Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90359.t1 | XP_003591129.1 | 87.1 | 604 | 20 | 2 | 1 | 546 | 1 | 604 | 6.30E-279 | 969.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90359.t1 | Q9SW44 | 55.8 | 577 | 184 | 6 | 26 | 532 | 47 | 622 | 6.2e-158 | 558.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90359.t1 | G7I8N0 | 87.1 | 604 | 20 | 2 | 1 | 546 | 1 | 604 | 4.6e-279 | 969.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056051 | MS.gene90359 | 0.861293 | 1.14E-63 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90359.t1 | MTR_1g083130 | 87.086 | 604 | 20 | 2 | 1 | 546 | 1 | 604 | 0.0 | 1045 |
| MS.gene90359.t1 | MTR_3g049990 | 26.810 | 373 | 184 | 7 | 26 | 349 | 152 | 484 | 2.30e-26 | 114 |
| MS.gene90359.t1 | MTR_2g041140 | 27.807 | 374 | 180 | 8 | 26 | 349 | 141 | 474 | 4.49e-26 | 113 |
| MS.gene90359.t1 | MTR_7g109720 | 23.483 | 379 | 191 | 7 | 25 | 349 | 231 | 564 | 1.57e-22 | 102 |
| MS.gene90359.t1 | MTR_7g056830 | 25.301 | 415 | 207 | 13 | 18 | 375 | 2 | 370 | 2.59e-21 | 97.1 |
| MS.gene90359.t1 | MTR_6g082080 | 25.060 | 415 | 208 | 13 | 18 | 375 | 2 | 370 | 1.42e-20 | 94.7 |
| MS.gene90359.t1 | MTR_6g005550 | 24.147 | 381 | 183 | 13 | 26 | 349 | 165 | 496 | 5.17e-17 | 85.1 |
| MS.gene90359.t1 | MTR_2g066050 | 27.203 | 261 | 141 | 6 | 95 | 349 | 167 | 384 | 8.64e-17 | 83.6 |
| MS.gene90359.t1 | MTR_2g032630 | 26.190 | 252 | 141 | 6 | 100 | 349 | 619 | 827 | 1.43e-16 | 84.0 |
| MS.gene90359.t1 | MTR_5g090120 | 23.438 | 384 | 202 | 9 | 15 | 348 | 70 | 411 | 5.41e-15 | 78.2 |
| MS.gene90359.t1 | MTR_4g114120 | 25.097 | 259 | 141 | 6 | 100 | 349 | 275 | 489 | 3.78e-14 | 75.9 |
| MS.gene90359.t1 | MTR_1g095810 | 27.111 | 225 | 114 | 5 | 130 | 349 | 304 | 483 | 6.63e-14 | 74.7 |
| MS.gene90359.t1 | MTR_1g026830 | 27.111 | 225 | 114 | 5 | 130 | 349 | 306 | 485 | 1.26e-13 | 73.9 |
| MS.gene90359.t1 | MTR_5g092560 | 25.000 | 256 | 143 | 7 | 100 | 349 | 199 | 411 | 1.52e-13 | 73.9 |
| MS.gene90359.t1 | MTR_5g092560 | 25.541 | 231 | 126 | 6 | 125 | 349 | 10 | 200 | 2.51e-13 | 72.8 |
| MS.gene90359.t1 | MTR_8g027770 | 23.636 | 275 | 167 | 5 | 80 | 349 | 310 | 546 | 7.77e-13 | 71.6 |
| MS.gene90359.t1 | MTR_2g055850 | 23.108 | 251 | 152 | 6 | 100 | 349 | 215 | 425 | 1.18e-11 | 67.8 |
| MS.gene90359.t1 | MTR_8g027775 | 23.735 | 257 | 153 | 5 | 98 | 349 | 229 | 447 | 3.75e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90359.t1 | AT4G34910 | 57.439 | 578 | 175 | 6 | 25 | 532 | 46 | 622 | 0.0 | 588 |
| MS.gene90359.t1 | AT4G16630 | 28.389 | 391 | 186 | 11 | 26 | 362 | 168 | 518 | 1.81e-25 | 111 |
| MS.gene90359.t1 | AT5G60990 | 25.588 | 340 | 194 | 10 | 94 | 426 | 135 | 422 | 5.11e-20 | 93.6 |
| MS.gene90359.t1 | AT2G47330 | 22.487 | 378 | 196 | 6 | 25 | 349 | 228 | 561 | 1.59e-18 | 89.7 |
| MS.gene90359.t1 | AT5G26742 | 26.471 | 272 | 159 | 5 | 77 | 348 | 207 | 437 | 2.25e-18 | 89.4 |
| MS.gene90359.t1 | AT5G26742 | 26.471 | 272 | 159 | 5 | 77 | 348 | 207 | 437 | 2.26e-18 | 89.4 |
| MS.gene90359.t1 | AT5G26742 | 26.471 | 272 | 159 | 5 | 77 | 348 | 114 | 344 | 3.20e-18 | 88.6 |
| MS.gene90359.t1 | AT3G01540 | 23.733 | 375 | 192 | 10 | 26 | 349 | 159 | 490 | 3.10e-17 | 85.5 |
| MS.gene90359.t1 | AT3G01540 | 23.733 | 375 | 192 | 10 | 26 | 349 | 159 | 490 | 3.37e-17 | 85.5 |
| MS.gene90359.t1 | AT3G01540 | 23.733 | 375 | 192 | 10 | 26 | 349 | 159 | 490 | 3.37e-17 | 85.5 |
| MS.gene90359.t1 | AT3G01540 | 23.733 | 375 | 192 | 10 | 26 | 349 | 159 | 490 | 3.37e-17 | 85.5 |
| MS.gene90359.t1 | AT3G22310 | 25.703 | 249 | 144 | 5 | 100 | 348 | 240 | 447 | 9.12e-16 | 80.9 |
| MS.gene90359.t1 | AT3G22310 | 25.703 | 249 | 144 | 5 | 100 | 348 | 240 | 447 | 9.36e-16 | 80.9 |
| MS.gene90359.t1 | AT4G00660 | 23.377 | 385 | 201 | 8 | 13 | 349 | 118 | 456 | 9.40e-16 | 80.5 |
| MS.gene90359.t1 | AT4G00660 | 23.377 | 385 | 201 | 8 | 13 | 349 | 118 | 456 | 9.40e-16 | 80.5 |
| MS.gene90359.t1 | AT3G22330 | 22.670 | 397 | 214 | 10 | 3 | 348 | 81 | 435 | 1.49e-15 | 80.1 |
| MS.gene90359.t1 | AT5G65900 | 24.701 | 251 | 148 | 5 | 100 | 349 | 278 | 488 | 3.26e-15 | 79.3 |
| MS.gene90359.t1 | AT1G16280 | 25.085 | 295 | 176 | 7 | 58 | 349 | 138 | 390 | 2.44e-14 | 75.9 |
| MS.gene90359.t1 | AT3G18600 | 23.200 | 250 | 152 | 5 | 100 | 349 | 213 | 422 | 2.03e-12 | 70.1 |
| MS.gene90359.t1 | AT5G08620 | 22.464 | 276 | 169 | 5 | 80 | 349 | 190 | 426 | 1.60e-11 | 67.4 |
Find 119 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTGATGGCCATCTCTGC+TGG | 0.215369 | 1.3:-58693030 | MS.gene90359:CDS |
| AAGAAGACACTGGCAACTTC+TGG | 0.263713 | 1.3:+58697195 | None:intergenic |
| TGAATATCAGAACTTTCTTT+TGG | 0.268968 | 1.3:+58696277 | None:intergenic |
| TTTCAGATTGAAACTATTCT+TGG | 0.271547 | 1.3:-58696235 | MS.gene90359:CDS |
| AGTTTCAAGAGAACCATTAA+TGG | 0.277015 | 1.3:+58697968 | None:intergenic |
| CTTCAGGCAGCATCCATTAA+TGG | 0.291130 | 1.3:-58697981 | MS.gene90359:CDS |
| TGTGGTTTCGTTCGCGTTTA+CGG | 0.312496 | 1.3:+58699193 | None:intergenic |
| CTAAAATTAGATTCTGAATT+CGG | 0.328738 | 1.3:-58694989 | MS.gene90359:CDS |
| CAGTTGAATCTTTACGGTAT+AGG | 0.338628 | 1.3:-58694364 | MS.gene90359:CDS |
| TCCTTACGGTTTCCCACTTC+AGG | 0.340083 | 1.3:+58696674 | None:intergenic |
| AATTACATACCTCAAGAATA+TGG | 0.342339 | 1.3:+58695543 | None:intergenic |
| GGAATCGCAACGTGCTGAAT+TGG | 0.348704 | 1.3:+58699062 | None:intergenic |
| TGCAGCAAGCAGCACTGGTT+GGG | 0.349074 | 1.3:-58698064 | MS.gene90359:intron |
| ATTATTTCCCATTGCATCTC+TGG | 0.349578 | 1.3:+58693098 | None:intergenic |
| AAATTTCATTCCTCAAATCC+TGG | 0.357679 | 1.3:+58693505 | None:intergenic |
| CTCTGATGGCCATCTCTGCT+GGG | 0.362231 | 1.3:-58693029 | MS.gene90359:CDS |
| TCGCAATTAGATAATCAAAT+AGG | 0.362937 | 1.3:+58695095 | None:intergenic |
| AACTGCACTCTTGGTGAGTA+AGG | 0.367677 | 1.3:+58694382 | None:intergenic |
| GCAGATCTTCTATTATCATA+TGG | 0.372693 | 1.3:-58697256 | MS.gene90359:CDS |
| TTTGTCTAACTCAGTACTTC+AGG | 0.376348 | 1.3:-58697997 | MS.gene90359:CDS |
| CTTCATCCTTCTCCGTTGAC+TGG | 0.388679 | 1.3:+58695062 | None:intergenic |
| AGTTGAATCTTTACGGTATA+GGG | 0.391457 | 1.3:-58694363 | MS.gene90359:CDS |
| AGAGTGCAGTTGAATCTTTA+CGG | 0.420853 | 1.3:-58694370 | MS.gene90359:CDS |
| AATCCTGGGCTCGTGATTCT+CGG | 0.424953 | 1.3:+58693520 | None:intergenic |
| CAGACTAATCCAAGAGACTT+AGG | 0.426488 | 1.3:-58693347 | MS.gene90359:intron |
| TCAGGCAGAGTCAAGATAAC+GGG | 0.428996 | 1.3:+58696692 | None:intergenic |
