AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene071456

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071456.t1 MTR_1g083130 95.637 573 19 1 1 567 1 573 0.0 1113
MS.gene071456.t1 MTR_3g049990 31.220 410 229 9 26 427 152 516 5.25e-47 176
MS.gene071456.t1 MTR_7g056830 30.714 420 230 11 18 427 2 370 1.11e-46 169
MS.gene071456.t1 MTR_6g082080 30.476 420 231 11 18 427 2 370 6.27e-46 167
MS.gene071456.t1 MTR_2g041140 29.436 479 274 13 26 486 141 573 1.33e-44 169
MS.gene071456.t1 MTR_7g109720 29.639 415 241 9 25 431 231 602 2.41e-44 168
MS.gene071456.t1 MTR_3g449250 27.523 436 254 9 22 450 86 466 1.19e-37 147
MS.gene071456.t1 MTR_3g449250 27.523 436 254 9 22 450 86 466 2.33e-37 146
MS.gene071456.t1 MTR_6g005550 28.537 410 205 13 26 410 165 511 9.73e-36 142
MS.gene071456.t1 MTR_4g134170 27.907 430 235 10 25 426 286 668 1.74e-35 142
MS.gene071456.t1 MTR_2g032630 28.607 402 227 11 26 416 496 848 7.57e-35 140
MS.gene071456.t1 MTR_2g007000 27.136 398 241 7 25 415 503 858 2.34e-34 139
MS.gene071456.t1 MTR_5g090120 26.573 429 245 10 15 427 70 444 3.22e-34 137
MS.gene071456.t1 MTR_2g066050 27.361 413 238 9 26 426 53 415 4.29e-34 135
MS.gene071456.t1 MTR_3g467550 26.415 424 249 8 26 432 117 494 6.58e-34 136
MS.gene071456.t1 MTR_7g057250 25.568 528 270 19 18 471 153 631 6.65e-34 137
MS.gene071456.t1 MTR_2g438110 24.439 446 269 10 6 442 14 400 2.25e-33 132
MS.gene071456.t1 MTR_7g076820 27.561 410 239 9 13 415 136 494 2.93e-33 133
MS.gene071456.t1 MTR_4g114120 27.818 417 227 11 27 416 141 510 4.09e-33 134
MS.gene071456.t1 MTR_6g005320 27.674 430 234 12 25 426 248 628 4.54e-33 134
MS.gene071456.t1 MTR_3g467550 27.047 403 231 8 47 432 107 463 9.04e-33 132
MS.gene071456.t1 MTR_7g076800 26.829 410 242 9 13 415 127 485 3.70e-32 130
MS.gene071456.t1 MTR_7g076830 26.829 410 242 9 13 415 129 487 4.11e-32 130
MS.gene071456.t1 MTR_2g100230 25.806 434 260 8 25 447 95 477 8.21e-32 129
MS.gene071456.t1 MTR_8g027770 26.573 429 260 9 4 415 176 566 1.08e-31 130
MS.gene071456.t1 MTR_7g100820 29.263 434 236 13 25 442 129 507 1.59e-31 129
MS.gene071456.t1 MTR_2g039960 25.917 409 242 8 26 425 41 397 5.97e-31 125
MS.gene071456.t1 MTR_8g018400 25.183 409 245 8 26 425 41 397 2.12e-30 123
MS.gene071456.t1 MTR_4g059460 27.651 481 250 20 26 443 44 489 4.34e-30 125
MS.gene071456.t1 MTR_3g083690 26.471 408 236 10 26 412 145 509 6.32e-30 124
MS.gene071456.t1 MTR_4g125970 25.672 409 243 8 26 425 41 397 3.63e-29 120
MS.gene071456.t1 MTR_2g043360 27.235 481 252 20 26 443 41 486 3.86e-29 122
MS.gene071456.t1 MTR_1g054630 27.594 424 237 11 11 412 142 517 7.53e-29 121
MS.gene071456.t1 MTR_2g099620 25.183 409 245 8 26 425 41 397 1.08e-28 119
MS.gene071456.t1 MTR_4g125970 25.672 409 243 8 26 425 58 414 1.11e-28 119
MS.gene071456.t1 MTR_2g099620 25.542 415 246 9 20 425 21 381 1.16e-28 118
MS.gene071456.t1 MTR_4g105100 26.683 401 233 8 25 413 201 552 1.23e-28 120
MS.gene071456.t1 MTR_1g095810 25.180 417 235 13 25 418 144 506 2.39e-28 119
MS.gene071456.t1 MTR_6g039840 26.698 427 248 11 26 431 110 492 2.79e-28 120
MS.gene071456.t1 MTR_8g027775 26.108 406 248 8 24 415 100 467 6.91e-28 118
MS.gene071456.t1 MTR_4g068990 25.829 422 238 13 27 424 69 439 1.29e-27 118
MS.gene071456.t1 MTR_1g026830 24.821 419 234 12 25 418 146 508 3.00e-27 116
MS.gene071456.t1 MTR_4g079320 25.815 399 241 11 26 416 19 370 3.13e-27 117
MS.gene071456.t1 MTR_5g092560 25.369 406 245 10 31 424 81 440 1.32e-26 115
MS.gene071456.t1 MTR_5g027840 26.168 428 254 11 2 412 75 457 5.20e-26 112
MS.gene071456.t1 MTR_8g097000 25.783 415 252 11 27 425 289 663 2.32e-25 111
MS.gene071456.t1 MTR_8g027780 25.123 406 252 8 24 415 104 471 4.02e-25 110
MS.gene071456.t1 MTR_2g055850 25.628 398 217 12 26 401 91 431 6.30e-25 109
MS.gene071456.t1 MTR_5g069330 26.478 423 236 15 22 427 3 367 1.31e-24 107
MS.gene071456.t1 MTR_6g033070 25.666 413 240 13 26 422 140 501 2.24e-24 107
MS.gene071456.t1 MTR_3g107420 24.887 442 248 13 4 424 28 406 2.62e-24 106
MS.gene071456.t1 MTR_3g118120 25.547 411 227 13 25 401 131 496 3.67e-24 106
MS.gene071456.t1 MTR_5g069330 26.429 420 234 15 25 427 2 363 3.93e-24 105
MS.gene071456.t1 MTR_6g056080 26.247 381 229 9 40 410 117 455 4.51e-24 107
MS.gene071456.t1 MTR_1g012420 23.874 444 254 13 2 424 26 406 1.89e-23 103
MS.gene071456.t1 MTR_4g010565 25.000 408 226 11 26 413 124 471 3.74e-23 103
MS.gene071456.t1 MTR_2g063080 24.385 447 244 9 25 416 108 515 8.71e-23 102
MS.gene071456.t1 MTR_1g102410 25.000 428 235 13 18 410 36 412 1.42e-21 99.4
MS.gene071456.t1 MTR_3g467550 25.132 378 220 8 26 386 117 448 1.47e-21 98.2
MS.gene071456.t1 MTR_4g049910 24.444 405 236 10 26 411 55 408 6.21e-21 96.3
MS.gene071456.t1 MTR_8g079462 28.311 219 116 4 207 422 87 267 1.13e-20 93.6
MS.gene071456.t1 MTR_4g112340 22.252 373 238 7 38 401 109 438 4.62e-20 94.4
MS.gene071456.t1 MTR_0915s0010 27.090 299 194 7 39 331 2 282 4.28e-19 88.2
MS.gene071456.t1 MTR_8g027780 25.846 325 222 7 24 334 104 423 5.98e-19 90.1
MS.gene071456.t1 MTR_3g071620 24.105 419 239 10 36 423 26 396 1.82e-18 89.4
MS.gene071456.t1 MTR_8g032230 35.099 151 92 2 18 168 2 146 5.60e-18 82.0
MS.gene071456.t1 MTR_4g105100 26.398 322 209 7 25 334 201 506 3.00e-17 85.5
MS.gene071456.t1 MTR_4g077370 32.524 206 123 5 22 220 246 442 1.29e-16 82.8
MS.gene071456.t1 MTR_4g077370 31.401 207 106 7 26 224 2 180 1.50e-11 67.0
MS.gene071456.t1 MTR_4g131750 23.188 414 240 12 48 426 104 474 1.59e-14 76.6
MS.gene071456.t1 MTR_8g062720 32.667 150 86 4 22 161 87 231 3.38e-14 75.9
MS.gene071456.t1 MTR_4g459350 32.353 170 103 6 26 190 41 203 7.35e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071456.t1 AT4G34910 67.029 552 165 5 25 560 46 596 0.0 686
MS.gene071456.t1 AT5G60990 28.842 475 270 12 18 478 2 422 3.75e-46 169
MS.gene071456.t1 AT4G16630 30.976 410 230 9 26 427 168 532 4.52e-45 171
MS.gene071456.t1 AT2G47330 29.496 417 239 11 25 431 228 599 3.74e-40 156
MS.gene071456.t1 AT5G26742 28.538 424 245 9 16 427 93 470 1.10e-38 151
MS.gene071456.t1 AT5G26742 28.538 424 245 9 16 427 93 470 1.10e-38 151
MS.gene071456.t1 AT3G09720 30.392 408 213 12 25 416 137 489 2.06e-38 149
MS.gene071456.t1 AT3G09720 30.392 408 213 12 25 416 137 489 2.06e-38 149
MS.gene071456.t1 AT2G33730 27.674 430 236 10 25 426 313 695 2.95e-37 147
MS.gene071456.t1 AT2G40700 27.976 504 264 19 9 443 5 478 2.05e-36 144
MS.gene071456.t1 AT3G22310 26.777 422 239 11 26 431 117 484 2.36e-35 140
MS.gene071456.t1 AT3G22330 26.512 430 245 12 3 415 81 456 2.49e-35 140
MS.gene071456.t1 AT3G22310 26.777 422 239 11 26 431 117 484 2.67e-35 140
MS.gene071456.t1 AT3G01540 28.250 400 223 11 26 412 159 507 3.42e-35 140
MS.gene071456.t1 AT3G01540 28.250 400 223 11 26 412 159 507 3.75e-35 140
MS.gene071456.t1 AT3G01540 28.250 400 223 11 26 412 159 507 3.75e-35 140
MS.gene071456.t1 AT3G01540 28.250 400 223 11 26 412 159 507 3.75e-35 140
MS.gene071456.t1 AT5G26742 28.535 389 219 10 51 427 36 377 1.03e-34 139
MS.gene071456.t1 AT4G00660 27.184 412 238 10 13 415 118 476 2.19e-34 136
MS.gene071456.t1 AT4G00660 27.184 412 238 10 13 415 118 476 2.19e-34 136
MS.gene071456.t1 AT1G20920 26.010 396 244 7 27 415 531 884 4.44e-34 138
MS.gene071456.t1 AT1G20920 26.010 396 244 7 27 415 531 884 4.44e-34 138
MS.gene071456.t1 AT1G20920 26.010 396 244 7 27 415 531 884 4.44e-34 138
MS.gene071456.t1 AT1G20920 26.010 396 244 7 27 415 531 884 4.44e-34 138
MS.gene071456.t1 AT1G20920 26.010 396 244 7 27 415 531 884 4.44e-34 138
