AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene071460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071460.t1 MTR_1g083130 98.080 573 11 0 1 573 1 573 0.0 1149
MS.gene071460.t1 MTR_3g049990 32.439 410 230 8 26 433 152 516 5.98e-53 193
MS.gene071460.t1 MTR_7g056830 31.905 420 231 10 18 433 2 370 6.92e-52 184
MS.gene071460.t1 MTR_6g082080 31.667 420 232 10 18 433 2 370 4.94e-51 181
MS.gene071460.t1 MTR_2g041140 30.480 479 275 12 26 492 141 573 2.36e-50 185
MS.gene071460.t1 MTR_7g109720 29.880 415 246 7 25 437 231 602 1.59e-49 183
MS.gene071460.t1 MTR_3g449250 28.211 436 257 8 22 456 86 466 2.23e-42 160
MS.gene071460.t1 MTR_3g449250 28.211 436 257 8 22 456 86 466 5.42e-42 159
MS.gene071460.t1 MTR_6g005550 29.238 407 212 11 26 416 165 511 2.32e-41 159
MS.gene071460.t1 MTR_2g066050 28.571 413 239 8 26 432 53 415 1.26e-40 154
MS.gene071460.t1 MTR_2g032630 29.323 399 234 9 26 422 496 848 1.79e-40 158
MS.gene071460.t1 MTR_4g134170 28.271 428 242 8 25 432 286 668 3.72e-40 155
MS.gene071460.t1 MTR_3g467550 27.358 424 251 6 26 438 117 494 3.95e-40 154
MS.gene071460.t1 MTR_5g090120 27.506 429 247 9 15 433 70 444 5.48e-40 154
MS.gene071460.t1 MTR_2g007000 27.960 397 245 5 25 421 503 858 4.82e-39 154
MS.gene071460.t1 MTR_3g467550 28.040 403 233 6 47 438 107 463 5.71e-39 150
MS.gene071460.t1 MTR_2g438110 25.336 446 271 9 6 448 14 400 1.40e-38 147
MS.gene071460.t1 MTR_4g114120 28.125 416 233 9 27 422 141 510 8.40e-38 148
MS.gene071460.t1 MTR_6g005320 28.037 428 241 10 25 432 248 628 1.05e-37 148
MS.gene071460.t1 MTR_8g027770 27.739 429 261 8 4 421 176 566 1.53e-37 147
MS.gene071460.t1 MTR_7g076820 28.293 410 242 7 13 421 136 494 2.71e-37 145
MS.gene071460.t1 MTR_7g057250 25.758 528 275 18 18 477 153 631 2.80e-37 147
MS.gene071460.t1 MTR_7g076830 27.805 410 244 7 13 421 129 487 7.84e-37 144
MS.gene071460.t1 MTR_7g076800 27.805 410 244 7 13 421 127 485 1.18e-36 143
MS.gene071460.t1 MTR_2g100230 26.768 396 243 5 25 418 95 445 1.28e-36 143
MS.gene071460.t1 MTR_2g039960 27.139 409 243 7 26 431 41 397 2.76e-36 140
MS.gene071460.t1 MTR_8g018400 26.406 409 246 7 26 431 41 397 8.95e-36 139
MS.gene071460.t1 MTR_1g095810 26.619 417 235 12 25 424 144 506 1.58e-35 141
MS.gene071460.t1 MTR_4g125970 26.895 409 244 7 26 431 41 397 1.12e-34 135
MS.gene071460.t1 MTR_1g026830 26.253 419 234 11 25 424 146 508 4.64e-34 137
MS.gene071460.t1 MTR_4g105100 27.387 398 240 6 25 419 201 552 4.88e-34 137
MS.gene071460.t1 MTR_4g125970 26.895 409 244 7 26 431 58 414 4.94e-34 134
MS.gene071460.t1 MTR_2g099620 26.406 409 246 7 26 431 41 397 5.76e-34 134
MS.gene071460.t1 MTR_2g099620 26.747 415 247 8 20 431 21 381 6.55e-34 133
MS.gene071460.t1 MTR_4g059460 28.067 481 254 19 26 449 44 489 8.82e-34 136
MS.gene071460.t1 MTR_3g083690 27.251 411 235 11 26 418 145 509 1.32e-33 135
MS.gene071460.t1 MTR_1g054630 28.066 424 241 10 11 418 142 517 1.47e-33 135
MS.gene071460.t1 MTR_6g039840 27.635 427 250 10 26 437 110 492 2.71e-33 135
MS.gene071460.t1 MTR_7g100820 30.184 434 238 13 25 448 129 507 3.27e-33 134
MS.gene071460.t1 MTR_8g027775 27.094 406 250 7 24 421 100 467 3.37e-33 134
MS.gene071460.t1 MTR_2g043360 27.651 481 256 19 26 449 41 486 7.19e-33 133
MS.gene071460.t1 MTR_4g079320 26.817 399 243 10 26 422 19 370 2.06e-32 133
MS.gene071460.t1 MTR_4g068990 26.540 422 241 12 27 430 69 439 2.52e-32 132
MS.gene071460.t1 MTR_5g027840 27.423 423 251 10 2 413 75 452 1.52e-31 129
MS.gene071460.t1 MTR_5g092560 26.108 406 248 9 31 430 81 440 2.39e-31 129
MS.gene071460.t1 MTR_8g097000 26.988 415 253 10 27 431 289 663 5.00e-31 129
MS.gene071460.t1 MTR_8g027780 26.355 406 253 7 24 421 104 471 6.77e-31 127
MS.gene071460.t1 MTR_2g055850 26.329 395 224 10 26 407 91 431 1.09e-29 123
MS.gene071460.t1 MTR_5g069330 27.896 423 236 15 22 433 3 367 5.80e-29 119
MS.gene071460.t1 MTR_6g033070 25.854 410 249 12 26 428 140 501 1.50e-28 120
MS.gene071460.t1 MTR_5g069330 27.857 420 234 15 25 433 2 363 2.24e-28 117
MS.gene071460.t1 MTR_6g056080 27.083 384 228 9 40 416 117 455 5.78e-28 119
MS.gene071460.t1 MTR_2g063080 25.280 447 246 8 25 422 108 515 9.57e-28 117
MS.gene071460.t1 MTR_3g467550 26.190 378 222 6 26 392 117 448 1.10e-27 116
MS.gene071460.t1 MTR_3g118120 25.791 411 232 13 25 407 131 496 1.79e-26 114
MS.gene071460.t1 MTR_1g102410 25.986 431 233 13 18 416 36 412 4.67e-26 113
MS.gene071460.t1 MTR_3g107420 25.057 439 257 12 4 430 28 406 1.33e-25 110
MS.gene071460.t1 MTR_1g012420 24.263 441 262 12 2 430 26 406 5.28e-25 108
MS.gene071460.t1 MTR_8g027780 27.385 325 223 6 24 340 104 423 8.43e-25 108
MS.gene071460.t1 MTR_4g112340 22.703 370 246 5 38 407 109 438 9.48e-25 108
MS.gene071460.t1 MTR_4g010565 25.185 405 235 10 26 419 124 471 1.87e-24 107
MS.gene071460.t1 MTR_3g071620 25.298 419 240 9 36 429 26 396 6.07e-24 106
MS.gene071460.t1 MTR_0915s0010 28.428 299 196 5 39 337 2 282 8.19e-24 102
MS.gene071460.t1 MTR_4g105100 27.273 319 216 5 25 340 201 506 7.75e-23 102
MS.gene071460.t1 MTR_4g077370 34.951 206 124 4 22 226 246 442 1.17e-22 101
MS.gene071460.t1 MTR_4g077370 33.333 207 108 6 26 230 2 180 5.10e-17 84.3
MS.gene071460.t1 MTR_1g061970 25.176 425 230 16 26 417 80 449 2.54e-22 100
MS.gene071460.t1 MTR_8g079462 28.311 219 116 4 213 428 87 267 1.10e-20 93.6
MS.gene071460.t1 MTR_4g049910 24.574 411 234 11 26 417 55 408 2.65e-20 94.4
MS.gene071460.t1 MTR_8g032230 35.099 151 92 2 18 168 2 146 5.79e-18 82.0
MS.gene071460.t1 MTR_5g092560 26.154 260 146 6 177 430 10 229 6.22e-18 87.4
MS.gene071460.t1 MTR_8g062720 30.319 188 116 4 22 199 87 269 1.16e-17 87.0
MS.gene071460.t1 MTR_4g459350 32.418 182 111 6 26 202 41 215 1.14e-16 80.9
MS.gene071460.t1 MTR_1g046570 22.010 418 246 11 47 431 12 382 9.24e-16 79.7
MS.gene071460.t1 MTR_4g131750 23.077 416 244 12 48 432 104 474 3.08e-15 79.0
MS.gene071460.t1 MTR_8g042690 22.414 406 233 12 38 422 30 374 2.18e-11 66.6
MS.gene071460.t1 MTR_3g107420 26.695 236 145 8 4 230 28 244 5.79e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071460.t1 AT4G34910 68.659 552 162 4 25 566 46 596 0.0 717
MS.gene071460.t1 AT5G60990 29.684 475 272 11 18 484 2 422 1.28e-50 181
MS.gene071460.t1 AT4G16630 32.195 410 231 8 26 433 168 532 1.57e-50 186
MS.gene071460.t1 AT2G47330 29.736 417 244 9 25 437 228 599 2.13e-45 171
MS.gene071460.t1 AT5G26742 29.245 424 248 8 16 433 93 470 1.95e-43 166
MS.gene071460.t1 AT5G26742 29.245 424 248 8 16 433 93 470 1.96e-43 166
MS.gene071460.t1 AT2G33730 28.037 428 243 8 25 432 313 695 3.04e-42 162
MS.gene071460.t1 AT3G01540 29.114 395 228 9 26 416 159 505 3.28e-41 158
MS.gene071460.t1 AT3G01540 29.114 395 228 9 26 416 159 505 3.44e-41 158
MS.gene071460.t1 AT3G01540 29.114 395 228 9 26 416 159 505 3.44e-41 158
MS.gene071460.t1 AT3G01540 29.114 395 228 9 26 416 159 505 3.44e-41 158
MS.gene071460.t1 AT3G22310 27.725 422 241 10 26 437 117 484 5.72e-41 157
MS.gene071460.t1 AT3G22310 27.725 422 241 10 26 437 117 484 6.73e-41 157
MS.gene071460.t1 AT3G22330 27.209 430 248 10 3 421 81 456 7.81e-41 157
MS.gene071460.t1 AT2G40700 28.571 504 267 18 9 449 5 478 3.51e-40 155
MS.gene071460.t1 AT3G09720 30.392 408 219 11 25 422 137 489 5.02e-40 153
MS.gene071460.t1 AT3G09720 30.392 408 219 11 25 422 137 489 5.02e-40 153
MS.gene071460.t1 AT5G26742 29.306 389 222 9 51 433 36 377 1.59e-39 153
MS.gene071460.t1 AT5G14610 28.928 401 221 9 26 416 162 508 1.86e-39 153
MS.gene071460.t1 AT5G14610 28.928 401 221 9 26 416 162 508 2.05e-39 153
MS.gene071460.t1 AT1G16280 28.467 411 244 8 26 433 59 422 2.47e-39 150
