene06023 | MS.gene78383 | 0.830237 | 3.29E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78383.t1 | MTR_2g098070 | 97.784 | 361 | 8 | 0 | 1 | 361 | 2 | 362 | 0.0 | 717 |
| MS.gene78383.t1 | MTR_3g028590 | 73.389 | 357 | 92 | 2 | 6 | 361 | 39 | 393 | 0.0 | 519 |
| MS.gene78383.t1 | MTR_3g028590 | 73.389 | 357 | 92 | 2 | 6 | 361 | 35 | 389 | 0.0 | 518 |
| MS.gene78383.t1 | MTR_4g078545 | 72.118 | 373 | 88 | 3 | 1 | 360 | 1 | 370 | 0.0 | 514 |
| MS.gene78383.t1 | MTR_8g036880 | 73.481 | 362 | 87 | 3 | 7 | 361 | 40 | 399 | 1.10e-179 | 504 |
| MS.gene78383.t1 | MTR_8g107270 | 58.947 | 285 | 117 | 0 | 64 | 348 | 17 | 301 | 1.55e-126 | 366 |
| MS.gene78383.t1 | MTR_3g104500 | 40.260 | 308 | 172 | 7 | 54 | 354 | 23 | 325 | 4.67e-71 | 225 |
| MS.gene78383.t1 | MTR_5g009500 | 31.013 | 316 | 165 | 11 | 53 | 335 | 26 | 321 | 3.81e-35 | 132 |
| MS.gene78383.t1 | MTR_5g009500 | 24.876 | 201 | 134 | 4 | 68 | 257 | 144 | 338 | 1.38e-11 | 65.5 |
| MS.gene78383.t1 | MTR_3g104600 | 30.573 | 314 | 180 | 10 | 61 | 351 | 31 | 329 | 5.32e-35 | 131 |
| MS.gene78383.t1 | MTR_6g091800 | 28.094 | 299 | 194 | 6 | 61 | 348 | 15 | 303 | 4.59e-34 | 128 |
| MS.gene78383.t1 | MTR_8g027975 | 31.847 | 314 | 157 | 12 | 58 | 335 | 44 | 336 | 3.13e-33 | 127 |
| MS.gene78383.t1 | MTR_1g012030 | 29.643 | 280 | 173 | 8 | 65 | 340 | 139 | 398 | 1.56e-30 | 120 |
| MS.gene78383.t1 | MTR_1g012030 | 27.962 | 211 | 127 | 5 | 53 | 258 | 221 | 411 | 1.74e-16 | 80.5 |
| MS.gene78383.t1 | MTR_3g107510 | 28.814 | 295 | 175 | 10 | 68 | 352 | 125 | 394 | 5.49e-30 | 119 |
| MS.gene78383.t1 | MTR_3g107510 | 26.941 | 219 | 141 | 4 | 42 | 258 | 193 | 394 | 1.90e-17 | 83.2 |
| MS.gene78383.t1 | MTR_3g107510 | 29.189 | 185 | 111 | 5 | 170 | 348 | 122 | 292 | 2.08e-13 | 71.2 |
| MS.gene78383.t1 | MTR_6g091800 | 26.316 | 323 | 193 | 7 | 61 | 348 | 15 | 327 | 9.68e-30 | 117 |
| MS.gene78383.t1 | MTR_7g064980 | 29.097 | 299 | 195 | 8 | 63 | 351 | 23 | 314 | 1.63e-29 | 116 |
| MS.gene78383.t1 | MTR_6g091800 | 29.796 | 245 | 155 | 4 | 61 | 298 | 15 | 249 | 4.70e-29 | 113 |
| MS.gene78383.t1 | MTR_6g091800 | 28.685 | 251 | 162 | 4 | 61 | 304 | 15 | 255 | 5.24e-29 | 113 |
| MS.gene78383.t1 | MTR_6g091800 | 26.710 | 307 | 181 | 6 | 61 | 333 | 15 | 311 | 2.62e-28 | 112 |
| MS.gene78383.t1 | MTR_4g114320 | 25.839 | 298 | 186 | 8 | 65 | 352 | 123 | 395 | 1.35e-26 | 109 |
| MS.gene78383.t1 | MTR_4g114320 | 27.488 | 211 | 131 | 4 | 51 | 258 | 204 | 395 | 6.34e-17 | 81.6 |
| MS.gene78383.t1 | MTR_7g068340 | 31.047 | 277 | 160 | 8 | 76 | 345 | 98 | 350 | 1.83e-26 | 108 |
| MS.gene78383.t1 | MTR_5g081150 | 27.097 | 310 | 206 | 8 | 51 | 351 | 23 | 321 | 6.71e-26 | 106 |
| MS.gene78383.t1 | MTR_6g091800 | 27.509 | 269 | 154 | 5 | 61 | 298 | 15 | 273 | 8.44e-25 | 102 |
| MS.gene78383.t1 | MTR_6g091800 | 26.545 | 275 | 161 | 5 | 61 | 304 | 15 | 279 | 8.47e-25 | 102 |
| MS.gene78383.t1 | MTR_6g034145 | 28.049 | 246 | 163 | 5 | 114 | 348 | 7 | 249 | 2.38e-24 | 100 |
| MS.gene78383.t1 | MTR_8g096050 | 27.500 | 280 | 183 | 7 | 65 | 340 | 227 | 490 | 1.36e-23 | 102 |
| MS.gene78383.t1 | MTR_4g016730 | 30.612 | 294 | 170 | 10 | 65 | 351 | 89 | 355 | 2.07e-23 | 100 |
| MS.gene78383.t1 | MTR_2g436930 | 28.013 | 307 | 186 | 9 | 68 | 345 | 18 | 318 | 2.22e-23 | 99.4 |
| MS.gene78383.t1 | MTR_6g092210 | 27.500 | 240 | 166 | 5 | 114 | 348 | 7 | 243 | 5.87e-23 | 96.7 |
| MS.gene78383.t1 | MTR_7g084400 | 28.421 | 285 | 171 | 8 | 65 | 340 | 213 | 473 | 1.94e-22 | 98.6 |
| MS.gene78383.t1 | MTR_3g098460 | 27.576 | 330 | 205 | 13 | 21 | 340 | 163 | 468 | 2.16e-22 | 98.6 |
| MS.gene78383.t1 | MTR_4g119770 | 26.074 | 326 | 202 | 9 | 53 | 347 | 4 | 321 | 1.04e-21 | 94.7 |
| MS.gene78383.t1 | MTR_6g091800 | 29.834 | 181 | 111 | 3 | 61 | 234 | 15 | 186 | 2.18e-20 | 88.2 |
| MS.gene78383.t1 | MTR_4g005330 | 25.085 | 295 | 185 | 7 | 64 | 340 | 65 | 341 | 8.43e-20 | 89.7 |