MS.gene071456.t1 AT1G20920 26.010 396 244 7 27 415 531 884 4.44e-34 138
MS.gene071456.t1 AT5G14610 27.723 404 216 11 26 410 162 508 7.38e-34 136
MS.gene071456.t1 AT5G14610 27.723 404 216 11 26 410 162 508 8.13e-34 136
MS.gene071456.t1 AT5G14610 28.079 406 216 11 26 412 170 518 9.08e-34 136
MS.gene071456.t1 AT1G20920 26.010 396 244 7 27 415 193 546 1.57e-33 136
MS.gene071456.t1 AT1G16280 27.494 411 242 9 26 427 59 422 2.05e-33 134
MS.gene071456.t1 AT2G45810 27.595 395 229 8 27 415 156 499 2.81e-33 134
MS.gene071456.t1 AT3G06480 29.032 403 224 12 26 416 436 788 4.40e-33 135
MS.gene071456.t1 AT2G42520 27.451 408 231 11 26 412 160 523 7.38e-33 134
MS.gene071456.t1 AT2G42520 27.451 408 231 11 26 412 160 523 7.38e-33 134
MS.gene071456.t1 AT2G42520 27.451 408 231 11 26 412 160 523 7.38e-33 134
MS.gene071456.t1 AT1G55150 26.683 401 231 8 25 412 99 449 1.82e-32 131
MS.gene071456.t1 AT3G61240 26.582 395 233 8 27 415 126 469 7.17e-32 129
MS.gene071456.t1 AT3G61240 26.582 395 233 8 27 415 126 469 7.17e-32 129
MS.gene071456.t1 AT1G55150 26.683 401 231 8 25 412 124 474 7.57e-32 129
MS.gene071456.t1 AT3G09620 26.250 400 209 11 27 415 399 723 3.13e-31 129
MS.gene071456.t1 AT3G09620 26.250 400 209 11 27 415 398 722 3.24e-31 129
MS.gene071456.t1 AT3G13920 26.150 413 244 8 22 425 36 396 8.79e-31 124
MS.gene071456.t1 AT1G54270 26.406 409 240 8 26 425 40 396 9.68e-31 124
MS.gene071456.t1 AT3G13920 26.150 413 244 8 22 425 26 386 1.28e-30 124
MS.gene071456.t1 AT1G31970 28.307 378 215 9 43 407 132 466 1.74e-30 125
MS.gene071456.t1 AT3G13920 26.551 403 235 8 22 415 36 386 2.80e-30 123
MS.gene071456.t1 AT3G13920 26.551 403 235 8 22 415 40 390 2.85e-30 123
MS.gene071456.t1 AT5G14610 27.865 384 201 11 48 412 53 379 5.31e-30 124
MS.gene071456.t1 AT5G14610 27.865 384 201 11 48 412 53 379 5.31e-30 124
MS.gene071456.t1 AT5G14610 27.340 406 214 12 31 412 230 578 6.44e-30 125
MS.gene071456.t1 AT5G63120 26.108 406 227 8 27 414 167 517 9.64e-30 124
MS.gene071456.t1 AT5G65900 27.407 405 228 12 24 413 153 506 1.10e-29 124
MS.gene071456.t1 AT3G19760 23.404 423 262 8 26 442 36 402 1.19e-29 121
MS.gene071456.t1 AT3G13920 26.150 413 239 9 22 425 36 391 2.75e-29 120
MS.gene071456.t1 AT1G54270 26.406 409 235 9 26 425 40 391 3.84e-29 120
MS.gene071456.t1 AT3G16840 24.295 461 245 13 26 419 191 614 4.08e-29 123
MS.gene071456.t1 AT3G16840 24.295 461 245 13 26 419 192 615 4.27e-29 123
MS.gene071456.t1 AT1G72730 25.183 409 245 9 26 425 42 398 6.10e-29 119
MS.gene071456.t1 AT5G08610 25.408 429 268 12 2 415 357 748 1.50e-28 121
MS.gene071456.t1 AT3G58510 25.591 465 256 14 26 470 152 546 1.83e-28 120
MS.gene071456.t1 AT3G58510 25.591 465 256 14 26 470 152 546 1.83e-28 120
MS.gene071456.t1 AT3G58510 25.591 465 256 14 26 470 152 546 1.83e-28 120
MS.gene071456.t1 AT3G58570 25.735 408 238 11 26 412 147 510 3.34e-28 119
MS.gene071456.t1 AT5G51280 26.024 415 234 14 25 418 146 508 8.70e-28 118
MS.gene071456.t1 AT5G08620 25.185 405 247 10 27 415 82 446 2.26e-27 116
MS.gene071456.t1 AT1G51380 23.729 413 252 11 25 427 22 381 9.52e-27 112
MS.gene071456.t1 AT1G77030 26.536 407 226 12 27 416 30 380 1.31e-26 115
MS.gene071456.t1 AT4G09730 27.361 413 234 12 26 416 113 481 1.37e-26 114
MS.gene071456.t1 AT5G54910 24.641 418 242 13 25 423 71 434 2.63e-26 114
MS.gene071456.t1 AT4G33370 26.456 412 230 14 25 415 97 456 2.83e-26 113
MS.gene071456.t1 AT1G28180 27.321 377 213 9 55 419 3 330 1.45e-25 108
MS.gene071456.t1 AT3G18600 25.389 386 231 10 26 401 90 428 3.08e-25 110
MS.gene071456.t1 AT3G02065 25.243 412 244 10 26 422 111 473 6.31e-25 108
MS.gene071456.t1 AT3G02065 25.243 412 244 10 26 422 111 473 6.31e-25 108
MS.gene071456.t1 AT1G12770 25.439 456 227 12 25 416 110 516 1.18e-24 108
MS.gene071456.t1 AT1G12770 25.439 456 227 12 25 416 110 516 1.18e-24 108
MS.gene071456.t1 AT5G63630 23.918 439 254 10 1 415 232 614 2.76e-24 107
MS.gene071456.t1 AT3G06980 25.428 409 229 13 25 401 374 738 6.30e-24 107
MS.gene071456.t1 AT5G63630 23.918 439 254 10 1 415 38 420 7.57e-24 105
MS.gene071456.t1 AT5G14610 28.659 328 191 10 26 334 170 473 9.42e-24 105
MS.gene071456.t1 AT5G62190 26.214 412 230 11 20 410 91 449 2.67e-23 104
MS.gene071456.t1 AT5G11170 24.020 408 230 12 26 413 47 394 3.54e-23 102
MS.gene071456.t1 AT5G11200 24.020 408 230 12 26 413 47 394 3.54e-23 102
MS.gene071456.t1 AT3G06480 29.907 321 196 11 26 334 436 739 4.78e-22 101
MS.gene071456.t1 AT3G53110 24.062 453 258 16 27 447 93 491 6.84e-22 99.8
MS.gene071456.t1 AT1G63250 23.206 418 260 8 25 423 328 703 6.25e-21 97.8
MS.gene071456.t1 AT3G02065 24.543 383 225 10 55 422 3 336 9.84e-21 94.7
MS.gene071456.t1 AT2G07750 23.333 420 261 8 25 425 375 752 1.15e-20 97.1
MS.gene071456.t1 AT5G63120 26.687 326 199 7 27 334 167 470 1.39e-19 92.4
MS.gene071456.t1 AT5G63120 26.687 326 199 7 27 334 167 470 1.41e-19 92.4
MS.gene071456.t1 AT5G63120 26.687 326 199 7 27 334 167 470 1.41e-19 92.4
MS.gene071456.t1 AT5G63120 26.687 326 199 7 27 334 167 470 1.41e-19 92.4
MS.gene071456.t1 AT5G05450 23.798 416 249 10 32 423 23 394 2.85e-19 92.0
MS.gene071456.t1 AT1G71370 23.301 412 259 10 27 423 16 385 5.45e-17 84.7
MS.gene071456.t1 AT1G51380 24.436 266 177 8 25 283 22 270 6.73e-15 75.9
MS.gene071456.t1 AT1G51380 25.688 218 144 7 25 235 22 228 3.86e-12 67.8
MS.gene071456.t1 AT1G51380 25.688 218 144 7 25 235 22 228 5.96e-12 67.4
MS.gene071456.t1 AT1G59990 32.215 149 87 2 22 161 77 220 7.23e-12 68.6
MS.gene071456.t1 AT1G59990 32.215 149 87 2 22 161 77 220 8.27e-12 68.6
MS.gene071456.t1 AT1G71280 29.630 216 126 7 27 230 17 218 1.28e-11 67.4
MS.gene071456.t1 AT1G71280 29.493 217 125 8 27 230 17 218 5.08e-11 64.7

Find 126 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTGATGGCCATCTCTGC+TGG 0.215369 1.3:-58681048 MS.gene071456:CDS
AAGAAGACACTGGCAACTTC+TGG 0.263713 1.3:+58685214 None:intergenic
TGAATATCAGAACTTTCTTT+TGG 0.268968 1.3:+58684297 None:intergenic
TTTCAGATTGAAACTATTCT+TGG 0.271547 1.3:-58684255 MS.gene071456:CDS
AGTTTCAAGAGAACCATTAA+TGG 0.277015 1.3:+58685984 None:intergenic
CTTCAGGCAGCATCCATTAA+TGG 0.291130 1.3:-58685997 MS.gene071456:CDS
TGTGGTTTCGTTCGCGTTTA+CGG 0.312496 1.3:+58687210 None:intergenic
CTAAAATTAGATTCTGAATT+CGG 0.328738 1.3:-58683005 MS.gene071456:CDS
AGTTTCTTCCTATCAACATT+AGG 0.332535 1.3:+58686959 None:intergenic
CAGTTGAATCTTTACGGTAT+AGG 0.338628 1.3:-58682380 MS.gene071456:CDS
TCCTTACGGTTTCCCACTTC+AGG 0.340083 1.3:+58684695 None:intergenic
GCTCGTGCGAAAACCGGTTC+TGG 0.341119 1.3:-58687028 MS.gene071456:CDS
AATTACATACCTCAAGAATA+TGG 0.342339 1.3:+58683562 None:intergenic
GGAATCGCAACGTGCTGAAT+TGG 0.348704 1.3:+58687079 None:intergenic
TGCAGCAAGCAGCACTGGTT+GGG 0.349074 1.3:-58686080 MS.gene071456:intron
ATTATTTCCCATTGCATCTC+TGG 0.349578 1.3:+58681116 None:intergenic
AAATTTCATTCCTCAAATCC+TGG 0.357679 1.3:+58681523 None:intergenic
CTCTGATGGCCATCTCTGCT+GGG 0.362231 1.3:-58681047 MS.gene071456:CDS
TCGCAATTAGATAATCAAAT+AGG 0.362937 1.3:+58683111 None:intergenic
AACTGCACTCTTGGTGAGTA+AGG 0.367677 1.3:+58682398 None:intergenic
TTTGTCTAACTCAGTACTTC+AGG 0.376348 1.3:-58686013 MS.gene071456:CDS
CTTCATCCTTCTCCGTTGAC+TGG 0.388679 1.3:+58683078 None:intergenic
AGTTGAATCTTTACGGTATA+GGG 0.391457 1.3:-58682379 MS.gene071456:CDS
TGTTTACTCCTAATGTTGAT+AGG 0.404703 1.3:-58686967 MS.gene071456:CDS
TACTAAACTAAACAAACAAT+AGG 0.418815 1.3:+58685931 None:intergenic
AGAGTGCAGTTGAATCTTTA+CGG 0.420853 1.3:-58682386 MS.gene071456:CDS