MS.gene071460.t1 AT5G14610 28.928 401 221 9 26 416 170 516 2.75e-39 152
MS.gene071460.t1 AT4G00660 27.913 412 241 8 13 421 118 476 4.54e-39 150
MS.gene071460.t1 AT4G00660 27.913 412 241 8 13 421 118 476 4.54e-39 150
MS.gene071460.t1 AT1G20920 26.835 395 248 5 27 421 531 884 1.09e-38 152
MS.gene071460.t1 AT1G20920 26.835 395 248 5 27 421 531 884 1.09e-38 152
MS.gene071460.t1 AT1G20920 26.835 395 248 5 27 421 531 884 1.09e-38 152
MS.gene071460.t1 AT1G20920 26.835 395 248 5 27 421 531 884 1.09e-38 152
MS.gene071460.t1 AT1G20920 26.835 395 248 5 27 421 531 884 1.09e-38 152
MS.gene071460.t1 AT1G20920 26.835 395 248 5 27 421 531 884 1.09e-38 152
MS.gene071460.t1 AT3G06480 29.750 400 231 10 26 422 436 788 1.47e-38 152
MS.gene071460.t1 AT1G20920 26.835 395 248 5 27 421 193 546 2.83e-38 150
MS.gene071460.t1 AT2G45810 28.608 395 231 6 27 421 156 499 4.71e-38 147
MS.gene071460.t1 AT1G55150 26.884 398 240 6 25 418 99 449 2.10e-37 145
MS.gene071460.t1 AT1G55150 26.884 398 240 6 25 418 124 474 1.05e-36 144
MS.gene071460.t1 AT3G61240 27.595 395 235 6 27 421 126 469 1.19e-36 143
MS.gene071460.t1 AT3G61240 27.595 395 235 6 27 421 126 469 1.19e-36 143
MS.gene071460.t1 AT2G42520 27.941 408 235 11 26 418 160 523 1.54e-36 144
MS.gene071460.t1 AT2G42520 27.941 408 235 11 26 418 160 523 1.54e-36 144
MS.gene071460.t1 AT2G42520 27.941 408 235 11 26 418 160 523 1.54e-36 144
MS.gene071460.t1 AT3G13920 27.361 413 245 7 22 431 36 396 2.47e-36 140
MS.gene071460.t1 AT1G54270 27.628 409 241 7 26 431 40 396 4.00e-36 140
MS.gene071460.t1 AT3G13920 27.361 413 245 7 22 431 26 386 4.15e-36 139
MS.gene071460.t1 AT3G09620 27.068 399 213 9 27 421 398 722 6.38e-36 144
MS.gene071460.t1 AT3G09620 27.068 399 213 9 27 421 399 723 6.93e-36 144
MS.gene071460.t1 AT5G14610 28.609 381 208 9 48 418 53 379 8.49e-36 141
MS.gene071460.t1 AT5G14610 28.609 381 208 9 48 418 53 379 8.49e-36 141
MS.gene071460.t1 AT3G13920 27.792 403 236 7 22 421 36 386 9.15e-36 139
MS.gene071460.t1 AT3G13920 27.792 403 236 7 22 421 40 390 1.12e-35 139
MS.gene071460.t1 AT1G31970 29.365 378 217 8 43 413 132 466 2.10e-35 140
MS.gene071460.t1 AT5G14610 28.040 403 221 10 31 418 230 578 2.28e-35 142
MS.gene071460.t1 AT5G63120 26.551 403 235 6 27 420 167 517 5.56e-35 139
MS.gene071460.t1 AT5G51280 27.184 412 239 12 25 424 146 508 5.94e-35 139
MS.gene071460.t1 AT3G19760 24.350 423 264 7 26 448 36 402 8.68e-35 136
MS.gene071460.t1 AT5G65900 28.109 402 235 10 24 419 153 506 9.47e-35 139
MS.gene071460.t1 AT3G13920 27.361 413 240 8 22 431 36 391 9.98e-35 136
MS.gene071460.t1 AT5G08610 26.807 429 268 11 2 421 357 748 1.19e-34 140
MS.gene071460.t1 AT1G54270 27.628 409 236 8 26 431 40 391 1.21e-34 135
MS.gene071460.t1 AT1G72730 26.406 409 246 8 26 431 42 398 3.29e-34 134
MS.gene071460.t1 AT4G33370 27.913 412 230 13 25 421 97 456 2.22e-33 134
MS.gene071460.t1 AT5G08620 26.420 405 248 9 27 421 82 446 6.48e-33 133
MS.gene071460.t1 AT3G58570 26.225 408 242 10 26 418 147 510 1.34e-32 133
MS.gene071460.t1 AT3G58510 26.022 465 260 14 26 476 152 546 4.94e-32 131
MS.gene071460.t1 AT3G58510 26.022 465 260 14 26 476 152 546 4.94e-32 131
MS.gene071460.t1 AT3G58510 26.022 465 260 14 26 476 152 546 4.94e-32 131
MS.gene071460.t1 AT3G16840 24.295 461 251 10 26 425 191 614 1.12e-31 131
MS.gene071460.t1 AT3G16840 24.295 461 251 10 26 425 192 615 1.13e-31 130
MS.gene071460.t1 AT1G77030 27.518 407 228 11 27 422 30 380 1.59e-31 130
MS.gene071460.t1 AT1G51380 24.697 413 254 10 25 433 22 381 4.25e-31 125
MS.gene071460.t1 AT4G09730 28.329 413 236 11 26 422 113 481 5.65e-31 128
MS.gene071460.t1 AT3G18600 26.425 386 233 9 26 407 90 428 2.23e-30 125
MS.gene071460.t1 AT5G63630 25.057 439 255 9 1 421 232 614 7.34e-30 125
MS.gene071460.t1 AT1G12770 26.316 456 229 11 25 422 110 516 1.17e-29 123
MS.gene071460.t1 AT1G12770 26.316 456 229 11 25 422 110 516 1.17e-29 123
MS.gene071460.t1 AT5G63630 24.886 438 257 7 1 421 38 420 1.30e-29 123
MS.gene071460.t1 AT5G14610 29.538 325 198 8 26 340 170 473 2.61e-29 122
MS.gene071460.t1 AT3G02065 25.428 409 253 9 26 428 111 473 2.64e-29 122
MS.gene071460.t1 AT3G02065 25.428 409 253 9 26 428 111 473 2.64e-29 122
MS.gene071460.t1 AT5G54910 24.578 415 252 11 25 429 71 434 4.71e-29 122
MS.gene071460.t1 AT1G28180 26.933 375 223 6 55 425 3 330 1.49e-28 117
MS.gene071460.t1 AT1G63250 24.880 418 259 7 25 429 328 703 5.49e-28 119
MS.gene071460.t1 AT5G62190 26.988 415 229 11 20 416 91 449 1.21e-27 118
MS.gene071460.t1 AT2G07750 25.120 418 258 7 25 429 375 750 1.24e-27 118
MS.gene071460.t1 AT3G06480 30.818 318 203 9 26 340 436 739 1.71e-27 118
MS.gene071460.t1 AT3G06980 25.917 409 233 13 25 407 374 738 2.69e-26 114
MS.gene071460.t1 AT3G53110 25.167 449 264 16 27 453 93 491 2.23e-25 110
MS.gene071460.t1 AT3G02065 24.737 380 234 9 55 428 3 336 4.53e-25 107
MS.gene071460.t1 AT5G11170 24.444 405 238 11 26 419 47 394 8.33e-25 107
MS.gene071460.t1 AT5G11200 24.444 405 238 11 26 419 47 394 8.33e-25 107
MS.gene071460.t1 AT5G63120 27.245 323 207 5 27 340 167 470 8.61e-25 108
MS.gene071460.t1 AT5G63120 27.245 323 207 5 27 340 167 470 8.61e-25 108
MS.gene071460.t1 AT5G63120 27.245 323 207 5 27 340 167 470 8.61e-25 108
MS.gene071460.t1 AT5G63120 27.245 323 207 5 27 340 167 470 8.67e-25 108
MS.gene071460.t1 AT5G05450 25.000 416 250 9 32 429 23 394 2.24e-24 107
MS.gene071460.t1 AT1G71370 24.146 410 264 8 27 429 16 385 8.07e-22 99.8
MS.gene071460.t1 AT5G11200 23.288 438 243 11 26 419 47 435 1.71e-21 98.2
MS.gene071460.t1 AT5G11200 24.368 435 260 18 26 419 47 453 1.66e-19 92.0
MS.gene071460.t1 AT1G51380 25.940 266 179 7 25 289 22 270 3.12e-19 88.6
MS.gene071460.t1 AT1G71280 31.308 214 131 5 27 236 17 218 1.81e-16 82.8
MS.gene071460.t1 AT1G51380 27.523 218 146 6 25 241 22 228 1.99e-16 80.9
MS.gene071460.t1 AT1G51380 27.523 218 146 6 25 241 22 228 2.85e-16 80.5
MS.gene071460.t1 AT1G71280 31.336 217 127 7 27 236 17 218 4.47e-16 80.1
MS.gene071460.t1 AT5G19210 23.969 388 214 13 48 406 99 434 2.38e-15 79.3
MS.gene071460.t1 AT1G59990 30.481 187 116 2 22 199 77 258 4.17e-15 79.0
MS.gene071460.t1 AT1G59990 30.481 187 116 2 22 199 77 258 5.44e-15 78.6

Find 127 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTGATGGCCATCTCTGC+TGG 0.215369 1.4:+67227705 MS.gene071460:CDS
AAGAAGACACTGGCAACTTC+TGG 0.263713 1.4:-67223542 None:intergenic
TGAATATCAGAACTTTCTTT+TGG 0.268968 1.4:-67224456 None:intergenic
TTTCAGATTGAAACTATTCT+TGG 0.271547 1.4:+67224498 MS.gene071460:CDS
AGTTTCAAGAGAACCATTAA+TGG 0.277015 1.4:-67222769 None:intergenic
CTTCAGGCAGCATCCATTAA+TGG 0.291130 1.4:+67222756 MS.gene071460:CDS
TGTGGTTTCGTTCGCGTTTA+CGG 0.312496 1.4:-67221543 None:intergenic
CTAAAATTAGATTCTGAATT+CGG 0.328738 1.4:+67225748 MS.gene071460:CDS
AGTTTCTTCCTATCAACATT+AGG 0.332535 1.4:-67221794 None:intergenic
CAGTTGAATCTTTACGGTAT+AGG 0.338628 1.4:+67226372 MS.gene071460:CDS
TCCTTACGGTTTCCCACTTC+AGG 0.340083 1.4:-67224059 None:intergenic
GCTCGTGCGAAAACCGGTTC+TGG 0.341119 1.4:+67221725 MS.gene071460:CDS
AATTACATACCTCAAGAATA+TGG 0.342339 1.4:-67225191 None:intergenic
GGAATCGCAACGTGCTGAAT+TGG 0.348704 1.4:-67221674 None:intergenic
TGCAGCAAGCAGCACTGGTT+GGG 0.349074 1.4:+67222673 MS.gene071460:intron
ATTATTTCCCATTGCATCTC+TGG 0.349578 1.4:-67227637 None:intergenic
AAATTTCATTCCTCAAATCC+TGG 0.357679 1.4:-67227230 None:intergenic
CTCTGATGGCCATCTCTGCT+GGG 0.362231 1.4:+67227706 MS.gene071460:CDS
TCGCAATTAGATAATCAAAT+AGG 0.362937 1.4:-67225642 None:intergenic
AACTGCACTCTTGGTGAGTA+AGG 0.367677 1.4:-67226354 None:intergenic