| MS.gene78383.t1 | MTR_7g066690 | 24.164 | 269 | 195 | 5 | 60 | 326 | 12 | 273 | 4.26e-19 | 87.0 |
| MS.gene78383.t1 | MTR_4g005330 | 25.086 | 291 | 182 | 7 | 68 | 340 | 3 | 275 | 1.00e-18 | 85.9 |
| MS.gene78383.t1 | MTR_3g100570 | 26.481 | 287 | 178 | 9 | 65 | 326 | 6 | 284 | 1.57e-18 | 85.5 |
| MS.gene78383.t1 | MTR_3g100570 | 27.347 | 245 | 144 | 9 | 6 | 232 | 57 | 285 | 1.14e-11 | 65.5 |
| MS.gene78383.t1 | MTR_4g119770 | 26.820 | 261 | 163 | 7 | 53 | 293 | 4 | 256 | 1.84e-18 | 84.3 |
| MS.gene78383.t1 | MTR_3g074490 | 27.365 | 296 | 169 | 11 | 68 | 340 | 119 | 391 | 8.47e-18 | 84.3 |
| MS.gene78383.t1 | MTR_4g018750 | 25.166 | 302 | 204 | 9 | 56 | 352 | 6 | 290 | 1.73e-17 | 82.4 |
| MS.gene78383.t1 | MTR_1g090330 | 22.015 | 268 | 197 | 4 | 63 | 326 | 12 | 271 | 4.80e-17 | 81.3 |
| MS.gene78383.t1 | MTR_1g090330 | 29.762 | 168 | 110 | 4 | 66 | 232 | 112 | 272 | 1.93e-14 | 73.6 |
| MS.gene78383.t1 | MTR_6g091800 | 26.829 | 205 | 110 | 4 | 61 | 234 | 15 | 210 | 3.06e-16 | 77.0 |
| MS.gene78383.t1 | MTR_6g091910 | 24.757 | 206 | 138 | 4 | 61 | 259 | 15 | 210 | 4.32e-16 | 76.6 |
| MS.gene78383.t1 | MTR_6g091910 | 26.425 | 193 | 132 | 5 | 165 | 348 | 14 | 205 | 7.49e-13 | 67.4 |
| MS.gene78383.t1 | MTR_4g057850 | 25.592 | 211 | 136 | 5 | 66 | 270 | 116 | 311 | 1.39e-15 | 77.0 |
| MS.gene78383.t1 | MTR_2g436930 | 31.795 | 195 | 106 | 6 | 172 | 345 | 40 | 228 | 4.25e-15 | 74.3 |
| MS.gene78383.t1 | MTR_2g102010 | 23.776 | 286 | 201 | 6 | 64 | 345 | 16 | 288 | 4.50e-15 | 75.1 |
| MS.gene78383.t1 | MTR_4g012850 | 25.833 | 240 | 162 | 6 | 114 | 345 | 55 | 286 | 7.70e-15 | 74.7 |
| MS.gene78383.t1 | MTR_4g012850 | 25.114 | 219 | 153 | 4 | 33 | 251 | 79 | 286 | 8.00e-13 | 68.9 |
| MS.gene78383.t1 | MTR_5g081150 | 29.032 | 155 | 101 | 3 | 51 | 201 | 23 | 172 | 1.26e-14 | 73.2 |
| MS.gene78383.t1 | MTR_5g081150 | 29.032 | 155 | 101 | 3 | 51 | 201 | 23 | 172 | 1.74e-14 | 73.2 |
| MS.gene78383.t1 | MTR_5g030530 | 24.832 | 298 | 198 | 9 | 62 | 345 | 5 | 290 | 3.79e-14 | 72.4 |
| MS.gene78383.t1 | MTR_8g090210 | 24.662 | 296 | 177 | 10 | 68 | 340 | 113 | 385 | 8.03e-14 | 72.4 |
| MS.gene78383.t1 | MTR_1g088995 | 25.806 | 279 | 181 | 9 | 52 | 326 | 25 | 281 | 9.08e-14 | 71.6 |
| MS.gene78383.t1 | MTR_5g032420 | 21.993 | 291 | 195 | 6 | 65 | 326 | 6 | 293 | 1.00e-13 | 71.6 |
| MS.gene78383.t1 | MTR_8g066975 | 24.915 | 293 | 204 | 7 | 62 | 345 | 5 | 290 | 1.25e-13 | 70.9 |
| MS.gene78383.t1 | MTR_7g084400 | 28.061 | 196 | 115 | 5 | 65 | 254 | 207 | 382 | 1.90e-13 | 71.6 |
| MS.gene78383.t1 | MTR_3g462140 | 23.611 | 288 | 204 | 6 | 52 | 333 | 2 | 279 | 2.44e-13 | 70.1 |
| MS.gene78383.t1 | MTR_3g462140 | 27.861 | 201 | 127 | 5 | 166 | 352 | 11 | 207 | 2.08e-11 | 64.3 |
| MS.gene78383.t1 | MTR_4g018750 | 29.268 | 205 | 118 | 8 | 166 | 352 | 11 | 206 | 6.06e-12 | 65.9 |
| MS.gene78383.t1 | MTR_8g068890 | 32.558 | 129 | 80 | 3 | 105 | 232 | 165 | 287 | 6.48e-12 | 66.2 |
| MS.gene78383.t1 | MTR_8g068890 | 21.959 | 296 | 196 | 8 | 65 | 333 | 6 | 293 | 8.71e-11 | 62.8 |
| MS.gene78383.t1 | MTR_7g015870 | 28.185 | 259 | 148 | 11 | 116 | 350 | 69 | 313 | 1.41e-11 | 65.1 |
| MS.gene78383.t1 | MTR_7g015870 | 28.125 | 256 | 146 | 11 | 116 | 347 | 65 | 306 | 4.94e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78383.t1 | AT5G13490 | 71.279 | 383 | 85 | 3 | 4 | 361 | 3 | 385 | 0.0 | 527 |
| MS.gene78383.t1 | AT5G13490 | 71.279 | 383 | 85 | 3 | 4 | 361 | 3 | 385 | 0.0 | 527 |
| MS.gene78383.t1 | AT3G08580 | 72.032 | 379 | 79 | 5 | 7 | 361 | 6 | 381 | 0.0 | 517 |
| MS.gene78383.t1 | AT3G08580 | 72.032 | 379 | 79 | 5 | 7 | 361 | 6 | 381 | 0.0 | 517 |
| MS.gene78383.t1 | AT4G28390 | 77.101 | 345 | 71 | 2 | 16 | 360 | 42 | 378 | 0.0 | 516 |
| MS.gene78383.t1 | AT4G28390 | 77.101 | 345 | 71 | 2 | 16 | 360 | 42 | 378 | 0.0 | 516 |
| MS.gene78383.t1 | AT5G17400 | 62.500 | 288 | 108 | 0 | 61 | 348 | 10 | 297 | 1.10e-131 | 379 |