GCGATTCCATTGATTCTTGA+AGG 0.422533 1.3:-58687064 MS.gene071456:CDS
AATCCTGGGCTCGTGATTCT+CGG 0.424953 1.3:+58681538 None:intergenic
ACAGGATACGTACATCGAAT+TGG 0.425312 1.3:-58682733 MS.gene071456:CDS
CAGACTAATCCAAGAGACTT+AGG 0.426488 1.3:-58681365 MS.gene071456:intron
TCAGGCAGAGTCAAGATAAC+GGG 0.428996 1.3:+58684713 None:intergenic
GTCGTTGCTCGTGCGAAAAC+CGG 0.438454 1.3:-58687034 MS.gene071456:CDS
AACCTAGCTCTTCGAAGCTT+CGG 0.438740 1.3:+58687155 None:intergenic
ATAACATTACCTAAGTCTCT+TGG 0.449672 1.3:+58681356 None:intergenic
TTCTGGTACTTCTATCTCCT+TGG 0.454942 1.3:-58682689 MS.gene071456:intron
ACGGGAAGAGCATACAGTTC+TGG 0.456133 1.3:-58682706 MS.gene071456:CDS
TTGCAGCAAGCAGCACTGGT+TGG 0.456175 1.3:-58686081 MS.gene071456:intron
TCTTTACCTTCAAGAATCAA+TGG 0.459425 1.3:+58687058 None:intergenic
TAGGGATGACCTCATCCTTA+CGG 0.460048 1.3:+58684681 None:intergenic
GGTGCAAGAACGAAAACATT+AGG 0.462500 1.3:+58686932 None:intergenic
TAAAGATTCAACTGCACTCT+TGG 0.463233 1.3:+58682389 None:intergenic
ATTCTGAATTCGGAGTAGTA+AGG 0.464569 1.3:-58682995 MS.gene071456:CDS
GCACCTAAGGAAAATATTGT+TGG 0.467384 1.3:-58683056 MS.gene071456:CDS
TACGTATCCTGTCACACTGC+GGG 0.472114 1.3:+58682744 None:intergenic
AATCACGAGCCCAGGATTTG+AGG 0.472222 1.3:-58681533 MS.gene071456:CDS
CAATATGCTTGCTACTGACT+TGG 0.473105 1.3:-58686720 MS.gene071456:intron
CGCGTTTACGGTTGCTCCGG+CGG 0.475611 1.3:+58687222 None:intergenic
TCCAAGAGAAAATCAAGAAA+AGG 0.478895 1.3:-58681078 MS.gene071456:CDS
GAAATGCCCCGCAGTGTGAC+AGG 0.481074 1.3:-58682751 MS.gene071456:CDS
CATCCTTGCGATGTTGAAGT+TGG 0.484838 1.3:-58684327 MS.gene071456:CDS
GATGTAGAGCAACTTATCAT+TGG 0.489837 1.3:+58684346 None:intergenic
GAGTCGTGAACTATGTCAAC+AGG 0.494125 1.3:-58686909 MS.gene071456:intron
TTCTGAATTCGGAGTAGTAA+GGG 0.495213 1.3:-58682994 MS.gene071456:CDS
GTGTTTGCAGCAAGCAGCAC+TGG 0.511131 1.3:-58686085 MS.gene071456:intron
AATAGACAAAACAACAAAAG+AGG 0.511196 1.3:-58681160 MS.gene071456:CDS
AGAAGACACTGGCAACTTCT+GGG 0.513801 1.3:+58685215 None:intergenic
AATTTCATTCCTCAAATCCT+GGG 0.518000 1.3:+58681524 None:intergenic
AAAAGATCTTACTTCTTCAA+AGG 0.519084 1.3:+58682467 None:intergenic
TGCGATGTTGAAGTTGGAGT+TGG 0.522591 1.3:-58684321 MS.gene071456:CDS
ATCTTTACGGTATAGGGCTG+AGG 0.523411 1.3:-58682373 MS.gene071456:intron
GGATCATACCCCAGCAGAGA+TGG 0.524252 1.3:+58681038 None:intergenic
ATTGAAACTATTCTTGGAGA+AGG 0.526200 1.3:-58684249 MS.gene071456:intron
GTAAACAGTTTCTGAAGCAA+TGG 0.526610 1.3:+58686983 None:intergenic
CTTGGCTATGCAAGCAGGAG+TGG 0.526639 1.3:+58686038 None:intergenic
TAGAGCAACTTATCATTGGC+AGG 0.531606 1.3:+58684350 None:intergenic
TTTCATCAGGAATTCAATGC+CGG 0.531649 1.3:-58683134 MS.gene071456:intron
GTTCGCGTTTACGGTTGCTC+CGG 0.534237 1.3:+58687219 None:intergenic
GGGAAATAATAATCACCGAC+GGG 0.535938 1.3:-58681103 MS.gene071456:CDS
GTAGGTTTCTACAGATGAGA+TGG 0.540473 1.3:-58682493 MS.gene071456:intron
TAAGCTTACCAGAGATGCAA+TGG 0.542536 1.3:-58681124 MS.gene071456:CDS
TTCTTATGTCTGCAACATCA+AGG 0.543076 1.3:-58685196 MS.gene071456:intron
GGAGTGGAGATTAAAACATC+GGG 0.547109 1.3:+58686054 None:intergenic
CAAAACAACAAAAGAGGCAA+GGG 0.551778 1.3:-58681154 MS.gene071456:CDS
GCCTGAAGTGGGAAACCGTA+AGG 0.554707 1.3:-58684696 MS.gene071456:CDS
ACATCGCAAAGGTGTGGAGG+AGG 0.555139 1.3:+58681195 None:intergenic
AACAAAAGAGGCAAGGGCAA+TGG 0.555238 1.3:-58681148 MS.gene071456:CDS
TTCAGGCAGAGTCAAGATAA+CGG 0.557307 1.3:+58684712 None:intergenic
TATCTTGACTCTGCCTGAAG+TGG 0.559784 1.3:-58684708 MS.gene071456:CDS
GGAGAAGGATGAAGCACCTA+AGG 0.564618 1.3:-58683069 MS.gene071456:CDS
TTCCCGTCTCCATATTCTTG+AGG 0.564842 1.3:-58683571 MS.gene071456:intron
AAACACTTGGCTATGCAAGC+AGG 0.568069 1.3:+58686033 None:intergenic
TTCAACTGCACAACTTTGAG+CGG 0.568598 1.3:+58686746 None:intergenic
CCGCAACCAGTAATGGCCGC+CGG 0.569759 1.3:-58687238 None:intergenic
TTGTTCTGTGTGCTCACGTG+TGG 0.571100 1.3:+58687192 None:intergenic
TATCAGCCAGTCAACGGAGA+AGG 0.571214 1.3:-58683084 MS.gene071456:CDS
AGTGGGAAACCGTAAGGATG+AGG 0.579561 1.3:-58684690 MS.gene071456:CDS
AAGCTTACCAGAGATGCAAT+GGG 0.579573 1.3:-58681123 MS.gene071456:CDS
GCAACGTGCTGAATTGGAGT+AGG 0.579592 1.3:+58687085 None:intergenic
AAAAGGCAGTGACCCTCTGA+TGG 0.584949 1.3:-58681061 MS.gene071456:CDS
GTACATCGAATTGGACGTAC+GGG 0.585498 1.3:-58682724 MS.gene071456:CDS
TGTCCGAGAATCACGAGCCC+AGG 0.588508 1.3:-58681541 MS.gene071456:CDS
GCGGAACTTTGCATAGCTCA+AGG 0.591214 1.3:+58686765 None:intergenic
ACAAAACAACAAAAGAGGCA+AGG 0.591460 1.3:-58681155 MS.gene071456:CDS
TACCTCAAGAATATGGAGAC+GGG 0.591564 1.3:+58683569 None:intergenic
ATCTTGACTCTGCCTGAAGT+GGG 0.591582 1.3:-58684707 MS.gene071456:CDS
AGGAGTGGAGATTAAAACAT+CGG 0.592149 1.3:+58686053 None:intergenic
ATTCTAGTTTGGGATCAAGT+CGG 0.592413 1.3:-58683622 MS.gene071456:intron
CAGCAGAGATGGCCATCAGA+GGG 0.596159 1.3:+58681049 None:intergenic
GACAGATATCAGCCAGTCAA+CGG 0.597178 1.3:-58683090 MS.gene071456:CDS
CGTACATCGAATTGGACGTA+CGG 0.597566 1.3:-58682725 MS.gene071456:CDS
TGGCAACTTCTGGGTATGTG+TGG 0.598594 1.3:+58685224 None:intergenic
ACTGCACTCTTGGTGAGTAA+GGG 0.600084 1.3:+58682399 None:intergenic
TACTGAGTTAGACAAACACT+TGG 0.600301 1.3:+58686020 None:intergenic
CACAGAACAAGAAGTAGACG+AGG 0.606070 1.3:-58687179 MS.gene071456:CDS
TCTGGGACATCGCAAAGGTG+TGG 0.611172 1.3:+58681189 None:intergenic
GTTGGGGACAATGAAAACAA+TGG 0.611219 1.3:-58682444 MS.gene071456:CDS
AATTAGATAATCAAATAGGC+CGG 0.612982 1.3:+58683115 None:intergenic
GACCGAAGCTTCGAAGAGCT+AGG 0.613429 1.3:-58687157 MS.gene071456:CDS
ACTCCAACTTCAACATCGCA+AGG 0.621489 1.3:+58684324 None:intergenic
TGGGAAATAATAATCACCGA+CGG 0.622669 1.3:-58681104 MS.gene071456:CDS
TCTGATGGCCATCTCTGCTG+GGG 0.623283 1.3:-58681046 MS.gene071456:CDS
CCAGCAGAGATGGCCATCAG+AGG 0.626747 1.3:+58681048 None:intergenic
GGGACATCGCAAAGGTGTGG+AGG 0.629288 1.3:+58681192 None:intergenic
TGAAACTCTAGTTCTTGATG+AGG 0.636636 1.3:-58685968 MS.gene071456:CDS
ATACCTCAAGAATATGGAGA+CGG 0.637365 1.3:+58683568 None:intergenic
GCAAAGGTGTGGAGGAGGAG+CGG 0.643144 1.3:+58681200 None:intergenic
TCTGAATTCGGAGTAGTAAG+GGG 0.647959 1.3:-58682993 MS.gene071456:CDS
GGTAATCTGGGACATCGCAA+AGG 0.648080 1.3:+58681184 None:intergenic
ATATGGAGACGGGAATTCTG+AGG 0.653312 1.3:+58683579 None:intergenic
TGTTGACATAGTTCACGACT+CGG 0.662274 1.3:+58686911 None:intergenic
GTGGAGATTAAAACATCGGG+AGG 0.679011 1.3:+58686057 None:intergenic
TTGCAGACATAAGAAGACAC+TGG 0.684106 1.3:+58685204 None:intergenic
CAGGCAGAGTCAAGATAACG+GGG 0.698716 1.3:+58684714 None:intergenic
ACGTATCCTGTCACACTGCG+GGG 0.709245 1.3:+58682745 None:intergenic
GTACGTATCCTGTCACACTG+CGG 0.709671 1.3:+58682743 None:intergenic
GGAAATAATAATCACCGACG+GGG 0.733097 1.3:-58681102 MS.gene071456:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATAAAATAAAAA+GGG + chr1.3:58683115-58683134 None:intergenic 0.0%
!! TATATATATATAAAATAAAA+AGG + chr1.3:58683116-58683135 None:intergenic 0.0%
!! ATAAAAATATTCAAAGAAAA+TGG + chr1.3:58683885-58683904 None:intergenic 10.0%
!! ATAATTAATTGAAAATTAGA+TGG - chr1.3:58684966-58684985 MS.gene071456:intron 10.0%
!! CTATATGATAAAAAAAAAAT+AGG - chr1.3:58686304-58686323 MS.gene071456:intron 10.0%
!!! CTTTTAAATTTTTATAATGT+TGG - chr1.3:58682481-58682500 MS.gene071456:CDS 10.0%
!!! TAATTTCATTTTTAAACTAA+AGG + chr1.3:58686020-58686039 None:intergenic 10.0%
!!! TTAATATATAGATGATATTT+TGG - chr1.3:58686625-58686644 MS.gene071456:intron 10.0%
!! AAGTATTCTATAAAAAAACT+TGG + chr1.3:58684920-58684939 None:intergenic 15.0%
!! TGATAAAAAAAAAATAGGAA+CGG - chr1.3:58686309-58686328 MS.gene071456:intron 15.0%