| AACCTAGCTCTTCGAAGCTT+CGG | 0.438740 | 1.3:+58699138 | None:intergenic |
| ATAACATTACCTAAGTCTCT+TGG | 0.449672 | 1.3:+58693338 | None:intergenic |
| ACGGGAAGAGCATACAGTTC+TGG | 0.456133 | 1.3:-58694691 | MS.gene90359:intron |
| TTGCAGCAAGCAGCACTGGT+TGG | 0.456175 | 1.3:-58698065 | MS.gene90359:intron |
| CGTCTTACCTTCAGAATCAA+TGG | 0.456998 | 1.3:+58699041 | None:intergenic |
| TAGGGATGACCTCATCCTTA+CGG | 0.460048 | 1.3:+58696660 | None:intergenic |
| TAAAGATTCAACTGCACTCT+TGG | 0.463233 | 1.3:+58694373 | None:intergenic |
| ATTCTGAATTCGGAGTAGTA+AGG | 0.464569 | 1.3:-58694979 | MS.gene90359:CDS |
| GCACCTAAGGAAAATATTGT+TGG | 0.467384 | 1.3:-58695040 | MS.gene90359:CDS |
| TACGTATCCTGTCACACTGC+GGG | 0.472114 | 1.3:+58694728 | None:intergenic |
| AATCACGAGCCCAGGATTTG+AGG | 0.472222 | 1.3:-58693515 | MS.gene90359:CDS |
| CAATATGCTTGCTACTGACT+TGG | 0.473105 | 1.3:-58698704 | MS.gene90359:intron |
| CGCGTTTACGGTTGCTCCGG+CGG | 0.475611 | 1.3:+58699205 | None:intergenic |
| TCCAAGAGAAAATCAAGAAA+AGG | 0.478895 | 1.3:-58693060 | MS.gene90359:CDS |
| GAAATGCCCCGCAGTGTGAC+AGG | 0.481074 | 1.3:-58694735 | MS.gene90359:CDS |
| CATCCTTGCGATGTTGAAGT+TGG | 0.484838 | 1.3:-58696307 | MS.gene90359:CDS |
| CAGATCTTCTATTATCATAT+GGG | 0.489340 | 1.3:-58697255 | MS.gene90359:CDS |
| GATGTAGAGCAACTTATCAT+TGG | 0.489837 | 1.3:+58696326 | None:intergenic |
| TTCTGAATTCGGAGTAGTAA+GGG | 0.495213 | 1.3:-58694978 | MS.gene90359:CDS |
| GTGTTTGCAGCAAGCAGCAC+TGG | 0.511131 | 1.3:-58698069 | MS.gene90359:intron |
| AATAGACAAAACAACAAAAG+AGG | 0.511196 | 1.3:-58693142 | MS.gene90359:CDS |
| AGAAGACACTGGCAACTTCT+GGG | 0.513801 | 1.3:+58697196 | None:intergenic |
| AATTTCATTCCTCAAATCCT+GGG | 0.518000 | 1.3:+58693506 | None:intergenic |
| AAAAGATCTTACTTCTTCAA+AGG | 0.519084 | 1.3:+58694451 | None:intergenic |
| TGCGATGTTGAAGTTGGAGT+TGG | 0.522591 | 1.3:-58696301 | MS.gene90359:CDS |
| ATCTTTACGGTATAGGGCTG+AGG | 0.523411 | 1.3:-58694357 | MS.gene90359:intron |
| GGATCATACCCCAGCAGAGA+TGG | 0.524252 | 1.3:+58693020 | None:intergenic |
| ATTGAAACTATTCTTGGAGA+AGG | 0.526200 | 1.3:-58696229 | MS.gene90359:intron |
| CTTGGCTATGCAAGCAGGAG+TGG | 0.526639 | 1.3:+58698022 | None:intergenic |
| TGCGATTCCATTGATTCTGA+AGG | 0.530795 | 1.3:-58699048 | MS.gene90359:intron |
| ACGTACATCGAATGGACGTA+CGG | 0.531498 | 1.3:-58694710 | MS.gene90359:CDS |
| TAGAGCAACTTATCATTGGC+AGG | 0.531606 | 1.3:+58696330 | None:intergenic |
| TTTCATCAGGAATTCAATGC+CGG | 0.531649 | 1.3:-58695118 | MS.gene90359:intron |
| GTTCGCGTTTACGGTTGCTC+CGG | 0.534237 | 1.3:+58699202 | None:intergenic |
| GGGAAATAATAATCACCGAC+GGG | 0.535938 | 1.3:-58693085 | MS.gene90359:CDS |
| GTAGGTTTCTACAGATGAGA+TGG | 0.540473 | 1.3:-58694477 | MS.gene90359:intron |
| TAAGCTTACCAGAGATGCAA+TGG | 0.542536 | 1.3:-58693106 | MS.gene90359:CDS |
| TTCTTATGTCTGCAACATCA+AGG | 0.543076 | 1.3:-58697177 | MS.gene90359:intron |
| GGAGTGGAGATTAAAACATC+GGG | 0.547109 | 1.3:+58698038 | None:intergenic |
| CAAAACAACAAAAGAGGCAA+GGG | 0.551778 | 1.3:-58693136 | MS.gene90359:CDS |
| GCCTGAAGTGGGAAACCGTA+AGG | 0.554707 | 1.3:-58696675 | MS.gene90359:CDS |
| ACATCGCAAAGGTGTGGAGG+AGG | 0.555139 | 1.3:+58693177 | None:intergenic |
| AACAAAAGAGGCAAGGGCAA+TGG | 0.555238 | 1.3:-58693130 | MS.gene90359:CDS |
| TTCAGGCAGAGTCAAGATAA+CGG | 0.557307 | 1.3:+58696691 | None:intergenic |
| TATCTTGACTCTGCCTGAAG+TGG | 0.559784 | 1.3:-58696687 | MS.gene90359:CDS |
| GGAGAAGGATGAAGCACCTA+AGG | 0.564618 | 1.3:-58695053 | MS.gene90359:CDS |
| TTCCCGTCTCCATATTCTTG+AGG | 0.564842 | 1.3:-58695552 | MS.gene90359:intron |
| AAACACTTGGCTATGCAAGC+AGG | 0.568069 | 1.3:+58698017 | None:intergenic |
| TTCAACTGCACAACTTTGAG+CGG | 0.568598 | 1.3:+58698730 | None:intergenic |
| CCGCAACCAGTAATGGCCGC+CGG | 0.569759 | 1.3:-58699221 | None:intergenic |
| TTGTTCTGTGTGCTCACGTG+TGG | 0.571100 | 1.3:+58699175 | None:intergenic |
| TATCAGCCAGTCAACGGAGA+AGG | 0.571214 | 1.3:-58695068 | MS.gene90359:CDS |
| AGTGGGAAACCGTAAGGATG+AGG | 0.579561 | 1.3:-58696669 | MS.gene90359:CDS |
| AAGCTTACCAGAGATGCAAT+GGG | 0.579573 | 1.3:-58693105 | MS.gene90359:CDS |
| GCAACGTGCTGAATTGGAGT+AGG | 0.579592 | 1.3:+58699068 | None:intergenic |
| AAAAGGCAGTGACCCTCTGA+TGG | 0.584949 | 1.3:-58693043 | MS.gene90359:CDS |
| TGTCCGAGAATCACGAGCCC+AGG | 0.588508 | 1.3:-58693523 | MS.gene90359:CDS |
| GCGGAACTTTGCATAGCTCA+AGG | 0.591214 | 1.3:+58698749 | None:intergenic |
| ACAAAACAACAAAAGAGGCA+AGG | 0.591460 | 1.3:-58693137 | MS.gene90359:CDS |
| TACCTCAAGAATATGGAGAC+GGG | 0.591564 | 1.3:+58695550 | None:intergenic |
| ATCTTGACTCTGCCTGAAGT+GGG | 0.591582 | 1.3:-58696686 | MS.gene90359:CDS |
| AGGAGTGGAGATTAAAACAT+CGG | 0.592149 | 1.3:+58698037 | None:intergenic |
| ATTCTAGTTTGGGATCAAGT+CGG | 0.592413 | 1.3:-58695603 | MS.gene90359:intron |
| GCAAGCAATGGCAAAAGCAA+TGG | 0.593395 | 1.3:-58692768 | MS.gene90359:CDS |
| CAGCAGAGATGGCCATCAGA+GGG | 0.596159 | 1.3:+58693031 | None:intergenic |
| GACAGATATCAGCCAGTCAA+CGG | 0.597178 | 1.3:-58695074 | MS.gene90359:CDS |
| TGGCAACTTCTGGGTATGTG+TGG | 0.598594 | 1.3:+58697205 | None:intergenic |
| ACTGCACTCTTGGTGAGTAA+GGG | 0.600084 | 1.3:+58694383 | None:intergenic |
| TACTGAGTTAGACAAACACT+TGG | 0.600301 | 1.3:+58698004 | None:intergenic |
| CACAGAACAAGAAGTAGACG+AGG | 0.606070 | 1.3:-58699162 | MS.gene90359:CDS |
| GACAGGATACGTACATCGAA+TGG | 0.606348 | 1.3:-58694718 | MS.gene90359:CDS |
| TCTGGGACATCGCAAAGGTG+TGG | 0.611172 | 1.3:+58693171 | None:intergenic |
| GTTGGGGACAATGAAAACAA+TGG | 0.611219 | 1.3:-58694428 | MS.gene90359:CDS |
| AATTAGATAATCAAATAGGC+CGG | 0.612982 | 1.3:+58695099 | None:intergenic |
| GACCGAAGCTTCGAAGAGCT+AGG | 0.613429 | 1.3:-58699140 | MS.gene90359:CDS |
| ACTCCAACTTCAACATCGCA+AGG | 0.621489 | 1.3:+58696304 | None:intergenic |
| TGGGAAATAATAATCACCGA+CGG | 0.622669 | 1.3:-58693086 | MS.gene90359:CDS |
| TCTGATGGCCATCTCTGCTG+GGG | 0.623283 | 1.3:-58693028 | MS.gene90359:intron |
| CCAGCAGAGATGGCCATCAG+AGG | 0.626747 | 1.3:+58693030 | None:intergenic |
| GGGACATCGCAAAGGTGTGG+AGG | 0.629288 | 1.3:+58693174 | None:intergenic |
| TGAAACTCTAGTTCTTGATG+AGG | 0.636636 | 1.3:-58697952 | MS.gene90359:intron |
| ATACCTCAAGAATATGGAGA+CGG | 0.637365 | 1.3:+58695549 | None:intergenic |
| GCAAAGGTGTGGAGGAGGAG+CGG | 0.643144 | 1.3:+58693182 | None:intergenic |
| TCTGAATTCGGAGTAGTAAG+GGG | 0.647959 | 1.3:-58694977 | MS.gene90359:CDS |
| GGTAATCTGGGACATCGCAA+AGG | 0.648080 | 1.3:+58693166 | None:intergenic |