| MS.gene78383.t1 | AT5G56450 | 38.710 | 310 | 171 | 7 | 51 | 348 | 20 | 322 | 4.26e-67 | 215 |
| MS.gene78383.t1 | AT3G55640 | 28.618 | 304 | 200 | 7 | 55 | 349 | 28 | 323 | 1.41e-35 | 132 |
| MS.gene78383.t1 | AT3G55640 | 28.618 | 304 | 200 | 7 | 55 | 349 | 28 | 323 | 1.41e-35 | 132 |
| MS.gene78383.t1 | AT2G37890 | 29.630 | 297 | 192 | 7 | 64 | 351 | 44 | 332 | 8.69e-34 | 128 |
| MS.gene78383.t1 | AT3G53940 | 31.544 | 298 | 183 | 9 | 65 | 351 | 73 | 360 | 3.67e-33 | 127 |
| MS.gene78383.t1 | AT1G14560 | 28.470 | 281 | 175 | 6 | 76 | 340 | 38 | 308 | 1.57e-31 | 122 |
| MS.gene78383.t1 | AT4G26180 | 30.693 | 303 | 184 | 10 | 61 | 349 | 17 | 307 | 5.15e-31 | 120 |
| MS.gene78383.t1 | AT1G14560 | 28.727 | 275 | 170 | 6 | 76 | 334 | 38 | 302 | 6.81e-31 | 119 |
| MS.gene78383.t1 | AT4G01100 | 30.255 | 314 | 162 | 11 | 58 | 335 | 35 | 327 | 1.33e-30 | 119 |
| MS.gene78383.t1 | AT4G01100 | 24.878 | 205 | 131 | 6 | 68 | 257 | 148 | 344 | 1.25e-11 | 65.5 |
| MS.gene78383.t1 | AT5G01500 | 32.616 | 279 | 165 | 9 | 76 | 351 | 130 | 388 | 2.19e-30 | 120 |
| MS.gene78383.t1 | AT4G26180 | 31.359 | 287 | 172 | 9 | 61 | 334 | 17 | 291 | 4.03e-30 | 117 |
| MS.gene78383.t1 | AT3G51870 | 32.155 | 283 | 161 | 11 | 76 | 351 | 102 | 360 | 9.27e-29 | 115 |
| MS.gene78383.t1 | AT4G01100 | 29.467 | 319 | 172 | 11 | 58 | 335 | 35 | 341 | 1.19e-28 | 114 |
| MS.gene78383.t1 | AT4G01100 | 24.878 | 205 | 131 | 6 | 68 | 257 | 162 | 358 | 1.51e-11 | 65.5 |
| MS.gene78383.t1 | AT4G32400 | 30.605 | 281 | 169 | 10 | 65 | 340 | 114 | 373 | 2.10e-28 | 114 |
| MS.gene78383.t1 | AT4G32400 | 28.571 | 196 | 120 | 5 | 66 | 258 | 208 | 386 | 1.02e-13 | 72.0 |
| MS.gene78383.t1 | AT4G32400 | 28.962 | 183 | 114 | 5 | 170 | 348 | 114 | 284 | 3.04e-12 | 67.8 |
| MS.gene78383.t1 | AT4G01100 | 29.373 | 303 | 157 | 11 | 74 | 340 | 1 | 282 | 4.07e-27 | 109 |
| MS.gene78383.t1 | AT4G01100 | 24.878 | 205 | 131 | 6 | 68 | 257 | 98 | 294 | 9.79e-12 | 65.5 |
| MS.gene78383.t1 | AT3G21390 | 28.065 | 310 | 184 | 8 | 68 | 345 | 22 | 324 | 1.84e-24 | 102 |
| MS.gene78383.t1 | AT3G20240 | 24.916 | 297 | 187 | 7 | 62 | 340 | 49 | 327 | 2.68e-24 | 102 |
| MS.gene78383.t1 | AT3G21390 | 28.065 | 310 | 184 | 8 | 68 | 345 | 44 | 346 | 3.06e-24 | 102 |
| MS.gene78383.t1 | AT5G48970 | 27.097 | 310 | 188 | 8 | 68 | 345 | 25 | 328 | 8.74e-24 | 100 |
| MS.gene78383.t1 | AT1G14560 | 30.500 | 200 | 121 | 5 | 169 | 351 | 24 | 222 | 4.87e-23 | 96.7 |
| MS.gene78383.t1 | AT5G51050 | 28.485 | 330 | 199 | 12 | 21 | 340 | 181 | 483 | 1.73e-22 | 99.0 |
| MS.gene78383.t1 | AT3G55640 | 26.786 | 224 | 151 | 4 | 55 | 273 | 28 | 243 | 6.25e-22 | 94.0 |
| MS.gene78383.t1 | AT3G55640 | 26.786 | 224 | 151 | 4 | 55 | 273 | 28 | 243 | 6.25e-22 | 94.0 |
| MS.gene78383.t1 | AT3G53940 | 31.401 | 207 | 126 | 5 | 65 | 265 | 73 | 269 | 1.91e-20 | 90.5 |
| MS.gene78383.t1 | AT5G61810 | 26.335 | 281 | 177 | 8 | 65 | 340 | 65 | 320 | 2.47e-20 | 90.9 |
| MS.gene78383.t1 | AT5G61810 | 26.335 | 281 | 177 | 8 | 65 | 340 | 208 | 463 | 8.16e-20 | 90.9 |
| MS.gene78383.t1 | AT5G48970 | 28.295 | 258 | 146 | 8 | 117 | 345 | 10 | 257 | 1.94e-19 | 87.4 |
| MS.gene78383.t1 | AT3G54110 | 24.759 | 311 | 204 | 9 | 56 | 356 | 6 | 296 | 3.54e-19 | 87.4 |
| MS.gene78383.t1 | AT5G07320 | 25.926 | 270 | 174 | 7 | 74 | 340 | 218 | 464 | 4.78e-19 | 88.6 |
| MS.gene78383.t1 | AT5G58970 | 23.656 | 279 | 198 | 6 | 60 | 333 | 11 | 279 | 2.60e-17 | 82.0 |
| MS.gene78383.t1 | AT5G58970 | 29.949 | 197 | 119 | 6 | 166 | 348 | 12 | 203 | 1.11e-13 | 71.2 |
| MS.gene78383.t1 | AT5G64970 | 26.689 | 296 | 171 | 11 | 68 | 340 | 138 | 410 | 6.26e-16 | 79.0 |
| MS.gene78383.t1 | AT1G79900 | 28.870 | 239 | 147 | 7 | 114 | 345 | 55 | 277 | 2.35e-15 | 76.3 |
| MS.gene78383.t1 | AT5G64970 | 26.351 | 296 | 172 | 11 | 68 | 340 | 14 | 286 | 3.78e-15 | 75.5 |
| MS.gene78383.t1 | AT5G64970 | 26.644 | 289 | 166 | 10 | 68 | 333 | 138 | 403 | 3.93e-15 | 76.6 |