!! TTAAAGATTATATTACTAAG+TGG - chr1.3:58684121-58684140 MS.gene071456:intron 15.0%
!! TTATATTTGTATCATTTGAT+TGG - chr1.3:58682371-58682390 MS.gene071456:intron 15.0%
!!! AAAAGTTAAATTTTATCACA+TGG - chr1.3:58684182-58684201 MS.gene071456:intron 15.0%
!!! AAAGAAGTAACATTAATTTT+TGG + chr1.3:58682402-58682421 None:intergenic 15.0%
!!! AATTTTCAATTAATTATGCT+TGG + chr1.3:58684963-58684982 None:intergenic 15.0%
!!! ATGTTGGTTAATTTTAATTT+TGG - chr1.3:58682497-58682516 MS.gene071456:intron 15.0%
!!! ATTCTATTTGTTTTAGAATA+TGG - chr1.3:58682129-58682148 MS.gene071456:intron 15.0%
!!! TAACTTTTATTACAAAGAAT+GGG + chr1.3:58684170-58684189 None:intergenic 15.0%
!!! TGCAAAAAATATTCTAAAAA+TGG - chr1.3:58681709-58681728 MS.gene071456:intron 15.0%
!!! TTAACTTTTATTACAAAGAA+TGG + chr1.3:58684171-58684190 None:intergenic 15.0%
!! AAAAAATAACTGAAAAGACA+TGG + chr1.3:58686606-58686625 None:intergenic 20.0%
!! AAACTTCACTCAAATTATTT+GGG - chr1.3:58682825-58682844 MS.gene071456:intron 20.0%
!! AACAAACATTGGATTATTAT+AGG - chr1.3:58686419-58686438 MS.gene071456:intron 20.0%
!! AATACTTTGCAAAATTTACT+TGG + chr1.3:58685652-58685671 None:intergenic 20.0%
!! ACAAACATTGGATTATTATA+GGG - chr1.3:58686420-58686439 MS.gene071456:intron 20.0%
!! AGAAATGCAAAATATCAATT+TGG + chr1.3:58681767-58681786 None:intergenic 20.0%
!! ATAAACATTTAATAGAAAGC+TGG - chr1.3:58682029-58682048 MS.gene071456:intron 20.0%
!! ATAATTAGAGTTGTATACTA+TGG - chr1.3:58685386-58685405 MS.gene071456:intron 20.0%
!! ATCAACTATAAAGAAATGAT+GGG + chr1.3:58683284-58683303 None:intergenic 20.0%
!! ATTGTTACTGTATGTAAATT+TGG - chr1.3:58686944-58686963 MS.gene071456:CDS 20.0%
!! CTAAAATTAGATTCTGAATT+CGG - chr1.3:58685262-58685281 MS.gene071456:intron 20.0%
!! TAAACTTCACTCAAATTATT+TGG - chr1.3:58682824-58682843 MS.gene071456:intron 20.0%
!! TACTAAACTAAACAAACAAT+AGG + chr1.3:58682339-58682358 None:intergenic 20.0%
!! TATCAACTATAAAGAAATGA+TGG + chr1.3:58683285-58683304 None:intergenic 20.0%
!! TATGATATAACATGTAAGAT+TGG + chr1.3:58684317-58684336 None:intergenic 20.0%
!! TATTGTATCATATCTTTCTT+TGG - chr1.3:58683715-58683734 MS.gene071456:intron 20.0%
!! TGATATTGTAATGTTAATTG+CGG - chr1.3:58683663-58683682 MS.gene071456:intron 20.0%
!! TTGATATCCAAATTATTGTT+GGG - chr1.3:58682441-58682460 MS.gene071456:CDS 20.0%
!! TTGGTAAATAATAGAAAAGA+AGG + chr1.3:58683790-58683809 None:intergenic 20.0%
!! TTGTGTAATATACTTTCTAT+CGG - chr1.3:58683358-58683377 MS.gene071456:intron 20.0%
!!! ATGAATTTTATGTCAAAACA+AGG - chr1.3:58682671-58682690 MS.gene071456:intron 20.0%
!!! ATGTAATGAAGATTTTTAAG+TGG - chr1.3:58682716-58682735 MS.gene071456:CDS 20.0%
!!! ATTCATATCTTTGTTTCATT+GGG - chr1.3:58685425-58685444 MS.gene071456:intron 20.0%
!!! CTGTTATGTGATATTATTTT+AGG - chr1.3:58683428-58683447 MS.gene071456:intron 20.0%
!!! GAAAAATGAAAGAAGTATAT+TGG + chr1.3:58683809-58683828 None:intergenic 20.0%
!!! GAAATATTAGGAGAAATTTT+TGG - chr1.3:58684811-58684830 MS.gene071456:intron 20.0%
!!! TATAAGTTTGTTTAGTTACA+TGG - chr1.3:58681886-58681905 MS.gene071456:intron 20.0%
!!! TTTCTTAAGTTCAAAACTTT+TGG + chr1.3:58682697-58682716 None:intergenic 20.0%
!!! TTTGATTTTTCAGATATATG+TGG - chr1.3:58681466-58681485 MS.gene071456:intron 20.0%
! AAAACTATAAATGTTCAGAC+TGG + chr1.3:58684558-58684577 None:intergenic 25.0%
! AAAAGATCTTACTTCTTCAA+AGG + chr1.3:58685803-58685822 None:intergenic 25.0%
! AACTTCACTCAAATTATTTG+GGG - chr1.3:58682826-58682845 MS.gene071456:intron 25.0%
! AACTTCTTCAAACATGAAAA+AGG + chr1.3:58686982-58687001 None:intergenic 25.0%
! AAGAAATTAGAAACAGAAAC+AGG - chr1.3:58683307-58683326 MS.gene071456:intron 25.0%
! AATAGACAAAACAACAAAAG+AGG - chr1.3:58687107-58687126 MS.gene071456:CDS 25.0%
! AATATACCAAAAGAACAACA+CGG + chr1.3:58685703-58685722 None:intergenic 25.0%
! AATCTCAAGCTGTTAAATAT+AGG + chr1.3:58684230-58684249 None:intergenic 25.0%
! AATCTTTAATATCATGCCAT+TGG + chr1.3:58684110-58684129 None:intergenic 25.0%
! AATTACATACCTCAAGAATA+TGG + chr1.3:58684708-58684727 None:intergenic 25.0%
! AATTAGATAATCAAATAGGC+CGG + chr1.3:58685155-58685174 None:intergenic 25.0%
! AGATGCTTTGTAATATAATG+TGG - chr1.3:58683200-58683219 MS.gene071456:intron 25.0%
! ATATAACATGTAAGATTGGA+TGG + chr1.3:58684313-58684332 None:intergenic 25.0%
! ATCTACTACATGAACTATAA+AGG + chr1.3:58681946-58681965 None:intergenic 25.0%
! CACATTGAATTAACAAACAT+TGG - chr1.3:58686408-58686427 MS.gene071456:intron 25.0%
! CAGATCTTCTATTATCATAT+GGG - chr1.3:58682994-58683013 MS.gene071456:CDS 25.0%
! CATAAAACCCAACAATAATT+TGG + chr1.3:58682451-58682470 None:intergenic 25.0%
! CTATAATACCAAAAGAAAGA+CGG + chr1.3:58684741-58684760 None:intergenic 25.0%
! CTGCTCAAATAAAATTTCAA+AGG + chr1.3:58687014-58687033 None:intergenic 25.0%
! CTTGATATCCAAATTATTGT+TGG - chr1.3:58682440-58682459 MS.gene071456:CDS 25.0%
! GTAAATAATAGAAAAGAAGG+CGG + chr1.3:58683787-58683806 None:intergenic 25.0%
! GTTAAATATAGGTTCTTGAA+TGG + chr1.3:58684219-58684238 None:intergenic 25.0%
! TAAAAATGTTCAGCAATTCT+GGG - chr1.3:58683607-58683626 MS.gene071456:CDS 25.0%
! TCGCAATTAGATAATCAAAT+AGG + chr1.3:58685159-58685178 None:intergenic 25.0%
! TCTACTACATGAACTATAAA+GGG + chr1.3:58681945-58681964 None:intergenic 25.0%
! TCTTAAATGTAGATCGAATT+AGG - chr1.3:58681668-58681687 MS.gene071456:intron 25.0%
! TGACTTCAAAAATGTATACA+CGG - chr1.3:58685300-58685319 MS.gene071456:intron 25.0%
! TGCGTAAATATTAGATTTAG+AGG - chr1.3:58682003-58682022 MS.gene071456:intron 25.0%
! TTATCTCTGTAAAATTGTAC+TGG - chr1.3:58683389-58683408 MS.gene071456:intron 25.0%
! TTGTTAGAAACAATTGCAAA+TGG + chr1.3:58683477-58683496 None:intergenic 25.0%
! TTTCAATTAATTATGCTTGG+AGG + chr1.3:58684960-58684979 None:intergenic 25.0%
! TTTCAGATTGAAACTATTCT+TGG - chr1.3:58684012-58684031 MS.gene071456:intron 25.0%
!! AAGAAGTAAGATCTTTTGTT+GGG - chr1.3:58685806-58685825 MS.gene071456:intron 25.0%
!! AGAATTGCTGAACATTTTTA+GGG + chr1.3:58683607-58683626 None:intergenic 25.0%
!! ATAGAAACATGATGACATTT+TGG + chr1.3:58684893-58684912 None:intergenic 25.0%
!! ATTTTGAGCAGACATATTTA+AGG + chr1.3:58684461-58684480 None:intergenic 25.0%
!! CTTAGATTAGCTATAATAGA+GGG - chr1.3:58682858-58682877 MS.gene071456:intron 25.0%
!! CTTATCAATGATTTTATGTC+TGG + chr1.3:58684050-58684069 None:intergenic 25.0%
!! GATTCATATCTTTGTTTCAT+TGG - chr1.3:58685424-58685443 MS.gene071456:intron 25.0%
!! GTATCCAAAATAATCTTTTC+AGG - chr1.3:58682971-58682990 MS.gene071456:CDS 25.0%
!! TAAGATTTAAAATGTTCTCC+CGG + chr1.3:58681653-58681672 None:intergenic 25.0%
!! TAATACACTCTCAAACATTT+TGG + chr1.3:58682652-58682671 None:intergenic 25.0%
!! TATTTAACAGCTTGAGATTT+TGG - chr1.3:58684231-58684250 MS.gene071456:intron 25.0%
!! TCTTAGATTAGCTATAATAG+AGG - chr1.3:58682857-58682876 MS.gene071456:intron 25.0%
!! TGAATATCAGAACTTTCTTT+TGG + chr1.3:58683973-58683992 None:intergenic 25.0%
!! TGACTAAACACAAACTTTTA+AGG + chr1.3:58686498-58686517 None:intergenic 25.0%
!! TTATAGCTAATCTAAGATTC+AGG + chr1.3:58682854-58682873 None:intergenic 25.0%
!! TTTTGGATAGAAAATCAAAC+TGG + chr1.3:58682635-58682654 None:intergenic 25.0%
!! TTTTGTCTATTAGGTAATCT+GGG + chr1.3:58687098-58687117 None:intergenic 25.0%
!!! AATGAAGATTTTTAAGTGGA+AGG - chr1.3:58682720-58682739 MS.gene071456:CDS 25.0%
!!! AATTTTTGGAGATTTTGGTT+TGG - chr1.3:58684825-58684844 MS.gene071456:intron 25.0%
!!! ATGGATTAGAAGATGAAAAA+AGG + chr1.3:58686837-58686856 None:intergenic 25.0%
!!! CATTTTTCGTTTTTTTTTCC+TGG - chr1.3:58683821-58683840 MS.gene071456:intron 25.0%