| ATATGGAGACGGGAATTCTG+AGG | 0.653312 | 1.3:+58695560 | None:intergenic |
| CGTACATCGAATGGACGTAC+GGG | 0.668531 | 1.3:-58694709 | MS.gene90359:CDS |
| GTGGAGATTAAAACATCGGG+AGG | 0.679011 | 1.3:+58698041 | None:intergenic |
| TTGCAGACATAAGAAGACAC+TGG | 0.684106 | 1.3:+58697185 | None:intergenic |
| CAGGCAGAGTCAAGATAACG+GGG | 0.698716 | 1.3:+58696693 | None:intergenic |
| ACGTATCCTGTCACACTGCG+GGG | 0.709245 | 1.3:+58694729 | None:intergenic |
| GTACGTATCCTGTCACACTG+CGG | 0.709671 | 1.3:+58694727 | None:intergenic |
| GGAAATAATAATCACCGACG+GGG | 0.733097 | 1.3:-58693084 | MS.gene90359:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATAAAATAAAAA+GGG | + | chr1.3:58694807-58694826 | None:intergenic | 0.0% |
| !! | TATATATATATAAAATAAAA+AGG | + | chr1.3:58694808-58694827 | None:intergenic | 0.0% |
| !! | ATAAAAATATTCAAAGAAAA+TGG | + | chr1.3:58695578-58695597 | None:intergenic | 10.0% |
| !! | ATAATTAATTGAAAATTAGA+TGG | - | chr1.3:58696657-58696676 | MS.gene90359:CDS | 10.0% |
| !! | CTATATGATAAAAAAAAAAT+AGG | - | chr1.3:58697995-58698014 | MS.gene90359:CDS | 10.0% |
| !!! | CTTTTAAATTTTTATAATGT+TGG | - | chr1.3:58694171-58694190 | MS.gene90359:intron | 10.0% |
| !!! | TAATTTCATTTTTAAACTAA+AGG | + | chr1.3:58697710-58697729 | None:intergenic | 10.0% |
| !!! | TTAATATATAGATGATATTT+TGG | - | chr1.3:58698316-58698335 | MS.gene90359:intron | 10.0% |
| !! | AAGTATTCTATAAAAAAACT+TGG | + | chr1.3:58696612-58696631 | None:intergenic | 15.0% |
| !! | TGATAAAAAAAAAATAGGAA+CGG | - | chr1.3:58698000-58698019 | MS.gene90359:CDS | 15.0% |
| !! | TTAAAGATTATATTACTAAG+TGG | - | chr1.3:58695814-58695833 | MS.gene90359:intron | 15.0% |
| !! | TTATATTTGTATCATTTGAT+TGG | - | chr1.3:58694060-58694079 | MS.gene90359:intron | 15.0% |
| !!! | AAAAGTTAAATTTTATCACA+TGG | - | chr1.3:58695875-58695894 | MS.gene90359:intron | 15.0% |
| !!! | AAAGAAGTAACATTAATTTT+TGG | + | chr1.3:58694091-58694110 | None:intergenic | 15.0% |
| !!! | AATTTTCAATTAATTATGCT+TGG | + | chr1.3:58696654-58696673 | None:intergenic | 15.0% |
| !!! | ATGTTGGTTAATTTTAATTT+TGG | - | chr1.3:58694187-58694206 | MS.gene90359:intron | 15.0% |
| !!! | ATTCTATTTGTTTTAGAATA+TGG | - | chr1.3:58693818-58693837 | MS.gene90359:intron | 15.0% |
| !!! | TAACTTTTATTACAAAGAAT+GGG | + | chr1.3:58695863-58695882 | None:intergenic | 15.0% |
| !!! | TGCAAAAAATATTCTAAAAA+TGG | - | chr1.3:58693398-58693417 | MS.gene90359:intron | 15.0% |
| !!! | TTAACTTTTATTACAAAGAA+TGG | + | chr1.3:58695864-58695883 | None:intergenic | 15.0% |
| !! | AAAAAATAACTGAAAAGACA+TGG | + | chr1.3:58698297-58698316 | None:intergenic | 20.0% |
| !! | AAACTTCACTCAAATTATTT+GGG | - | chr1.3:58694516-58694535 | MS.gene90359:intron | 20.0% |
| !! | AACAAACATTGGATTATTAT+AGG | - | chr1.3:58698110-58698129 | MS.gene90359:intron | 20.0% |
| !! | AATACTTTGCAAAATTTACT+TGG | + | chr1.3:58697341-58697360 | None:intergenic | 20.0% |
| !! | ACAAACATTGGATTATTATA+GGG | - | chr1.3:58698111-58698130 | MS.gene90359:intron | 20.0% |
| !! | AGAAATGCAAAATATCAATT+TGG | + | chr1.3:58693456-58693475 | None:intergenic | 20.0% |
| !! | ATAAACATTTAATAGAAAGC+TGG | - | chr1.3:58693718-58693737 | MS.gene90359:intron | 20.0% |
| !! | ATAATTAGAGTTGTATACTA+TGG | - | chr1.3:58697075-58697094 | MS.gene90359:intron | 20.0% |
| !! | ATCAACTATAAAGAAATGAT+GGG | + | chr1.3:58694978-58694997 | None:intergenic | 20.0% |
| !! | ATTGTTACTGTATGTAAATT+TGG | - | chr1.3:58698635-58698654 | MS.gene90359:intron | 20.0% |
| !! | CTAAAATTAGATTCTGAATT+CGG | - | chr1.3:58696951-58696970 | MS.gene90359:intron | 20.0% |
| !! | TAAACTTCACTCAAATTATT+TGG | - | chr1.3:58694515-58694534 | MS.gene90359:intron | 20.0% |
| !! | TACTAAACTAAACAAACAAT+AGG | + | chr1.3:58694028-58694047 | None:intergenic | 20.0% |
| !! | TATCAACTATAAAGAAATGA+TGG | + | chr1.3:58694979-58694998 | None:intergenic | 20.0% |
| !! | TATGATATAACATGTAAGAT+TGG | + | chr1.3:58696010-58696029 | None:intergenic | 20.0% |
| !! | TATTGTATCATATCTTTCTT+TGG | - | chr1.3:58695409-58695428 | MS.gene90359:intron | 20.0% |
| !! | TGATATTGTAATGTTAATTG+CGG | - | chr1.3:58695357-58695376 | MS.gene90359:intron | 20.0% |
| !! | TTGATATCCAAATTATTGTT+GGG | - | chr1.3:58694130-58694149 | MS.gene90359:intron | 20.0% |
| !! | TTGGTAAATAATAGAAAAGA+AGG | + | chr1.3:58695484-58695503 | None:intergenic | 20.0% |
| !! | TTGTGTAATATACTTTCTAT+CGG | - | chr1.3:58695052-58695071 | MS.gene90359:CDS | 20.0% |
| !!! | AATATAATAGCTCTATTCAA+AGG | + | chr1.3:58698994-58699013 | None:intergenic | 20.0% |
| !!! | ATGAATTTTATGTCAAAACA+AGG | - | chr1.3:58694362-58694381 | MS.gene90359:CDS | 20.0% |
| !!! | ATGTAATGAAGATTTTTAAG+TGG | - | chr1.3:58694407-58694426 | MS.gene90359:CDS | 20.0% |
| !!! | ATTCATATCTTTGTTTCATT+GGG | - | chr1.3:58697114-58697133 | MS.gene90359:intron | 20.0% |
| !!! | CTGTTATGTGATATTATTTT+AGG | - | chr1.3:58695122-58695141 | MS.gene90359:intron | 20.0% |
| !!! | GAAAAATGAAAGAAGTATAT+TGG | + | chr1.3:58695503-58695522 | None:intergenic | 20.0% |
| !!! | GAAATATTAGGAGAAATTTT+TGG | - | chr1.3:58696503-58696522 | MS.gene90359:intron | 20.0% |
| !!! | TATAAGTTTGTTTAGTTACA+TGG | - | chr1.3:58693575-58693594 | MS.gene90359:intron | 20.0% |
| !!! | TTTCTTAAGTTCAAAACTTT+TGG | + | chr1.3:58694388-58694407 | None:intergenic | 20.0% |
| !!! | TTTGATTTTTCAGATATATG+TGG | - | chr1.3:58693155-58693174 | MS.gene90359:CDS | 20.0% |
| ! | AAAACTATAAATGTTCAGAC+TGG | + | chr1.3:58696250-58696269 | None:intergenic | 25.0% |
| ! | AAAAGATCTTACTTCTTCAA+AGG | + | chr1.3:58697492-58697511 | None:intergenic | 25.0% |
| ! | AACTTCACTCAAATTATTTG+GGG | - | chr1.3:58694517-58694536 | MS.gene90359:intron | 25.0% |
| ! | AACTTCTTCAAACATGAAAA+AGG | + | chr1.3:58698673-58698692 | None:intergenic | 25.0% |
| ! | AAGAAATTAGAAACAGAAAC+AGG | - | chr1.3:58695001-58695020 | MS.gene90359:CDS | 25.0% |
| ! | AATAGACAAAACAACAAAAG+AGG | - | chr1.3:58698798-58698817 | MS.gene90359:intron | 25.0% |
| ! | AATATACCAAAAGAACAACA+CGG | + | chr1.3:58697392-58697411 | None:intergenic | 25.0% |
| ! | AATCTCAAGCTGTTAAATAT+AGG | + | chr1.3:58695923-58695942 | None:intergenic | 25.0% |
| ! | AATCTTTAATATCATGCCAT+TGG | + | chr1.3:58695803-58695822 | None:intergenic | 25.0% |
| ! | AATTACATACCTCAAGAATA+TGG | + | chr1.3:58696400-58696419 | None:intergenic | 25.0% |
| ! | AATTAGATAATCAAATAGGC+CGG | + | chr1.3:58696844-58696863 | None:intergenic | 25.0% |