GCAGATCTTCTATTATCATA+TGG 0.372693 1.4:+67223481 MS.gene071460:CDS
TTTGTCTAACTCAGTACTTC+AGG 0.376348 1.4:+67222740 MS.gene071460:CDS
CTTCATCCTTCTCCGTTGAC+TGG 0.388679 1.4:-67225675 None:intergenic
AGTTGAATCTTTACGGTATA+GGG 0.391457 1.4:+67226373 MS.gene071460:CDS
TGTTTACTCCTAATGTTGAT+AGG 0.404703 1.4:+67221786 MS.gene071460:CDS
AGAGTGCAGTTGAATCTTTA+CGG 0.420853 1.4:+67226366 MS.gene071460:CDS
GCGATTCCATTGATTCTTGA+AGG 0.422533 1.4:+67221689 MS.gene071460:CDS
AATCCTGGGCTCGTGATTCT+CGG 0.424953 1.4:-67227215 None:intergenic
ACAGGATACGTACATCGAAT+TGG 0.425312 1.4:+67226020 MS.gene071460:CDS
CAGACTAATCCAAGAGACTT+AGG 0.426488 1.4:+67227388 MS.gene071460:CDS
TCAGGCAGAGTCAAGATAAC+GGG 0.428996 1.4:-67224041 None:intergenic
GTCGTTGCTCGTGCGAAAAC+CGG 0.438454 1.4:+67221719 MS.gene071460:CDS
AACCTAGCTCTTCGAAGCTT+CGG 0.438740 1.4:-67221598 None:intergenic
ATAACATTACCTAAGTCTCT+TGG 0.449672 1.4:-67227397 None:intergenic
TTCTGGTACTTCTATCTCCT+TGG 0.454942 1.4:+67226064 MS.gene071460:CDS
ACGGGAAGAGCATACAGTTC+TGG 0.456133 1.4:+67226047 MS.gene071460:CDS
TTGCAGCAAGCAGCACTGGT+TGG 0.456175 1.4:+67222672 MS.gene071460:intron
TCTTTACCTTCAAGAATCAA+TGG 0.459425 1.4:-67221695 None:intergenic
TAGGGATGACCTCATCCTTA+CGG 0.460048 1.4:-67224073 None:intergenic
GGTGCAAGAACGAAAACATT+AGG 0.462500 1.4:-67221821 None:intergenic
TAAAGATTCAACTGCACTCT+TGG 0.463233 1.4:-67226363 None:intergenic
ATTCTGAATTCGGAGTAGTA+AGG 0.464569 1.4:+67225758 MS.gene071460:CDS
GCACCTAAGGAAAATATTGT+TGG 0.467384 1.4:+67225697 MS.gene071460:CDS
TACGTATCCTGTCACACTGC+GGG 0.472114 1.4:-67226009 None:intergenic
AATCACGAGCCCAGGATTTG+AGG 0.472222 1.4:+67227220 MS.gene071460:CDS
CAATATGCTTGCTACTGACT+TGG 0.473105 1.4:+67222033 MS.gene071460:CDS
CGCGTTTACGGTTGCTCCGG+CGG 0.475611 1.4:-67221531 None:intergenic
TCCAAGAGAAAATCAAGAAA+AGG 0.478895 1.4:+67227675 MS.gene071460:CDS
GAAATGCCCCGCAGTGTGAC+AGG 0.481074 1.4:+67226002 MS.gene071460:CDS
CATCCTTGCGATGTTGAAGT+TGG 0.484838 1.4:+67224426 MS.gene071460:CDS
CAGATCTTCTATTATCATAT+GGG 0.489340 1.4:+67223482 MS.gene071460:CDS
GATGTAGAGCAACTTATCAT+TGG 0.489837 1.4:-67224407 None:intergenic
GAGTCGTGAACTATGTCAAC+AGG 0.494125 1.4:+67221844 MS.gene071460:CDS
TTCTGAATTCGGAGTAGTAA+GGG 0.495213 1.4:+67225759 MS.gene071460:CDS
GTGTTTGCAGCAAGCAGCAC+TGG 0.511131 1.4:+67222668 MS.gene071460:intron
AATAGACAAAACAACAAAAG+AGG 0.511196 1.4:+67227593 MS.gene071460:CDS
AGAAGACACTGGCAACTTCT+GGG 0.513801 1.4:-67223541 None:intergenic
AATTTCATTCCTCAAATCCT+GGG 0.518000 1.4:-67227229 None:intergenic
AAAAGATCTTACTTCTTCAA+AGG 0.519084 1.4:-67226285 None:intergenic
TGCGATGTTGAAGTTGGAGT+TGG 0.522591 1.4:+67224432 MS.gene071460:CDS
ATCTTTACGGTATAGGGCTG+AGG 0.523411 1.4:+67226379 MS.gene071460:CDS
GGATCATACCCCAGCAGAGA+TGG 0.524252 1.4:-67227715 None:intergenic
ATTGAAACTATTCTTGGAGA+AGG 0.526200 1.4:+67224504 MS.gene071460:CDS
GTAAACAGTTTCTGAAGCAA+TGG 0.526610 1.4:-67221770 None:intergenic
CTTGGCTATGCAAGCAGGAG+TGG 0.526639 1.4:-67222715 None:intergenic
TAGAGCAACTTATCATTGGC+AGG 0.531606 1.4:-67224403 None:intergenic
TTTCATCAGGAATTCAATGC+CGG 0.531649 1.4:+67225619 MS.gene071460:intron
GTTCGCGTTTACGGTTGCTC+CGG 0.534237 1.4:-67221534 None:intergenic
GGGAAATAATAATCACCGAC+GGG 0.535938 1.4:+67227650 MS.gene071460:CDS
GTAGGTTTCTACAGATGAGA+TGG 0.540473 1.4:+67226259 MS.gene071460:intron
TAAGCTTACCAGAGATGCAA+TGG 0.542536 1.4:+67227629 MS.gene071460:CDS
TTCTTATGTCTGCAACATCA+AGG 0.543076 1.4:+67223560 MS.gene071460:CDS
GGAGTGGAGATTAAAACATC+GGG 0.547109 1.4:-67222699 None:intergenic
CAAAACAACAAAAGAGGCAA+GGG 0.551778 1.4:+67227599 MS.gene071460:CDS
GCCTGAAGTGGGAAACCGTA+AGG 0.554707 1.4:+67224058 MS.gene071460:CDS
ACATCGCAAAGGTGTGGAGG+AGG 0.555139 1.4:-67227558 None:intergenic
AACAAAAGAGGCAAGGGCAA+TGG 0.555238 1.4:+67227605 MS.gene071460:CDS
TTCAGGCAGAGTCAAGATAA+CGG 0.557307 1.4:-67224042 None:intergenic
TATCTTGACTCTGCCTGAAG+TGG 0.559784 1.4:+67224046 MS.gene071460:CDS
GGAGAAGGATGAAGCACCTA+AGG 0.564618 1.4:+67225684 MS.gene071460:CDS
TTCCCGTCTCCATATTCTTG+AGG 0.564842 1.4:+67225182 MS.gene071460:CDS
AAACACTTGGCTATGCAAGC+AGG 0.568069 1.4:-67222720 None:intergenic
TTCAACTGCACAACTTTGAG+CGG 0.568598 1.4:-67222007 None:intergenic
CCGCAACCAGTAATGGCCGC+CGG 0.569759 1.4:+67221515 None:intergenic
TTGTTCTGTGTGCTCACGTG+TGG 0.571100 1.4:-67221561 None:intergenic
TATCAGCCAGTCAACGGAGA+AGG 0.571214 1.4:+67225669 MS.gene071460:CDS
AGTGGGAAACCGTAAGGATG+AGG 0.579561 1.4:+67224064 MS.gene071460:CDS
AAGCTTACCAGAGATGCAAT+GGG 0.579573 1.4:+67227630 MS.gene071460:CDS
GCAACGTGCTGAATTGGAGT+AGG 0.579592 1.4:-67221668 None:intergenic
AAAAGGCAGTGACCCTCTGA+TGG 0.584949 1.4:+67227692 MS.gene071460:CDS
GTACATCGAATTGGACGTAC+GGG 0.585498 1.4:+67226029 MS.gene071460:CDS
TGTCCGAGAATCACGAGCCC+AGG 0.588508 1.4:+67227212 MS.gene071460:CDS
GCGGAACTTTGCATAGCTCA+AGG 0.591214 1.4:-67221988 None:intergenic
ACAAAACAACAAAAGAGGCA+AGG 0.591460 1.4:+67227598 MS.gene071460:CDS
TACCTCAAGAATATGGAGAC+GGG 0.591564 1.4:-67225184 None:intergenic
ATCTTGACTCTGCCTGAAGT+GGG 0.591582 1.4:+67224047 MS.gene071460:CDS
AGGAGTGGAGATTAAAACAT+CGG 0.592149 1.4:-67222700 None:intergenic
ATTCTAGTTTGGGATCAAGT+CGG 0.592413 1.4:+67225131 MS.gene071460:intron
CAGCAGAGATGGCCATCAGA+GGG 0.596159 1.4:-67227704 None:intergenic
GACAGATATCAGCCAGTCAA+CGG 0.597178 1.4:+67225663 MS.gene071460:CDS
CGTACATCGAATTGGACGTA+CGG 0.597566 1.4:+67226028 MS.gene071460:CDS
TGGCAACTTCTGGGTATGTG+TGG 0.598594 1.4:-67223532 None:intergenic
ACTGCACTCTTGGTGAGTAA+GGG 0.600084 1.4:-67226353 None:intergenic
TACTGAGTTAGACAAACACT+TGG 0.600301 1.4:-67222733 None:intergenic
CACAGAACAAGAAGTAGACG+AGG 0.606070 1.4:+67221574 MS.gene071460:CDS
TCTGGGACATCGCAAAGGTG+TGG 0.611172 1.4:-67227564 None:intergenic
GTTGGGGACAATGAAAACAA+TGG 0.611219 1.4:+67226308 MS.gene071460:CDS
AATTAGATAATCAAATAGGC+CGG 0.612982 1.4:-67225638 None:intergenic
GACCGAAGCTTCGAAGAGCT+AGG 0.613429 1.4:+67221596 MS.gene071460:CDS
ACTCCAACTTCAACATCGCA+AGG 0.621489 1.4:-67224429 None:intergenic
TGGGAAATAATAATCACCGA+CGG 0.622669 1.4:+67227649 MS.gene071460:CDS
TCTGATGGCCATCTCTGCTG+GGG 0.623283 1.4:+67227707 MS.gene071460:CDS
CCAGCAGAGATGGCCATCAG+AGG 0.626747 1.4:-67227705 None:intergenic
GGGACATCGCAAAGGTGTGG+AGG 0.629288 1.4:-67227561 None:intergenic
TGAAACTCTAGTTCTTGATG+AGG 0.636636 1.4:+67222785 MS.gene071460:CDS
ATACCTCAAGAATATGGAGA+CGG 0.637365 1.4:-67225185 None:intergenic
GCAAAGGTGTGGAGGAGGAG+CGG 0.643144 1.4:-67227553 None:intergenic
TCTGAATTCGGAGTAGTAAG+GGG 0.647959 1.4:+67225760 MS.gene071460:CDS
GGTAATCTGGGACATCGCAA+AGG 0.648080 1.4:-67227569 None:intergenic
ATATGGAGACGGGAATTCTG+AGG 0.653312 1.4:-67225174 None:intergenic
TGTTGACATAGTTCACGACT+CGG 0.662274 1.4:-67221842 None:intergenic
GTGGAGATTAAAACATCGGG+AGG 0.679011 1.4:-67222696 None:intergenic
TTGCAGACATAAGAAGACAC+TGG 0.684106 1.4:-67223552 None:intergenic
CAGGCAGAGTCAAGATAACG+GGG 0.698716 1.4:-67224040 None:intergenic
ACGTATCCTGTCACACTGCG+GGG 0.709245 1.4:-67226008 None:intergenic
GTACGTATCCTGTCACACTG+CGG 0.709671 1.4:-67226010 None:intergenic
GGAAATAATAATCACCGACG+GGG 0.733097 1.4:+67227651 MS.gene071460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATAAAATAAAAA+GGG - chr1.4:67223604-67223623 None:intergenic 0.0%
!! TATATATATATAAAATAAAA+AGG - chr1.4:67223605-67223624 None:intergenic 0.0%
!! ATAAAAATATTCAAAGAAAA+TGG - chr1.4:67224371-67224390 None:intergenic 10.0%
!! ATAATTAATTGAAAATTAGA+TGG + chr1.4:67225452-67225471 MS.gene071460:intron 10.0%
!! CTATATGATAAAAAAAAAAT+AGG + chr1.4:67226790-67226809 MS.gene071460:intron 10.0%
