AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55899


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55899.t1 MTR_2g032030 96.907 485 5 4 1 477 1 483 0.0 949
MS.gene55899.t1 MTR_2g032030 96.386 415 5 4 1 407 1 413 0.0 803
MS.gene55899.t1 MTR_7g079040 49.479 192 70 5 232 423 135 299 6.03e-48 168
MS.gene55899.t1 MTR_8g028565 41.892 222 98 4 232 453 136 326 3.11e-44 159
MS.gene55899.t1 MTR_7g109600 42.449 245 103 11 210 423 4 241 1.22e-39 144
MS.gene55899.t1 MTR_8g087000 65.625 96 31 1 232 325 45 140 1.46e-37 138
MS.gene55899.t1 MTR_1g099600 61.165 103 31 1 232 334 165 258 2.64e-37 139
MS.gene55899.t1 MTR_8g087000 65.957 94 30 1 234 325 48 141 1.26e-36 135
MS.gene55899.t1 MTR_2g083870 55.556 117 46 2 215 325 28 144 3.55e-35 132
MS.gene55899.t1 MTR_8g098945 68.235 85 23 1 261 345 129 209 1.81e-34 130
MS.gene55899.t1 MTR_2g016770 53.279 122 47 2 233 354 11 122 1.19e-32 124
MS.gene55899.t1 MTR_2g016770 52.756 127 50 2 234 360 4 120 2.02e-32 123
MS.gene55899.t1 MTR_4g127040 59.770 87 30 1 232 318 221 302 3.29e-29 117
MS.gene55899.t1 MTR_1g009613 57.955 88 32 2 231 318 237 319 4.48e-29 117
MS.gene55899.t1 MTR_5g016610 56.842 95 36 2 224 318 167 256 1.40e-27 111
MS.gene55899.t1 MTR_4g094908 57.471 87 32 2 232 318 242 323 6.43e-26 108
MS.gene55899.t1 MTR_1g070455 53.846 91 36 3 234 323 271 356 9.61e-25 105
MS.gene55899.t1 MTR_3g108960 48.454 97 45 2 222 318 280 371 2.45e-24 105
MS.gene55899.t1 MTR_2g024350 51.948 77 36 1 259 334 6 82 2.25e-23 98.6
MS.gene55899.t1 MTR_0117s0040 46.392 97 44 1 222 318 43 131 4.36e-23 98.2
MS.gene55899.t1 MTR_2g024380 37.143 140 74 3 199 337 202 328 6.43e-23 101
MS.gene55899.t1 MTR_7g109600 41.954 174 65 9 281 423 7 175 3.00e-21 92.0
MS.gene55899.t1 MTR_1g086790 52.632 76 34 2 262 336 159 233 3.50e-20 91.7
MS.gene55899.t1 MTR_8g069935 50.549 91 34 2 232 321 311 391 1.16e-19 91.7
MS.gene55899.t1 MTR_7g110720 52.113 71 34 0 261 331 216 286 8.79e-19 89.0
MS.gene55899.t1 MTR_7g110720 52.113 71 34 0 261 331 189 259 1.01e-18 88.6
MS.gene55899.t1 MTR_3g053330 41.584 101 58 1 236 336 227 326 1.13e-18 89.0
MS.gene55899.t1 MTR_4g094588 57.377 61 25 1 262 322 179 238 1.18e-18 87.4
MS.gene55899.t1 MTR_7g011820 51.316 76 36 1 262 337 411 485 1.60e-18 88.6
MS.gene55899.t1 MTR_4g082580 41.584 101 52 2 230 324 241 340 6.86e-18 85.9
MS.gene55899.t1 MTR_4g007060 49.367 79 39 1 255 333 123 200 6.94e-18 84.3
MS.gene55899.t1 MTR_8g067635 50.000 74 36 1 259 331 347 420 8.10e-18 86.7
MS.gene55899.t1 MTR_4g007060 49.367 79 39 1 255 333 157 234 8.24e-18 84.7
MS.gene55899.t1 MTR_2g023930 57.377 61 26 0 261 321 305 365 1.25e-17 85.9
MS.gene55899.t1 MTR_8g087000 71.111 45 13 0 281 325 35 79 1.35e-17 80.9
MS.gene55899.t1 MTR_5g042920 47.561 82 39 2 262 340 321 401 5.62e-17 83.6
MS.gene55899.t1 MTR_5g091390 55.738 61 26 1 262 322 158 217 5.98e-17 82.0
MS.gene55899.t1 MTR_6g053200 43.011 93 53 0 262 354 331 423 6.27e-17 83.6
MS.gene55899.t1 MTR_8g067650 48.649 74 37 1 259 331 337 410 8.76e-17 83.2
MS.gene55899.t1 MTR_7g109800 39.259 135 70 5 222 349 109 238 1.08e-16 80.9
MS.gene55899.t1 MTR_2g105060 43.038 79 45 0 258 336 91 169 1.23e-16 79.7