!!! CTTTTGTTGTTTTGTCTATT+AGG + chr1.3:58687107-58687126 None:intergenic 25.0%
!!! GATATTTTTGTTGAGAGTAT+GGG + chr1.3:58685932-58685951 None:intergenic 25.0%
!!! GTTATCCTATTTTGTTTTTG+AGG - chr1.3:58686259-58686278 MS.gene071456:intron 25.0%
!!! TGATATTTTTGTTGAGAGTA+TGG + chr1.3:58685933-58685952 None:intergenic 25.0%
AAAATGGAAAAACAAAGGTG+TGG + chr1.3:58686864-58686883 None:intergenic 30.0%
AAATCATTCAAAGCTCTCAT+TGG + chr1.3:58685968-58685987 None:intergenic 30.0%
AAATTTCATTCCTCAAATCC+TGG + chr1.3:58686747-58686766 None:intergenic 30.0%
AATTTCATTCCTCAAATCCT+GGG + chr1.3:58686746-58686765 None:intergenic 30.0%
ACATTTAATAGAAAGCTGGA+AGG - chr1.3:58682033-58682052 MS.gene071456:intron 30.0%
ACTTTGCAAAATTTACTTGG+TGG + chr1.3:58685649-58685668 None:intergenic 30.0%
AGAGACTTAGGTAATGTTAT+TGG - chr1.3:58686914-58686933 MS.gene071456:CDS 30.0%
AGCCTAAAATGGAAAAACAA+AGG + chr1.3:58686869-58686888 None:intergenic 30.0%
AGTTGAATCTTTACGGTATA+GGG - chr1.3:58685888-58685907 MS.gene071456:intron 30.0%
AGTTTCAAGAGAACCATTAA+TGG + chr1.3:58682286-58682305 None:intergenic 30.0%
AGTTTCTTCCTATCAACATT+AGG + chr1.3:58681311-58681330 None:intergenic 30.0%
ATAACATTACCTAAGTCTCT+TGG + chr1.3:58686914-58686933 None:intergenic 30.0%
ATAATGTGTGTGCATTAGAT+AGG + chr1.3:58686230-58686249 None:intergenic 30.0%
ATACAGATAAGAATAGGAAC+GGG - chr1.3:58686096-58686115 MS.gene071456:intron 30.0%
ATGAGAGAAGATAGATCAAT+TGG + chr1.3:58686457-58686476 None:intergenic 30.0%
ATTGAAACTATTCTTGGAGA+AGG - chr1.3:58684018-58684037 MS.gene071456:intron 30.0%
ATTTAATAGAAAGCTGGAAG+GGG - chr1.3:58682035-58682054 MS.gene071456:intron 30.0%
CAAAGATTAGAAAATGAGAG+AGG + chr1.3:58684614-58684633 None:intergenic 30.0%
CATTTAATAGAAAGCTGGAA+GGG - chr1.3:58682034-58682053 MS.gene071456:intron 30.0%
CTAAAAATGTTCAGCAATTC+TGG - chr1.3:58683606-58683625 MS.gene071456:CDS 30.0%
CTACTACATGAACTATAAAG+GGG + chr1.3:58681944-58681963 None:intergenic 30.0%
CTATACTGCATCAGTTTAAT+GGG - chr1.3:58684391-58684410 MS.gene071456:intron 30.0%
GATACAGATAAGAATAGGAA+CGG - chr1.3:58686095-58686114 MS.gene071456:intron 30.0%
GATCCCAAATATAGAAAAGA+AGG + chr1.3:58683754-58683773 None:intergenic 30.0%
GATGAAAACAAAATAACCTC+AGG + chr1.3:58684584-58684603 None:intergenic 30.0%
GCAGATCTTCTATTATCATA+TGG - chr1.3:58682993-58683012 MS.gene071456:CDS 30.0%
GGGAAAGAAGATAAAAATGA+AGG + chr1.3:58681924-58681943 None:intergenic 30.0%
GTAAATGATTTCAGTGAACA+TGG + chr1.3:58685457-58685476 None:intergenic 30.0%
GTTCCTACTAGTGAAATATT+AGG - chr1.3:58684799-58684818 MS.gene071456:intron 30.0%
TATGTCTGCTCAAAATGATT+TGG - chr1.3:58684465-58684484 MS.gene071456:intron 30.0%
TCCAAGAGAAAATCAAGAAA+AGG - chr1.3:58687189-58687208 MS.gene071456:CDS 30.0%
TCTATACTGCATCAGTTTAA+TGG - chr1.3:58684390-58684409 MS.gene071456:intron 30.0%
TCTCCTAATATTTCACTAGT+AGG + chr1.3:58684805-58684824 None:intergenic 30.0%
TCTTTACCTTCAAGAATCAA+TGG + chr1.3:58681212-58681231 None:intergenic 30.0%
TGACCATTTCTAATCCAAAA+TGG + chr1.3:58681627-58681646 None:intergenic 30.0%
TGAGCATAGAAATTGAAACA+GGG + chr1.3:58681391-58681410 None:intergenic 30.0%
TGTTCAATGTCTACTAGAAT+TGG + chr1.3:58682909-58682928 None:intergenic 30.0%
TGTTTACTCCTAATGTTGAT+AGG - chr1.3:58681300-58681319 MS.gene071456:intron 30.0%
TTAATTCAATGTGACACGAT+AGG + chr1.3:58686401-58686420 None:intergenic 30.0%
TTGAGCATAGAAATTGAAAC+AGG + chr1.3:58681392-58681411 None:intergenic 30.0%
TTGCAAGACATTTAAGTCTA+GGG + chr1.3:58681694-58681713 None:intergenic 30.0%
TTTAAGTGGAAGGAAAATGA+CGG - chr1.3:58682764-58682783 MS.gene071456:CDS 30.0%
TTTGCAAGACATTTAAGTCT+AGG + chr1.3:58681695-58681714 None:intergenic 30.0%
TTTGTAATATAATGTGGACG+TGG - chr1.3:58683206-58683225 MS.gene071456:intron 30.0%
TTTGTCTTACAAACTTACCA+AGG + chr1.3:58685598-58685617 None:intergenic 30.0%
! AAACTCTCAAATTCTGCTTT+TGG + chr1.3:58682746-58682765 None:intergenic 30.0%
! ACTTGTTTCCTCATTTTCTT+TGG - chr1.3:58681826-58681845 MS.gene071456:intron 30.0%
! AGAAGTAAGATCTTTTGTTG+GGG - chr1.3:58685807-58685826 MS.gene071456:intron 30.0%
! CAATACTTTTAAGCCTCATA+CGG - chr1.3:58686060-58686079 MS.gene071456:CDS 30.0%
! CAGAATTGCTGAACATTTTT+AGG + chr1.3:58683608-58683627 None:intergenic 30.0%
! GAAGAAGTAAGATCTTTTGT+TGG - chr1.3:58685805-58685824 MS.gene071456:intron 30.0%
! GATCCAACAATATTTTCCTT+AGG + chr1.3:58685217-58685236 None:intergenic 30.0%
! GTTAACCTATTTTGTGTTTG+AGG - chr1.3:58686180-58686199 MS.gene071456:intron 30.0%
! GTTTTGTCTATTAGGTAATC+TGG + chr1.3:58687099-58687118 None:intergenic 30.0%
! TCTGCCTGAAAAGATTATTT+TGG + chr1.3:58682978-58682997 None:intergenic 30.0%
! TGATCTTTTTGCACTTTTGA+AGG - chr1.3:58683335-58683354 MS.gene071456:intron 30.0%
! TGGTTTGATGATTGTTCTAA+TGG - chr1.3:58682149-58682168 MS.gene071456:intron 30.0%
! TTGATAAGTTTTCACCTAAC+AGG - chr1.3:58684062-58684081 MS.gene071456:intron 30.0%
! TTTTGGTATTATAGCTGCTA+AGG - chr1.3:58684747-58684766 MS.gene071456:CDS 30.0%
!! ACACCATTTTGGATTAGAAA+TGG - chr1.3:58681621-58681640 MS.gene071456:intron 30.0%
!! GGAGAAATTTTTGGAGATTT+TGG - chr1.3:58684820-58684839 MS.gene071456:intron 30.0%
!! TTGATGAGCTTATTTTCATC+AGG - chr1.3:58685120-58685139 MS.gene071456:intron 30.0%
!!! ATCCTATTTTGTTTTTGAGG+TGG - chr1.3:58686262-58686281 MS.gene071456:intron 30.0%
!!! ATTTGAGAGTTTTAAGTGGA+AGG - chr1.3:58682754-58682773 MS.gene071456:CDS 30.0%
!!! CACCTTTGTTTTTCCATTTT+AGG - chr1.3:58686864-58686883 MS.gene071456:intron 30.0%
!!! CAGAATTTGAGAGTTTTAAG+TGG - chr1.3:58682750-58682769 MS.gene071456:CDS 30.0%
!!! TCCTATTTTGTTTTTGAGGT+GGG - chr1.3:58686263-58686282 MS.gene071456:intron 30.0%
AATCCACGTTTAAGAACACA+AGG + chr1.3:58685042-58685061 None:intergenic 35.0%
AATCCTTGTGTTCTTAAACG+TGG - chr1.3:58685036-58685055 MS.gene071456:intron 35.0%
ACAAAACAACAAAAGAGGCA+AGG - chr1.3:58687112-58687131 MS.gene071456:CDS 35.0%
ACAGGAAAAAATGTTGAACC+AGG + chr1.3:58683842-58683861 None:intergenic 35.0%
ACTATAAATGTTCAGACTGG+TGG + chr1.3:58684555-58684574 None:intergenic 35.0%
AGAGTGCAGTTGAATCTTTA+CGG - chr1.3:58685881-58685900 MS.gene071456:intron 35.0%
AGCATAACACATTCAATACC+AGG + chr1.3:58686790-58686809 None:intergenic 35.0%
AGGAGTGGAGATTAAAACAT+CGG + chr1.3:58682217-58682236 None:intergenic 35.0%
AGTGGTCAAGAATTTGAACT+TGG - chr1.3:58684139-58684158 MS.gene071456:intron 35.0%
ATACCTCAAGAATATGGAGA+CGG + chr1.3:58684702-58684721 None:intergenic 35.0%
ATCCACCTCAAACACAAAAT+AGG + chr1.3:58686188-58686207 None:intergenic 35.0%
ATTATTTCCCATTGCATCTC+TGG + chr1.3:58687154-58687173 None:intergenic 35.0%
ATTCTGAATTCGGAGTAGTA+AGG - chr1.3:58685272-58685291 MS.gene071456:intron 35.0%
CAAAACAACAAAAGAGGCAA+GGG - chr1.3:58687113-58687132 MS.gene071456:CDS 35.0%
CAAGGAAAATCTAAATGCCA+AGG + chr1.3:58685747-58685766 None:intergenic 35.0%
CAGTTGAATCTTTACGGTAT+AGG - chr1.3:58685887-58685906 MS.gene071456:intron 35.0%
CCAAACTAGAATGATAGAGA+GGG + chr1.3:58684637-58684656 None:intergenic 35.0%
CCCAAATATAGAAAAGAAGG+CGG + chr1.3:58683751-58683770 None:intergenic 35.0%
CGTTTAAGAACACAAGGATT+TGG + chr1.3:58685036-58685055 None:intergenic 35.0%
GAACGGGTACAAGTTTAATA+TGG - chr1.3:58686112-58686131 MS.gene071456:intron 35.0%
GACAGGATACAGATAAGAAT+AGG - chr1.3:58686090-58686109 MS.gene071456:intron 35.0%
GAGCATAGAAATTGAAACAG+GGG + chr1.3:58681390-58681409 None:intergenic 35.0%
GATGTAGAGCAACTTATCAT+TGG + chr1.3:58683924-58683943 None:intergenic 35.0%
GATTAGAAATGGTCAATACC+GGG - chr1.3:58681632-58681651 MS.gene071456:intron 35.0%
GCACCTAAGGAAAATATTGT+TGG - chr1.3:58685211-58685230 MS.gene071456:CDS 35.0%