!!! CTTTTAAATTTTTATAATGT+TGG + chr1.4:67222969-67222988 MS.gene071460:intron 10.0%
!!! TAATTTCATTTTTAAACTAA+AGG - chr1.4:67226506-67226525 None:intergenic 10.0%
!!! TTAATATATAGATGATATTT+TGG + chr1.4:67227111-67227130 MS.gene071460:intron 10.0%
!! AAGTATTCTATAAAAAAACT+TGG - chr1.4:67225406-67225425 None:intergenic 15.0%
!! TGATAAAAAAAAAATAGGAA+CGG + chr1.4:67226795-67226814 MS.gene071460:intron 15.0%
!! TTAAAGATTATATTACTAAG+TGG + chr1.4:67224607-67224626 MS.gene071460:intron 15.0%
!! TTATATTTGTATCATTTGAT+TGG + chr1.4:67222857-67222876 MS.gene071460:intron 15.0%
!!! AAAAGTTAAATTTTATCACA+TGG + chr1.4:67224668-67224687 MS.gene071460:intron 15.0%
!!! AAGAAGTAACATTAATTTTT+TGG - chr1.4:67222888-67222907 None:intergenic 15.0%
!!! AATTTTCAATTAATTATGCT+TGG - chr1.4:67225449-67225468 None:intergenic 15.0%
!!! ATGTTGGTTAATTTTAATTT+TGG + chr1.4:67222985-67223004 MS.gene071460:intron 15.0%
!!! ATTCTATTTGTTTTAGAATA+TGG + chr1.4:67222615-67222634 MS.gene071460:intron 15.0%
!!! TAACTTTTATTACAAAGAAT+GGG - chr1.4:67224656-67224675 None:intergenic 15.0%
!!! TGCAAAAAATATTCTAAAAA+TGG + chr1.4:67222195-67222214 MS.gene071460:intron 15.0%
!!! TTAACTTTTATTACAAAGAA+TGG - chr1.4:67224657-67224676 None:intergenic 15.0%
!! AAAAAATAACTGAAAAGACA+TGG - chr1.4:67227092-67227111 None:intergenic 20.0%
!! AAACTTCACTCAAATTATTT+GGG + chr1.4:67223313-67223332 MS.gene071460:intron 20.0%
!! AACAAACATTGGATTATTAT+AGG + chr1.4:67226905-67226924 MS.gene071460:intron 20.0%
!! AATACTTTGCAAAATTTACT+TGG - chr1.4:67226138-67226157 None:intergenic 20.0%
!! ACAAACATTGGATTATTATA+GGG + chr1.4:67226906-67226925 MS.gene071460:intron 20.0%
!! AGAAATGCAAAATATCAATT+TGG - chr1.4:67222253-67222272 None:intergenic 20.0%
!! ATAAACATTTAATAGAAAGC+TGG + chr1.4:67222515-67222534 MS.gene071460:intron 20.0%
!! ATAATTAGAGTTGTATACTA+TGG + chr1.4:67225872-67225891 MS.gene071460:intron 20.0%
!! ATCAACTATAAAGAAATGAT+GGG - chr1.4:67223771-67223790 None:intergenic 20.0%
!! ATTGTTACTGTATGTAAATT+TGG + chr1.4:67227430-67227449 MS.gene071460:intron 20.0%
!! CTAAAATTAGATTCTGAATT+CGG + chr1.4:67225748-67225767 MS.gene071460:CDS 20.0%
!! TAAACTTCACTCAAATTATT+TGG + chr1.4:67223312-67223331 MS.gene071460:intron 20.0%
!! TACTAAACTAAACAAACAAT+AGG - chr1.4:67222825-67222844 None:intergenic 20.0%
!! TATCAACTATAAAGAAATGA+TGG - chr1.4:67223772-67223791 None:intergenic 20.0%
!! TATGATATAACATGTAAGAT+TGG - chr1.4:67224803-67224822 None:intergenic 20.0%
!! TATTGTATCATATCTTTCTT+TGG + chr1.4:67224202-67224221 MS.gene071460:intron 20.0%
!! TGATATTGTAATGTTAATTG+CGG + chr1.4:67224150-67224169 MS.gene071460:intron 20.0%
!! TTGATATCCAAATTATTGTT+GGG + chr1.4:67222928-67222947 MS.gene071460:intron 20.0%
!! TTGGTAAATAATAGAAAAGA+AGG - chr1.4:67224277-67224296 None:intergenic 20.0%
!! TTGTGTAATATACTTTCTAT+CGG + chr1.4:67223845-67223864 MS.gene071460:intron 20.0%
!!! ATGAATTTTATGTCAAAACA+AGG + chr1.4:67223159-67223178 MS.gene071460:intron 20.0%
!!! ATGTAATGAAGATTTTTAAG+TGG + chr1.4:67223204-67223223 MS.gene071460:intron 20.0%
!!! ATTCATATCTTTGTTTCATT+GGG + chr1.4:67225911-67225930 MS.gene071460:intron 20.0%
!!! CTGTTATGTGATATTATTTT+AGG + chr1.4:67223915-67223934 MS.gene071460:intron 20.0%
!!! GAAAAATGAAAGAAGTATAT+TGG - chr1.4:67224296-67224315 None:intergenic 20.0%
!!! GAAATATTAGGAGAAATTTT+TGG + chr1.4:67225297-67225316 MS.gene071460:intron 20.0%
!!! TATAAGTTTGTTTAGTTACA+TGG + chr1.4:67222372-67222391 MS.gene071460:intron 20.0%
!!! TTTCTTAAGTTCAAAACTTT+TGG - chr1.4:67223185-67223204 None:intergenic 20.0%
!!! TTTGATTTTTCAGATATATG+TGG + chr1.4:67221952-67221971 MS.gene071460:intron 20.0%
! AAAACTATAAATGTTCAGAC+TGG - chr1.4:67225044-67225063 None:intergenic 25.0%
! AAAAGATCTTACTTCTTCAA+AGG - chr1.4:67226288-67226307 None:intergenic 25.0%
! AACTTCACTCAAATTATTTG+GGG + chr1.4:67223314-67223333 MS.gene071460:intron 25.0%
! AACTTCTTCAAACATGAAAA+AGG - chr1.4:67227468-67227487 None:intergenic 25.0%
! AAGAAATTAGAAACAGAAAC+AGG + chr1.4:67223794-67223813 MS.gene071460:intron 25.0%
! AATAGACAAAACAACAAAAG+AGG + chr1.4:67227593-67227612 MS.gene071460:CDS 25.0%
! AATATACCAAAAGAACAACA+CGG - chr1.4:67226189-67226208 None:intergenic 25.0%
! AATCTCAAGCTGTTAAATAT+AGG - chr1.4:67224716-67224735 None:intergenic 25.0%
! AATCTTTAATATCATGCCAT+TGG - chr1.4:67224596-67224615 None:intergenic 25.0%
! AATTACATACCTCAAGAATA+TGG - chr1.4:67225194-67225213 None:intergenic 25.0%
! AATTAGATAATCAAATAGGC+CGG - chr1.4:67225641-67225660 None:intergenic 25.0%
! AGATGCTTTGTAATATAATG+TGG + chr1.4:67223687-67223706 MS.gene071460:intron 25.0%
! ATATAACATGTAAGATTGGA+TGG - chr1.4:67224799-67224818 None:intergenic 25.0%
! ATCTACTACATGAACTATAA+AGG - chr1.4:67222432-67222451 None:intergenic 25.0%
! CACATTGAATTAACAAACAT+TGG + chr1.4:67226894-67226913 MS.gene071460:intron 25.0%
! CAGATCTTCTATTATCATAT+GGG + chr1.4:67223482-67223501 MS.gene071460:CDS 25.0%
! CATAAAACCCAACAATAATT+TGG - chr1.4:67222938-67222957 None:intergenic 25.0%
! CTATAATACCAAAAGAAAGA+CGG - chr1.4:67225227-67225246 None:intergenic 25.0%
! CTGCTCAAATAAAATTTCAA+AGG - chr1.4:67227500-67227519 None:intergenic 25.0%
! CTTGATATCCAAATTATTGT+TGG + chr1.4:67222927-67222946 MS.gene071460:intron 25.0%
! GTAAATAATAGAAAAGAAGG+CGG - chr1.4:67224274-67224293 None:intergenic 25.0%
! GTTAAATATAGGTTCTTGAA+TGG - chr1.4:67224705-67224724 None:intergenic 25.0%
! TAAAAATGTTCAGCAATTCT+GGG + chr1.4:67224094-67224113 MS.gene071460:CDS 25.0%
! TCGCAATTAGATAATCAAAT+AGG - chr1.4:67225645-67225664 None:intergenic 25.0%
! TCTACTACATGAACTATAAA+GGG - chr1.4:67222431-67222450 None:intergenic 25.0%
! TCTTAAATGTAGATCGAATT+AGG + chr1.4:67222154-67222173 MS.gene071460:intron 25.0%
! TGACTTCAAAAATGTATACA+CGG + chr1.4:67225786-67225805 MS.gene071460:CDS 25.0%
! TGCGTAAATATTAGATTTAG+AGG + chr1.4:67222489-67222508 MS.gene071460:intron 25.0%
! TTATCTCTGTAAAATTGTAC+TGG + chr1.4:67223876-67223895 MS.gene071460:intron 25.0%
! TTGTTAGAAACAATTGCAAA+TGG - chr1.4:67223964-67223983 None:intergenic 25.0%
! TTTCAATTAATTATGCTTGG+AGG - chr1.4:67225446-67225465 None:intergenic 25.0%
! TTTCAGATTGAAACTATTCT+TGG + chr1.4:67224498-67224517 MS.gene071460:CDS 25.0%
!! AAGAAGTAAGATCTTTTGTT+GGG + chr1.4:67226291-67226310 MS.gene071460:CDS 25.0%
!! AGAATTGCTGAACATTTTTA+GGG - chr1.4:67224094-67224113 None:intergenic 25.0%
!! ATAGAAACATGATGACATTT+TGG - chr1.4:67225379-67225398 None:intergenic 25.0%
!! ATTTTGAGCAGACATATTTA+AGG - chr1.4:67224947-67224966 None:intergenic 25.0%
!! CTTAGATTAGCTATAATAGA+GGG + chr1.4:67223346-67223365 MS.gene071460:intron 25.0%
!! CTTATCAATGATTTTATGTC+TGG - chr1.4:67224536-67224555 None:intergenic 25.0%
!! GATTCATATCTTTGTTTCAT+TGG + chr1.4:67225910-67225929 MS.gene071460:intron 25.0%
!! GTATCCAAAATAATCTTTTC+AGG + chr1.4:67223459-67223478 MS.gene071460:intron 25.0%
!! TAAGATTTAAAATGTTCTCC+CGG - chr1.4:67222139-67222158 None:intergenic 25.0%
!! TAATACACTCTCAAACATTT+TGG - chr1.4:67223140-67223159 None:intergenic 25.0%
!! TATTTAACAGCTTGAGATTT+TGG + chr1.4:67224717-67224736 MS.gene071460:intron 25.0%
!! TCTTAGATTAGCTATAATAG+AGG + chr1.4:67223345-67223364 MS.gene071460:intron 25.0%
!! TGAATATCAGAACTTTCTTT+TGG - chr1.4:67224459-67224478 None:intergenic 25.0%
!! TGACTAAACACAAACTTTTA+AGG - chr1.4:67226984-67227003 None:intergenic 25.0%
!! TTATAGCTAATCTAAGATTC+AGG - chr1.4:67223342-67223361 None:intergenic 25.0%
!! TTTTGGATAGAAAATCAAAC+TGG - chr1.4:67223123-67223142 None:intergenic 25.0%
!! TTTTGTCTATTAGGTAATCT+GGG - chr1.4:67227584-67227603 None:intergenic 25.0%
!!! AATGAAGATTTTTAAGTGGA+AGG + chr1.4:67223208-67223227 MS.gene071460:intron 25.0%