| ! | ACAAAAACACAAAAAGACAA+AGG | - | chr1.3:58699201-58699220 | MS.gene90359:CDS | 25.0% |
| ! | AGATGCTTTGTAATATAATG+TGG | - | chr1.3:58694894-58694913 | MS.gene90359:intron | 25.0% |
| ! | ATAAAACCCCAACAATAATT+TGG | + | chr1.3:58694140-58694159 | None:intergenic | 25.0% |
| ! | ATATAACATGTAAGATTGGA+TGG | + | chr1.3:58696006-58696025 | None:intergenic | 25.0% |
| ! | ATCTACTACATGAACTATAA+AGG | + | chr1.3:58693635-58693654 | None:intergenic | 25.0% |
| ! | CACATTGAATTAACAAACAT+TGG | - | chr1.3:58698099-58698118 | MS.gene90359:intron | 25.0% |
| ! | CAGATCTTCTATTATCATAT+GGG | - | chr1.3:58694685-58694704 | MS.gene90359:intron | 25.0% |
| ! | CTATAATACCAAAAGAAAGA+CGG | + | chr1.3:58696433-58696452 | None:intergenic | 25.0% |
| ! | CTGCTCAAATAAAATTTCAA+AGG | + | chr1.3:58698705-58698724 | None:intergenic | 25.0% |
| ! | CTTGATATCCAAATTATTGT+TGG | - | chr1.3:58694129-58694148 | MS.gene90359:intron | 25.0% |
| ! | GTAAATAATAGAAAAGAAGG+CGG | + | chr1.3:58695481-58695500 | None:intergenic | 25.0% |
| ! | GTTAAATATAGGTTCTTGAA+TGG | + | chr1.3:58695912-58695931 | None:intergenic | 25.0% |
| ! | TAAAAATGTTCAGCAATTCT+GGG | - | chr1.3:58695301-58695320 | MS.gene90359:intron | 25.0% |
| ! | TCGCAATTAGATAATCAAAT+AGG | + | chr1.3:58696848-58696867 | None:intergenic | 25.0% |
| ! | TCTACTACATGAACTATAAA+GGG | + | chr1.3:58693634-58693653 | None:intergenic | 25.0% |
| ! | TCTTAAATGTAGATCGAATT+AGG | - | chr1.3:58693357-58693376 | MS.gene90359:CDS | 25.0% |
| ! | TGACTTCAAAAATGTATACA+CGG | - | chr1.3:58696989-58697008 | MS.gene90359:intron | 25.0% |
| ! | TGATATCCAAATTATTGTTG+GGG | - | chr1.3:58694131-58694150 | MS.gene90359:intron | 25.0% |
| ! | TGCGTAAATATTAGATTTAG+AGG | - | chr1.3:58693692-58693711 | MS.gene90359:intron | 25.0% |
| ! | TGTATTCTGTATATAACTGA+CGG | - | chr1.3:58699093-58699112 | MS.gene90359:CDS | 25.0% |
| ! | TTATCTCTGTAAAATTGTAC+TGG | - | chr1.3:58695083-58695102 | MS.gene90359:CDS | 25.0% |
| ! | TTATGTGCATGTGTAAAATT+TGG | - | chr1.3:58699014-58699033 | MS.gene90359:intron | 25.0% |
| ! | TTGTTAGAAACAATTGCAAA+TGG | + | chr1.3:58695171-58695190 | None:intergenic | 25.0% |
| ! | TTTCAATTAATTATGCTTGG+AGG | + | chr1.3:58696651-58696670 | None:intergenic | 25.0% |
| ! | TTTCAGATTGAAACTATTCT+TGG | - | chr1.3:58695705-58695724 | MS.gene90359:intron | 25.0% |
| !! | AAGAAGTAAGATCTTTTGTT+GGG | - | chr1.3:58697495-58697514 | MS.gene90359:intron | 25.0% |
| !! | AGAATTGCTGAACATTTTTA+GGG | + | chr1.3:58695301-58695320 | None:intergenic | 25.0% |
| !! | ATAGAAACATGATGACATTT+TGG | + | chr1.3:58696585-58696604 | None:intergenic | 25.0% |
| !! | ATTTTGAGCAGACATATTTA+AGG | + | chr1.3:58696154-58696173 | None:intergenic | 25.0% |
| !! | CTTAGATTAGCTATAATAGA+GGG | - | chr1.3:58694549-58694568 | MS.gene90359:intron | 25.0% |
| !! | CTTATCAATGATTTTATGTC+TGG | + | chr1.3:58695743-58695762 | None:intergenic | 25.0% |
| !! | GATTCATATCTTTGTTTCAT+TGG | - | chr1.3:58697113-58697132 | MS.gene90359:intron | 25.0% |
| !! | GTATCCAAAATAATCTTTTC+AGG | - | chr1.3:58694662-58694681 | MS.gene90359:intron | 25.0% |
| !! | TAAGATTTAAAATGTTCTCC+CGG | + | chr1.3:58693342-58693361 | None:intergenic | 25.0% |
| !! | TAATACACTCTCAAACATTT+TGG | + | chr1.3:58694343-58694362 | None:intergenic | 25.0% |
| !! | TATTTAACAGCTTGAGATTT+TGG | - | chr1.3:58695924-58695943 | MS.gene90359:intron | 25.0% |
| !! | TCTTAGATTAGCTATAATAG+AGG | - | chr1.3:58694548-58694567 | MS.gene90359:intron | 25.0% |
| !! | TGAATATCAGAACTTTCTTT+TGG | + | chr1.3:58695666-58695685 | None:intergenic | 25.0% |
| !! | TGACTAAACACAAACTTTTA+AGG | + | chr1.3:58698189-58698208 | None:intergenic | 25.0% |
| !! | TTATAGCTAATCTAAGATTC+AGG | + | chr1.3:58694545-58694564 | None:intergenic | 25.0% |
| !! | TTTTGGATAGAAAATCAAAC+TGG | + | chr1.3:58694326-58694345 | None:intergenic | 25.0% |
| !! | TTTTGTCTATTAGGTAATCT+GGG | + | chr1.3:58698789-58698808 | None:intergenic | 25.0% |
| !!! | AATGAAGATTTTTAAGTGGA+AGG | - | chr1.3:58694411-58694430 | MS.gene90359:CDS | 25.0% |
| !!! | AATTTTTGGAGATTTTGGTT+TGG | - | chr1.3:58696517-58696536 | MS.gene90359:intron | 25.0% |
| !!! | ATATTTTTGTTGAGAGTATG+GGG | + | chr1.3:58697621-58697640 | None:intergenic | 25.0% |
| !!! | ATGGATTAGAAGATGAAAAA+AGG | + | chr1.3:58698528-58698547 | None:intergenic | 25.0% |
| !!! | CATTTTTCGTTTTTTTTTCC+TGG | - | chr1.3:58695515-58695534 | MS.gene90359:intron | 25.0% |
| !!! | CTTTTGTTGTTTTGTCTATT+AGG | + | chr1.3:58698798-58698817 | None:intergenic | 25.0% |
| !!! | GATATTTTTGTTGAGAGTAT+GGG | + | chr1.3:58697622-58697641 | None:intergenic | 25.0% |
| !!! | GGTTATTTTCATCTATACAA+AGG | + | chr1.3:58698973-58698992 | None:intergenic | 25.0% |
| !!! | GTTATCCTATTTTGTTTTTG+AGG | - | chr1.3:58697950-58697969 | MS.gene90359:intron | 25.0% |
| !!! | TCTTTTTTAAAACCTTTGTG+CGG | + | chr1.3:58699148-58699167 | None:intergenic | 25.0% |
| !!! | TGATATTTTTGTTGAGAGTA+TGG | + | chr1.3:58697623-58697642 | None:intergenic | 25.0% |
| AAAATGGAAAAACAAAGGTG+TGG | + | chr1.3:58698555-58698574 | None:intergenic | 30.0% | |
| AAATCATTCAAAGCTCTCAT+TGG | + | chr1.3:58697658-58697677 | None:intergenic | 30.0% | |
| AAATTTCATTCCTCAAATCC+TGG | + | chr1.3:58698438-58698457 | None:intergenic | 30.0% | |
| AATTTCATTCCTCAAATCCT+GGG | + | chr1.3:58698437-58698456 | None:intergenic | 30.0% | |
| ACATTTAATAGAAAGCTGGA+AGG | - | chr1.3:58693722-58693741 | MS.gene90359:intron | 30.0% | |
| ACTTTGCAAAATTTACTTGG+TGG | + | chr1.3:58697338-58697357 | None:intergenic | 30.0% | |
| AGAGACTTAGGTAATGTTAT+TGG | - | chr1.3:58698605-58698624 | MS.gene90359:intron | 30.0% | |
| AGCCTAAAATGGAAAAACAA+AGG | + | chr1.3:58698560-58698579 | None:intergenic | 30.0% | |
| AGTTGAATCTTTACGGTATA+GGG | - | chr1.3:58697577-58697596 | MS.gene90359:intron | 30.0% | |
| AGTTTCAAGAGAACCATTAA+TGG | + | chr1.3:58693975-58693994 | None:intergenic | 30.0% | |
| AGTTTCTTCCTATCAACATT+AGG | + | chr1.3:58692999-58693018 | None:intergenic | 30.0% | |
| ATAAAACTTTGTTGACAGCT+TGG | - | chr1.3:58698946-58698965 | MS.gene90359:intron | 30.0% | |
| ATAACATTACCTAAGTCTCT+TGG | + | chr1.3:58698605-58698624 | None:intergenic | 30.0% | |
| ATAATGTGTGTGCATTAGAT+AGG | + | chr1.3:58697921-58697940 | None:intergenic | 30.0% | |
| ATACAGATAAGAATAGGAAC+CGG | - | chr1.3:58697786-58697805 | MS.gene90359:intron | 30.0% | |
| ATCCATATTAAACTTGTACC+CGG | + | chr1.3:58697808-58697827 | None:intergenic | 30.0% | |
| ATGAGAGAAGATAGATCAAT+TGG | + | chr1.3:58698148-58698167 | None:intergenic | 30.0% | |