GCATAACACATTCAATACCA+GGG + chr1.3:58686789-58686808 None:intergenic 35.0%
GGAACGGTACAAGTTTAATA+TGG - chr1.3:58686325-58686344 MS.gene071456:intron 35.0%
GGATTAGAAATGGTCAATAC+CGG - chr1.3:58681631-58681650 MS.gene071456:intron 35.0%
GTGTGCATTAGATAGGAATA+GGG + chr1.3:58686223-58686242 None:intergenic 35.0%
TAAAGATTCAACTGCACTCT+TGG + chr1.3:58685881-58685900 None:intergenic 35.0%
TACATGTCATACACTGATGT+TGG - chr1.3:58684338-58684357 MS.gene071456:CDS 35.0%
TACTGAGTTAGACAAACACT+TGG + chr1.3:58682250-58682269 None:intergenic 35.0%
TAGAAACCTACAAGGAAACA+AGG + chr1.3:58685765-58685784 None:intergenic 35.0%
TGGGAAATAATAATCACCGA+CGG - chr1.3:58687163-58687182 MS.gene071456:CDS 35.0%
TGTGTGCATTAGATAGGAAT+AGG + chr1.3:58686224-58686243 None:intergenic 35.0%
TTCTGAATTCGGAGTAGTAA+GGG - chr1.3:58685273-58685292 MS.gene071456:intron 35.0%
TTCTTATCTGTATCCTGTCA+TGG + chr1.3:58686089-58686108 None:intergenic 35.0%
TTCTTATGTCTGCAACATCA+AGG - chr1.3:58683071-58683090 MS.gene071456:CDS 35.0%
TTTCATCAGGAATTCAATGC+CGG - chr1.3:58685133-58685152 MS.gene071456:intron 35.0%
TTTGTCTAACTCAGTACTTC+AGG - chr1.3:58682254-58682273 MS.gene071456:intron 35.0%
! AAAAAGTGTATCAGCTACAC+AGG + chr1.3:58683860-58683879 None:intergenic 35.0%
! AAATTTACTTGGTGGAGAAG+AGG + chr1.3:58685641-58685660 None:intergenic 35.0%
! AACCTATTTTGTGTTTGAGG+TGG - chr1.3:58686183-58686202 MS.gene071456:intron 35.0%
! ACCGCCTTCTTTTCTATATT+TGG - chr1.3:58683747-58683766 MS.gene071456:intron 35.0%
! CCGCCTTCTTTTCTATATTT+GGG - chr1.3:58683748-58683767 MS.gene071456:intron 35.0%
! GCCTTTTCTTGATTTTCTCT+TGG + chr1.3:58687193-58687212 None:intergenic 35.0%
! GTTTTTCCATTTTAGGCTGA+CGG - chr1.3:58686871-58686890 MS.gene071456:intron 35.0%
!! ATTATGCTTGGAGGTTTTGA+TGG + chr1.3:58684951-58684970 None:intergenic 35.0%
!! ATTCTAGTTTGGGATCAAGT+CGG - chr1.3:58684645-58684664 MS.gene071456:intron 35.0%
!! CATTTATAGTTTTGCACCTG+AGG - chr1.3:58684565-58684584 MS.gene071456:intron 35.0%
!! CCTCTCTATCATTCTAGTTT+GGG - chr1.3:58684635-58684654 MS.gene071456:intron 35.0%
!! CTTTCTGACATGTTTTTGTC+TGG - chr1.3:58685346-58685365 MS.gene071456:intron 35.0%
!! GATGATTGACATTGTTTTGC+AGG - chr1.3:58686675-58686694 MS.gene071456:intron 35.0%
!! GATTTTCCTTGTTTCCTTGT+AGG - chr1.3:58685756-58685775 MS.gene071456:intron 35.0%
!! GTAAACAGTTTCTGAAGCAA+TGG + chr1.3:58681287-58681306 None:intergenic 35.0%
!! TCTAATCCGTGTTGTTCTTT+TGG - chr1.3:58685694-58685713 MS.gene071456:intron 35.0%
!! TGAAACTCTAGTTCTTGATG+AGG - chr1.3:58682299-58682318 MS.gene071456:intron 35.0%
!!! CAAACTTTTAAGGCTCTGTT+TGG + chr1.3:58686488-58686507 None:intergenic 35.0%
!!! CCTATTTTGTTTTTGAGGTG+GGG - chr1.3:58686264-58686283 MS.gene071456:intron 35.0%
!!! GATTATTTTGGATACCGATC+AGG + chr1.3:58682966-58682985 None:intergenic 35.0%
AAGCTTACCAGAGATGCAAT+GGG - chr1.3:58687144-58687163 MS.gene071456:CDS 40.0%
AATGCCAAGGTAATGTAGCT+TGG + chr1.3:58685734-58685753 None:intergenic 40.0%
ACAGGATACGTACATCGAAT+TGG - chr1.3:58685534-58685553 MS.gene071456:intron 40.0%
ACATCCAAGCTACATTACCT+TGG - chr1.3:58685727-58685746 MS.gene071456:intron 40.0%
ACCTAACAGGTTTATGCACT+CGG - chr1.3:58684075-58684094 MS.gene071456:intron 40.0%
ATACTGTGTGCGCATTAGAT+AGG + chr1.3:58686151-58686170 None:intergenic 40.0%
ATATGAACCTACTCAAGTGC+TGG + chr1.3:58682090-58682109 None:intergenic 40.0%
ATGCTGTGTGTGCATTAGAT+AGG + chr1.3:58686364-58686383 None:intergenic 40.0%
CAGACTAATCCAAGAGACTT+AGG - chr1.3:58686902-58686921 MS.gene071456:intron 40.0%
CCAAAATGGTGTGCTAATCA+TGG + chr1.3:58681613-58681632 None:intergenic 40.0%
CCCAAACTAGAATGATAGAG+AGG + chr1.3:58684638-58684657 None:intergenic 40.0%
CCCCACCTCAAAAACAAAAT+AGG + chr1.3:58686267-58686286 None:intergenic 40.0%
CTCATCTGTAGAAACCTACA+AGG + chr1.3:58685773-58685792 None:intergenic 40.0%
GGAAATAATAATCACCGACG+GGG - chr1.3:58687165-58687184 MS.gene071456:CDS 40.0%
GGAGTGGAGATTAAAACATC+GGG + chr1.3:58682216-58682235 None:intergenic 40.0%
GGGAAATAATAATCACCGAC+GGG - chr1.3:58687164-58687183 MS.gene071456:CDS 40.0%
GGTCATGGAACATAGACAAT+TGG + chr1.3:58682945-58682964 None:intergenic 40.0%
GGTGCAAGAACGAAAACATT+AGG + chr1.3:58681338-58681357 None:intergenic 40.0%
GTAGGTTTCTACAGATGAGA+TGG - chr1.3:58685774-58685793 MS.gene071456:intron 40.0%
GTTGGGGACAATGAAAACAA+TGG - chr1.3:58685823-58685842 MS.gene071456:intron 40.0%
TAAGCTTACCAGAGATGCAA+TGG - chr1.3:58687143-58687162 MS.gene071456:CDS 40.0%
TACCAAAAGAAAGACGGAAG+TGG + chr1.3:58684735-58684754 None:intergenic 40.0%
TACCTCAAGAATATGGAGAC+GGG + chr1.3:58684701-58684720 None:intergenic 40.0%
TAGAGCAACTTATCATTGGC+AGG + chr1.3:58683920-58683939 None:intergenic 40.0%
TAGGAACGTGTCATAGAACT+GGG + chr1.3:58684786-58684805 None:intergenic 40.0%
TCTATGTTCCATGACCTGAT+CGG - chr1.3:58682949-58682968 MS.gene071456:intron 40.0%
TCTGAATTCGGAGTAGTAAG+GGG - chr1.3:58685274-58685293 MS.gene071456:intron 40.0%
TGCTCACTCCAAAGAAAATG+AGG + chr1.3:58681837-58681856 None:intergenic 40.0%
TGTGCGCATTAGATAGGAAT+GGG + chr1.3:58686145-58686164 None:intergenic 40.0%
TGTTGACATAGTTCACGACT+CGG + chr1.3:58681359-58681378 None:intergenic 40.0%
TTCAACTGCACAACTTTGAG+CGG + chr1.3:58681524-58681543 None:intergenic 40.0%
TTCAGGCAGAGTCAAGATAA+CGG + chr1.3:58683558-58683577 None:intergenic 40.0%
TTCTGGTACTTCTATCTCCT+TGG - chr1.3:58685578-58685597 MS.gene071456:intron 40.0%
TTGCAGACATAAGAAGACAC+TGG + chr1.3:58683066-58683085 None:intergenic 40.0%
! AAAACAAAGGTGTGGAGGAA+TGG + chr1.3:58686856-58686875 None:intergenic 40.0%
! AGCAAATGTTTTGCCAGAAC+CGG + chr1.3:58681255-58681274 None:intergenic 40.0%
! ATCCACTTCCGTCTTTCTTT+TGG - chr1.3:58684730-58684749 MS.gene071456:CDS 40.0%
! ATGGAAAAACAAAGGTGTGG+AGG + chr1.3:58686861-58686880 None:intergenic 40.0%
! CAATATGCTTGCTACTGACT+TGG - chr1.3:58681547-58681566 MS.gene071456:CDS 40.0%
! CCATGATTAGCACACCATTT+TGG - chr1.3:58681610-58681629 MS.gene071456:intron 40.0%
! CCCTCTCTATCATTCTAGTT+TGG - chr1.3:58684634-58684653 MS.gene071456:intron 40.0%
!! GCGATTCCATTGATTCTTGA+AGG - chr1.3:58681203-58681222 MS.gene071456:CDS 40.0%
!! TTTGGAGTTTTGCTCAACTC+AGG - chr1.3:58684483-58684502 MS.gene071456:intron 40.0%
AAACACTTGGCTATGCAAGC+AGG + chr1.3:58682237-58682256 None:intergenic 45.0%
AACAAAAGAGGCAAGGGCAA+TGG - chr1.3:58687119-58687138 MS.gene071456:CDS 45.0%
AACTCTGCAAAGTAAGTCCC+TGG - chr1.3:58686769-58686788 MS.gene071456:CDS 45.0%
AACTGCACTCTTGGTGAGTA+AGG + chr1.3:58685872-58685891 None:intergenic 45.0%
AAGAAGACACTGGCAACTTC+TGG + chr1.3:58683056-58683075 None:intergenic 45.0%
ACTCCAACTTCAACATCGCA+AGG + chr1.3:58683946-58683965 None:intergenic 45.0%
ACTGCACTCTTGGTGAGTAA+GGG + chr1.3:58685871-58685890 None:intergenic 45.0%
AGAAGACACTGGCAACTTCT+GGG + chr1.3:58683055-58683074 None:intergenic 45.0%
ATATGGAGACGGGAATTCTG+AGG + chr1.3:58684691-58684710 None:intergenic 45.0%
ATCTTGACTCTGCCTGAAGT+GGG - chr1.3:58683560-58683579 MS.gene071456:intron 45.0%
ATCTTTACGGTATAGGGCTG+AGG - chr1.3:58685894-58685913 MS.gene071456:intron 45.0%
CACAGAACAAGAAGTAGACG+AGG - chr1.3:58681088-58681107 MS.gene071456:CDS 45.0%
CATCCTTGCGATGTTGAAGT+TGG - chr1.3:58683940-58683959 MS.gene071456:intron 45.0%
CCTAACAGGTTTATGCACTC+GGG - chr1.3:58684076-58684095 MS.gene071456:intron 45.0%
CGTACATCGAATTGGACGTA+CGG - chr1.3:58685542-58685561 MS.gene071456:intron 45.0%
CTTCAGGCAGCATCCATTAA+TGG - chr1.3:58682270-58682289 MS.gene071456:intron 45.0%
GACAGATATCAGCCAGTCAA+CGG - chr1.3:58685177-58685196 MS.gene071456:intron 45.0%