!!! AATTTTTGGAGATTTTGGTT+TGG + chr1.4:67225311-67225330 MS.gene071460:intron 25.0%
!!! ATATTTTTGTTGAGAGTATG+GGG - chr1.4:67226417-67226436 None:intergenic 25.0%
!!! ATGGATTAGAAGATGAAAAA+AGG - chr1.4:67227323-67227342 None:intergenic 25.0%
!!! CATTTTTCGTTTTTTTTTCC+TGG + chr1.4:67224308-67224327 MS.gene071460:intron 25.0%
!!! CTTTTGTTGTTTTGTCTATT+AGG - chr1.4:67227593-67227612 None:intergenic 25.0%
!!! GATATTTTTGTTGAGAGTAT+GGG - chr1.4:67226418-67226437 None:intergenic 25.0%
!!! GTTATCCTATTTTGTTTTTG+AGG + chr1.4:67226745-67226764 MS.gene071460:intron 25.0%
!!! TGATATTTTTGTTGAGAGTA+TGG - chr1.4:67226419-67226438 None:intergenic 25.0%
AAAATGGAAAAACAAAGGTG+TGG - chr1.4:67227350-67227369 None:intergenic 30.0%
AAATCATTCAAAGCTCTCAT+TGG - chr1.4:67226454-67226473 None:intergenic 30.0%
AAATTTCATTCCTCAAATCC+TGG - chr1.4:67227233-67227252 None:intergenic 30.0%
AATTTCATTCCTCAAATCCT+GGG - chr1.4:67227232-67227251 None:intergenic 30.0%
ACATTTAATAGAAAGCTGGA+AGG + chr1.4:67222519-67222538 MS.gene071460:intron 30.0%
ACTTTGCAAAATTTACTTGG+TGG - chr1.4:67226135-67226154 None:intergenic 30.0%
AGAGACTTAGGTAATGTTAT+TGG + chr1.4:67227400-67227419 MS.gene071460:intron 30.0%
AGCCTAAAATGGAAAAACAA+AGG - chr1.4:67227355-67227374 None:intergenic 30.0%
AGTTGAATCTTTACGGTATA+GGG + chr1.4:67226373-67226392 MS.gene071460:CDS 30.0%
AGTTTCAAGAGAACCATTAA+TGG - chr1.4:67222772-67222791 None:intergenic 30.0%
AGTTTCTTCCTATCAACATT+AGG - chr1.4:67221797-67221816 None:intergenic 30.0%
ATAACATTACCTAAGTCTCT+TGG - chr1.4:67227400-67227419 None:intergenic 30.0%
ATAATGTGTGTGCATTAGAT+AGG - chr1.4:67226716-67226735 None:intergenic 30.0%
ATACAGATAAGAATAGGAAC+GGG + chr1.4:67226582-67226601 MS.gene071460:intron 30.0%
ATGAGAGAAGATAGATCAAT+TGG - chr1.4:67226943-67226962 None:intergenic 30.0%
ATTGAAACTATTCTTGGAGA+AGG + chr1.4:67224504-67224523 MS.gene071460:CDS 30.0%
ATTTAATAGAAAGCTGGAAG+GGG + chr1.4:67222521-67222540 MS.gene071460:intron 30.0%
CAAAGATTAGAAAATGAGAG+AGG - chr1.4:67225100-67225119 None:intergenic 30.0%
CATTTAATAGAAAGCTGGAA+GGG + chr1.4:67222520-67222539 MS.gene071460:intron 30.0%
CTAAAAATGTTCAGCAATTC+TGG + chr1.4:67224093-67224112 MS.gene071460:CDS 30.0%
CTACTACATGAACTATAAAG+GGG - chr1.4:67222430-67222449 None:intergenic 30.0%
CTATACTGCATCAGTTTAAT+GGG + chr1.4:67224877-67224896 MS.gene071460:intron 30.0%
GATACAGATAAGAATAGGAA+CGG + chr1.4:67226581-67226600 MS.gene071460:intron 30.0%
GATCCCAAATATAGAAAAGA+AGG - chr1.4:67224241-67224260 None:intergenic 30.0%
GATGAAAACAAAATAACCTC+AGG - chr1.4:67225070-67225089 None:intergenic 30.0%
GCAGATCTTCTATTATCATA+TGG + chr1.4:67223481-67223500 MS.gene071460:CDS 30.0%
GGGAAAGAAGATAAAAATGA+AGG - chr1.4:67222410-67222429 None:intergenic 30.0%
GTAAATGATTTCAGTGAACA+TGG - chr1.4:67225943-67225962 None:intergenic 30.0%
GTTCCTACTAGTGAAATATT+AGG + chr1.4:67225285-67225304 MS.gene071460:intron 30.0%
TATGTCTGCTCAAAATGATT+TGG + chr1.4:67224951-67224970 MS.gene071460:intron 30.0%
TCCAAGAGAAAATCAAGAAA+AGG + chr1.4:67227675-67227694 MS.gene071460:CDS 30.0%
TCTATACTGCATCAGTTTAA+TGG + chr1.4:67224876-67224895 MS.gene071460:intron 30.0%
TCTCCTAATATTTCACTAGT+AGG - chr1.4:67225291-67225310 None:intergenic 30.0%
TCTTTACCTTCAAGAATCAA+TGG - chr1.4:67221698-67221717 None:intergenic 30.0%
TGACCATTTCTAATCCAAAA+TGG - chr1.4:67222113-67222132 None:intergenic 30.0%
TGAGCATAGAAATTGAAACA+GGG - chr1.4:67221877-67221896 None:intergenic 30.0%
TGTTCAATGTCTACTAGAAT+TGG - chr1.4:67223397-67223416 None:intergenic 30.0%
TGTTTACTCCTAATGTTGAT+AGG + chr1.4:67221786-67221805 MS.gene071460:CDS 30.0%
TTAATTCAATGTGACACGAT+AGG - chr1.4:67226887-67226906 None:intergenic 30.0%
TTGAGCATAGAAATTGAAAC+AGG - chr1.4:67221878-67221897 None:intergenic 30.0%
TTGCAAGACATTTAAGTCTA+GGG - chr1.4:67222180-67222199 None:intergenic 30.0%
TTTAAGTGGAAGGAAAATGA+CGG + chr1.4:67223252-67223271 MS.gene071460:intron 30.0%
TTTGCAAGACATTTAAGTCT+AGG - chr1.4:67222181-67222200 None:intergenic 30.0%
TTTGTAATATAATGTGGACG+TGG + chr1.4:67223693-67223712 MS.gene071460:intron 30.0%
TTTGTCTTACAAACTTACCA+AGG - chr1.4:67226084-67226103 None:intergenic 30.0%
! AAACTCTCAAATTCTGCTTT+TGG - chr1.4:67223234-67223253 None:intergenic 30.0%
! ACTTGTTTCCTCATTTTCTT+TGG + chr1.4:67222312-67222331 MS.gene071460:intron 30.0%
! AGAAGTAAGATCTTTTGTTG+GGG + chr1.4:67226292-67226311 MS.gene071460:CDS 30.0%
! CAATACTTTTAAGCCTCATA+CGG + chr1.4:67226546-67226565 MS.gene071460:intron 30.0%
! CAGAATTGCTGAACATTTTT+AGG - chr1.4:67224095-67224114 None:intergenic 30.0%
! GAAGAAGTAAGATCTTTTGT+TGG + chr1.4:67226290-67226309 MS.gene071460:CDS 30.0%
! GATCCAACAATATTTTCCTT+AGG - chr1.4:67225703-67225722 None:intergenic 30.0%
! GTTAACCTATTTTGTGTTTG+AGG + chr1.4:67226666-67226685 MS.gene071460:intron 30.0%
! GTTTTGTCTATTAGGTAATC+TGG - chr1.4:67227585-67227604 None:intergenic 30.0%
! TCTGCCTGAAAAGATTATTT+TGG - chr1.4:67223466-67223485 None:intergenic 30.0%
! TGATCTTTTTGCACTTTTGA+AGG + chr1.4:67223822-67223841 MS.gene071460:intron 30.0%
! TGGTTTGATGATTGTTCTAA+TGG + chr1.4:67222635-67222654 MS.gene071460:intron 30.0%
! TTGATAAGTTTTCACCTAAC+AGG + chr1.4:67224548-67224567 MS.gene071460:intron 30.0%
! TTTTGGTATTATAGCTGCTA+AGG + chr1.4:67225233-67225252 MS.gene071460:intron 30.0%
!! ACACCATTTTGGATTAGAAA+TGG + chr1.4:67222107-67222126 MS.gene071460:intron 30.0%
!! GGAGAAATTTTTGGAGATTT+TGG + chr1.4:67225306-67225325 MS.gene071460:intron 30.0%
!! TTGATGAGCTTATTTTCATC+AGG + chr1.4:67225606-67225625 MS.gene071460:intron 30.0%
!!! ATCCTATTTTGTTTTTGAGG+TGG + chr1.4:67226748-67226767 MS.gene071460:intron 30.0%
!!! ATTTGAGAGTTTTAAGTGGA+AGG + chr1.4:67223242-67223261 MS.gene071460:intron 30.0%
!!! CACCTTTGTTTTTCCATTTT+AGG + chr1.4:67227350-67227369 MS.gene071460:intron 30.0%
!!! CAGAATTTGAGAGTTTTAAG+TGG + chr1.4:67223238-67223257 MS.gene071460:intron 30.0%
!!! TCCTATTTTGTTTTTGAGGT+GGG + chr1.4:67226749-67226768 MS.gene071460:intron 30.0%
AATCCACGTTTAAGAACACA+AGG - chr1.4:67225528-67225547 None:intergenic 35.0%
AATCCTTGTGTTCTTAAACG+TGG + chr1.4:67225522-67225541 MS.gene071460:intron 35.0%
ACAAAACAACAAAAGAGGCA+AGG + chr1.4:67227598-67227617 MS.gene071460:CDS 35.0%
ACAGGAAAAAATGTTGAACC+AGG - chr1.4:67224329-67224348 None:intergenic 35.0%
ACAGGAAAATCTAAATGCCA+AGG - chr1.4:67226233-67226252 None:intergenic 35.0%
ACTATAAATGTTCAGACTGG+TGG - chr1.4:67225041-67225060 None:intergenic 35.0%
AGAGTGCAGTTGAATCTTTA+CGG + chr1.4:67226366-67226385 MS.gene071460:CDS 35.0%
AGCATAACACATTCAATACC+AGG - chr1.4:67227276-67227295 None:intergenic 35.0%
AGGAGTGGAGATTAAAACAT+CGG - chr1.4:67222703-67222722 None:intergenic 35.0%
AGTGGTCAAGAATTTGAACT+TGG + chr1.4:67224625-67224644 MS.gene071460:intron 35.0%
ATACCTCAAGAATATGGAGA+CGG - chr1.4:67225188-67225207 None:intergenic 35.0%
ATCCACCTCAAACACAAAAT+AGG - chr1.4:67226674-67226693 None:intergenic 35.0%
ATTATTTCCCATTGCATCTC+TGG - chr1.4:67227640-67227659 None:intergenic 35.0%
ATTCTGAATTCGGAGTAGTA+AGG + chr1.4:67225758-67225777 MS.gene071460:CDS 35.0%
CAAAACAACAAAAGAGGCAA+GGG + chr1.4:67227599-67227618 MS.gene071460:CDS 35.0%
CAGTTGAATCTTTACGGTAT+AGG + chr1.4:67226372-67226391 MS.gene071460:CDS 35.0%
CCAAACTAGAATGATAGAGA+GGG - chr1.4:67225123-67225142 None:intergenic 35.0%
CCCAAATATAGAAAAGAAGG+CGG - chr1.4:67224238-67224257 None:intergenic 35.0%
CGTTTAAGAACACAAGGATT+TGG - chr1.4:67225522-67225541 None:intergenic 35.0%
GAACGGGTACAAGTTTAATA+TGG + chr1.4:67226598-67226617 MS.gene071460:intron 35.0%
GACAGGATACAGATAAGAAT+AGG + chr1.4:67226576-67226595 MS.gene071460:intron 35.0%