| ATTGAAACTATTCTTGGAGA+AGG | - | chr1.3:58695711-58695730 | MS.gene90359:intron | 30.0% | |
| ATTTAATAGAAAGCTGGAAG+GGG | - | chr1.3:58693724-58693743 | MS.gene90359:intron | 30.0% | |
| CAAAGATTAGAAAATGAGAG+AGG | + | chr1.3:58696306-58696325 | None:intergenic | 30.0% | |
| CATTTAATAGAAAGCTGGAA+GGG | - | chr1.3:58693723-58693742 | MS.gene90359:intron | 30.0% | |
| CTAAAAATGTTCAGCAATTC+TGG | - | chr1.3:58695300-58695319 | MS.gene90359:intron | 30.0% | |
| CTACTACATGAACTATAAAG+GGG | + | chr1.3:58693633-58693652 | None:intergenic | 30.0% | |
| CTATACTGCATCAGTTTAAT+GGG | - | chr1.3:58696084-58696103 | MS.gene90359:intron | 30.0% | |
| GATCCCAAATATAGAAAAGA+AGG | + | chr1.3:58695448-58695467 | None:intergenic | 30.0% | |
| GATGAAAACAAAATAACCTC+AGG | + | chr1.3:58696276-58696295 | None:intergenic | 30.0% | |
| GCAGATCTTCTATTATCATA+TGG | - | chr1.3:58694684-58694703 | MS.gene90359:intron | 30.0% | |
| GGGAAAGAAGATAAAAATGA+AGG | + | chr1.3:58693613-58693632 | None:intergenic | 30.0% | |
| GTAAATGATTTCAGTGAACA+TGG | + | chr1.3:58697146-58697165 | None:intergenic | 30.0% | |
| GTTCCTACTAGTGAAATATT+AGG | - | chr1.3:58696491-58696510 | MS.gene90359:intron | 30.0% | |
| TCCAAGAGAAAATCAAGAAA+AGG | - | chr1.3:58698880-58698899 | MS.gene90359:intron | 30.0% | |
| TCTATACTGCATCAGTTTAA+TGG | - | chr1.3:58696083-58696102 | MS.gene90359:intron | 30.0% | |
| TCTCCTAATATTTCACTAGT+AGG | + | chr1.3:58696497-58696516 | None:intergenic | 30.0% | |
| TGACCATTTCTAATCCAAAA+TGG | + | chr1.3:58693316-58693335 | None:intergenic | 30.0% | |
| TGAGCATAGAAATTGAAACA+GGG | + | chr1.3:58693080-58693099 | None:intergenic | 30.0% | |
| TGTTCAATGTCTACTAGAAT+TGG | + | chr1.3:58694600-58694619 | None:intergenic | 30.0% | |
| TGTTTACTCCTAATGTTGAT+AGG | - | chr1.3:58692988-58693007 | MS.gene90359:intron | 30.0% | |
| TTAATTCAATGTGACACGAT+AGG | + | chr1.3:58698092-58698111 | None:intergenic | 30.0% | |
| TTGAGCATAGAAATTGAAAC+AGG | + | chr1.3:58693081-58693100 | None:intergenic | 30.0% | |
| TTGCAAGACATTTAAGTCTA+GGG | + | chr1.3:58693383-58693402 | None:intergenic | 30.0% | |
| TTTAAGTGGAAGGAAAATGA+CGG | - | chr1.3:58694455-58694474 | MS.gene90359:CDS | 30.0% | |
| TTTGCAAGACATTTAAGTCT+AGG | + | chr1.3:58693384-58693403 | None:intergenic | 30.0% | |
| TTTGTAATATAATGTGGACG+TGG | - | chr1.3:58694900-58694919 | MS.gene90359:intron | 30.0% | |
| TTTGTCTTACAAACTTACCA+AGG | + | chr1.3:58697286-58697305 | None:intergenic | 30.0% | |
| ! | AAACTCTCAAATTCTGCTTT+TGG | + | chr1.3:58694437-58694456 | None:intergenic | 30.0% |
| ! | ACTTGTTTCCTCATTTTCTT+TGG | - | chr1.3:58693515-58693534 | MS.gene90359:CDS | 30.0% |
| ! | AGAAGTAAGATCTTTTGTTG+GGG | - | chr1.3:58697496-58697515 | MS.gene90359:intron | 30.0% |
| ! | CAATACTTTTAAGCCTCATA+CGG | - | chr1.3:58697750-58697769 | MS.gene90359:intron | 30.0% |
| ! | CAGAATTGCTGAACATTTTT+AGG | + | chr1.3:58695302-58695321 | None:intergenic | 30.0% |
| ! | GAAGAAGTAAGATCTTTTGT+TGG | - | chr1.3:58697494-58697513 | MS.gene90359:intron | 30.0% |
| ! | GATCCAACAATATTTTCCTT+AGG | + | chr1.3:58696906-58696925 | None:intergenic | 30.0% |
| ! | GTTAACCTATTTTGTGTTTG+AGG | - | chr1.3:58697871-58697890 | MS.gene90359:intron | 30.0% |
| ! | GTTTTGTCTATTAGGTAATC+TGG | + | chr1.3:58698790-58698809 | None:intergenic | 30.0% |
| ! | TCTGCCTGAAAAGATTATTT+TGG | + | chr1.3:58694669-58694688 | None:intergenic | 30.0% |
| ! | TGATCTTTTTGCACTTTTGA+AGG | - | chr1.3:58695029-58695048 | MS.gene90359:CDS | 30.0% |
| ! | TGGTTTGATGATTGTTCTAA+TGG | - | chr1.3:58693838-58693857 | MS.gene90359:intron | 30.0% |
| ! | TTGATAAGTTTTCACCTAAC+AGG | - | chr1.3:58695755-58695774 | MS.gene90359:intron | 30.0% |
| ! | TTTTGGTATTATAGCTGCTA+AGG | - | chr1.3:58696439-58696458 | MS.gene90359:intron | 30.0% |
| !! | ACACCATTTTGGATTAGAAA+TGG | - | chr1.3:58693310-58693329 | MS.gene90359:intron | 30.0% |
| !! | CTGTCAACAAAGTTTTATAG+AGG | + | chr1.3:58698944-58698963 | None:intergenic | 30.0% |
| !! | GGAGAAATTTTTGGAGATTT+TGG | - | chr1.3:58696512-58696531 | MS.gene90359:intron | 30.0% |
| !! | TTGATGAGCTTATTTTCATC+AGG | - | chr1.3:58696809-58696828 | MS.gene90359:intron | 30.0% |
| !!! | ATCCTATTTTGTTTTTGAGG+TGG | - | chr1.3:58697953-58697972 | MS.gene90359:CDS | 30.0% |
| !!! | ATTTGAGAGTTTTAAGTGGA+AGG | - | chr1.3:58694445-58694464 | MS.gene90359:CDS | 30.0% |
| !!! | CACCTTTGTTTTTCCATTTT+AGG | - | chr1.3:58698555-58698574 | MS.gene90359:intron | 30.0% |
| !!! | CAGAATTTGAGAGTTTTAAG+TGG | - | chr1.3:58694441-58694460 | MS.gene90359:CDS | 30.0% |
| !!! | TCCTATTTTGTTTTTGAGGT+GGG | - | chr1.3:58697954-58697973 | MS.gene90359:CDS | 30.0% |
| AAAAAAGACAGTGCAAGCAA+TGG | - | chr1.3:58699160-58699179 | MS.gene90359:CDS | 35.0% | |
| AACCGGGTACAAGTTTAATA+TGG | - | chr1.3:58697803-58697822 | MS.gene90359:intron | 35.0% | |
| AATCCACGTTTAAGAACACA+AGG | + | chr1.3:58696732-58696751 | None:intergenic | 35.0% | |
| AATCCTTGTGTTCTTAAACG+TGG | - | chr1.3:58696726-58696745 | MS.gene90359:CDS | 35.0% | |
| AATTATGCTTGGAGGTTTGA+TGG | + | chr1.3:58696643-58696662 | None:intergenic | 35.0% | |
| ACAAAACAACAAAAGAGGCA+AGG | - | chr1.3:58698803-58698822 | MS.gene90359:intron | 35.0% | |
| ACAGGAAAAAATGTTGAACC+AGG | + | chr1.3:58695536-58695555 | None:intergenic | 35.0% | |
| ACTATAAATGTTCAGACTGG+TGG | + | chr1.3:58696247-58696266 | None:intergenic | 35.0% | |
| AGAGTGCAGTTGAATCTTTA+CGG | - | chr1.3:58697570-58697589 | MS.gene90359:intron | 35.0% | |
| AGCATAACACATTCAATACC+AGG | + | chr1.3:58698481-58698500 | None:intergenic | 35.0% | |
| AGGAGTGGAGATTAAAACAT+CGG | + | chr1.3:58693906-58693925 | None:intergenic | 35.0% | |
| AGTGGTCAAGAATTTGAACT+TGG | - | chr1.3:58695832-58695851 | MS.gene90359:intron | 35.0% | |
| ATACCTCAAGAATATGGAGA+CGG | + | chr1.3:58696394-58696413 | None:intergenic | 35.0% | |
| ATCCACCTCAAACACAAAAT+AGG | + | chr1.3:58697879-58697898 | None:intergenic | 35.0% | |
| ATTATTTCCCATTGCATCTC+TGG | + | chr1.3:58698845-58698864 | None:intergenic | 35.0% | |
| ATTCTGAATTCGGAGTAGTA+AGG | - | chr1.3:58696961-58696980 | MS.gene90359:intron | 35.0% | |
| CAAAACAACAAAAGAGGCAA+GGG | - | chr1.3:58698804-58698823 | MS.gene90359:intron | 35.0% | |
| CAAGGAAAATCTAAATGCCA+AGG | + | chr1.3:58697436-58697455 | None:intergenic | 35.0% | |
| CAGTTGAATCTTTACGGTAT+AGG | - | chr1.3:58697576-58697595 | MS.gene90359:intron | 35.0% | |
| CCAAACTAGAATGATAGAGA+GGG | + | chr1.3:58696329-58696348 | None:intergenic | 35.0% | |
