AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049768

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049768.t1 MTR_4g057345 97.898 761 15 1 1 761 1 760 0.0 1526
MS.gene049768.t1 MTR_4g057340 84.072 722 106 3 43 761 1 716 0.0 1233
MS.gene049768.t1 MTR_8g468400 67.507 714 208 6 56 761 1 698 0.0 961
MS.gene049768.t1 MTR_7g082860 38.941 642 362 10 149 765 765 1401 2.89e-156 491
MS.gene049768.t1 MTR_7g082860 37.500 648 350 12 149 765 765 1388 6.40e-142 452
MS.gene049768.t1 MTR_7g082860 39.372 541 302 7 149 666 765 1302 8.88e-131 421
MS.gene049768.t1 MTR_7g082860 39.258 512 285 7 149 637 765 1273 3.59e-119 389
MS.gene049768.t1 MTR_7g082860 37.121 396 234 4 149 532 765 1157 5.47e-83 287
MS.gene049768.t1 MTR_2g038030 26.419 511 287 19 274 746 123 582 2.39e-33 138
MS.gene049768.t1 MTR_2g038030 26.419 511 287 19 274 746 123 582 3.18e-33 137
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049768.t1 AT1G08130 66.067 778 242 11 1 761 1 773 0.0 1015
MS.gene049768.t1 AT1G49250 61.305 659 222 3 104 761 14 640 0.0 805
MS.gene049768.t1 AT1G66730 38.367 649 375 9 146 771 748 1394 4.16e-148 469
MS.gene049768.t1 AT5G57160 25.328 533 308 22 253 746 104 585 1.89e-24 110
MS.gene049768.t1 AT5G57160 28.244 262 145 10 517 746 1 251 4.07e-14 77.0

Find 173 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAAGGAGACTGAATTTC+AGG 0.197824 4.2:+46351737 None:intergenic
TGAAATTCTAAATAAGTTTC+AGG 0.202495 4.2:-46351355 MS.gene049768:CDS
TTTGATTTGTTGTACCTTAA+TGG 0.213245 4.2:-46349694 MS.gene049768:CDS
ATTGAGACAGATACATTTCT+TGG 0.216627 4.2:-46351209 MS.gene049768:intron
ATCCGAGTTCGGTTGTTTGC+TGG 0.220406 4.2:-46354559 MS.gene049768:CDS
GCAGATTAAGATTCAGTATA+AGG 0.255701 4.2:-46354279 MS.gene049768:intron
TGGTGATGCTTCGATTATTA+AGG 0.267756 4.2:-46354333 MS.gene049768:CDS
ACAGAGAATCCTTCCTTTCC+AGG 0.271926 4.2:-46349999 MS.gene049768:intron
GGAGTAAAATCACATTTCTT+TGG 0.281886 4.2:+46351426 None:intergenic
TCCGTTTCTGTTTCTCTGTT+TGG 0.297444 4.2:-46354519 MS.gene049768:CDS
CCCACTGCAGCTCGGTAAAC+AGG 0.304641 4.2:+46347701 None:intergenic
ACCTCTTTCGACGAAGAATC+TGG 0.312752 4.2:-46349146 MS.gene049768:CDS
AGCCTGATGCTTTGACTATT+AGG 0.315018 4.2:-46353631 MS.gene049768:CDS
GGCGGCGGCGGCGCGTGCGC+CGG 0.325535 4.2:+46354838 None:intergenic
GGCGCATGAAGGGTTGGAAT+TGG 0.333543 4.2:-46354360 MS.gene049768:CDS
GAAACTGAAGAAAGATTATA+TGG 0.336761 4.2:-46348603 MS.gene049768:CDS
TTTCAAAGCATTTGTAAGAT+AGG 0.347737 4.2:-46348212 MS.gene049768:intron
GAAGAAGTGCTTGGCCATTA+AGG 0.354488 4.2:+46349680 None:intergenic
TATAAATGTTCACAGGAATC+TGG 0.355908 4.2:-46352019 MS.gene049768:intron
TTCTTCATGAACAGTTTCTT+CGG 0.359805 4.2:+46354682 None:intergenic
CACTCCTTACGGATGGTGTA+TGG 0.366647 4.2:-46351455 MS.gene049768:CDS
AGAGCCAGGGACCTTTGGTT+TGG 0.369744 4.2:+46348026 None:intergenic
TGTAGCTTTGAGTGACATAA+AGG 0.375806 4.2:-46349737 MS.gene049768:CDS
GGAGAGAGGGAGTGAGAGAA+TGG 0.378469 4.2:+46354922 None:intergenic
GAGCCAGGGACCTTTGGTTT+GGG 0.389083 4.2:+46348027 None:intergenic
TCACTAGATTTGGTACCTAT+TGG 0.390041 4.2:-46348486 MS.gene049768:CDS