GAGCATAGAAATTGAAACAG+GGG - chr1.4:67221876-67221895 None:intergenic 35.0%
GATGTAGAGCAACTTATCAT+TGG - chr1.4:67224410-67224429 None:intergenic 35.0%
GATTAGAAATGGTCAATACC+GGG + chr1.4:67222118-67222137 MS.gene071460:intron 35.0%
GCACCTAAGGAAAATATTGT+TGG + chr1.4:67225697-67225716 MS.gene071460:CDS 35.0%
GCATAACACATTCAATACCA+GGG - chr1.4:67227275-67227294 None:intergenic 35.0%
GGAACGGTACAAGTTTAATA+TGG + chr1.4:67226811-67226830 MS.gene071460:intron 35.0%
GGATTAGAAATGGTCAATAC+CGG + chr1.4:67222117-67222136 MS.gene071460:intron 35.0%
GTGTGCATTAGATAGGAATA+GGG - chr1.4:67226709-67226728 None:intergenic 35.0%
TAAAGATTCAACTGCACTCT+TGG - chr1.4:67226366-67226385 None:intergenic 35.0%
TACATGTCATACACTGATGT+TGG + chr1.4:67224824-67224843 MS.gene071460:intron 35.0%
TACTGAGTTAGACAAACACT+TGG - chr1.4:67222736-67222755 None:intergenic 35.0%
TGGGAAATAATAATCACCGA+CGG + chr1.4:67227649-67227668 MS.gene071460:CDS 35.0%
TGTGTGCATTAGATAGGAAT+AGG - chr1.4:67226710-67226729 None:intergenic 35.0%
TTCTGAATTCGGAGTAGTAA+GGG + chr1.4:67225759-67225778 MS.gene071460:CDS 35.0%
TTCTTATCTGTATCCTGTCA+TGG - chr1.4:67226575-67226594 None:intergenic 35.0%
TTCTTATGTCTGCAACATCA+AGG + chr1.4:67223560-67223579 MS.gene071460:CDS 35.0%
TTTCATCAGGAATTCAATGC+CGG + chr1.4:67225619-67225638 MS.gene071460:intron 35.0%
TTTGTCTAACTCAGTACTTC+AGG + chr1.4:67222740-67222759 MS.gene071460:CDS 35.0%
! AAATTTACTTGGTGGAGAAG+AGG - chr1.4:67226127-67226146 None:intergenic 35.0%
! AACCTATTTTGTGTTTGAGG+TGG + chr1.4:67226669-67226688 MS.gene071460:intron 35.0%
! ACCGCCTTCTTTTCTATATT+TGG + chr1.4:67224234-67224253 MS.gene071460:intron 35.0%
! AGATTTTCCTGTTTCCTTGT+AGG + chr1.4:67226241-67226260 MS.gene071460:intron 35.0%
! CCGCCTTCTTTTCTATATTT+GGG + chr1.4:67224235-67224254 MS.gene071460:intron 35.0%
! GCCTTTTCTTGATTTTCTCT+TGG - chr1.4:67227679-67227698 None:intergenic 35.0%
! GTTTTTCCATTTTAGGCTGA+CGG + chr1.4:67227357-67227376 MS.gene071460:intron 35.0%
! TAAAAGTGTATCAGCTACAC+AGG - chr1.4:67224347-67224366 None:intergenic 35.0%
!! ATTATGCTTGGAGGTTTTGA+TGG - chr1.4:67225437-67225456 None:intergenic 35.0%
!! ATTCTAGTTTGGGATCAAGT+CGG + chr1.4:67225131-67225150 MS.gene071460:intron 35.0%
!! CATTTATAGTTTTGCACCTG+AGG + chr1.4:67225051-67225070 MS.gene071460:intron 35.0%
!! CCTCTCTATCATTCTAGTTT+GGG + chr1.4:67225121-67225140 MS.gene071460:intron 35.0%
!! CTTTCTGACATGTTTTTGTC+TGG + chr1.4:67225832-67225851 MS.gene071460:intron 35.0%
!! GATGATTGACATTGTTTTGC+AGG + chr1.4:67227161-67227180 MS.gene071460:intron 35.0%
!! GTAAACAGTTTCTGAAGCAA+TGG - chr1.4:67221773-67221792 None:intergenic 35.0%
!! TCTAATCCGTGTTGTTCTTT+TGG + chr1.4:67226180-67226199 MS.gene071460:intron 35.0%
!! TGAAACTCTAGTTCTTGATG+AGG + chr1.4:67222785-67222804 MS.gene071460:CDS 35.0%
!!! CAAACTTTTAAGGCTCTGTT+TGG - chr1.4:67226974-67226993 None:intergenic 35.0%
!!! CCTATTTTGTTTTTGAGGTG+GGG + chr1.4:67226750-67226769 MS.gene071460:intron 35.0%
!!! GATTATTTTGGATACCGATC+AGG - chr1.4:67223454-67223473 None:intergenic 35.0%
AAGCTTACCAGAGATGCAAT+GGG + chr1.4:67227630-67227649 MS.gene071460:CDS 40.0%
AATGCCAAGGTAATGTAGCT+TGG - chr1.4:67226220-67226239 None:intergenic 40.0%
ACAGGATACGTACATCGAAT+TGG + chr1.4:67226020-67226039 MS.gene071460:CDS 40.0%
ACATCCAAGCTACATTACCT+TGG + chr1.4:67226213-67226232 MS.gene071460:intron 40.0%
ACCTAACAGGTTTATGCACT+CGG + chr1.4:67224561-67224580 MS.gene071460:intron 40.0%
ATACTGTGTGCGCATTAGAT+AGG - chr1.4:67226637-67226656 None:intergenic 40.0%
ATATGAACCTACTCAAGTGC+TGG - chr1.4:67222576-67222595 None:intergenic 40.0%
ATGCTGTGTGTGCATTAGAT+AGG - chr1.4:67226850-67226869 None:intergenic 40.0%
CAGACTAATCCAAGAGACTT+AGG + chr1.4:67227388-67227407 MS.gene071460:CDS 40.0%
CCAAAATGGTGTGCTAATCA+TGG - chr1.4:67222099-67222118 None:intergenic 40.0%
CCCAAACTAGAATGATAGAG+AGG - chr1.4:67225124-67225143 None:intergenic 40.0%
CCCCACCTCAAAAACAAAAT+AGG - chr1.4:67226753-67226772 None:intergenic 40.0%
CTCATCTGTAGAAACCTACA+AGG - chr1.4:67226258-67226277 None:intergenic 40.0%
GGAAATAATAATCACCGACG+GGG + chr1.4:67227651-67227670 MS.gene071460:CDS 40.0%
GGAGTGGAGATTAAAACATC+GGG - chr1.4:67222702-67222721 None:intergenic 40.0%
GGGAAATAATAATCACCGAC+GGG + chr1.4:67227650-67227669 MS.gene071460:CDS 40.0%
GGTCATGGAACATAGACAAT+TGG - chr1.4:67223433-67223452 None:intergenic 40.0%
GGTGCAAGAACGAAAACATT+AGG - chr1.4:67221824-67221843 None:intergenic 40.0%
GTAGAAACCTACAAGGAAAC+AGG - chr1.4:67226251-67226270 None:intergenic 40.0%
GTAGGTTTCTACAGATGAGA+TGG + chr1.4:67226259-67226278 MS.gene071460:intron 40.0%
GTTGGGGACAATGAAAACAA+TGG + chr1.4:67226308-67226327 MS.gene071460:CDS 40.0%
TAAGCTTACCAGAGATGCAA+TGG + chr1.4:67227629-67227648 MS.gene071460:CDS 40.0%
TACCAAAAGAAAGACGGAAG+TGG - chr1.4:67225221-67225240 None:intergenic 40.0%
TACCTCAAGAATATGGAGAC+GGG - chr1.4:67225187-67225206 None:intergenic 40.0%
TAGAGCAACTTATCATTGGC+AGG - chr1.4:67224406-67224425 None:intergenic 40.0%
TAGGAACGTGTCATAGAACT+GGG - chr1.4:67225272-67225291 None:intergenic 40.0%
TCTATGTTCCATGACCTGAT+CGG + chr1.4:67223437-67223456 MS.gene071460:intron 40.0%
TCTGAATTCGGAGTAGTAAG+GGG + chr1.4:67225760-67225779 MS.gene071460:CDS 40.0%
TGCTCACTCCAAAGAAAATG+AGG - chr1.4:67222323-67222342 None:intergenic 40.0%
TGTGCGCATTAGATAGGAAT+GGG - chr1.4:67226631-67226650 None:intergenic 40.0%
TGTTGACATAGTTCACGACT+CGG - chr1.4:67221845-67221864 None:intergenic 40.0%
TTCAACTGCACAACTTTGAG+CGG - chr1.4:67222010-67222029 None:intergenic 40.0%
TTCAGGCAGAGTCAAGATAA+CGG - chr1.4:67224045-67224064 None:intergenic 40.0%
TTCTGGTACTTCTATCTCCT+TGG + chr1.4:67226064-67226083 MS.gene071460:CDS 40.0%
TTGCAGACATAAGAAGACAC+TGG - chr1.4:67223555-67223574 None:intergenic 40.0%
! AAAACAAAGGTGTGGAGGAA+TGG - chr1.4:67227342-67227361 None:intergenic 40.0%
! AGCAAATGTTTTGCCAGAAC+CGG - chr1.4:67221741-67221760 None:intergenic 40.0%
! ATCCACTTCCGTCTTTCTTT+TGG + chr1.4:67225216-67225235 MS.gene071460:intron 40.0%
! ATGGAAAAACAAAGGTGTGG+AGG - chr1.4:67227347-67227366 None:intergenic 40.0%
! CAATATGCTTGCTACTGACT+TGG + chr1.4:67222033-67222052 MS.gene071460:CDS 40.0%
! CCATGATTAGCACACCATTT+TGG + chr1.4:67222096-67222115 MS.gene071460:intron 40.0%
! CCCTCTCTATCATTCTAGTT+TGG + chr1.4:67225120-67225139 MS.gene071460:intron 40.0%
!! GCGATTCCATTGATTCTTGA+AGG + chr1.4:67221689-67221708 MS.gene071460:CDS 40.0%
!! TTTGGAGTTTTGCTCAACTC+AGG + chr1.4:67224969-67224988 MS.gene071460:intron 40.0%
AAACACTTGGCTATGCAAGC+AGG - chr1.4:67222723-67222742 None:intergenic 45.0%
AACAAAAGAGGCAAGGGCAA+TGG + chr1.4:67227605-67227624 MS.gene071460:CDS 45.0%
AACTCTGCAAAGTAAGTCCC+TGG + chr1.4:67227255-67227274 MS.gene071460:intron 45.0%
AACTGCACTCTTGGTGAGTA+AGG - chr1.4:67226357-67226376 None:intergenic 45.0%
AAGAAGACACTGGCAACTTC+TGG - chr1.4:67223545-67223564 None:intergenic 45.0%
ACTCCAACTTCAACATCGCA+AGG - chr1.4:67224432-67224451 None:intergenic 45.0%
ACTGCACTCTTGGTGAGTAA+GGG - chr1.4:67226356-67226375 None:intergenic 45.0%
AGAAGACACTGGCAACTTCT+GGG - chr1.4:67223544-67223563 None:intergenic 45.0%
ATATGGAGACGGGAATTCTG+AGG - chr1.4:67225177-67225196 None:intergenic 45.0%
ATCTTGACTCTGCCTGAAGT+GGG + chr1.4:67224047-67224066 MS.gene071460:CDS 45.0%
ATCTTTACGGTATAGGGCTG+AGG + chr1.4:67226379-67226398 MS.gene071460:CDS 45.0%
CACAGAACAAGAAGTAGACG+AGG + chr1.4:67221574-67221593 MS.gene071460:CDS 45.0%
CATCCTTGCGATGTTGAAGT+TGG + chr1.4:67224426-67224445 MS.gene071460:CDS 45.0%
CCTAACAGGTTTATGCACTC+GGG + chr1.4:67224562-67224581 MS.gene071460:intron 45.0%
CGTACATCGAATTGGACGTA+CGG + chr1.4:67226028-67226047 MS.gene071460:CDS 45.0%