| MS.gene78383.t1 | AT1G14140 | 23.704 | 270 | 199 | 4 | 59 | 326 | 10 | 274 | 4.01e-15 | 75.5 |
| MS.gene78383.t1 | AT1G14140 | 28.283 | 198 | 124 | 6 | 170 | 355 | 18 | 209 | 8.45e-13 | 68.9 |
| MS.gene78383.t1 | AT5G09470 | 27.727 | 220 | 143 | 6 | 113 | 326 | 97 | 306 | 4.69e-15 | 75.9 |
| MS.gene78383.t1 | AT1G78180 | 25.333 | 300 | 170 | 8 | 68 | 340 | 131 | 403 | 2.77e-14 | 73.9 |
| MS.gene78383.t1 | AT5G58970 | 29.949 | 197 | 119 | 6 | 166 | 348 | 12 | 203 | 1.01e-13 | 70.9 |
| MS.gene78383.t1 | AT4G27940 | 23.438 | 256 | 178 | 6 | 105 | 344 | 146 | 399 | 1.09e-13 | 72.4 |
| MS.gene78383.t1 | AT5G66380 | 29.146 | 199 | 119 | 5 | 169 | 355 | 9 | 197 | 1.24e-13 | 71.2 |
| MS.gene78383.t1 | AT4G03115 | 23.592 | 284 | 171 | 9 | 58 | 326 | 31 | 283 | 5.50e-13 | 69.3 |
| MS.gene78383.t1 | AT4G03115 | 23.592 | 284 | 171 | 9 | 58 | 326 | 63 | 315 | 6.31e-13 | 69.3 |
| MS.gene78383.t1 | AT5G46800 | 25.753 | 299 | 193 | 9 | 64 | 345 | 7 | 293 | 2.32e-12 | 67.4 |
| MS.gene78383.t1 | AT5G46800 | 25.753 | 299 | 193 | 9 | 64 | 345 | 7 | 293 | 2.32e-12 | 67.4 |
| MS.gene78383.t1 | AT5G46800 | 25.753 | 299 | 193 | 9 | 64 | 345 | 7 | 293 | 2.32e-12 | 67.4 |
| MS.gene78383.t1 | AT2G22500 | 25.000 | 288 | 179 | 8 | 65 | 326 | 6 | 282 | 3.31e-12 | 67.0 |
| MS.gene78383.t1 | AT2G33820 | 28.723 | 188 | 118 | 6 | 161 | 340 | 13 | 192 | 6.70e-12 | 65.9 |
| MS.gene78383.t1 | AT1G25380 | 22.845 | 232 | 160 | 7 | 116 | 338 | 71 | 292 | 1.13e-11 | 65.9 |
| MS.gene78383.t1 | AT1G25380 | 28.977 | 176 | 113 | 4 | 183 | 351 | 34 | 204 | 1.82e-11 | 65.1 |
| MS.gene78383.t1 | AT1G25380 | 22.845 | 232 | 160 | 7 | 116 | 338 | 71 | 292 | 1.13e-11 | 65.9 |
| MS.gene78383.t1 | AT1G25380 | 28.977 | 176 | 113 | 4 | 183 | 351 | 34 | 204 | 1.82e-11 | 65.1 |
| MS.gene78383.t1 | AT2G33820 | 21.382 | 304 | 222 | 7 | 61 | 355 | 14 | 309 | 2.27e-11 | 64.7 |
| MS.gene78383.t1 | AT1G34065 | 22.876 | 306 | 181 | 10 | 38 | 332 | 47 | 308 | 8.97e-11 | 62.8 |
| MS.gene78383.t1 | AT1G34065 | 22.876 | 306 | 181 | 10 | 38 | 332 | 54 | 315 | 9.20e-11 | 62.8 |
Find 71 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACCTTTGAAGAGAGATTT+TGG | 0.201047 | 2.3:-5198261 | None:intergenic |
| GTGTACCGTGGTTTGTATTT+TGG | 0.236923 | 2.3:+5197254 | MS.gene78383:CDS |
| GCTCTTGGTAGGAACGTTTC+AGG | 0.238857 | 2.3:+5197301 | MS.gene78383:CDS |
| CTTATGTTGGGAAAGAAATA+TGG | 0.285268 | 2.3:+5198351 | MS.gene78383:CDS |
| TCCACCTTTCTTCGTGGACT+TGG | 0.300851 | 2.3:-5197126 | None:intergenic |
| AAGGGTATTGGAGATTGTTT+TGG | 0.320804 | 2.3:+5196733 | MS.gene78383:CDS |
| CCTCTCTCCACCTTTCTTCG+TGG | 0.345988 | 2.3:-5197132 | None:intergenic |
| AGCAAGAGAGAGATGGATAT+TGG | 0.356655 | 2.3:+5197000 | MS.gene78383:CDS |
| GGCTTCAATGTTTCAGTTGT+TGG | 0.362007 | 2.3:+5197224 | MS.gene78383:CDS |
| TGTAAAGTACAAGAGTTCTT+TGG | 0.375179 | 2.3:+5198206 | MS.gene78383:CDS |
| AAATCAAGATGAGATGATTA+AGG | 0.376906 | 2.3:+5196687 | MS.gene78383:CDS |
| ATGAAGGATTTACTTCGCTT+TGG | 0.383588 | 2.3:+5196770 | MS.gene78383:CDS |
| AGAAGCTTCACGCGCTCAAT+AGG | 0.386608 | 2.3:-5196658 | None:intergenic |
| TTTGTGCTACTGTTGGGTAT+TGG | 0.390598 | 2.3:-5196435 | None:intergenic |
| AACTGTTTCTGAAACAGAAC+AGG | 0.406642 | 2.3:-5196520 | None:intergenic |
| CTTCGAGCAGTTGCTGGTGC+TGG | 0.406961 | 2.3:+5198297 | MS.gene78383:CDS |
| TTCCGTCTTTGTTTACTCGT+TGG | 0.409566 | 2.3:+5197073 | MS.gene78383:CDS |
| TTGCAATCAGATGGTATTGC+TGG | 0.410642 | 2.3:+5197191 | MS.gene78383:CDS |
| AACATTCTTCGAGCAGTTGC+TGG | 0.413671 | 2.3:+5198291 | MS.gene78383:CDS |
| TGCAAGCTATGATAAACTTC+AGG | 0.423170 | 2.3:+5198326 | MS.gene78383:CDS |
| GGAAGAACAGTTAAAGATGA+AGG | 0.423659 | 2.3:+5196754 | MS.gene78383:CDS |
| CCACATATTGCAAATTCCTA+TGG | 0.426920 | 2.3:+5196484 | MS.gene78383:CDS |
| AAACTTCAGGTGCTTATGTT+GGG | 0.430704 | 2.3:+5198339 | MS.gene78383:CDS |
| TAGCTAGCTTTGCCCTAGGA+TGG | 0.434987 | 2.3:+5198103 | MS.gene78383:CDS |