TTCCAGACAAAATTGCGAAT+TGG 0.396547 4.2:-46351833 MS.gene049768:intron
TTACTCCTGGTGTTCCGGTT+GGG 0.398083 4.2:-46351410 MS.gene049768:CDS
GCCTGCTCAGGAGCTTTGTC+AGG 0.402859 4.2:+46347490 None:intergenic
TAATGGCCAAGCACTTCTTC+AGG 0.406702 4.2:-46349677 MS.gene049768:CDS
TCCGAGTTCGGTTGTTTGCT+GGG 0.407250 4.2:-46354558 MS.gene049768:CDS
CATAGGGGACTCACTAGATT+TGG 0.414067 4.2:-46348496 MS.gene049768:CDS
GAAGGGTTGGAATTGGGAAT+TGG 0.414979 4.2:-46354353 MS.gene049768:CDS
ATATATAATCCGTTTGCTAC+AGG 0.417845 4.2:-46351924 MS.gene049768:intron
CCTCCAAGCGGTCACTCAAC+TGG 0.422032 4.2:-46348628 MS.gene049768:CDS
TCAGACGAGGAGGCCTGCTC+AGG 0.423980 4.2:+46347478 None:intergenic
TTGAGTGGCGATGGAGGAGT+AGG 0.431353 4.2:+46354767 None:intergenic
TTGTCGAAGGCGGAGGGTGG+TGG 0.431407 4.2:+46354869 None:intergenic
TCTTCATGAACAGTTTCTTC+GGG 0.434070 4.2:+46354683 None:intergenic
CAGATACATTTCTTGGAGAA+TGG 0.437323 4.2:-46351202 MS.gene049768:CDS
TCGAAGATGATGATGTGTTT+CGG 0.438288 4.2:+46354645 None:intergenic
TTTACTCCTGGTGTTCCGGT+TGG 0.439220 4.2:-46351411 MS.gene049768:CDS
TACACCGGAGGATCTTGTTC+CGG 0.442280 4.2:-46354414 MS.gene049768:CDS
GGCGAGTTTCGATCCGAGTT+CGG 0.444692 4.2:-46354570 MS.gene049768:CDS
AGAGGGAGTGAGAGAATGGA+AGG 0.445413 4.2:+46354926 None:intergenic
GCGCATGAAGGGTTGGAATT+GGG 0.446162 4.2:-46354359 MS.gene049768:CDS
GTACCTATTGGTGCTTTCCA+TGG 0.447882 4.2:-46348474 MS.gene049768:CDS
GCCTGACAAAGCTCCTGAGC+AGG 0.451547 4.2:-46347491 MS.gene049768:CDS
ATGTTGTTGCTGCAGTTTCA+AGG 0.451764 4.2:-46351126 MS.gene049768:intron
GGAGATGAGGAAGGTGGAGA+GGG 0.459399 4.2:+46354806 None:intergenic
TTCCCCGTCTAGTTCGAGTT+CGG 0.467023 4.2:-46347513 MS.gene049768:CDS
AGCTCGGTAAACAGGGCTAA+TGG 0.467833 4.2:+46347709 None:intergenic
CGACCATGGAAAGCACCAAT+AGG 0.468385 4.2:+46348471 None:intergenic
TGATGTCTTGTAGGTGTGTA+TGG 0.470234 4.2:-46348275 MS.gene049768:intron
AATTGTGTCTGCACTCCTTA+CGG 0.472771 4.2:-46351466 MS.gene049768:CDS
TTCCTAATAGTCAAAGCATC+AGG 0.474419 4.2:+46353629 None:intergenic
TTCGACGACAAATAAACAAC+CGG 0.475389 4.2:+46354395 None:intergenic
CCAGTTGAGTGACCGCTTGG+AGG 0.476893 4.2:+46348628 None:intergenic
GAAACTGCAGCAACAACATC+AGG 0.477339 4.2:+46351130 None:intergenic
CCCTGTTTACCGAGCTGCAG+TGG 0.477713 4.2:-46347702 MS.gene049768:CDS
AATCAATCAATCCTGATGTA+TGG 0.482280 4.2:-46347907 MS.gene049768:CDS
GGGCATAGTAGATTCCAATA+AGG 0.484866 4.2:-46347681 MS.gene049768:intron
TTTGACAGCATAGGCCCAAC+CGG 0.485180 4.2:+46351396 None:intergenic
CAGCCAGTTGAGTGACCGCT+TGG 0.486186 4.2:+46348625 None:intergenic
TGTACTCTGACCTAGCTTGA+AGG 0.486426 4.2:+46347169 None:intergenic
ATTGGTGCTTTCCATGGTCG+CGG 0.486744 4.2:-46348468 MS.gene049768:CDS
GGTAAACAGGGCTAATGGTC+AGG 0.487201 4.2:+46347714 None:intergenic
GGGAATAGTCGCTGAATTGA+AGG 0.489755 4.2:-46354621 MS.gene049768:CDS
CATGAGTTTGTCGAAGGCGG+AGG 0.491912 4.2:+46354862 None:intergenic
CAGAGAAACAGAAACGGAAC+AGG 0.491931 4.2:+46354524 None:intergenic
TTCTTTCATTTAGGTGTGGG+AGG 0.492239 4.2:-46347750 MS.gene049768:intron
TGAGTGGCGATGGAGGAGTA+GGG 0.493124 4.2:+46354768 None:intergenic
AACATTTCATCTTATTGCAA+AGG 0.493161 4.2:-46353597 MS.gene049768:intron