CTTCAGGCAGCATCCATTAA+TGG + chr1.4:67222756-67222775 MS.gene071460:CDS 45.0%
GACAGATATCAGCCAGTCAA+CGG + chr1.4:67225663-67225682 MS.gene071460:CDS 45.0%
GAGTCGTGAACTATGTCAAC+AGG + chr1.4:67221844-67221863 MS.gene071460:CDS 45.0%
GCTTTCTCTTGCTGATGAAC+AGG + chr1.4:67225968-67225987 MS.gene071460:intron 45.0%
GTACATCGAATTGGACGTAC+GGG + chr1.4:67226029-67226048 MS.gene071460:CDS 45.0%
GTAGGAACGTGTCATAGAAC+TGG - chr1.4:67225273-67225292 None:intergenic 45.0%
GTGGAGATTAAAACATCGGG+AGG - chr1.4:67222699-67222718 None:intergenic 45.0%
GTGTGCGCATTAGATAGGAA+TGG - chr1.4:67226632-67226651 None:intergenic 45.0%
GTTTATGCACTCGGGATAGT+TGG + chr1.4:67224570-67224589 MS.gene071460:intron 45.0%
TAACTGAGACAGGAACGACA+TGG - chr1.4:67227037-67227056 None:intergenic 45.0%
TAGGGATGACCTCATCCTTA+CGG - chr1.4:67224076-67224095 None:intergenic 45.0%
TATCTTGACTCTGCCTGAAG+TGG + chr1.4:67224046-67224065 MS.gene071460:CDS 45.0%
TCAGGCAGAGTCAAGATAAC+GGG - chr1.4:67224044-67224063 None:intergenic 45.0%
TGCGATGTTGAAGTTGGAGT+TGG + chr1.4:67224432-67224451 MS.gene071460:CDS 45.0%
TGTGGTTTCGTTCGCGTTTA+CGG - chr1.4:67221546-67221565 None:intergenic 45.0%
TTCCCGTCTCCATATTCTTG+AGG + chr1.4:67225182-67225201 MS.gene071460:CDS 45.0%
TTCGCAAGTCTAACTGAGAC+AGG - chr1.4:67227047-67227066 None:intergenic 45.0%
TTTGGATACCGATCAGGTCA+TGG - chr1.4:67223448-67223467 None:intergenic 45.0%
! AACCTAGCTCTTCGAAGCTT+CGG - chr1.4:67221601-67221620 None:intergenic 45.0%
! ATTTTCTCTTGGATCCCCGT+CGG - chr1.4:67227668-67227687 None:intergenic 45.0%
!! AATAAAAATTTAAAAAATTG+AGG - chr1.4:67223736-67223755 None:intergenic 5.0%
AAAAGGCAGTGACCCTCTGA+TGG + chr1.4:67227692-67227711 MS.gene071460:CDS 50.0%
AATCACGAGCCCAGGATTTG+AGG + chr1.4:67227220-67227239 MS.gene071460:CDS 50.0%
AATCCTGGGCTCGTGATTCT+CGG - chr1.4:67227218-67227237 None:intergenic 50.0%
AGTGAGCCGTCAGCCTAAAA+TGG - chr1.4:67227366-67227385 None:intergenic 50.0%
AGTGGGAAACCGTAAGGATG+AGG + chr1.4:67224064-67224083 MS.gene071460:CDS 50.0%
AGTGTCTCCAGCACTTGAGT+AGG + chr1.4:67222566-67222585 MS.gene071460:intron 50.0%
ATAGAAAGCTGGAAGGGGCT+AGG + chr1.4:67222526-67222545 MS.gene071460:intron 50.0%
CAGGCAGAGTCAAGATAACG+GGG - chr1.4:67224043-67224062 None:intergenic 50.0%
CCCGAGTGCATAAACCTGTT+AGG - chr1.4:67224565-67224584 None:intergenic 50.0%
CCTCATACGGTTTCCATGAC+AGG + chr1.4:67226559-67226578 MS.gene071460:intron 50.0%
CCTGTCATGGAAACCGTATG+AGG - chr1.4:67226562-67226581 None:intergenic 50.0%
CTTCATCCTTCTCCGTTGAC+TGG - chr1.4:67225678-67225697 None:intergenic 50.0%
GCAACGTGCTGAATTGGAGT+AGG - chr1.4:67221671-67221690 None:intergenic 50.0%
GCGGAACTTTGCATAGCTCA+AGG - chr1.4:67221991-67222010 None:intergenic 50.0%
GGAATCGCAACGTGCTGAAT+TGG - chr1.4:67221677-67221696 None:intergenic 50.0%
GTACGTATCCTGTCACACTG+CGG - chr1.4:67226013-67226032 None:intergenic 50.0%
TACGTATCCTGTCACACTGC+GGG - chr1.4:67226012-67226031 None:intergenic 50.0%
TAGAAAGCTGGAAGGGGCTA+GGG + chr1.4:67222527-67222546 MS.gene071460:intron 50.0%
TATCAGCCAGTCAACGGAGA+AGG + chr1.4:67225669-67225688 MS.gene071460:CDS 50.0%
TCCTTACGGTTTCCCACTTC+AGG - chr1.4:67224062-67224081 None:intergenic 50.0%
TGGCAACTTCTGGGTATGTG+TGG - chr1.4:67223535-67223554 None:intergenic 50.0%
TTGTTCTGTGTGCTCACGTG+TGG - chr1.4:67221564-67221583 None:intergenic 50.0%
! ACGGGAAGAGCATACAGTTC+TGG + chr1.4:67226047-67226066 MS.gene071460:CDS 50.0%
! GGAGAAGGATGAAGCACCTA+AGG + chr1.4:67225684-67225703 MS.gene071460:CDS 50.0%
! GGTAATCTGGGACATCGCAA+AGG - chr1.4:67227572-67227591 None:intergenic 50.0%
ACGTATCCTGTCACACTGCG+GGG - chr1.4:67226011-67226030 None:intergenic 55.0%
CACTCGGGATAGTTGGCCAA+TGG + chr1.4:67224577-67224596 MS.gene071460:intron 55.0%
CAGCAGAGATGGCCATCAGA+GGG - chr1.4:67227707-67227726 None:intergenic 55.0%
CTCTGATGGCCATCTCTGCT+GGG + chr1.4:67227706-67227725 MS.gene071460:CDS 55.0%
CTTGGCTATGCAAGCAGGAG+TGG - chr1.4:67222718-67222737 None:intergenic 55.0%
GACCGAAGCTTCGAAGAGCT+AGG + chr1.4:67221596-67221615 MS.gene071460:CDS 55.0%
GCCTGAAGTGGGAAACCGTA+AGG + chr1.4:67224058-67224077 MS.gene071460:CDS 55.0%
GTCGTTGCTCGTGCGAAAAC+CGG + chr1.4:67221719-67221738 MS.gene071460:CDS 55.0%
GTGTTTGCAGCAAGCAGCAC+TGG + chr1.4:67222668-67222687 MS.gene071460:intron 55.0%
GTTCGCGTTTACGGTTGCTC+CGG - chr1.4:67221537-67221556 None:intergenic 55.0%
TCAGACTGGTGGAAGCAGTG+TGG - chr1.4:67225030-67225049 None:intergenic 55.0%
TCTGATGGCCATCTCTGCTG+GGG + chr1.4:67227707-67227726 MS.gene071460:CDS 55.0%
TGGTGGAAGCAGTGTGGTTG+AGG - chr1.4:67225024-67225043 None:intergenic 55.0%
! ACATCGCAAAGGTGTGGAGG+AGG - chr1.4:67227561-67227580 None:intergenic 55.0%
! TCTGGGACATCGCAAAGGTG+TGG - chr1.4:67227567-67227586 None:intergenic 55.0%
!! TGCAGCAAGCAGCACTGGTT+GGG + chr1.4:67222673-67222692 MS.gene071460:intron 55.0%
!! TTGCAGCAAGCAGCACTGGT+TGG + chr1.4:67222672-67222691 MS.gene071460:intron 55.0%
CCAGCAGAGATGGCCATCAG+AGG - chr1.4:67227708-67227727 None:intergenic 60.0%
CCTCTGATGGCCATCTCTGC+TGG + chr1.4:67227705-67227724 MS.gene071460:CDS 60.0%
GAAATGCCCCGCAGTGTGAC+AGG + chr1.4:67226002-67226021 MS.gene071460:CDS 60.0%
GAAGGGGCTAGGGTCAGTGT+AGG + chr1.4:67222537-67222556 MS.gene071460:intron 60.0%
TGTCCGAGAATCACGAGCCC+AGG + chr1.4:67227212-67227231 MS.gene071460:CDS 60.0%
! GCAAAGGTGTGGAGGAGGAG+CGG - chr1.4:67227556-67227575 None:intergenic 60.0%
! GCTCGTGCGAAAACCGGTTC+TGG + chr1.4:67221725-67221744 MS.gene071460:CDS 60.0%
! GGGACATCGCAAAGGTGTGG+AGG - chr1.4:67227564-67227583 None:intergenic 60.0%
CGCGTTTACGGTTGCTCCGG+CGG - chr1.4:67221534-67221553 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 67221527 67227734 67221527 ID=MS.gene071460
chr1.4 mRNA 67221527 67227734 67221527 ID=MS.gene071460.t1;Parent=MS.gene071460
chr1.4 exon 67221527 67221865 67221527 ID=MS.gene071460.t1.exon1;Parent=MS.gene071460.t1
chr1.4 CDS 67221527 67221865 67221527 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
chr1.4 exon 67221965 67222054 67221965 ID=MS.gene071460.t1.exon2;Parent=MS.gene071460.t1
chr1.4 CDS 67221965 67222054 67221965 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
chr1.4 exon 67222678 67222806 67222678 ID=MS.gene071460.t1.exon3;Parent=MS.gene071460.t1
chr1.4 CDS 67222678 67222806 67222678 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
chr1.4 exon 67223481 67223581 67223481 ID=MS.gene071460.t1.exon4;Parent=MS.gene071460.t1
chr1.4 CDS 67223481 67223581 67223481 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
chr1.4 exon 67224001 67224115 67224001 ID=MS.gene071460.t1.exon5;Parent=MS.gene071460.t1
chr1.4 CDS 67224001 67224115 67224001 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
chr1.4 exon 67224394 67224525 67224394 ID=MS.gene071460.t1.exon6;Parent=MS.gene071460.t1
chr1.4 CDS 67224394 67224525 67224394 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
chr1.4 exon 67225138 67225203 67225138 ID=MS.gene071460.t1.exon7;Parent=MS.gene071460.t1
chr1.4 CDS 67225138 67225203 67225138 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
chr1.4 exon 67225628 67225807 67225628 ID=MS.gene071460.t1.exon8;Parent=MS.gene071460.t1
chr1.4 CDS 67225628 67225807 67225628 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
chr1.4 exon 67225990 67226085 67225990 ID=MS.gene071460.t1.exon9;Parent=MS.gene071460.t1
chr1.4 CDS 67225990 67226085 67225990 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
chr1.4 exon 67226263 67226400 67226263 ID=MS.gene071460.t1.exon10;Parent=MS.gene071460.t1
chr1.4 CDS 67226263 67226400 67226263 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