| CCAACAGTAGCACAAAAGTT+TGG | 0.442652 | 2.3:+5196442 | MS.gene78383:CDS |
| GGATATTGGAAAGTCTTTGC+AGG | 0.443053 | 2.3:+5197014 | MS.gene78383:CDS |
| TTCTCTTAAGCCAGTGCTCT+TGG | 0.444590 | 2.3:+5197286 | MS.gene78383:CDS |
| CAACTGTAACAGCCCATCCT+AGG | 0.444717 | 2.3:-5198116 | None:intergenic |
| TCTGAGCCTTACAAGGGTAT+TGG | 0.448802 | 2.3:+5196721 | MS.gene78383:CDS |
| ATTGCATCTGGTGCTGCAGC+AGG | 0.453223 | 2.3:+5197041 | MS.gene78383:CDS |
| TTGGGAAAGAAATATGGTTC+TGG | 0.461893 | 2.3:+5198357 | MS.gene78383:CDS |
| TGGAACAAACACTGCATTTG+AGG | 0.462013 | 2.3:-5196548 | None:intergenic |
| TTTGCAGGAAATATTGCATC+TGG | 0.462558 | 2.3:+5197029 | MS.gene78383:CDS |
| TGGACTTGGCGTCGCTTGCA+AGG | 0.475415 | 2.3:-5197112 | None:intergenic |
| CAATCTCCAATACCCTTGTA+AGG | 0.475979 | 2.3:-5196727 | None:intergenic |
| AGCTAGCTTTGCCCTAGGAT+GGG | 0.478146 | 2.3:+5198104 | MS.gene78383:CDS |
| AAATCTCTCTTCAAAGGTGC+TGG | 0.485223 | 2.3:+5198264 | MS.gene78383:CDS |
| TAAACTTCAGGTGCTTATGT+TGG | 0.486307 | 2.3:+5198338 | MS.gene78383:CDS |
| CCATAGGAATTTGCAATATG+TGG | 0.487479 | 2.3:-5196484 | None:intergenic |
| CATTGATGATGGCTGATAAG+AGG | 0.495678 | 2.3:+5196410 | None:intergenic |
| GACGCCAAGTCCACGAAGAA+AGG | 0.496546 | 2.3:+5197122 | MS.gene78383:CDS |
| TTCCTAGCTAGCTTTGCCCT+AGG | 0.508251 | 2.3:+5198099 | MS.gene78383:CDS |
| TAGGCTCTCTGAGCCTTACA+AGG | 0.509331 | 2.3:+5196714 | MS.gene78383:CDS |
| AGAAGAATGATGATGACATC+AGG | 0.514497 | 2.3:+5198177 | MS.gene78383:CDS |
| ATTTGAAAGGAAACCTGTGT+TGG | 0.521968 | 2.3:-5196826 | None:intergenic |
| TCACAAATTGTGAAAACTGA+AGG | 0.528718 | 2.3:+5198237 | MS.gene78383:CDS |
| CTTCTACGAACAGTGTCTAA+AGG | 0.537254 | 2.3:-5198159 | None:intergenic |
| ATCCTAGGGCAAAGCTAGCT+AGG | 0.537911 | 2.3:-5198101 | None:intergenic |
| CTTAAGCCAGTGCTCTTGGT+AGG | 0.545019 | 2.3:+5197290 | MS.gene78383:CDS |
| GGTCCAAAATCTCTCTTCAA+AGG | 0.557932 | 2.3:+5198258 | MS.gene78383:CDS |
| CAAGATGAGATGATTAAGGC+TGG | 0.558576 | 2.3:+5196691 | MS.gene78383:CDS |
| GGTGGAGAGAGGCAATTCAA+TGG | 0.564939 | 2.3:+5197143 | MS.gene78383:CDS |
| AACTTCAAGCAAGAGAGAGA+TGG | 0.570273 | 2.3:+5196993 | MS.gene78383:CDS |
| CTAGGATGGGCTGTTACAGT+TGG | 0.574759 | 2.3:+5198117 | MS.gene78383:CDS |
| CATATTGCAAATTCCTATGG+AGG | 0.577721 | 2.3:+5196487 | MS.gene78383:CDS |
| GGAAAGAAATATGGTTCTGG+TGG | 0.583008 | 2.3:+5198360 | MS.gene78383:CDS |
| AAACCTGTGTTGGAAAGTAA+CGG | 0.584984 | 2.3:-5196816 | None:intergenic |
| ATGAGATGATTAAGGCTGGT+AGG | 0.586726 | 2.3:+5196695 | MS.gene78383:CDS |
| AAGAAGACATTGCAATCAGA+TGG | 0.590470 | 2.3:+5197182 | MS.gene78383:CDS |
| AACTGTAACAGCCCATCCTA+GGG | 0.595417 | 2.3:-5198115 | None:intergenic |
| GGATTTACTTCGCTTTGGAG+AGG | 0.595722 | 2.3:+5196775 | MS.gene78383:CDS |
| AAAGTAACGGATAACATTGA+CGG | 0.603182 | 2.3:-5196803 | None:intergenic |
| GCCAAGTCCACGAAGAAAGG+TGG | 0.603618 | 2.3:+5197125 | MS.gene78383:CDS |
| GGTATTGCTGGTCTTTATCG+CGG | 0.608830 | 2.3:+5197203 | MS.gene78383:CDS |
| AACGTTCCTACCAAGAGCAC+TGG | 0.609300 | 2.3:-5197296 | None:intergenic |
| ATCCAACGAGTAAACAAAGA+CGG | 0.620833 | 2.3:-5197075 | None:intergenic |
| TATCCGTTACTTTCCAACAC+AGG | 0.620843 | 2.3:+5196813 | MS.gene78383:CDS |
| CCACGAAGAAAGGTGGAGAG+AGG | 0.629455 | 2.3:+5197132 | MS.gene78383:CDS |
| ACAGTCCAAAATACAAACCA+CGG | 0.665396 | 2.3:-5197259 | None:intergenic |
| GTTGGAATCATTGTGTACCG+TGG | 0.672437 | 2.3:+5197242 | MS.gene78383:CDS |
| AGGCTCTCTGAGCCTTACAA+GGG | 0.675743 | 2.3:+5196715 | MS.gene78383:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTAAAATATTGGTA+GGG | + | chr2.3:5197855-5197874 | MS.gene78383:intron | 10.0% |
| !!! | ATATTATTTTACAAAATATC+AGG | + | chr2.3:5198071-5198090 | MS.gene78383:intron | 10.0% |
| !! | TATATTAAAAAGTAGAAAAC+CGG | + | chr2.3:5197732-5197751 | MS.gene78383:intron | 15.0% |
| !!! | AATTTTTAAAATATTGGTAG+GGG | + | chr2.3:5197856-5197875 | MS.gene78383:intron | 15.0% |