| CCCAAATATAGAAAAGAAGG+CGG | + | chr1.3:58695445-58695464 | None:intergenic | 35.0% | |
| CGTTTAAGAACACAAGGATT+TGG | + | chr1.3:58696726-58696745 | None:intergenic | 35.0% | |
| GACAGGATACAGATAAGAAT+AGG | - | chr1.3:58697780-58697799 | MS.gene90359:intron | 35.0% | |
| GAGCATAGAAATTGAAACAG+GGG | + | chr1.3:58693079-58693098 | None:intergenic | 35.0% | |
| GATGTAGAGCAACTTATCAT+TGG | + | chr1.3:58695617-58695636 | None:intergenic | 35.0% | |
| GATTAGAAATGGTCAATACC+GGG | - | chr1.3:58693321-58693340 | MS.gene90359:intron | 35.0% | |
| GCACCTAAGGAAAATATTGT+TGG | - | chr1.3:58696900-58696919 | MS.gene90359:intron | 35.0% | |
| GCATAACACATTCAATACCA+GGG | + | chr1.3:58698480-58698499 | None:intergenic | 35.0% | |
| GGAACGGTACAAGTTTAATA+TGG | - | chr1.3:58698016-58698035 | MS.gene90359:CDS | 35.0% | |
| GGATTAGAAATGGTCAATAC+CGG | - | chr1.3:58693320-58693339 | MS.gene90359:intron | 35.0% | |
| GTATCAAAAAAACCGCACAA+AGG | - | chr1.3:58699133-58699152 | MS.gene90359:CDS | 35.0% | |
| GTGTGCATTAGATAGGAATA+GGG | + | chr1.3:58697914-58697933 | None:intergenic | 35.0% | |
| TAAAGATTCAACTGCACTCT+TGG | + | chr1.3:58697570-58697589 | None:intergenic | 35.0% | |
| TACAGATAAGAATAGGAACC+GGG | - | chr1.3:58697787-58697806 | MS.gene90359:intron | 35.0% | |
| TACATGTCATACACTGATGT+TGG | - | chr1.3:58696031-58696050 | MS.gene90359:intron | 35.0% | |
| TACTGAGTTAGACAAACACT+TGG | + | chr1.3:58693939-58693958 | None:intergenic | 35.0% | |
| TAGAAACCTACAAGGAAACA+AGG | + | chr1.3:58697454-58697473 | None:intergenic | 35.0% | |
| TGGGAAATAATAATCACCGA+CGG | - | chr1.3:58698854-58698873 | MS.gene90359:intron | 35.0% | |
| TGTGTGCATTAGATAGGAAT+AGG | + | chr1.3:58697915-58697934 | None:intergenic | 35.0% | |
| TTCTGAATTCGGAGTAGTAA+GGG | - | chr1.3:58696962-58696981 | MS.gene90359:intron | 35.0% | |
| TTCTTATCTGTATCCTGTCA+TGG | + | chr1.3:58697779-58697798 | None:intergenic | 35.0% | |
| TTCTTATGTCTGCAACATCA+AGG | - | chr1.3:58694763-58694782 | MS.gene90359:intron | 35.0% | |
| TTTCATCAGGAATTCAATGC+CGG | - | chr1.3:58696822-58696841 | MS.gene90359:intron | 35.0% | |
| TTTGTCTAACTCAGTACTTC+AGG | - | chr1.3:58693943-58693962 | MS.gene90359:intron | 35.0% | |
| ! | AAATTTACTTGGTGGAGAAG+AGG | + | chr1.3:58697330-58697349 | None:intergenic | 35.0% |
| ! | AACCTATTTTGTGTTTGAGG+TGG | - | chr1.3:58697874-58697893 | MS.gene90359:intron | 35.0% |
| ! | ACCGCCTTCTTTTCTATATT+TGG | - | chr1.3:58695441-58695460 | MS.gene90359:intron | 35.0% |
| ! | CCGCCTTCTTTTCTATATTT+GGG | - | chr1.3:58695442-58695461 | MS.gene90359:intron | 35.0% |
| ! | GCCTTTTCTTGATTTTCTCT+TGG | + | chr1.3:58698884-58698903 | None:intergenic | 35.0% |
| ! | GTTTTTCCATTTTAGGCTGA+CGG | - | chr1.3:58698562-58698581 | MS.gene90359:intron | 35.0% |
| ! | TAAAAGTGTATCAGCTACAC+AGG | + | chr1.3:58695554-58695573 | None:intergenic | 35.0% |
| !! | ATTCTAGTTTGGGATCAAGT+CGG | - | chr1.3:58696337-58696356 | MS.gene90359:CDS | 35.0% |
| !! | ATTTGAGTTTTGCTCAACTC+AGG | - | chr1.3:58696175-58696194 | MS.gene90359:intron | 35.0% |
| !! | CATTTATAGTTTTGCACCTG+AGG | - | chr1.3:58696257-58696276 | MS.gene90359:CDS | 35.0% |
| !! | CCTCTCTATCATTCTAGTTT+GGG | - | chr1.3:58696327-58696346 | MS.gene90359:CDS | 35.0% |
| !! | CTTTCTGACATGTTTTTGTC+TGG | - | chr1.3:58697035-58697054 | MS.gene90359:intron | 35.0% |
| !! | GATGATTGACATTGTTTTGC+AGG | - | chr1.3:58698366-58698385 | MS.gene90359:intron | 35.0% |
| !! | GATTTTCCTTGTTTCCTTGT+AGG | - | chr1.3:58697445-58697464 | MS.gene90359:intron | 35.0% |
| !! | GTAAACAGTTTCTGAAGCAA+TGG | + | chr1.3:58692975-58692994 | None:intergenic | 35.0% |
| !! | TCTAATCCGTGTTGTTCTTT+TGG | - | chr1.3:58697383-58697402 | MS.gene90359:intron | 35.0% |
| !! | TGAAACTCTAGTTCTTGATG+AGG | - | chr1.3:58693988-58694007 | MS.gene90359:intron | 35.0% |
| !!! | CAAACTTTTAAGGCTCTGTT+TGG | + | chr1.3:58698179-58698198 | None:intergenic | 35.0% |
| !!! | CCTATTTTGTTTTTGAGGTG+GGG | - | chr1.3:58697955-58697974 | MS.gene90359:CDS | 35.0% |
| !!! | GACGGATTACAATTTTCTTC+AGG | - | chr1.3:58699111-58699130 | MS.gene90359:CDS | 35.0% |
| !!! | GATTATTTTGGATACCGATC+AGG | + | chr1.3:58694657-58694676 | None:intergenic | 35.0% |
| AAGCTTACCAGAGATGCAAT+GGG | - | chr1.3:58698835-58698854 | MS.gene90359:intron | 40.0% | |
| AATGCCAAGGTAATGTAGCT+TGG | + | chr1.3:58697423-58697442 | None:intergenic | 40.0% | |
| ACATCCAAGCTACATTACCT+TGG | - | chr1.3:58697416-58697435 | MS.gene90359:intron | 40.0% | |
| ACCTAACAGGTTTATGCACT+CGG | - | chr1.3:58695768-58695787 | MS.gene90359:intron | 40.0% | |
| ATACTGTGTGCGCATTAGAT+AGG | + | chr1.3:58697842-58697861 | None:intergenic | 40.0% | |
| ATATGAACCTACTCAAGTGC+TGG | + | chr1.3:58693779-58693798 | None:intergenic | 40.0% | |
| ATGCTGTGTGTGCATTAGAT+AGG | + | chr1.3:58698055-58698074 | None:intergenic | 40.0% | |
| CAGACTAATCCAAGAGACTT+AGG | - | chr1.3:58698593-58698612 | MS.gene90359:intron | 40.0% | |
| CCAAAATGGTGTGCTAATCA+TGG | + | chr1.3:58693302-58693321 | None:intergenic | 40.0% | |
| CCCAAACTAGAATGATAGAG+AGG | + | chr1.3:58696330-58696349 | None:intergenic | 40.0% | |
| CCCCACCTCAAAAACAAAAT+AGG | + | chr1.3:58697958-58697977 | None:intergenic | 40.0% | |
| CGTCTTACCTTCAGAATCAA+TGG | + | chr1.3:58692902-58692921 | None:intergenic | 40.0% | |
| CTCATCTGTAGAAACCTACA+AGG | + | chr1.3:58697462-58697481 | None:intergenic | 40.0% | |
| GGAAATAATAATCACCGACG+GGG | - | chr1.3:58698856-58698875 | MS.gene90359:intron | 40.0% | |
| GGAGTGGAGATTAAAACATC+GGG | + | chr1.3:58693905-58693924 | None:intergenic | 40.0% | |
| GGGAAATAATAATCACCGAC+GGG | - | chr1.3:58698855-58698874 | MS.gene90359:intron | 40.0% | |
| GGTCATGGAACATAGACAAT+TGG | + | chr1.3:58694636-58694655 | None:intergenic | 40.0% | |
| GGTGCAAGAACGAAAACATT+AGG | + | chr1.3:58693026-58693045 | None:intergenic | 40.0% | |
| GTAGGTTTCTACAGATGAGA+TGG | - | chr1.3:58697463-58697482 | MS.gene90359:intron | 40.0% | |
| GTTGGGGACAATGAAAACAA+TGG | - | chr1.3:58697512-58697531 | MS.gene90359:intron | 40.0% | |
| TAAGCTTACCAGAGATGCAA+TGG | - | chr1.3:58698834-58698853 | MS.gene90359:intron | 40.0% | |
| TACCAAAAGAAAGACGGAAG+TGG | + | chr1.3:58696427-58696446 | None:intergenic | 40.0% | |
| TACCTCAAGAATATGGAGAC+GGG | + | chr1.3:58696393-58696412 | None:intergenic | 40.0% | |
| TAGAGCAACTTATCATTGGC+AGG | + | chr1.3:58695613-58695632 | None:intergenic | 40.0% | |
| TAGGAACGTGTCATAGAACT+GGG | + | chr1.3:58696478-58696497 | None:intergenic | 40.0% | |