CTGACCTAGCTTGAAGGTAA+AGG 0.493868 4.2:+46347175 None:intergenic
CAACAAGAAGTGACTTTATG+TGG 0.495053 4.2:+46351969 None:intergenic
AGAAATGCTGAGCGGAACAC+TGG 0.495543 4.2:-46351160 MS.gene049768:CDS
CAAACTCTCTTGGCTGCCTT+AGG 0.497744 4.2:-46351800 MS.gene049768:CDS
AGGCCGAACTCGAACTAGAC+GGG 0.497952 4.2:+46347510 None:intergenic
AATTAACTTACCTCTTCAAA+AGG 0.498329 4.2:+46351722 None:intergenic
TGACAGGACAAAGGTGACTT+AGG 0.501127 4.2:-46353698 MS.gene049768:intron
TCCAGATTCTTCGTCGAAAG+AGG 0.501881 4.2:+46349145 None:intergenic
CGCTTGCTGAGGCGTGTGGA+AGG 0.510484 4.2:-46354310 MS.gene049768:CDS
AGCAAACGGATTATATATAG+AGG 0.513938 4.2:+46351929 None:intergenic
AGTCGCTGAATTGAAGGAAA+AGG 0.514554 4.2:-46354615 MS.gene049768:CDS
CTCGCATCAAACCATACATC+AGG 0.515232 4.2:+46347896 None:intergenic
CATGGTCGCGGGAAACGTAC+AGG 0.516443 4.2:-46348456 MS.gene049768:intron
AGGAGATGAGGAAGGTGGAG+AGG 0.517494 4.2:+46354805 None:intergenic
AGAATTGCGCCGGCGCATGA+AGG 0.520567 4.2:-46354371 MS.gene049768:CDS
CTTCAGTGTACACAGCAGCT+TGG 0.521080 4.2:+46351777 None:intergenic
GATTATTAAGGCGCTTGCTG+AGG 0.522455 4.2:-46354321 MS.gene049768:CDS
TAGAATTTCAGATACACCCT+TGG 0.523022 4.2:+46351368 None:intergenic
GCAGGCCTCCTCGTCTGAGC+AGG 0.524759 4.2:-46347473 MS.gene049768:intron
GATGTGTTTCGGATCTTGCT+CGG 0.526616 4.2:+46354656 None:intergenic
AATTCCAACCCTTCATGCGC+CGG 0.528853 4.2:+46354362 None:intergenic
ATATGCCGAGCAAACTCTCT+TGG 0.529888 4.2:-46351810 MS.gene049768:CDS
GCCAAACAGAGAAACAGAAA+CGG 0.531840 4.2:+46354518 None:intergenic
ATGAGATTACCTGGAAAGGA+AGG 0.533507 4.2:+46349990 None:intergenic
ATGCAACAAGTTCACAATCA+AGG 0.533772 4.2:+46350035 None:intergenic
CCGCTTGGAGGGTTCATATG+TGG 0.534655 4.2:+46348640 None:intergenic
TCCGCAGCTGAAGAAGAAAC+CGG 0.534838 4.2:-46354591 MS.gene049768:CDS
TTTCAGACATACTATAAATG+TGG 0.536516 4.2:-46347932 MS.gene049768:intron
TGCGCCGGCGCATGAAGGGT+TGG 0.538670 4.2:-46354366 MS.gene049768:CDS
ACTCCTTACGGATGGTGTAT+GGG 0.541670 4.2:-46351454 MS.gene049768:CDS
GGCAGCCAAGAGAGTTTGCT+CGG 0.541848 4.2:+46351805 None:intergenic
TCCCAGCAAACAACCGAACT+CGG 0.542601 4.2:+46354557 None:intergenic
GGCGAGGAGTGGAGGAGAGA+GGG 0.547227 4.2:+46354909 None:intergenic
CGGCGAGGAGTGGAGGAGAG+AGG 0.550622 4.2:+46354908 None:intergenic
ATACGATGGAGAGCGTGCTC+AGG 0.551459 4.2:-46351307 MS.gene049768:intron
GAGTGACGAAGAAAATTTGA+CGG 0.552014 4.2:+46354952 None:intergenic
AACAACATCAAATGATGTTG+AGG 0.552524 4.2:-46349102 MS.gene049768:CDS
CAGTTGAGTGACCGCTTGGA+GGG 0.554490 4.2:+46348629 None:intergenic
CGACATTGCGCGGCGAGGAG+TGG 0.558536 4.2:+46354898 None:intergenic
ATAGGCCCAACCGGAACACC+AGG 0.558999 4.2:+46351405 None:intergenic
GAGTGGCGATGGAGGAGTAG+GGG 0.559751 4.2:+46354769 None:intergenic
GTACACAGCAGCTTGGCCTA+AGG 0.560199 4.2:+46351784 None:intergenic
GCCGGTTTCTTCTTCAGCTG+CGG 0.560705 4.2:+46354590 None:intergenic
GGAGACTGAATTTCAGGAGG+CGG 0.562772 4.2:+46351743 None:intergenic
AAATTGCAACCTGTAGCAAA+CGG 0.563169 4.2:+46351915 None:intergenic
AAATCCTTTACCTTCAAGCT+AGG 0.563170 4.2:-46347179 MS.gene049768:CDS
TGATGCTTTGACTATTAGGA+AGG 0.564438 4.2:-46353627 MS.gene049768:CDS