GAGTCGTGAACTATGTCAAC+AGG - chr1.3:58681358-58681377 MS.gene071456:intron 45.0%
GCTTTCTCTTGCTGATGAAC+AGG - chr1.3:58685482-58685501 MS.gene071456:intron 45.0%
GTACATCGAATTGGACGTAC+GGG - chr1.3:58685543-58685562 MS.gene071456:intron 45.0%
GTAGGAACGTGTCATAGAAC+TGG + chr1.3:58684787-58684806 None:intergenic 45.0%
GTGGAGATTAAAACATCGGG+AGG + chr1.3:58682213-58682232 None:intergenic 45.0%
GTGTGCGCATTAGATAGGAA+TGG + chr1.3:58686146-58686165 None:intergenic 45.0%
GTTTATGCACTCGGGATAGT+TGG - chr1.3:58684084-58684103 MS.gene071456:intron 45.0%
TAACTGAGACAGGAACGACA+TGG + chr1.3:58686551-58686570 None:intergenic 45.0%
TAGGGATGACCTCATCCTTA+CGG + chr1.3:58683589-58683608 None:intergenic 45.0%
TATCTTGACTCTGCCTGAAG+TGG - chr1.3:58683559-58683578 MS.gene071456:intron 45.0%
TCAGGCAGAGTCAAGATAAC+GGG + chr1.3:58683557-58683576 None:intergenic 45.0%
TGCGATGTTGAAGTTGGAGT+TGG - chr1.3:58683946-58683965 MS.gene071456:intron 45.0%
TGTGGTTTCGTTCGCGTTTA+CGG + chr1.3:58681060-58681079 None:intergenic 45.0%
TTCCCGTCTCCATATTCTTG+AGG - chr1.3:58684696-58684715 MS.gene071456:CDS 45.0%
TTCGCAAGTCTAACTGAGAC+AGG + chr1.3:58686561-58686580 None:intergenic 45.0%
TTTGGATACCGATCAGGTCA+TGG + chr1.3:58682960-58682979 None:intergenic 45.0%
! AACCTAGCTCTTCGAAGCTT+CGG + chr1.3:58681115-58681134 None:intergenic 45.0%
! ATTTTCTCTTGGATCCCCGT+CGG + chr1.3:58687182-58687201 None:intergenic 45.0%
!! AATAAAAATTTAAAAAATTG+AGG + chr1.3:58683249-58683268 None:intergenic 5.0%
AAAAGGCAGTGACCCTCTGA+TGG - chr1.3:58687206-58687225 MS.gene071456:CDS 50.0%
AATCACGAGCCCAGGATTTG+AGG - chr1.3:58686734-58686753 MS.gene071456:CDS 50.0%
AATCCTGGGCTCGTGATTCT+CGG + chr1.3:58686732-58686751 None:intergenic 50.0%
AGTGAGCCGTCAGCCTAAAA+TGG + chr1.3:58686880-58686899 None:intergenic 50.0%
AGTGGGAAACCGTAAGGATG+AGG - chr1.3:58683577-58683596 MS.gene071456:CDS 50.0%
AGTGTCTCCAGCACTTGAGT+AGG - chr1.3:58682080-58682099 MS.gene071456:intron 50.0%
ATAGAAAGCTGGAAGGGGCT+AGG - chr1.3:58682040-58682059 MS.gene071456:intron 50.0%
CAGGCAGAGTCAAGATAACG+GGG + chr1.3:58683556-58683575 None:intergenic 50.0%
CCCGAGTGCATAAACCTGTT+AGG + chr1.3:58684079-58684098 None:intergenic 50.0%
CCTCATACGGTTTCCATGAC+AGG - chr1.3:58686073-58686092 MS.gene071456:CDS 50.0%
CCTGTCATGGAAACCGTATG+AGG + chr1.3:58686076-58686095 None:intergenic 50.0%
CTTCATCCTTCTCCGTTGAC+TGG + chr1.3:58685192-58685211 None:intergenic 50.0%
GCAACGTGCTGAATTGGAGT+AGG + chr1.3:58681185-58681204 None:intergenic 50.0%
GCGGAACTTTGCATAGCTCA+AGG + chr1.3:58681505-58681524 None:intergenic 50.0%
GGAATCGCAACGTGCTGAAT+TGG + chr1.3:58681191-58681210 None:intergenic 50.0%
GTACGTATCCTGTCACACTG+CGG + chr1.3:58685527-58685546 None:intergenic 50.0%
TACGTATCCTGTCACACTGC+GGG + chr1.3:58685526-58685545 None:intergenic 50.0%
TAGAAAGCTGGAAGGGGCTA+GGG - chr1.3:58682041-58682060 MS.gene071456:intron 50.0%
TATCAGCCAGTCAACGGAGA+AGG - chr1.3:58685183-58685202 MS.gene071456:intron 50.0%
TCCTTACGGTTTCCCACTTC+AGG + chr1.3:58683575-58683594 None:intergenic 50.0%
TGGCAACTTCTGGGTATGTG+TGG + chr1.3:58683046-58683065 None:intergenic 50.0%
TTGTTCTGTGTGCTCACGTG+TGG + chr1.3:58681078-58681097 None:intergenic 50.0%
! ACGGGAAGAGCATACAGTTC+TGG - chr1.3:58685561-58685580 MS.gene071456:intron 50.0%
! GGAGAAGGATGAAGCACCTA+AGG - chr1.3:58685198-58685217 MS.gene071456:CDS 50.0%
! GGTAATCTGGGACATCGCAA+AGG + chr1.3:58687086-58687105 None:intergenic 50.0%
ACGTATCCTGTCACACTGCG+GGG + chr1.3:58685525-58685544 None:intergenic 55.0%
CACTCGGGATAGTTGGCCAA+TGG - chr1.3:58684091-58684110 MS.gene071456:intron 55.0%
CAGCAGAGATGGCCATCAGA+GGG + chr1.3:58687221-58687240 None:intergenic 55.0%
CTCTGATGGCCATCTCTGCT+GGG - chr1.3:58687220-58687239 MS.gene071456:CDS 55.0%
CTTGGCTATGCAAGCAGGAG+TGG + chr1.3:58682232-58682251 None:intergenic 55.0%
GACCGAAGCTTCGAAGAGCT+AGG - chr1.3:58681110-58681129 MS.gene071456:CDS 55.0%
GCCTGAAGTGGGAAACCGTA+AGG - chr1.3:58683571-58683590 MS.gene071456:intron 55.0%
GTCGTTGCTCGTGCGAAAAC+CGG - chr1.3:58681233-58681252 MS.gene071456:CDS 55.0%
GTGTTTGCAGCAAGCAGCAC+TGG - chr1.3:58682182-58682201 MS.gene071456:intron 55.0%
GTTCGCGTTTACGGTTGCTC+CGG + chr1.3:58681051-58681070 None:intergenic 55.0%
TCAGACTGGTGGAAGCAGTG+TGG + chr1.3:58684544-58684563 None:intergenic 55.0%
TCTGATGGCCATCTCTGCTG+GGG - chr1.3:58687221-58687240 MS.gene071456:CDS 55.0%
TGGTGGAAGCAGTGTGGTTG+AGG + chr1.3:58684538-58684557 None:intergenic 55.0%
! ACATCGCAAAGGTGTGGAGG+AGG + chr1.3:58687075-58687094 None:intergenic 55.0%
! TCTGGGACATCGCAAAGGTG+TGG + chr1.3:58687081-58687100 None:intergenic 55.0%
!! TGCAGCAAGCAGCACTGGTT+GGG - chr1.3:58682187-58682206 MS.gene071456:intron 55.0%
!! TTGCAGCAAGCAGCACTGGT+TGG - chr1.3:58682186-58682205 MS.gene071456:intron 55.0%
CCAGCAGAGATGGCCATCAG+AGG + chr1.3:58687222-58687241 None:intergenic 60.0%
CCTCTGATGGCCATCTCTGC+TGG - chr1.3:58687219-58687238 MS.gene071456:CDS 60.0%
GAAATGCCCCGCAGTGTGAC+AGG - chr1.3:58685516-58685535 MS.gene071456:intron 60.0%
GAAGGGGCTAGGGTCAGTGT+AGG - chr1.3:58682051-58682070 MS.gene071456:intron 60.0%
TGTCCGAGAATCACGAGCCC+AGG - chr1.3:58686726-58686745 MS.gene071456:CDS 60.0%
! GCAAAGGTGTGGAGGAGGAG+CGG + chr1.3:58687070-58687089 None:intergenic 60.0%
! GCTCGTGCGAAAACCGGTTC+TGG - chr1.3:58681239-58681258 MS.gene071456:intron 60.0%
! GGGACATCGCAAAGGTGTGG+AGG + chr1.3:58687078-58687097 None:intergenic 60.0%
CGCGTTTACGGTTGCTCCGG+CGG + chr1.3:58681048-58681067 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 58681041 58687248 58681041 ID=MS.gene071456
chr1.3 mRNA 58681041 58687248 58681041 ID=MS.gene071456.t1;Parent=MS.gene071456
chr1.3 exon 58686910 58687248 58686910 ID=MS.gene071456.t1.exon1;Parent=MS.gene071456.t1
chr1.3 CDS 58686910 58687248 58686910 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
chr1.3 exon 58686721 58686810 58686721 ID=MS.gene071456.t1.exon2;Parent=MS.gene071456.t1
chr1.3 CDS 58686721 58686810 58686721 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
chr1.3 exon 58685944 58686097 58685944 ID=MS.gene071456.t1.exon3;Parent=MS.gene071456.t1
chr1.3 CDS 58685944 58686097 58685944 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
chr1.3 exon 58685197 58685254 58685197 ID=MS.gene071456.t1.exon4;Parent=MS.gene071456.t1
chr1.3 CDS 58685197 58685254 58685197 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
chr1.3 exon 58684661 58684775 58684661 ID=MS.gene071456.t1.exon5;Parent=MS.gene071456.t1
chr1.3 CDS 58684661 58684775 58684661 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
chr1.3 exon 58684250 58684381 58684250 ID=MS.gene071456.t1.exon6;Parent=MS.gene071456.t1
chr1.3 CDS 58684250 58684381 58684250 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
chr1.3 exon 58683572 58683637 58683572 ID=MS.gene071456.t1.exon7;Parent=MS.gene071456.t1
chr1.3 CDS 58683572 58683637 58683572 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
chr1.3 exon 58682968 58683147 58682968 ID=MS.gene071456.t1.exon8;Parent=MS.gene071456.t1
chr1.3 CDS 58682968 58683147 58682968 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
chr1.3 exon 58682690 58682785 58682690 ID=MS.gene071456.t1.exon9;Parent=MS.gene071456.t1
chr1.3 CDS 58682690 58682785 58682690 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
chr1.3 exon 58682374 58682511 58682374 ID=MS.gene071456.t1.exon10;Parent=MS.gene071456.t1
chr1.3 CDS 58682374 58682511 58682374 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
chr1.3 exon 58681510 58681592 58681510 ID=MS.gene071456.t1.exon11;Parent=MS.gene071456.t1