| TCTATGTTCCATGACCTGAT+CGG | - | chr1.3:58694640-58694659 | MS.gene90359:intron | 40.0% | |
| TCTGAATTCGGAGTAGTAAG+GGG | - | chr1.3:58696963-58696982 | MS.gene90359:intron | 40.0% | |
| TGCTCACTCCAAAGAAAATG+AGG | + | chr1.3:58693526-58693545 | None:intergenic | 40.0% | |
| TGTGCGCATTAGATAGGAAT+GGG | + | chr1.3:58697836-58697855 | None:intergenic | 40.0% | |
| TTCAACTGCACAACTTTGAG+CGG | + | chr1.3:58693213-58693232 | None:intergenic | 40.0% | |
| TTCAGGCAGAGTCAAGATAA+CGG | + | chr1.3:58695252-58695271 | None:intergenic | 40.0% | |
| TTCTGGTACTTCTATCTCCT+TGG | - | chr1.3:58697266-58697285 | MS.gene90359:intron | 40.0% | |
| TTGCAGACATAAGAAGACAC+TGG | + | chr1.3:58694758-58694777 | None:intergenic | 40.0% | |
| ! | AAAACAAAGGTGTGGAGGAA+TGG | + | chr1.3:58698547-58698566 | None:intergenic | 40.0% |
| ! | AGCAAATGTTTTGCCAGAAC+CGG | + | chr1.3:58692943-58692962 | None:intergenic | 40.0% |
| ! | ATCCACTTCCGTCTTTCTTT+TGG | - | chr1.3:58696422-58696441 | MS.gene90359:intron | 40.0% |
| ! | ATGGAAAAACAAAGGTGTGG+AGG | + | chr1.3:58698552-58698571 | None:intergenic | 40.0% |
| ! | CAATATGCTTGCTACTGACT+TGG | - | chr1.3:58693236-58693255 | MS.gene90359:intron | 40.0% |
| ! | CCATGATTAGCACACCATTT+TGG | - | chr1.3:58693299-58693318 | MS.gene90359:intron | 40.0% |
| ! | CCCTCTCTATCATTCTAGTT+TGG | - | chr1.3:58696326-58696345 | MS.gene90359:CDS | 40.0% |
| !! | TGCGATTCCATTGATTCTGA+AGG | - | chr1.3:58692892-58692911 | MS.gene90359:intron | 40.0% |
| AAACACTTGGCTATGCAAGC+AGG | + | chr1.3:58693926-58693945 | None:intergenic | 45.0% | |
| AACAAAAGAGGCAAGGGCAA+TGG | - | chr1.3:58698810-58698829 | MS.gene90359:intron | 45.0% | |
| AACTCTGCAAAGTAAGTCCC+TGG | - | chr1.3:58698460-58698479 | MS.gene90359:intron | 45.0% | |
| AACTGCACTCTTGGTGAGTA+AGG | + | chr1.3:58697561-58697580 | None:intergenic | 45.0% | |
| AAGAAGACACTGGCAACTTC+TGG | + | chr1.3:58694748-58694767 | None:intergenic | 45.0% | |
| ACGTACATCGAATGGACGTA+CGG | - | chr1.3:58697230-58697249 | MS.gene90359:CDS | 45.0% | |
| ACTCCAACTTCAACATCGCA+AGG | + | chr1.3:58695639-58695658 | None:intergenic | 45.0% | |
| ACTGCACTCTTGGTGAGTAA+GGG | + | chr1.3:58697560-58697579 | None:intergenic | 45.0% | |
| AGAAGACACTGGCAACTTCT+GGG | + | chr1.3:58694747-58694766 | None:intergenic | 45.0% | |
| AGTCGTGAACTATGTCCAAC+AGG | - | chr1.3:58693047-58693066 | MS.gene90359:CDS | 45.0% | |
| ATATGGAGACGGGAATTCTG+AGG | + | chr1.3:58696383-58696402 | None:intergenic | 45.0% | |
| ATCTTGACTCTGCCTGAAGT+GGG | - | chr1.3:58695254-58695273 | MS.gene90359:intron | 45.0% | |
| ATCTTTACGGTATAGGGCTG+AGG | - | chr1.3:58697583-58697602 | MS.gene90359:intron | 45.0% | |
| CACAGAACAAGAAGTAGACG+AGG | - | chr1.3:58692778-58692797 | MS.gene90359:CDS | 45.0% | |
| CATCCTTGCGATGTTGAAGT+TGG | - | chr1.3:58695633-58695652 | MS.gene90359:intron | 45.0% | |
| CCTAACAGGTTTATGCACTC+GGG | - | chr1.3:58695769-58695788 | MS.gene90359:intron | 45.0% | |
| CTTCAGGCAGCATCCATTAA+TGG | - | chr1.3:58693959-58693978 | MS.gene90359:intron | 45.0% | |
| GACAGATATCAGCCAGTCAA+CGG | - | chr1.3:58696866-58696885 | MS.gene90359:intron | 45.0% | |
| GACAGGATACGTACATCGAA+TGG | - | chr1.3:58697222-58697241 | MS.gene90359:CDS | 45.0% | |
| GCAAGCAATGGCAAAAGCAA+TGG | - | chr1.3:58699172-58699191 | MS.gene90359:CDS | 45.0% | |
| GCTTTCTCTTGCTGATGAAC+AGG | - | chr1.3:58697171-58697190 | MS.gene90359:intron | 45.0% | |
| GTAGGAACGTGTCATAGAAC+TGG | + | chr1.3:58696479-58696498 | None:intergenic | 45.0% | |
| GTGGAGATTAAAACATCGGG+AGG | + | chr1.3:58693902-58693921 | None:intergenic | 45.0% | |
| GTGTGCGCATTAGATAGGAA+TGG | + | chr1.3:58697837-58697856 | None:intergenic | 45.0% | |
| GTTGGACATAGTTCACGACT+CGG | + | chr1.3:58693047-58693066 | None:intergenic | 45.0% | |
| GTTTATGCACTCGGGATAGT+TGG | - | chr1.3:58695777-58695796 | MS.gene90359:intron | 45.0% | |
| TAACTGAGACAGGAACGACA+TGG | + | chr1.3:58698242-58698261 | None:intergenic | 45.0% | |
| TAGGGATGACCTCATCCTTA+CGG | + | chr1.3:58695283-58695302 | None:intergenic | 45.0% | |
| TATCTTGACTCTGCCTGAAG+TGG | - | chr1.3:58695253-58695272 | MS.gene90359:intron | 45.0% | |
| TCAGGCAGAGTCAAGATAAC+GGG | + | chr1.3:58695251-58695270 | None:intergenic | 45.0% | |
| TGCGATGTTGAAGTTGGAGT+TGG | - | chr1.3:58695639-58695658 | MS.gene90359:intron | 45.0% | |
| TGTGGTTTCGTTCGCGTTTA+CGG | + | chr1.3:58692750-58692769 | None:intergenic | 45.0% | |
| TTCCCGTCTCCATATTCTTG+AGG | - | chr1.3:58696388-58696407 | MS.gene90359:intron | 45.0% | |
| TTCGCAAGTCTAACTGAGAC+AGG | + | chr1.3:58698252-58698271 | None:intergenic | 45.0% | |
| TTTGGATACCGATCAGGTCA+TGG | + | chr1.3:58694651-58694670 | None:intergenic | 45.0% | |
| ! | AACCTAGCTCTTCGAAGCTT+CGG | + | chr1.3:58692805-58692824 | None:intergenic | 45.0% |
| ! | ATTTTCTCTTGGATCCCCGT+CGG | + | chr1.3:58698873-58698892 | None:intergenic | 45.0% |
| !! | AATAAAAATTTAAAAAATTG+AGG | + | chr1.3:58694943-58694962 | None:intergenic | 5.0% |
| AAAAGGCAGTGACCCTCTGA+TGG | - | chr1.3:58698897-58698916 | MS.gene90359:intron | 50.0% | |
| AAACAGGGGAATGCACCTGT+TGG | + | chr1.3:58693065-58693084 | None:intergenic | 50.0% | |
| AATCACGAGCCCAGGATTTG+AGG | - | chr1.3:58698425-58698444 | MS.gene90359:intron | 50.0% | |
| AATCCTGGGCTCGTGATTCT+CGG | + | chr1.3:58698423-58698442 | None:intergenic | 50.0% | |
| AGTGAGCCGTCAGCCTAAAA+TGG | + | chr1.3:58698571-58698590 | None:intergenic | 50.0% | |
| AGTGGGAAACCGTAAGGATG+AGG | - | chr1.3:58695271-58695290 | MS.gene90359:intron | 50.0% | |
| AGTGTCTCCAGCACTTGAGT+AGG | - | chr1.3:58693769-58693788 | MS.gene90359:intron | 50.0% | |
| ATAGAAAGCTGGAAGGGGCT+AGG | - | chr1.3:58693729-58693748 | MS.gene90359:intron | 50.0% | |
| CAGGCAGAGTCAAGATAACG+GGG | + | chr1.3:58695250-58695269 | None:intergenic | 50.0% | |
| CCCGAGTGCATAAACCTGTT+AGG | + | chr1.3:58695772-58695791 | None:intergenic | 50.0% | |
| CCTCATACGGTTTCCATGAC+AGG | - | chr1.3:58697763-58697782 | MS.gene90359:intron | 50.0% | |
| CCTGTCATGGAAACCGTATG+AGG | + | chr1.3:58697766-58697785 | None:intergenic | 50.0% | |
| CGTACATCGAATGGACGTAC+GGG | - | chr1.3:58697231-58697250 | MS.gene90359:CDS | 50.0% | |
| CTTCATCCTTCTCCGTTGAC+TGG | + | chr1.3:58696881-58696900 | None:intergenic | 50.0% | |
| GCAACGTGCTGAATTGGAGT+AGG | + | chr1.3:58692875-58692894 | None:intergenic | 50.0% | |
| GCGGAACTTTGCATAGCTCA+AGG | + | chr1.3:58693194-58693213 | None:intergenic | 50.0% | |