| !!! | CAAATTTTTAAAATATTGGT+AGG | + | chr2.3:5197854-5197873 | MS.gene78383:intron | 15.0% |
| !!! | TCGTCAAATTTTTAAAATAT+TGG | + | chr2.3:5197850-5197869 | MS.gene78383:intron | 15.0% |
| !! | AAAGAGAAAAAAGTTAGTTA+AGG | + | chr2.3:5197495-5197514 | MS.gene78383:intron | 20.0% |
| !! | AATTTGACGAAACAAAAATT+TGG | - | chr2.3:5197840-5197859 | None:intergenic | 20.0% |
| !! | TAACATGATTAATCTATTAC+AGG | + | chr2.3:5196929-5196948 | MS.gene78383:intron | 20.0% |
| !!! | ACTGCATTAATTATTTCTTT+AGG | + | chr2.3:5196854-5196873 | MS.gene78383:intron | 20.0% |
| ! | AAATCAAGATGAGATGATTA+AGG | + | chr2.3:5196687-5196706 | MS.gene78383:CDS | 25.0% |
| ! | AATCAGAATGTGTTACAATT+AGG | + | chr2.3:5197792-5197811 | MS.gene78383:intron | 25.0% |
| ! | AATGCAGTTGAAAATTTGAA+AGG | - | chr2.3:5196842-5196861 | None:intergenic | 25.0% |
| ! | AGATTAATCATGTTAGACAT+TGG | - | chr2.3:5196924-5196943 | None:intergenic | 25.0% |
| ! | CGAAAATGTAATTTAGACAT+TGG | - | chr2.3:5196880-5196899 | None:intergenic | 25.0% |
| !!! | CGATGTTTTAAAATCCAAAT+CGG | + | chr2.3:5197618-5197637 | MS.gene78383:intron | 25.0% |
| !!! | TATTTTAGAGCAGCAAATTT+TGG | - | chr2.3:5198054-5198073 | None:intergenic | 25.0% |
| ACTGTAGTTGAACTATGATT+AGG | - | chr2.3:5197664-5197683 | None:intergenic | 30.0% | |
| AGATTGTCTTACTATGGATT+TGG | + | chr2.3:5197389-5197408 | MS.gene78383:intron | 30.0% | |
| ATATTCACTCATAAGTGAGT+AGG | + | chr2.3:5197592-5197611 | MS.gene78383:intron | 30.0% | |
| CCATAGTAAGACAATCTTTA+AGG | - | chr2.3:5197386-5197405 | None:intergenic | 30.0% | |
| CCTCTTCTATTTATCCTTTA+AGG | - | chr2.3:5197464-5197483 | None:intergenic | 30.0% | |
| CCTTAAAGATTGTCTTACTA+TGG | + | chr2.3:5197383-5197402 | MS.gene78383:intron | 30.0% | |
| CCTTAAAGGATAAATAGAAG+AGG | + | chr2.3:5197461-5197480 | MS.gene78383:intron | 30.0% | |
| CTTATGTTGGGAAAGAAATA+TGG | + | chr2.3:5198351-5198370 | MS.gene78383:CDS | 30.0% | |
| TAACCTTATGAATTGCATAG+CGG | + | chr2.3:5197919-5197938 | MS.gene78383:intron | 30.0% | |
| TATTCACTCATAAGTGAGTA+GGG | + | chr2.3:5197593-5197612 | MS.gene78383:intron | 30.0% | |
| TCACAAATTGTGAAAACTGA+AGG | + | chr2.3:5198237-5198256 | MS.gene78383:CDS | 30.0% | |
| TGTAAAGTACAAGAGTTCTT+TGG | + | chr2.3:5198206-5198225 | MS.gene78383:CDS | 30.0% | |
| ! | AATTGTGTCAACATTTTCGA+CGG | - | chr2.3:5197967-5197986 | None:intergenic | 30.0% |
| ! | GATGAAGATTTTGAACATGA+CGG | + | chr2.3:5197517-5197536 | MS.gene78383:intron | 30.0% |
| !! | AAAGTAACGGATAACATTGA+CGG | - | chr2.3:5196806-5196825 | None:intergenic | 30.0% |
| AAACCTGTGTTGGAAAGTAA+CGG | - | chr2.3:5196819-5196838 | None:intergenic | 35.0% | |
| AAACTTCAGGTGCTTATGTT+GGG | + | chr2.3:5198339-5198358 | MS.gene78383:CDS | 35.0% | |
| AAGAAGACATTGCAATCAGA+TGG | + | chr2.3:5197182-5197201 | MS.gene78383:CDS | 35.0% | |
| ACAGTCCAAAATACAAACCA+CGG | - | chr2.3:5197262-5197281 | None:intergenic | 35.0% | |
| ACCAATACGCAGAAAAAATG+TGG | + | chr2.3:5197428-5197447 | MS.gene78383:intron | 35.0% | |
| ATCCAACGAGTAAACAAAGA+CGG | - | chr2.3:5197078-5197097 | None:intergenic | 35.0% | |
| ATGAAGGATTTACTTCGCTT+TGG | + | chr2.3:5196770-5196789 | MS.gene78383:CDS | 35.0% | |
| ATTCACTCATAAGTGAGTAG+GGG | + | chr2.3:5197594-5197613 | MS.gene78383:intron | 35.0% | |
| ATTTGAAAGGAAACCTGTGT+TGG | - | chr2.3:5196829-5196848 | None:intergenic | 35.0% | |
| CACTAGTTCAATTTCCGATT+TGG | - | chr2.3:5197635-5197654 | None:intergenic | 35.0% | |
| CATATTGCAAATTCCTATGG+AGG | + | chr2.3:5196487-5196506 | MS.gene78383:CDS | 35.0% | |
| CCAATACGCAGAAAAAATGT+GGG | + | chr2.3:5197429-5197448 | MS.gene78383:intron | 35.0% | |
| CCACATATTGCAAATTCCTA+TGG | + | chr2.3:5196484-5196503 | MS.gene78383:CDS | 35.0% | |
| CCATAGGAATTTGCAATATG+TGG | - | chr2.3:5196487-5196506 | None:intergenic | 35.0% | |
| GGAAGAACAGTTAAAGATGA+AGG | + | chr2.3:5196754-5196773 | MS.gene78383:CDS | 35.0% | |
| GTAACACATTCTGATTGAAC+CGG | - | chr2.3:5197788-5197807 | None:intergenic | 35.0% | |