CATTGCGCGGCGAGGAGTGG+AGG 0.567800 4.2:+46354901 None:intergenic
GAGGGAGTGAGAGAATGGAA+GGG 0.569043 4.2:+46354927 None:intergenic
AAACACATCATCATCTTCGA+AGG 0.569439 4.2:-46354642 MS.gene049768:CDS
CCTGTTTACCGAGCTGCAGT+GGG 0.571614 4.2:-46347701 MS.gene049768:CDS
TGCCAAATACCTAATCATGT+TGG 0.571918 4.2:+46347135 None:intergenic
TTGGTGCTTTCCATGGTCGC+GGG 0.573753 4.2:-46348467 MS.gene049768:CDS
ACATTTCTTGGAGAATGGCT+CGG 0.574669 4.2:-46351197 MS.gene049768:CDS
TTGACAAAGCCATTGATGCA+AGG 0.578584 4.2:-46349064 MS.gene049768:intron
CTGTACGTTTCCCGCGACCA+TGG 0.581034 4.2:+46348457 None:intergenic
TGGGAATCACTTTAGAGCGA+AGG 0.581370 4.2:+46348046 None:intergenic
ACAACCGGAACAAGATCCTC+CGG 0.582042 4.2:+46354410 None:intergenic
ACGGAAATGCGAGTAGTGAA+CGG 0.583116 4.2:+46354971 None:intergenic
GCAAATGAGATTACCTGGAA+AGG 0.583985 4.2:+46349986 None:intergenic
GCCTTCGACAAACTCATGTC+CGG 0.584797 4.2:-46354857 MS.gene049768:CDS
GTCGTCGAATAGAATTGCGC+CGG 0.586883 4.2:-46354381 MS.gene049768:CDS
GAAATGCTGAGCGGAACACT+GGG 0.587282 4.2:-46351159 MS.gene049768:CDS
GAATTGCGCCGGCGCATGAA+GGG 0.595193 4.2:-46354370 MS.gene049768:CDS
CGTTTCTTAGGAGATGAGGA+AGG 0.602016 4.2:+46354797 None:intergenic
CAGGCCGAACTCGAACTAGA+CGG 0.602214 4.2:+46347509 None:intergenic
TTCTTAGGAGATGAGGAAGG+TGG 0.603542 4.2:+46354800 None:intergenic
TAAAACGTGTTACCTCTCTA+CGG 0.604211 4.2:+46349641 None:intergenic
GTTCCCATACACCATCCGTA+AGG 0.607762 4.2:+46351451 None:intergenic
CCACTGCAGCTCGGTAAACA+GGG 0.610534 4.2:+46347702 None:intergenic
AACTGTGATACATGCTACAC+CGG 0.611772 4.2:-46354429 MS.gene049768:CDS
GCCGGACATGAGTTTGTCGA+AGG 0.614625 4.2:+46354856 None:intergenic
AAGGCGCTTGCTGAGGCGTG+TGG 0.616663 4.2:-46354314 MS.gene049768:CDS
GGACATGAGTTTGTCGAAGG+CGG 0.617303 4.2:+46354859 None:intergenic
AGTTTGTCGAAGGCGGAGGG+TGG 0.619661 4.2:+46354866 None:intergenic
TATGCTGTCAAAAGCAACCA+AGG 0.619881 4.2:-46351385 MS.gene049768:CDS
ATGAGTTTGTCGAAGGCGGA+GGG 0.621134 4.2:+46354863 None:intergenic
TATCGTTGTCATAGCACGCA+AGG 0.623901 4.2:+46348243 None:intergenic
CTACTATGCCCACTGCAGCT+CGG 0.628696 4.2:+46347693 None:intergenic
AACACATCATCATCTTCGAA+GGG 0.629193 4.2:-46354641 MS.gene049768:CDS
GATATGATTAACGAAGAGAG+TGG 0.632135 4.2:-46354491 MS.gene049768:CDS
TAAAGTGATTCCCAAACCAA+AGG 0.638299 4.2:-46348037 MS.gene049768:intron
AAACTTGAAAATCCGTAGAG+AGG 0.640219 4.2:-46349653 MS.gene049768:intron
GTGTCTGCACTCCTTACGGA+TGG 0.640866 4.2:-46351462 MS.gene049768:CDS
TTTGACGACATTGCGCGGCG+AGG 0.649965 4.2:+46354893 None:intergenic
AAAGGAGACTGAATTTCAGG+AGG 0.653188 4.2:+46351740 None:intergenic
GGCTCTACTTTGCAGCATAG+GGG 0.664924 4.2:-46348511 MS.gene049768:intron
GTACTTTACCTGCTCAGACG+AGG 0.665242 4.2:+46347465 None:intergenic
GCATCATAGACTGAGAAGAA+CGG 0.671258 4.2:+46353657 None:intergenic
ATGCTGTCAAAAGCAACCAA+GGG 0.671976 4.2:-46351384 MS.gene049768:CDS
GGCCGAACTCGAACTAGACG+GGG 0.685841 4.2:+46347511 None:intergenic
GAACTCGGATCGAAACTCGC+CGG 0.689493 4.2:+46354572 None:intergenic
GTGTTTCGGATCTTGCTCGG+TGG 0.690872 4.2:+46354659 None:intergenic
TGTATGGTTTGATGCGAGTG+AGG 0.695618 4.2:-46347891 MS.gene049768:intron