| GGAATCGCAACGTGCTGAAT+TGG | + | chr1.3:58692881-58692900 | None:intergenic | 50.0% | |
| GTACGTATCCTGTCACACTG+CGG | + | chr1.3:58697216-58697235 | None:intergenic | 50.0% | |
| TACGTATCCTGTCACACTGC+GGG | + | chr1.3:58697215-58697234 | None:intergenic | 50.0% | |
| TAGAAAGCTGGAAGGGGCTA+GGG | - | chr1.3:58693730-58693749 | MS.gene90359:intron | 50.0% | |
| TATCAGCCAGTCAACGGAGA+AGG | - | chr1.3:58696872-58696891 | MS.gene90359:intron | 50.0% | |
| TCCTTACGGTTTCCCACTTC+AGG | + | chr1.3:58695269-58695288 | None:intergenic | 50.0% | |
| TGGCAACTTCTGGGTATGTG+TGG | + | chr1.3:58694738-58694757 | None:intergenic | 50.0% | |
| TTGTTCTGTGTGCTCACGTG+TGG | + | chr1.3:58692768-58692787 | None:intergenic | 50.0% | |
| ! | ACGGGAAGAGCATACAGTTC+TGG | - | chr1.3:58697249-58697268 | MS.gene90359:CDS | 50.0% |
| ! | GGAGAAGGATGAAGCACCTA+AGG | - | chr1.3:58696887-58696906 | MS.gene90359:intron | 50.0% |
| ! | GGTAATCTGGGACATCGCAA+AGG | + | chr1.3:58698777-58698796 | None:intergenic | 50.0% |
| ACGTATCCTGTCACACTGCG+GGG | + | chr1.3:58697214-58697233 | None:intergenic | 55.0% | |
| CACTCGGGATAGTTGGCCAA+TGG | - | chr1.3:58695784-58695803 | MS.gene90359:intron | 55.0% | |
| CAGCAGAGATGGCCATCAGA+GGG | + | chr1.3:58698912-58698931 | None:intergenic | 55.0% | |
| CTCTGATGGCCATCTCTGCT+GGG | - | chr1.3:58698911-58698930 | MS.gene90359:intron | 55.0% | |
| CTTGGCTATGCAAGCAGGAG+TGG | + | chr1.3:58693921-58693940 | None:intergenic | 55.0% | |
| GACCGAAGCTTCGAAGAGCT+AGG | - | chr1.3:58692800-58692819 | MS.gene90359:CDS | 55.0% | |
| GCCTGAAGTGGGAAACCGTA+AGG | - | chr1.3:58695265-58695284 | MS.gene90359:intron | 55.0% | |
| GGATCATACCCCAGCAGAGA+TGG | + | chr1.3:58698923-58698942 | None:intergenic | 55.0% | |
| GTCGTTGCTCGTGCGAAAAC+CGG | - | chr1.3:58692921-58692940 | MS.gene90359:intron | 55.0% | |
| GTGTTTGCAGCAAGCAGCAC+TGG | - | chr1.3:58693871-58693890 | MS.gene90359:intron | 55.0% | |
| GTTCGCGTTTACGGTTGCTC+CGG | + | chr1.3:58692741-58692760 | None:intergenic | 55.0% | |
| TCAGACTGGTGGAAGCAGTG+TGG | + | chr1.3:58696236-58696255 | None:intergenic | 55.0% | |
| TCTGATGGCCATCTCTGCTG+GGG | - | chr1.3:58698912-58698931 | MS.gene90359:intron | 55.0% | |
| TGGTGGAAGCAGTGTGGTTG+AGG | + | chr1.3:58696230-58696249 | None:intergenic | 55.0% | |
| ! | ACATCGCAAAGGTGTGGAGG+AGG | + | chr1.3:58698766-58698785 | None:intergenic | 55.0% |
| ! | TCTGGGACATCGCAAAGGTG+TGG | + | chr1.3:58698772-58698791 | None:intergenic | 55.0% |
| !! | TGCAGCAAGCAGCACTGGTT+GGG | - | chr1.3:58693876-58693895 | MS.gene90359:intron | 55.0% |
| !! | TTGCAGCAAGCAGCACTGGT+TGG | - | chr1.3:58693875-58693894 | MS.gene90359:intron | 55.0% |
| CCAGCAGAGATGGCCATCAG+AGG | + | chr1.3:58698913-58698932 | None:intergenic | 60.0% | |
| CCTCTGATGGCCATCTCTGC+TGG | - | chr1.3:58698910-58698929 | MS.gene90359:intron | 60.0% | |
| GAAATGCCCCGCAGTGTGAC+AGG | - | chr1.3:58697205-58697224 | MS.gene90359:CDS | 60.0% | |
| GAAGGGGCTAGGGTCAGTGT+AGG | - | chr1.3:58693740-58693759 | MS.gene90359:intron | 60.0% | |
| TGTCCGAGAATCACGAGCCC+AGG | - | chr1.3:58698417-58698436 | MS.gene90359:intron | 60.0% | |
| ! | GCAAAGGTGTGGAGGAGGAG+CGG | + | chr1.3:58698761-58698780 | None:intergenic | 60.0% |
| ! | GCTCGTGCGAAAACCGGTTC+TGG | - | chr1.3:58692927-58692946 | MS.gene90359:intron | 60.0% |
| ! | GGGACATCGCAAAGGTGTGG+AGG | + | chr1.3:58698769-58698788 | None:intergenic | 60.0% |
| CGCGTTTACGGTTGCTCCGG+CGG | + | chr1.3:58692738-58692757 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 58692731 | 58699231 | 58692731 | ID=MS.gene90359 |
| chr1.3 | mRNA | 58692731 | 58699231 | 58692731 | ID=MS.gene90359.t1;Parent=MS.gene90359 |
| chr1.3 | exon | 58699049 | 58699231 | 58699049 | ID=MS.gene90359.t1.exon1;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58699049 | 58699231 | 58699049 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58698705 | 58698794 | 58698705 | ID=MS.gene90359.t1.exon2;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58698705 | 58698794 | 58698705 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58697953 | 58698081 | 58697953 | ID=MS.gene90359.t1.exon3;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58697953 | 58698081 | 58697953 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58697178 | 58697278 | 58697178 | ID=MS.gene90359.t1.exon4;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58697178 | 58697278 | 58697178 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58696640 | 58696754 | 58696640 | ID=MS.gene90359.t1.exon5;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58696640 | 58696754 | 58696640 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58696230 | 58696361 | 58696230 | ID=MS.gene90359.t1.exon6;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58696230 | 58696361 | 58696230 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58695553 | 58695618 | 58695553 | ID=MS.gene90359.t1.exon7;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58695553 | 58695618 | 58695553 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58694952 | 58695131 | 58694952 | ID=MS.gene90359.t1.exon8;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58694952 | 58695131 | 58694952 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58694692 | 58694769 | 58694692 | ID=MS.gene90359.t1.exon9;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58694692 | 58694769 | 58694692 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58694358 | 58694495 | 58694358 | ID=MS.gene90359.t1.exon10;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58694358 | 58694495 | 58694358 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58693492 | 58693574 | 58693492 | ID=MS.gene90359.t1.exon11;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58693492 | 58693574 | 58693492 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58693348 | 58693385 | 58693348 | ID=MS.gene90359.t1.exon12;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58693348 | 58693385 | 58693348 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58693029 | 58693237 | 58693029 | ID=MS.gene90359.t1.exon13;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58693029 | 58693237 | 58693029 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| chr1.3 | exon | 58692731 | 58692829 | 58692731 | ID=MS.gene90359.t1.exon14;Parent=MS.gene90359.t1 |
| chr1.3 | CDS | 58692731 | 58692829 | 58692731 | ID=cds.MS.gene90359.t1;Parent=MS.gene90359.t1 |
| Gene Sequence |
| Protein sequence |