| GTAGTTGAACTATGATTAGG+AGG | - | chr2.3:5197661-5197680 | None:intergenic | 35.0% | |
| GTCGAAAATGTTGACACAAT+TGG | + | chr2.3:5197966-5197985 | MS.gene78383:intron | 35.0% | |
| TAAACTTCAGGTGCTTATGT+TGG | + | chr2.3:5198338-5198357 | MS.gene78383:CDS | 35.0% | |
| TGCAAGCTATGATAAACTTC+AGG | + | chr2.3:5198326-5198345 | MS.gene78383:CDS | 35.0% | |
| TGTTGACACAATTGGAGTAT+TGG | + | chr2.3:5197974-5197993 | MS.gene78383:intron | 35.0% | |
| TTGGGAAAGAAATATGGTTC+TGG | + | chr2.3:5198357-5198376 | MS.gene78383:CDS | 35.0% | |
| TTTCCGCTATGCAATTCATA+AGG | - | chr2.3:5197925-5197944 | None:intergenic | 35.0% | |
| TTTGCAGGAAATATTGCATC+TGG | + | chr2.3:5197029-5197048 | MS.gene78383:CDS | 35.0% | |
| ! | AAGTTTTTCTCTGATGGAGA+TGG | - | chr2.3:5196571-5196590 | None:intergenic | 35.0% |
| ! | AGAAGAATGATGATGACATC+AGG | + | chr2.3:5198177-5198196 | MS.gene78383:CDS | 35.0% |
| ! | CGCTTTGTTGTGTGTTAATT+AGG | + | chr2.3:5196898-5196917 | MS.gene78383:intron | 35.0% |
| ! | CTTGCAAAGTTTTTCTCTGA+TGG | - | chr2.3:5196577-5196596 | None:intergenic | 35.0% |
| !! | AACTGTTTCTGAAACAGAAC+AGG | - | chr2.3:5196523-5196542 | None:intergenic | 35.0% |
| !! | CAAACTTTTGTGCTACTGTT+GGG | - | chr2.3:5196444-5196463 | None:intergenic | 35.0% |
| !! | TGAAGTCTTGTTTGTTCAAC+CGG | - | chr2.3:5197754-5197773 | None:intergenic | 35.0% |
| !! | TTTGCGACTGATTTTCTCAT+GGG | + | chr2.3:5196598-5196617 | MS.gene78383:CDS | 35.0% |
| !!! | AAGGGTATTGGAGATTGTTT+TGG | + | chr2.3:5196733-5196752 | MS.gene78383:CDS | 35.0% |
| AACTTCAAGCAAGAGAGAGA+TGG | + | chr2.3:5196993-5197012 | MS.gene78383:CDS | 40.0% | |
| AATTTGGACAGATCGCTGTT+TGG | - | chr2.3:5197824-5197843 | None:intergenic | 40.0% | |
| AGACTTCAACCAGTTCAATC+CGG | + | chr2.3:5197766-5197785 | MS.gene78383:intron | 40.0% | |
| AGCAAGAGAGAGATGGATAT+TGG | + | chr2.3:5197000-5197019 | MS.gene78383:CDS | 40.0% | |
| ATACGCAGAAAAAATGTGGG+AGG | + | chr2.3:5197432-5197451 | MS.gene78383:intron | 40.0% | |
| ATGAGATGATTAAGGCTGGT+AGG | + | chr2.3:5196695-5196714 | MS.gene78383:CDS | 40.0% | |
| CAAGATGAGATGATTAAGGC+TGG | + | chr2.3:5196691-5196710 | MS.gene78383:CDS | 40.0% | |
| CAATCTCCAATACCCTTGTA+AGG | - | chr2.3:5196730-5196749 | None:intergenic | 40.0% | |
| CCAACAGTAGCACAAAAGTT+TGG | + | chr2.3:5196442-5196461 | MS.gene78383:CDS | 40.0% | |
| CTTCTACGAACAGTGTCTAA+AGG | - | chr2.3:5198162-5198181 | None:intergenic | 40.0% | |
| GGATATTGGAAAGTCTTTGC+AGG | + | chr2.3:5197014-5197033 | MS.gene78383:CDS | 40.0% | |
| GGCTTCAATGTTTCAGTTGT+TGG | + | chr2.3:5197224-5197243 | MS.gene78383:CDS | 40.0% | |
| GGTCCAAAATCTCTCTTCAA+AGG | + | chr2.3:5198258-5198277 | MS.gene78383:CDS | 40.0% | |
| TGGAACAAACACTGCATTTG+AGG | - | chr2.3:5196551-5196570 | None:intergenic | 40.0% | |
| TTGCAATCAGATGGTATTGC+TGG | + | chr2.3:5197191-5197210 | MS.gene78383:CDS | 40.0% | |
| ! | AAATCTCTCTTCAAAGGTGC+TGG | + | chr2.3:5198264-5198283 | MS.gene78383:CDS | 40.0% |
| ! | AGGTTTTTCTGAACCTCCAT+AGG | - | chr2.3:5196503-5196522 | None:intergenic | 40.0% |
| ! | GTGGGAGGTTTTTACCTTAA+AGG | + | chr2.3:5197447-5197466 | MS.gene78383:intron | 40.0% |
| ! | TATCCGTTACTTTCCAACAC+AGG | + | chr2.3:5196813-5196832 | MS.gene78383:CDS | 40.0% |
| ! | TTCCGTCTTTGTTTACTCGT+TGG | + | chr2.3:5197073-5197092 | MS.gene78383:CDS | 40.0% |
| ! | TTTGTGCTACTGTTGGGTAT+TGG | - | chr2.3:5196438-5196457 | None:intergenic | 40.0% |
| !! | CCAAACTTTTGTGCTACTGT+TGG | - | chr2.3:5196445-5196464 | None:intergenic | 40.0% |
| !! | CTTTGCGACTGATTTTCTCA+TGG | + | chr2.3:5196597-5196616 | MS.gene78383:CDS | 40.0% |
| !! | GCACCTTTGAAGAGAGATTT+TGG | - | chr2.3:5198264-5198283 | None:intergenic | 40.0% |
| !! | GGAAAGAAATATGGTTCTGG+TGG | + | chr2.3:5198360-5198379 | MS.gene78383:CDS | 40.0% |
| !! | GTGTACCGTGGTTTGTATTT+TGG | + | chr2.3:5197254-5197273 | MS.gene78383:CDS | 40.0% |
| !!! | CCCACATTTTTTCTGCGTAT+TGG | - | chr2.3:5197432-5197451 | None:intergenic | 40.0% |