TGTGATACATGCTACACCGG+AGG 0.695818 4.2:-46354426 MS.gene049768:CDS
ACGTGTGAATACAAATACGA+TGG 0.698464 4.2:-46351321 MS.gene049768:CDS
GTTCTTCTCAGTCTATGATG+CGG 0.698544 4.2:-46353655 MS.gene049768:CDS
CCACATATGAACCCTCCAAG+CGG 0.704525 4.2:-46348640 MS.gene049768:CDS
CTTTACCTGCTCAGACGAGG+AGG 0.708129 4.2:+46347468 None:intergenic
TTTACAGTAGAAATGCTGAG+CGG 0.802574 4.2:-46351168 MS.gene049768:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.2 gene 46347149 46355029 46347149 ID=MS.gene049768
chr4.2 mRNA 46347149 46355029 46347149 ID=MS.gene049768.t1;Parent=MS.gene049768
chr4.2 exon 46354280 46355029 46354280 ID=MS.gene049768.t1.exon1;Parent=MS.gene049768.t1
chr4.2 CDS 46354280 46355029 46354280 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46353598 46353714 46353598 ID=MS.gene049768.t1.exon2;Parent=MS.gene049768.t1
chr4.2 CDS 46353598 46353714 46353598 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46351925 46352026 46351925 ID=MS.gene049768.t1.exon3;Parent=MS.gene049768.t1
chr4.2 CDS 46351925 46352026 46351925 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46351733 46351849 46351733 ID=MS.gene049768.t1.exon4;Parent=MS.gene049768.t1
chr4.2 CDS 46351733 46351849 46351733 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46351308 46351538 46351308 ID=MS.gene049768.t1.exon5;Parent=MS.gene049768.t1
chr4.2 CDS 46351308 46351538 46351308 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46351127 46351221 46351127 ID=MS.gene049768.t1.exon6;Parent=MS.gene049768.t1
chr4.2 CDS 46351127 46351221 46351127 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46350000 46350087 46350000 ID=MS.gene049768.t1.exon7;Parent=MS.gene049768.t1
chr4.2 CDS 46350000 46350087 46350000 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46349654 46349785 46349654 ID=MS.gene049768.t1.exon8;Parent=MS.gene049768.t1
chr4.2 CDS 46349654 46349785 46349654 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46349065 46349177 46349065 ID=MS.gene049768.t1.exon9;Parent=MS.gene049768.t1
chr4.2 CDS 46349065 46349177 46349065 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46348599 46348700 46348599 ID=MS.gene049768.t1.exon10;Parent=MS.gene049768.t1
chr4.2 CDS 46348599 46348700 46348599 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46348457 46348518 46348457 ID=MS.gene049768.t1.exon11;Parent=MS.gene049768.t1
chr4.2 CDS 46348457 46348518 46348457 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46348213 46348284 46348213 ID=MS.gene049768.t1.exon12;Parent=MS.gene049768.t1
chr4.2 CDS 46348213 46348284 46348213 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46348038 46348111 46348038 ID=MS.gene049768.t1.exon13;Parent=MS.gene049768.t1
chr4.2 CDS 46348038 46348111 46348038 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46347892 46347948 46347892 ID=MS.gene049768.t1.exon14;Parent=MS.gene049768.t1
chr4.2 CDS 46347892 46347948 46347892 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46347682 46347759 46347682 ID=MS.gene049768.t1.exon15;Parent=MS.gene049768.t1