chr1.4 exon 67227183 67227265 67227183 ID=MS.gene071460.t1.exon11;Parent=MS.gene071460.t1
chr1.4 CDS 67227183 67227265 67227183 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
chr1.4 exon 67227372 67227409 67227372 ID=MS.gene071460.t1.exon12;Parent=MS.gene071460.t1
chr1.4 CDS 67227372 67227409 67227372 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
chr1.4 exon 67227520 67227734 67227520 ID=MS.gene071460.t1.exon13;Parent=MS.gene071460.t1
chr1.4 CDS 67227520 67227734 67227520 ID=cds.MS.gene071460.t1;Parent=MS.gene071460.t1
Gene Sequence

>MS.gene071460

ATGGCCGCCGGAGCAACCGTAAACGCGAACGAAACCACACGTGAGCACACAGAACAAGAAGTAGACGAGGACCGAAGCTTCGAAGAGCTAGGTTTAGACGCACGTCTCGTTCGCGCTTTACTGAAGAAACGAATTGAGAAACCTACTCCAATTCAGCACGTTGCGATTCCATTGATTCTTGAAGGTAAAGACGTCGTTGCTCGTGCGAAAACCGGTTCTGGCAAAACATTTGCTTATCTTCTTCCATTGCTTCAGAAACTGTTTACTCCTAATGTTGATAGGAAGAAACTAGCTCCTAATGTTTTCGTTCTTGCACCGAGTCGTGAACTATGTCAACAGGTGCATTCCCCTGTTTCAATTTCTATGCTCAATATCTTTTTTTACAGTTGTATATAAATGTATCTATTTCATGTTTTTTGTTGTTATTTGATTTTTCAGATATATGTGGAAGTGAAGTCACTCCTTGAGCTATGCAAAGTTCCGCTCAAAGTTGTGCAGTTGAATAGCAATATGCTTGCTACTGACTTGGTTCGTTATTCTCTTTATGATTTTCGTTGTTGCAATTTATGCCATGATTAGCACACCATTTTGGATTAGAAATGGTCAATACCGGGAGAACATTTTAAATCTTAAATGTAGATCGAATTAGGCCCTAGACTTAAATGTCTTGCAAAAAATATTCTAAAAATGGCTAATTTGACTCACTTTTAAATATCATAAAGACCAAATTGATATTTTGCATTTCTTAGTGAACTGCACATTTCGACTGTGTGCATCAATTAATTACTTGTTTCCTCATTTTCTTTGGAGTGAGCAAGATTTTTTGAGTAAACTCACATGTCATATATAAGTTTGTTTAGTTACATGGCTGTGATAGCTTCCTTCATTTTTATCTTCTTTCCCCTTTATAGTTCATGTAGTAGATTAGATAGTAAGACAAGAATAGAGTTGTATGTGAAACATGCGTAAATATTAGATTTAGAGGCGTATAAACATTTAATAGAAAGCTGGAAGGGGCTAGGGTCAGTGTAGGTATACAAGTGTCTCCAGCACTTGAGTAGGTTCATATATGCATGTCAAAACTATGTATTCTATTTGTTTTAGAATATGGTTTGATGATTGTTCTAATGGTCTAAAATTTGTGTTTGCAGCAAGCAGCACTGGTTGGGCCTCCCGATGTTTTAATCTCCACTCCTGCTTGCATAGCCAAGTGTTTGTCTAACTCAGTACTTCAGGCAGCATCCATTAATGGTTCTCTTGAAACTCTAGTTCTTGATGAGGTGAATCAGATAAAGCCTATTGTTTGTTTAGTTTAGTAAAGTATAATTGTTTATATTTGTATCATTTGATTGGTAAGACCAAAAAATTAATGTTACTTCTTTTCATTAATAGTTACGCTACTTGATATCCAAATTATTGTTGGGTTTTATGTTTTTTTATAGCTTTTAAATTTTTATAATGTTGGTTAATTTTAATTTTGGATTATCTATACTTTTGATTTCTCTAGTTTGAACTAAATGCGATTTTGATAACTCAAGTTTTTTTGAATCAACAACTTTTAGTTATCAAAATCGCGTTAAGTTCAATCACAATCCAGTTTGATTTTCTATCCAAAATGTTTGAGAGTGTATTATGAATTTTATGTCAAAACAAGGCCAAAAGTTTTGAACTTAAGAAATGTAATGAAGATTTTTAAGTGGAAGGCCAAAAGCAGAATTTGAGAGTTTTAAGTGGAAGGAAAATGACGGAGAGATTCAATTACTGACATTAAATTTTTTTAAGAGCTAAACTTCACTCAAATTATTTGGGGTACCTGAATCTTAGATTAGCTATAATAGAGGGACTAAAACTCTTTGATATATTAATGCCAATTCTAGTAGACATTGAACAGTTGTTAATTGTTCCAATTGTCTATGTTCCATGACCTGATCGGTATCCAAAATAATCTTTTCAGGCAGATCTTCTATTATCATATGGGTATGAAAATGACATAAAAGCTTTAACACCACACATACCCAGAAGTTGCCAGTGTCTTCTTATGTCTGCAACATCAAGGTGTGTCATTTGTCTTTCACCCTTTTTATTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATCTTTCTGCTCAGATGCTTTGTAATATAATGTGGACGTGGATGCTACATCTTTCATTCCTCAATTTTTTAAATTTTTATTTAATAGTTTTAGCCCATCATTTCTTTATAGTTGATATTAAGAAATTAGAAACAGAAACAGGCATAATGATCTTTTTGCACTTTTGAAGGTTGTGTAATATACTTTCTATCGGAGAAGTGTTTATCTCTGTAAAATTGTACTGGCTTAGTGTATGAATGACTGTTATGTGATATTATTTTAGGATTAGTCTTTCGTAGAATCATGTCCATTTGCAATTGTTTCTAACAAAATGTTTTCTTTTGCAGTGACGATGTTGACAAACTAAAAAAGTTGATGTTACACAACCCCGTTATCTTGACTCTGCCTGAAGTGGGAAACCGTAAGGATGAGGTCATCCCTAAAAATGTTCAGCAATTCTGGGTAAGACATTCGATAAATTTTCTACACGTCTTCTTGATATTGTAATGTTAATTGCGGTGAAGTTTAAATCTTTATTTTACACAAAATATTGTATCATATCTTTCTTTGGAGACAAGAGACCGCCTTCTTTTCTATATTTGGGATCTGTCTTGTATCCGCCTTCTTTTCTATTATTTACCAATATACTTCTTTCATTTTTCGTTTTTTTTTCCTGGTTCAACATTTTTTCCTGTGTAGCTGATACACTTTTAACCATTTTCTTTGAATATTTTTATCAGATCTCTTGTCCTGCCAATGATAAGTTGCTCTACATCCTTGCGATGTTGAAGTTGGAGTTGGTCCAAAAGAAAGTTCTGATATTCACTAATAACATAGATACGAGTTTCAGATTGAAACTATTCTTGGAGAAGGTATGTGCCAGACATAAAATCATTGATAAGTTTTCACCTAACAGGTTTATGCACTCGGGATAGTTGGCCAATGGCATGATATTAAAGATTATATTACTAAGTGGTCAAGAATTTGAACTTGGTCATGCCCATTCTTTGTAATAAAAGTTAAATTTTATCACATGGTAGATGTAAAACCATTCAAGAACCTATATTTAACAGCTTGAGATTTTGGTATAGATGATTATTGACAGCATTTGCATCTTTTTGTATTCATCAATTAAATTTAATCCATCCAATCTTACATGTTATATCATACTACATGTCATACACTGATGTTGGCACATTTTTTTTAACAATTCACATTGATATCTATACTGCATCAGTTTAATGGGTGATAATCAATCAACATATTTTCTGTAATCTGAATTTTTTGTTGCCTTAAATATGTCTGCTCAAAATGATTTGGAGTTTTGCTCAACTCAGGAAAATCATGTTTCTTAGTTACAATTATTTCCTCAACCACACTGCTTCCACCAGTCTGAACATTTATAGTTTTGCACCTGAGGTTATTTTGTTTTCATCACTTCTTCCTCTCTCATTTTCTAATCTTTGCCCTCTCTATCATTCTAGTTTGGGATCAAGTCGGCTGTTTTAAATGCTGAATTGCCTCAGAATTCCCGTCTCCATATTCTTGAGGTATGTAATTTTATCCACTTCCGTCTTTCTTTTGGTATTATAGCTGCTAAGGTTTTTCGACTTAACCCAGTTCTATGACACGTTCCTACTAGTGAAATATTAGGAGAAATTTTTGGAGATTTTGGTTTGGAGAAACATATTCTATTTTCATTTTTATTTTTACTTGTAATTACCAAAATGTCATCATGTTTCTATTTTGCCAAGTTTTTTTATAGAATACTTTTTTGTTTCCATCAAAACCTCCAAGCATAATTAATTGAAAATTAGATGGCATTTTGCAAATTAAAATTGAAAAACATAAAATGTTTGAACAAACCAAATCCTTGTGTTCTTAAACGTGGATTTATTATTTTATTCATTCATTTATATATAGATATACGCTTGACATTTTATTACATGATTTTGATGAGCTTATTTTCATCAGGAATTCAATGCCGGCCTATTTGATTATCTAATTGCGACAGATATCAGCCAGTCAACGGAGAAGGATGAAGCACCTAAGGAAAATATTGTTGGATCAAAAAAGTCTAAAAAATATACAAAGCTAAAATTAGATTCTGAATTCGGAGTAGTAAGGGGAATTGACTTCAAAAATGTATACACGGTATGCATGCCAACTCTTATATCTCTTTCTGACATGTTTTTGTCTGGTGTGTACGTTTGAAATTATAATTAGAGTTGTATACTATGGTAGATTTCATCTTCTGATTCATATCTTTGTTTCATTGGGAGATTGCCATGTTCACTGAAATCATTTACTTACTGCTTTCTCTTGCTGATGAACAGGTTATAAACTTTGAAATGCCCCGCAGTGTGACAGGATACGTACATCGAATTGGACGTACGGGAAGAGCATACAGTTCTGGTACTTCTATCTCCTTGGTAAGTTTGTAAGACAAACAAAACAGACAAACAAAACTCCTCTTCTCCACCAAGTAAATTTTGCAAAGTATTGTGACTCTTTGATTTTTTGCTCTCTAATCCGTGTTGTTCTTTTGGTATATTATTGACATCCAAGCTACATTACCTTGGCATTTAGATTTTCCTGTTTCCTTGTAGGTTTCTACAGATGAGATGGATACCTTTGAAGAAGTAAGATCTTTTGTTGGGGACAATGAAAACAATGGCTCAAACTCAATCACAGAGTTTCCCTTACTCACCAAGAGTGCAGTTGAATCTTTACGGTATAGGGCTGAGGTGAGTTATATTTCCCCATACTCTCAACAAAAATATCATAGATGCATCAACCAATGAGAGCTTTGAATGATTTTTTTGTGAAACAAAAAACTGATTATGAATCCTTTAGTTTAAAAATGAAATTATCTCATCTTATATTATGTTTCAATACTTTTAAGCCTCATACGGTTTCCATGACAGGATACAGATAAGAATAGGAACGGGTACAAGTTTAATATGGATCTTTTCCCATTCCTATCTAATGCGCACACAGTATTATGTCATTGTTAACCTATTTTGTGTTTGAGGTGGATTAGACAATGATACCCTATTCCTATCTAATGCACACACATTATTATGTCACTGTTATCCTATTTTGTTTTTGAGGTGGGGACTAGACAATGATGATACTATATGATAAAAAAAAAATAGGAACGGTACAAGTTTAATATGGATCTTTTCCTATTCCTATCTAATGCACACACAGCATTATGTCATTGTTATCCTATCGTGTCACATTGAATTAACAAACATTGGATTATTATAGGGTAGCAAAATAACCAATTGATCTATCTTCTCTCATTCTAGCTACCAAACAGAGCCTTAAAAGTTTGTGTTTAGTCAAACAATAAACATTATTTTTATGATTAAATTCCATGTCGTTCCTGTCTCAGTTAGACTTGCGAATATTTAGATTTACTAGCATCTTCCATGTCTTTTCAGTTATTTTTTTAATATATAGATGATATTTTGGCACTCTAGCTGCTTTGTAAACTATATTGATGATTGACATTGTTTTGCAGGATGTTGCAAAGAGTGTAACTAAAATTGCTGTCCGAGAATCACGAGCCCAGGATTTGAGGAATGAAATTTTGAACTCTGCAAAGTAAGTCCCTGGTATTGAATGTGTTATGCTCGAGATTTGTAACTCTGATCTTAACCTTTTTTCATCTTCTAATCCATTCCTCCACACCTTTGTTTTTCCATTTTAGGCTGACGGCTCACTTTCAGACTAATCCAAGAGACTTAGGTAATGTTATTGGTTCATTTATTGTTACTGTATGTAAATTTGGCATTTATTTTTGCCTTTTTCATGTTTGAAGAAGTTAAACTTTAACCTTTGAAATTTTATTTGAGCAGATCTATTGAAACATGACAAAGTTTTGAGCAAAACCGCTCCTCCTCCACACCTTTGCGATGTCCCAGATTACCTAATAGACAAAACAACAAAAGAGGCAAGGGCAATGGTTAAGCTTACCAGAGATGCAATGGGAAATAATAATCACCGACGGGGATCCAAGAGAAAATCAAGAAAAGGCAGTGACCCTCTGATGGCCATCTCTGCTGGGGTATGA
Protein sequence

>MS.gene071460.t1

MAAGATVNANETTREHTEQEVDEDRSFEELGLDARLVRALLKKRIEKPTPIQHVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTPNVDRKKLAPNVFVLAPSRELCQQIYVEVKSLLELCKVPLKVVQLNSNMLATDLQAALVGPPDVLISTPACIAKCLSNSVLQAASINGSLETLVLDEADLLLSYGYENDIKALTPHIPRSCQCLLMSATSSDDVDKLKKLMLHNPVILTLPEVGNRKDEVIPKNVQQFWISCPANDKLLYILAMLKLELVQKKVLIFTNNIDTSFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDISQSTEKDEAPKENIVGSKKSKKYTKLKLDSEFGVVRGIDFKNVYTVINFEMPRSVTGYVHRIGRTGRAYSSGTSISLVSTDEMDTFEEVRSFVGDNENNGSNSITEFPLLTKSAVESLRYRAEDVAKSVTKIAVRESRAQDLRNEILNSAKLTAHFQTNPRDLDLLKHDKVLSKTAPPPHLCDVPDYLIDKTTKEARAMVKLTRDAMGNNNHRRGSKRKSRKGSDPLMAISAGV