| !!! | CGTATTGGTTTTGACATGAG+AGG | - | chr2.3:5197417-5197436 | None:intergenic | 40.0% |
| AACATTCTTCGAGCAGTTGC+TGG | + | chr2.3:5198291-5198310 | MS.gene78383:CDS | 45.0% | |
| AACTGTAACAGCCCATCCTA+GGG | - | chr2.3:5198118-5198137 | None:intergenic | 45.0% | |
| CTGATTGAACCGGATTGAAC+TGG | - | chr2.3:5197778-5197797 | None:intergenic | 45.0% | |
| GGTAGGGGCAGATTAAATCA+TGG | + | chr2.3:5197871-5197890 | MS.gene78383:intron | 45.0% | |
| GTTGGAATCATTGTGTACCG+TGG | + | chr2.3:5197242-5197261 | MS.gene78383:CDS | 45.0% | |
| TTCTCTTAAGCCAGTGCTCT+TGG | + | chr2.3:5197286-5197305 | MS.gene78383:CDS | 45.0% | |
| ! | CAACATTTTCGACGGTAGAG+TGG | - | chr2.3:5197959-5197978 | None:intergenic | 45.0% |
| ! | GAACGTTTCAGGTAAGAGTG+AGG | + | chr2.3:5197312-5197331 | MS.gene78383:intron | 45.0% |
| ! | TCTGAGCCTTACAAGGGTAT+TGG | + | chr2.3:5196721-5196740 | MS.gene78383:CDS | 45.0% |
| !! | GGATTTACTTCGCTTTGGAG+AGG | + | chr2.3:5196775-5196794 | MS.gene78383:CDS | 45.0% |
| !! | GGTATTGCTGGTCTTTATCG+CGG | + | chr2.3:5197203-5197222 | MS.gene78383:CDS | 45.0% |
| AGAAGCTTCACGCGCTCAAT+AGG | - | chr2.3:5196661-5196680 | None:intergenic | 50.0% | |
| AGGCTCTCTGAGCCTTACAA+GGG | + | chr2.3:5196715-5196734 | MS.gene78383:CDS | 50.0% | |
| ATCCTAGGGCAAAGCTAGCT+AGG | - | chr2.3:5198104-5198123 | None:intergenic | 50.0% | |
| CAACTGTAACAGCCCATCCT+AGG | - | chr2.3:5198119-5198138 | None:intergenic | 50.0% | |
| CTTAAGCCAGTGCTCTTGGT+AGG | + | chr2.3:5197290-5197309 | MS.gene78383:CDS | 50.0% | |
| GCTCTTGGTAGGAACGTTTC+AGG | + | chr2.3:5197301-5197320 | MS.gene78383:CDS | 50.0% | |
| GGTGGAGAGAGGCAATTCAA+TGG | + | chr2.3:5197143-5197162 | MS.gene78383:CDS | 50.0% | |
| TAGGCTCTCTGAGCCTTACA+AGG | + | chr2.3:5196714-5196733 | MS.gene78383:CDS | 50.0% | |
| TCCACCTTTCTTCGTGGACT+TGG | - | chr2.3:5197129-5197148 | None:intergenic | 50.0% | |
| ! | AACGTTCCTACCAAGAGCAC+TGG | - | chr2.3:5197299-5197318 | None:intergenic | 50.0% |
| !! | AGCTAGCTTTGCCCTAGGAT+GGG | + | chr2.3:5198104-5198123 | MS.gene78383:CDS | 50.0% |
| !! | CTAGGATGGGCTGTTACAGT+TGG | + | chr2.3:5198117-5198136 | MS.gene78383:CDS | 50.0% |
| !! | GCGACTGATTTTCTCATGGG+TGG | + | chr2.3:5196601-5196620 | MS.gene78383:CDS | 50.0% |
| !! | TAGCTAGCTTTGCCCTAGGA+TGG | + | chr2.3:5198103-5198122 | MS.gene78383:CDS | 50.0% |
| !! | TTCCTAGCTAGCTTTGCCCT+AGG | + | chr2.3:5198099-5198118 | MS.gene78383:CDS | 50.0% |
| CCACGAAGAAAGGTGGAGAG+AGG | + | chr2.3:5197132-5197151 | MS.gene78383:CDS | 55.0% | |
| CCTCTCTCCACCTTTCTTCG+TGG | - | chr2.3:5197135-5197154 | None:intergenic | 55.0% | |
| GACGCCAAGTCCACGAAGAA+AGG | + | chr2.3:5197122-5197141 | MS.gene78383:CDS | 55.0% | |
| GCCAAGTCCACGAAGAAAGG+TGG | + | chr2.3:5197125-5197144 | MS.gene78383:CDS | 55.0% | |
| TTCGACGGTAGAGTGGCTTG+AGG | - | chr2.3:5197952-5197971 | None:intergenic | 55.0% | |
| !! | ATTGCATCTGGTGCTGCAGC+AGG | + | chr2.3:5197041-5197060 | MS.gene78383:CDS | 55.0% |
| CTTCGAGCAGTTGCTGGTGC+TGG | + | chr2.3:5198297-5198316 | MS.gene78383:CDS | 60.0% | |
| TGGACTTGGCGTCGCTTGCA+AGG | - | chr2.3:5197115-5197134 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 5196418 | 5198389 | 5196418 | ID=MS.gene78383 |
| chr2.3 | mRNA | 5196418 | 5198389 | 5196418 | ID=MS.gene78383.t1;Parent=MS.gene78383 |
| chr2.3 | exon | 5196418 | 5196834 | 5196418 | ID=MS.gene78383.t1.exon1;Parent=MS.gene78383.t1 |
| chr2.3 | CDS | 5196418 | 5196834 | 5196418 | ID=cds.MS.gene78383.t1;Parent=MS.gene78383.t1 |
| chr2.3 | exon | 5196951 | 5197322 | 5196951 | ID=MS.gene78383.t1.exon2;Parent=MS.gene78383.t1 |
| chr2.3 | CDS | 5196951 | 5197322 | 5196951 | ID=cds.MS.gene78383.t1;Parent=MS.gene78383.t1 |
| chr2.3 | exon | 5198093 | 5198389 | 5198093 | ID=MS.gene78383.t1.exon3;Parent=MS.gene78383.t1 |
| chr2.3 | CDS | 5198093 | 5198389 | 5198093 | ID=cds.MS.gene78383.t1;Parent=MS.gene78383.t1 |
| Gene Sequence |
| Protein sequence |