chr1.3 CDS 58681510 58681592 58681510 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
chr1.3 exon 58681366 58681403 58681366 ID=MS.gene071456.t1.exon12;Parent=MS.gene071456.t1
chr1.3 CDS 58681366 58681403 58681366 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
chr1.3 exon 58681041 58681255 58681041 ID=MS.gene071456.t1.exon13;Parent=MS.gene071456.t1
chr1.3 CDS 58681041 58681255 58681041 ID=cds.MS.gene071456.t1;Parent=MS.gene071456.t1
Gene Sequence

>MS.gene071456

ATGGCCGCCGGAGCAACCGTAAACGCGAACGAAACCACACGTGAGCACACAGAACAAGAAGTAGACGAGGACCGAAGCTTCGAAGAGCTAGGTTTAGACGCACGTCTCGTTCGCGCTTTACTGAAGAAACGAATTGAGAAACCTACTCCAATTCAGCACGTTGCGATTCCATTGATTCTTGAAGGTAAAGACGTCGTTGCTCGTGCGAAAACCGGTTCTGGCAAAACATTTGCTTATCTTCTTCCATTGCTTCAGAAACTGTTTACTCCTAATGTTGATAGGAAGAAACTAGCTCCTAATGTTTTCGTTCTTGCACCGAGTCGTGAACTATGTCAACAGGTGCATTCCCCTGTTTCAATTTCTATGCTCAATATCTTTTTTTACAGTTGTATATAAATGTATCTATTTCATGTTTTTTGTTGTTATTTGATTTTTCAGATATATGTGGAAGTGAAGTCACTCCTTGAGCTATGCAAAGTTCCGCTCAAAGTTGTGCAGTTGAATAGCAATATGCTTGCTACTGACTTGGTTCGTTATTCTCTTTATGATTTTCGTTGTTGCAATTTATGCCATGATTAGCACACCATTTTGGATTAGAAATGGTCAATACCGGGAGAACATTTTAAATCTTAAATGTAGATCGAATTAGGCCCTAGACTTAAATGTCTTGCAAAAAATATTCTAAAAATGGCTAATTTGACTCACTTTTAAATATCATAAAGACCAAATTGATATTTTGCATTTCTTAGTGAACTGCACATTTCGACTGTGTGCATCAATTAATTACTTGTTTCCTCATTTTCTTTGGAGTGAGCAAGATTTTTTGAGTAAACTCACATGTCATATATAAGTTTGTTTAGTTACATGGCTGTGATAGCTTCCTTCATTTTTATCTTCTTTCCCCTTTATAGTTCATGTAGTAGATTAGATAGTAAGACAAGAATAGAGTTGTATGTGAAACATGCGTAAATATTAGATTTAGAGGCGTATAAACATTTAATAGAAAGCTGGAAGGGGCTAGGGTCAGTGTAGGTATACAAGTGTCTCCAGCACTTGAGTAGGTTCATATATGCATGTCAAAACTATGTATTCTATTTGTTTTAGAATATGGTTTGATGATTGTTCTAATGGTCTAAAATTTGTGTTTGCAGCAAGCAGCACTGGTTGGGCCTCCCGATGTTTTAATCTCCACTCCTGCTTGCATAGCCAAGTGTTTGTCTAACTCAGTACTTCAGGCAGCATCCATTAATGGTTCTCTTGAAACTCTAGTTCTTGATGAGGTGAATCAGATAAAGCCTATTGTTTGTTTAGTTTAGTAAAGTATAATTGTTTATATTTGTATCATTTGATTGGTAAGACCAAAAATTAATGTTACTTCTTTTCATTAATAGTTACGCTACTTGATATCCAAATTATTGTTGGGTTTTATGTTTTTTATAGCTTTTAAATTTTTATAATGTTGGTTAATTTTAATTTTGGATTATCTATACTTTTGATTTCTCTAGTTTGAACTAAATGCGATTTTGATAACTCAAGTTTTTTTGAATCAACAACTTTTAGTTATCAAAATCGCGTTAAGTTCAATCACAATCCAGTTTGATTTTCTATCCAAAATGTTTGAGAGTGTATTATGAATTTTATGTCAAAACAAGGCCAAAAGTTTTGAACTTAAGAAATGTAATGAAGATTTTTAAGTGGAAGGCCAAAAGCAGAATTTGAGAGTTTTAAGTGGAAGGAAAATGACGGAGAGATTCAATTACTGACATTAAATTTTTTTAAGAGCTAAACTTCACTCAAATTATTTGGGGTACCTGAATCTTAGATTAGCTATAATAGAGGGACTAAAACTCTTTGATATATTAATGCCAATTCTAGTAGACATTGAACAGTTGTTAATTGTTCCAATTGTCTATGTTCCATGACCTGATCGGTATCCAAAATAATCTTTTCAGGCAGATCTTCTATTATCATATGGGTATGAAAATGACATAAAGCTTTAACACCACACATACCCAGAAGTTGCCAGTGTCTTCTTATGTCTGCAACATCAAGGTGTGTCATTTGTCTTTCACCCTTTTTATTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATCTTTCTGCTCAGATGCTTTGTAATATAATGTGGACGTGGATGCTACATCTTTCATTCCTCAATTTTTTAAATTTTTATTTAATAGTTTTAGCCCATCATTTCTTTATAGTTGATATTAAGAAATTAGAAACAGAAACAGGCATAATGATCTTTTTGCACTTTTGAAGGTTGTGTAATATACTTTCTATCGGAGAAGTGTTTATCTCTGTAAAATTGTACTGGCTTAGTGTATGAATGACTGTTATGTGATATTATTTTAGGATTAGTCTTTCGTAGAATCATGTCCATTTGCAATTGTTTCTAACAAAATGTTTTCTTTTGCAGTGACGATGTTGACAAACTAAAAAAGTTGATGTTACACAACCCCGTTATCTTGACTCTGCCTGAAGTGGGAAACCGTAAGGATGAGGTCATCCCTAAAAATGTTCAGCAATTCTGGGTAAGACATTCGATAAATTTTCTACACGTCTTCTTGATATTGTAATGTTAATTGCGGTGAAGTTTAAATCTTTATTTTACACAAAATATTGTATCATATCTTTCTTTGGAGACAAGAGACCGCCTTCTTTTCTATATTTGGGATCTGTCTTGTATCCGCCTTCTTTTCTATTATTTACCAATATACTTCTTTCATTTTTCGTTTTTTTTTCCTGGTTCAACATTTTTTCCTGTGTAGCTGATACACTTTTTAACCATTTTCTTTGAATATTTTTATCAGATCTCTTGTCCTGCCAATGATAAGTTGCTCTACATCCTTGCGATGTTGAAGTTGGAGTTGGTCCAAAAGAAAGTTCTGATATTCACTAATAACATAGATACGAGTTTCAGATTGAAACTATTCTTGGAGAAGGTATGTGCCAGACATAAAATCATTGATAAGTTTTCACCTAACAGGTTTATGCACTCGGGATAGTTGGCCAATGGCATGATATTAAAGATTATATTACTAAGTGGTCAAGAATTTGAACTTGGTCATGCCCATTCTTTGTAATAAAAGTTAAATTTTATCACATGGTAGATGTAAAACCATTCAAGAACCTATATTTAACAGCTTGAGATTTTGGTATAGATGATTATTGACAGCATTTGCATCTTTTTGTATTCATCAATTAAATTTAATCCATCCAATCTTACATGTTATATCATACTACATGTCATACACTGATGTTGGCACATTTTTTTTAACAATTCACATTGATATCTATACTGCATCAGTTTAATGGGTGATAATCAATCAACATATTTTCTGTAATCTGAATTTTTTGTTGCCTTAAATATGTCTGCTCAAAATGATTTGGAGTTTTGCTCAACTCAGGAAAATCATGTTTCTTAGTTACAATTATTTCCTCAACCACACTGCTTCCACCAGTCTGAACATTTATAGTTTTGCACCTGAGGTTATTTTGTTTTCATCACTTCTTCCTCTCTCATTTTCTAATCTTTGCCCTCTCTATCATTCTAGTTTGGGATCAAGTCGGCTGTTTTAAATGCTGAATTGCCTCAGAATTCCCGTCTCCATATTCTTGAGGTATGTAATTTTATCCACTTCCGTCTTTCTTTTGGTATTATAGCTGCTAAGGTTTTTCGACTTAACCCAGTTCTATGACACGTTCCTACTAGTGAAATATTAGGAGAAATTTTTGGAGATTTTGGTTTGGAGAAACATATTCTATTTTCATTTTTATTTTTACTTGTAATTACCAAAATGTCATCATGTTTCTATTTTGCCAAGTTTTTTTATAGAATACTTTTTTGTTTCCATCAAAACCTCCAAGCATAATTAATTGAAAATTAGATGGCATTTTGCAAATTAAAATTGAAAAACATAAAATGTTTGAACAAACCAAATCCTTGTGTTCTTAAACGTGGATTTATTATTTTATTCATTCATTTATATATAGATATACGCTTGACATTTTATTACATGATTTTGATGAGCTTATTTTCATCAGGAATTCAATGCCGGCCTATTTGATTATCTAATTGCGACAGATATCAGCCAGTCAACGGAGAAGGATGAAGCACCTAAGGAAAATATTGTTGGATCAAAAAAGTCTAAAAAATATACAAAGCTAAAATTAGATTCTGAATTCGGAGTAGTAAGGGGAATTGACTTCAAAAATGTATACACGGTATGCATGCCAACTCTTATATCTCTTTCTGACATGTTTTTGTCTGGTGTGTACGTTTGAAATTATAATTAGAGTTGTATACTATGGTAGATTTCATCTTCTGATTCATATCTTTGTTTCATTGGGAGATTGCCATGTTCACTGAAATCATTTACTTACTGCTTTCTCTTGCTGATGAACAGGTTATAAACTTTGAAATGCCCCGCAGTGTGACAGGATACGTACATCGAATTGGACGTACGGGAAGAGCATACAGTTCTGGTACTTCTATCTCCTTGGTAAGTTTGTAAGACAAACAAAACAGACAAACAAAACTCCTCTTCTCCACCAAGTAAATTTTGCAAAGTATTGTGACTCTTTGATTTTTTGCTCTCTAATCCGTGTTGTTCTTTTGGTATATTATTGACATCCAAGCTACATTACCTTGGCATTTAGATTTTCCTTGTTTCCTTGTAGGTTTCTACAGATGAGATGGATACCTTTGAAGAAGTAAGATCTTTTGTTGGGGACAATGAAAACAATGGCTCAAACTCAATCACAGAGTTTCCCTTACTCACCAAGAGTGCAGTTGAATCTTTACGGTATAGGGCTGAGGTGAGTTATATTTCCCATACTCTCAACAAAAATATCATAGATGCATCAACCAATGAGAGCTTTGAATGATTTTTTTGTGAAACAAAAAACTGATTATGAATCCTTTAGTTTAAAAATGAAATTATCTCATCTTATATTATGTTTCAATACTTTTAAGCCTCATACGGTTTCCATGACAGGATACAGATAAGAATAGGAACGGGTACAAGTTTAATATGGATCTTTTCCCATTCCTATCTAATGCGCACACAGTATTATGTCATTGTTAACCTATTTTGTGTTTGAGGTGGATTAGACAATGATACCCTATTCCTATCTAATGCACACACATTATTATGTCACTGTTATCCTATTTTGTTTTTGAGGTGGGGACTAGACAATGATGATACTATATGATAAAAAAAAAATAGGAACGGTACAAGTTTAATATGGATCTTTTCCTATTCCTATCTAATGCACACACAGCATTATGTCATTGTTATCCTATCGTGTCACATTGAATTAACAAACATTGGATTATTATAGGGTAGCAAAATAACCAATTGATCTATCTTCTCTCATTCTAGCTACCAAACAGAGCCTTAAAAGTTTGTGTTTAGTCAAACAATAAACATTATTTTTATGATTAAATTCCATGTCGTTCCTGTCTCAGTTAGACTTGCGAATATTTAGATTTACTAGCATCTTCCATGTCTTTTCAGTTATTTTTTTAATATATAGATGATATTTTGGCACTCTAGCTGCTTTGTAAACTATATTGATGATTGACATTGTTTTGCAGGATGTTGCAAAGAGTGTAACTAAAATTGCTGTCCGAGAATCACGAGCCCAGGATTTGAGGAATGAAATTTTGAACTCTGCAAAGTAAGTCCCTGGTATTGAATGTGTTATGCTCGAGATTTGTAACTCTGATCTTAACCTTTTTTCATCTTCTAATCCATTCCTCCACACCTTTGTTTTTCCATTTTAGGCTGACGGCTCACTTTCAGACTAATCCAAGAGACTTAGGTAATGTTATTGGTTCATTTATTGTTACTGTATGTAAATTTGGCATTTATTTTTGCCTTTTTCATGTTTGAAGAAGTTAAACTTTAACCTTTGAAATTTTATTTGAGCAGATCTATTGAAACATGACAAAGTTTTGAGCAAAACCGCTCCTCCTCCACACCTTTGCGATGTCCCAGATTACCTAATAGACAAAACAACAAAAGAGGCAAGGGCAATGGTTAAGCTTACCAGAGATGCAATGGGAAATAATAATCACCGACGGGGATCCAAGAGAAAATCAAGAAAAGGCAGTGACCCTCTGATGGCCATCTCTGCTGGGGTATGA
Protein sequence

>MS.gene071456.t1

MAAGATVNANETTREHTEQEVDEDRSFEELGLDARLVRALLKKRIEKPTPIQHVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTPNVDRKKLAPNVFVLAPSRELCQQIYVEVKSLLELCKVPLKVVQLNSNMLATDLQAALVGPPDVLISTPACIAKCLSNSVLQAASINGSLETLVLDEVNQIKPIVSLTPHIPRSCQCLLMSATSSDDVDKLKKLMLHNPVILTLPEVGNRKDEVIPKNVQQFWISCPANDKLLYILAMLKLELVQKKVLIFTNNIDTSFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDISQSTEKDEAPKENIVGSKKSKKYTKLKLDSEFGVVRGIDFKNVYTVINFEMPRSVTGYVHRIGRTGRAYSSGTSISLVSTDEMDTFEEVRSFVGDNENNGSNSITEFPLLTKSAVESLRYRAEDVAKSVTKIAVRESRAQDLRNEILNSAKLTAHFQTNPRDLDLLKHDKVLSKTAPPPHLCDVPDYLIDKTTKEARAMVKLTRDAMGNNNHRRGSKRKSRKGSDPLMAISAGV