chr4.2 CDS 46347682 46347759 46347682 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46347474 46347551 46347474 ID=MS.gene049768.t1.exon16;Parent=MS.gene049768.t1
chr4.2 CDS 46347474 46347551 46347474 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
chr4.2 exon 46347149 46347205 46347149 ID=MS.gene049768.t1.exon17;Parent=MS.gene049768.t1
chr4.2 CDS 46347149 46347205 46347149 ID=cds.MS.gene049768.t1;Parent=MS.gene049768.t1
Gene Sequence

>MS.gene049768

ATGTTAGCATTGCATTTCAAATCGTGTTTCTCTCTTCCGTTCACTACTCGCATTTCCGTCAAATTTTCTTCGTCACTCTTCCCTTCCATTCTCTCACTCCCTCTCTCCTCCACTCCTCGCCGCGCAATGTCGTCAAAACCACCACCCTCCGCCTTCGACAAACTCATGTCCGGCGCACGCGCCGCCGCCGCCAAGAAAAAACCCTCTCCACCTTCCTCATCTCCTAAGAAACGAAAATCCCCTACTCCTCCATCGCCACTCAAAACCCCAGATACCGTTCAAAACCCTGATAACAACCTCAAAACCCTAGAAACCGTTCAAAAACCCGAAGAAACTGTTCATGAAGAACCACCGAGCAAGATCCGAAACACATCATCATCTTCGAAGGGAATAGTCGCTGAATTGAAGGAAAAGGTTCCGCAGCTGAAGAAGAAACCGGCGAGTTTCGATCCGAGTTCGGTTGTTTGCTGGGAGAAAGACAAACCTGTTCCGTTTCTGTTTCTCTGTTTGGCGTTTGATATGATTAACGAAGAGAGTGGTAGAATTGTGATCACTGACATTGTGTGTAATTTGTTGAGAACTGTGATACATGCTACACCGGAGGATCTTGTTCCGGTTGTTTATTTGTCGTCGAATAGAATTGCGCCGGCGCATGAAGGGTTGGAATTGGGAATTGGTGATGCTTCGATTATTAAGGCGCTTGCTGAGGCGTGTGGAAGGACTGAGCAGCAGATTAAGATTCAGTATAAGGTTGTTTGTATGTTCCAATTTTAATTTTATTGTTGTTGCTAGGTTAAAGTACGACTTAAGTTGAAGGGAAAATTCTACCGGACAATTGTAAGACTGACGATGTTGTATGGGACAGAGTGTTGAGCTGTCAAGAACAAACGCAGAGATAAATTAAGCGTAGCAGAGGTGATGATACTGCCTTCGATGTGTTGTAAGATTAGACGAGATAGGATTAGAAATGACAATATTAGATAGGGAGTTGGGGTAACACCTATAGTAGAAATTGGAAAAGATGGTGGAAACTGGAAACTAGGCTTAGGTGTTTCGTGCCTAGATTCTTAGTAATGAGAGTAGATCAGAAGAAGAGTAGTCAAATCATTAGAAACAGAGGAAGACCTAGAAAAACTATAATAGAAACTATTAAGAAAGATCTAGAGTTTAATGAGTTGAATAAATATATGGCATATGGTAGAGCATTATGACGTCGTTTGATCCATGTAGCCGACCCACTCAGTGGGATAAAGCTTGATTGTTCTTGTTGTTATGTTATCTAAGAAGATGCTAACAGTTGTTTTGTTGTTGACAGGACAAAGGTGACTTAGGCTTAGTTGCGAAAGCTAGCCGTTCTTCTCAGTCTATGATGCGGAAGCCTGATGCTTTGACTATTAGGAAGGTTTTCAAAACATTTCATCTTATTGCAAAGGTACTTTACTGTCAATTTTGGAGCTTAAGTGGGTTTGTTGTTTGAGATATTGGTGTTTAGTGCTGTGTACAGAAGTGCAATCTTTATCAATGAAAGTTGGTTTTTCTATGCATGGGATAAACCTTTAAGGTGTTAGATTATACTATCAGTGTAGCCAAATGTCGGCTATGGAGGATTGCAGTGGTGGATTTTTTGACAAATGTTTCAGTCAATTTGTGAAGGATGGTGGTGCTATGGCGTTTTATGCTGAATTTTAGGCTTTCTGCCATGGTCTTCCATCCTTCATTGATAACACTGGCTACACTTTTGGAATTGGTTGAACTTGAACAAACAAATTGAAGCACATGCCATTTTTTGGTAATTAGTTGTAATGTGGCCACTGGTCAAAATATCGAATCCACAAATATGAGTTTGAGATTATCCGATTTTGAACACTTGGACTGTTTATCTCTTCACCTTTTGATATTTGTCATTAAAACAAAACAACCATATTCAGTTCGCTATGTTGATACTCGATCACGTTTAGGAGTTTATTTAAATTTTATATTGCACGCACCAATGTAATGTGTATGAGAGCTTCATTTGTTGTAGTTTTATAATCTTGCAGGCATATGTCTTTTGCTAAAAGCAAAGGCTTAACGATTTTTTTGCTGAATGTTAGTTTTTGTGGTTTAAATCAGTTGTTTTGTGTTTGTGTTTAGGGAAAAATACTCTTACCTCCCCTAAAATTTGTGCATATGTCACTCAGACCCCCTCTATTTTTTCACATGACAAATACCTCCCCTGTTGTTAGAGCCGTCCAGGTCTGTTCAATTCAAAAAAATTCTGAATACTCACACTCTCTTCCACCATGGAACCATCTTACGATACTTAAATATGAGTTAGTGGGTTTTTTTGGTTCTTGTGTGTTTCCGTTCCTACAGGTGTGTTTCTTGTGATTCTTTTTTTGTTTCTAATTGTTGTCCGTTCCTATCACAAGTTGATGCGTATCATCTACTCACTTTTTTTTTTTTTGCAAACACGTTTTGGGATAAAAATGGGGAAAACCAAATTAATAGGATGTTGTGGATTTTTTTATGGGGTGTGTGTATGATTCACATGGGAATAAGCGGCCTACACTCTGCAATGTTTTTGTGGGGATTTATCTTCAATGAAAGTAGTTTCAACTATGATACTAGAGATTTGAAATGAAGGGAAAAAAAGGTTTGAAAAGCTTACAACAATAGCAGTAATATTTGGTGGTTTTAGTGGAGGAAGATGAGCCTCATCTCATCCATTGAAAAGTAATGATATTGTTAACGGATTGATAACAGTGTTAAGTCAAAAAGGGAGGTGTCTGACAATTTTAGGTGAATTTATGGGAGGTTGGTGTCTATTATAAAACTAGAGGGGGTCTTTGTGTTATTTAAAGAGACCTCAGGGGAGGTTAGTGTTGTGTTTATGTTGCAGGTTAATATGCATGGTCTATTTCTTATTAGATAAGAGAAGATGGATTTGTTGGAATTTGGAACAATTTTTAGTTGAGTTATTAGAGTTTGCTACTGATTTGCCCTTACTATAAATGTTCACAGGAATCTGGAAAAGACAGTCAAGAGAAGAAAAAGAACCACATAAAGTCACTTCTTGTTGCTGCAACTGACTGTGAACCTCTATATATAATCCGTTTGCTACAGGTTGCAATTTTTCTGTTATACAAATAATTTTGTGGGTATACTTCACTATGTTAATTACTTGGATGTGTTTTCCAGACAAAATTGCGAATTGGATATGCCGAGCAAACTCTCTTGGCTGCCTTAGGCCAAGCTGCTGTGTACACTGAAGAACATTCTAAACCGCCTCCTGAAATTCAGTCTCCTTTTGAAGAGGTAAGTTAATTTTATTTAAGTAGGGTGAATGGTGATATGTGCTTTGTTTAAAACCTTTCGGGTGCATCAGCTCAATAAGTTGGAGACGGTTAGCTGCTGCTGAGATAGGTGACAATGCATTATGATGTTGGTGATGATACCAATATTTTCCTTTTATCTATATGTTTTTGACTTTTTGTTTCATTTTGCACCAGGCTGCTAAAATTGTTAAAAAAGTCTATTCTGTTCTTCCTGATTATGACAAAATTGTGTCTGCACTCCTTACGGATGGTGTATGGGAACTTCCAAAGAAATGTGATTTTACTCCTGGTGTTCCGGTTGGGCCTATGCTGTCAAAAGCAACCAAGGGTGTATCTGAAATTCTAAATAAGTTTCAGGATGTAGAGTTTACGTGTGAATACAAATACGATGGAGAGCGTGCTCAGGTGATGCTTCATGGTCATACATTCCATTAGAAACATAATGCTTATGATACTTATTATGTGCAATAACATTAGTTGTATTGAGACAGATACATTTCTTGGAGAATGGCTCGGTAGAGATTTACAGTAGAAATGCTGAGCGGAACACTGGGAAGTTTCCTGATGTTGTTGCTGCAGTTTCAAGGTAAAAATTATCAAACTGAGTTGTGAATATTATGTTTGAGATCTGATAGCATCTTTTCATGCCAATTATGAACATTTTCCGAACAACTTGAATTTGTATTTTTTAACAAAATTATTGAAGTTTTAGGGTTTAACCTTTCAATTAGAATAGAGCTTTGTGTAATGTGCTCAAGCAAATTAGTATTGCACCATGCATAAGCTTGTTTTCCACCGTTGGATTGGATCATTAAATCTCATCATATTTCTAATATTCTATTAATTTAATAGCGAGAGTTGTTGATCCATTGGTAGAAACAACCTTGTGTATGGTGCAAGACATATGTCCCTTGTGCATCATAGACTTGGCCTACAAATGGAGAAAAAATAATATTCGGAATAATAAAATAATACGGATATTGTCTGAATGATACATGTGATGTTTCGACAAACTATATATAAGGAAATTTAGAAATCAATTGTAAAGAGGTAATTTGAGATACTCTAATATATGTGTTACAATAAAATATTGTTGTGTTGCAATTTTTTTAATTTATTCTTACAGTCCTCCTTAAAGCAAAGCTCATTAAGCTATATAAAGAAAAATGTATATGGACTCGACAAAACATGATTGAAAGTCAACTCAGACTAAAAGAGGGCAGACAGACTATTTGGGATAAATGTATATTAAGGGTGATCGGAATTCATGCACGTCTGGCAAAAAGAAAAGAATCATAGATTAGAACATTGTGATATTAGAGTTTCAGATTTTGGAGAAACTTGGCAGTGGAATTGTGACATACAGATAATATAGGACGGTACTATAATGATACTATGTTGAAATTATAGTCTTTAGTCCTTACGATTTAAAGGGAGGAAATTAATACTCAGAATCAGAATAATATAATTGATTTGTTGTGAGTGACATGTTGGATGTCATGTTGAGATATCAGATTCCGAATCCTAATTATAGGACTACTGATTATATTGAAACAATTATGCCAGTTGCTTTCAAATAGAATTTTTCAACATCATAGTTTCTGATATTTGCTGTCACTGAACAGGTTAAAGAAATCATCTGTAACATCATTTATCCTTGATTGTGAACTTGTTGCATATGATCGTACAAAACAGAGAATCCTTCCTTTCCAGGTAATCTCATTTGCCGGTCCTTTAGTTTTACGTGTGGCAAAACATCATTTAATTATAGTCTGAAAACTTTTATACTATCAAGCGATCAAAATAAAATCCTTTTGCCACTAATGTCTGTGTTGTTTTACCTTTATTGGTGATTCAGCTTTCCAATTTCTGATATTGTGTTTGAGTTGAGATTAGCTAATGTTATTGTAACCTTACATCTTGACAGGTGCTTAGTACTCGTGCCCGCAAAAATGTAGCTTTGAGTGACATAAAGGTTGATGTTTGTGTCTTTGCTTTTGATTTGTTGTACCTTAATGGCCAAGCACTTCTTCAGGAAAACTTGAAAATCCGTAGAGAGGTAACACGTTTTATCTTTGCGTTGCTAATAGTTTCATTTCTGTTTTCTTTATTAAGCAGTTGAATCCATGATAGAGTTGGCGGAAGGGTGGAAACCTTGATGAAGCTTCTGCATTCTAAGACAATATTTGTAGCTACTGTCCACGTAAATATAAGAGGAGCTGTGTTAGGTAGAAGTTTAGAATAAAGAGGAATTAAAGTAGATAGGTCAAGGCAGTTAGTTAAAGGAGACTCAATTTGAGAAATAGTATAAATGAAGCATTGAGGAAATAGTATTTTTGAGAGTACCAAGCAAGAACTTTATTATCCCATGGGAAGAGTCTTTTCTTTTTTATTTTGAGGGAAGCTGGCCGATTGAATCTGTTTTCTACTGTTAATTTTAAGTAGTTCATTATTGTATATCATGCATCTCGAATGAGCGGTCTTCTCATTTTTTTTATAAGAACTGTATGTTGACAAGTGCCTAATTTTCTGCAGCATCTCTATACCTCTTTCGACGAAGAATCTGGATTCTTTCAGTTTGCAACATCAACAACATCAAATGATGTTGAGGAGATACAAAAATTTCTTGACAAAGCCATTGATGCAAGGTTTTTTTTTATATAGTTTTTTCTTTTTTTTAATTTCAATTCTAGTTCATTTAAATTCAAGATGTAGATAGAAATTTCATTATTTCGGCTGTAGTTATATGGGGGAACCCCTTTTTGGGCCCTGCGTATGAGGGAGCTTTGTGCACCGGGCTGCCCTTAAGTTATGTGGCACCATTTCTACTTAATTTAGTATACTCTTTAGTTGTCGTTTTCATGTGATTGCACTATTATCCAAAACATTTGATAGGAAGTGTAACACTTCATTGTATATCTAACTCACAGCTCTTCCAAATTTGGTTTCTCTTGCAATAATTTGAACAATTATTTTTATCATTTATCATTTGCCTTATCTCTTGATTTTCAGTTGTGAGGGATTAATTATTAAAACATTACATGAAGACGCCACATATGAACCCTCCAAGCGGTCACTCAACTGGCTGAAACTGAAGAAAGATTATATGGAAAAGTAAGGGACATGATATTTATTTTTCTTATTTTACTTTTATATTGATGTGTTTGCATTTATTTATCGGCTCTACTTTGCAGCATAGGGGACTCACTAGATTTGGTACCTATTGGTGCTTTCCATGGTCGCGGGAAACGTACAGGTGATCATATAACATACTCTTTAATGTGGTGATGCCTATTTTTGTTATCATTTTTAAGCCGATATTTCAATTAAATCTGAATATGGCTAGGCCTTGGGAGATTTTTTTGTGCTGTTAATTTATGCATTTAACTCAGTGGTCTGAAATGAATTAGTGACATGATGTCTTGTAGGTGTGTATGGTGCTTTTCTCCTTGCGTGCTATGACAACGATAACGAAGAGTTTCAAAGCATTTGTAAGATAGGTGAGCGTTTTATGTATAGAGCTCTTTTGTTTATTGAACTTAATTTTCTCACATTTTTTTACCAATAGTTTCTTACTTATACTTCATGTTATGGTGGGTAGGAACTGGATTCAAAGAAGAAGTGCTTGAAGAACGTTCTACTAGCCTTCGCTCTAAAGTGATTCCCAAACCAAAGGTCCCTGGCTCTTGTTTCTCTCCGAACCACCATTTCTGAGTTCTGCTTAGTATTTTATGAACTAATTCAAACTTGATCCTTTATTTCAGACATACTATAAATGTGGAGAATCAATCAATCCTGATGTATGGTTTGATGCGAGTGAGGTATTTTTTTTTTTTGTTTGCAAATGCCATCTCATTTTTTTTTTGTTTATTAATATTATCCAATAAAATTGCATTATGCTCACAAGCAATTTTCTTTGCATTAGTTATATATTATTATCTTCTTTCATTTAGGTGTGGGAGGTGAAAGCTGCAGACCTGACCATTAGCCCTGTTTACCGAGCTGCAGTGGGCATAGTAGATTCCAATAAGGTATTTGAAAAAATTTGAATTGATGATAAAAGGGTTAACTTAATTTAGAATTCGGCCTGTTCACATTGTGTAGTTGATAATGATAGCTTTTAACTTCTATTGATGGTACTTTTATATTTTCTGAATAAAGGGTATATCTCTTCGATTTCCCCGTCTAGTTCGAGTTCGGCCTGACAAAGCTCCTGAGCAGGCCTCCTCGTCTGAGCAGGTAAAGTACAGTCCAATCTTTCATTATCCAACTAACTGTATATGATAGGAGATTGAGAAAGAGTAAGGCAGGAAATAAATTGAATTATTTGGTCATTCTTTAACCACTTTCTTTCAGGTTGCTGAAATGTATAATGCTCAAAAACACAATCACAATGACAAACAGGATGACAATGAAGATGATTGAGGGAAAAAGTTTCCTTGCTTTTCTATGCTGTTAAACTATGAAATCTGAGCATTATTCTGATACCATGTGAGTAAATGTTAAGATGCAAATCCTTTACCTTCAAGCTAGGTCAGAGTACATTACTTCTTATCCAACATGA
Protein sequence

>MS.gene049768.t1

MLALHFKSCFSLPFTTRISVKFSSSLFPSILSLPLSSTPRRAMSSKPPPSAFDKLMSGARAAAAKKKPSPPSSSPKKRKSPTPPSPLKTPDTVQNPDNNLKTLETVQKPEETVHEEPPSKIRNTSSSSKGIVAELKEKVPQLKKKPASFDPSSVVCWEKDKPVPFLFLCLAFDMINEESGRIVITDIVCNLLRTVIHATPEDLVPVVYLSSNRIAPAHEGLELGIGDASIIKALAEACGRTEQQIKIQYKDKGDLGLVAKASRSSQSMMRKPDALTIRKVFKTFHLIAKESGKDSQEKKKNHIKSLLVAATDCEPLYIIRLLQTKLRIGYAEQTLLAALGQAAVYTEEHSKPPPEIQSPFEEAAKIVKKVYSVLPDYDKIVSALLTDGVWELPKKCDFTPGVPVGPMLSKATKGVSEILNKFQDVEFTCEYKYDGERAQIHFLENGSVEIYSRNAERNTGKFPDVVAAVSRLKKSSVTSFILDCELVAYDRTKQRILPFQVLSTRARKNVALSDIKVDVCVFAFDLLYLNGQALLQENLKIRREHLYTSFDEESGFFQFATSTTSNDVEEIQKFLDKAIDASCEGLIIKTLHEDATYEPSKRSLNWLKLKKDYMENIGDSLDLVPIGAFHGRGKRTGVYGAFLLACYDNDNEEFQSICKIGTGFKEEVLEERSTSLRSKVIPKPKTYYKCGESINPDVWFDASEVWEVKAADLTISPVYRAAVGIVDSNKGISLRFPRLVRVRPDKAPEQASSSEQMQILYLQARSEYITSYPT