MS.gene55899.t1 MTR_4g049790 40.860 93 48 1 239 331 297 382 1.29e-16 82.8
MS.gene55899.t1 MTR_4g094412 54.098 61 28 0 262 322 235 295 1.45e-16 82.4
MS.gene55899.t1 MTR_4g094412 54.098 61 28 0 262 322 244 304 1.55e-16 82.4
MS.gene55899.t1 MTR_2g105060 43.038 79 45 0 258 336 166 244 1.68e-16 80.9
MS.gene55899.t1 MTR_4g132430 53.333 60 28 0 262 321 128 187 1.77e-16 81.3
MS.gene55899.t1 MTR_4g049760 45.333 75 41 0 257 331 286 360 1.88e-16 82.4
MS.gene55899.t1 MTR_7g009730 48.571 70 36 0 262 331 220 289 1.90e-16 82.4
MS.gene55899.t1 MTR_5g067680 40.404 99 53 2 220 316 165 259 2.02e-16 80.9
MS.gene55899.t1 MTR_7g062220 43.299 97 48 2 222 318 91 180 2.29e-16 80.5
MS.gene55899.t1 MTR_4g132430 53.333 60 28 0 262 321 262 321 2.58e-16 81.6
MS.gene55899.t1 MTR_7g080020 40.000 100 53 2 232 325 458 556 5.88e-16 81.3
MS.gene55899.t1 MTR_7g080020 47.143 70 35 2 252 321 271 338 2.13e-11 66.6
MS.gene55899.t1 MTR_7g100510 55.385 65 28 1 259 323 359 422 5.97e-16 80.1
MS.gene55899.t1 MTR_7g100510 39.796 98 46 4 243 331 164 257 3.60e-12 68.6
MS.gene55899.t1 MTR_2g045360 39.394 99 59 1 235 333 186 283 1.63e-15 79.0
MS.gene55899.t1 MTR_3g056100 42.045 88 41 2 262 340 272 358 1.89e-15 79.0
MS.gene55899.t1 MTR_5g043880 54.386 57 25 1 262 318 125 180 1.92e-15 77.0
MS.gene55899.t1 MTR_3g056100 42.045 88 41 2 262 340 259 345 2.24e-15 78.6
MS.gene55899.t1 MTR_3g104750 38.614 101 57 3 219 319 66 161 2.45e-15 73.9
MS.gene55899.t1 MTR_3g056100 45.000 80 34 2 262 332 416 494 2.70e-15 79.0
MS.gene55899.t1 MTR_3g056100 45.000 80 34 2 262 332 403 481 2.99e-15 78.6
MS.gene55899.t1 MTR_2g088000 45.833 72 39 0 262 333 350 421 3.03e-15 78.6
MS.gene55899.t1 MTR_5g094430 47.692 65 33 1 262 326 253 316 3.50e-15 77.8
MS.gene55899.t1 MTR_2g033820 51.667 60 28 1 262 321 204 262 3.61e-15 77.4
MS.gene55899.t1 MTR_5g094430 47.692 65 33 1 262 326 231 294 3.70e-15 77.8
MS.gene55899.t1 MTR_8g092010 40.217 92 47 3 230 321 84 167 4.19e-15 73.9
MS.gene55899.t1 MTR_3g106060 42.529 87 38 1 262 348 139 213 4.76e-15 75.9
MS.gene55899.t1 MTR_3g095040 35.537 121 74 3 204 322 60 178 5.07e-15 74.3
MS.gene55899.t1 MTR_5g094430 47.692 65 33 1 262 326 365 428 5.38e-15 77.8
MS.gene55899.t1 MTR_8g027860 31.250 224 111 10 173 386 54 244 9.85e-15 75.9
MS.gene55899.t1 MTR_3g090860 42.342 111 56 4 262 369 134 239 1.39e-14 75.1
MS.gene55899.t1 MTR_4g107970 51.667 60 29 0 262 321 256 315 1.60e-14 76.3
MS.gene55899.t1 MTR_4g107970 51.667 60 29 0 262 321 179 238 1.80e-14 76.3
MS.gene55899.t1 MTR_1g013760 42.857 77 39 1 242 318 126 197 2.26e-14 73.9
MS.gene55899.t1 MTR_7g080000 39.394 99 53 2 232 324 397 494 2.95e-14 75.9
MS.gene55899.t1 MTR_7g080000 50.000 70 33 2 252 321 225 292 2.42e-12 69.7
MS.gene55899.t1 MTR_4g122530 42.667 75 42 1 262 336 209 282 3.60e-14 74.7
MS.gene55899.t1 MTR_7g079010 42.697 89 47 4 232 319 113 198 4.28e-14 72.0
MS.gene55899.t1 MTR_4g047580 41.333 75 44 0 257 331 277 351 5.01e-14 74.7
MS.gene55899.t1 MTR_3g009470 46.575 73 37 2 255 326 488 559 6.13e-14 74.7
MS.gene55899.t1 MTR_3g009470 49.296 71 33 3 262 331 281 349 6.69e-12 68.2
MS.gene55899.t1 MTR_7g117200 39.796 98 45 3 262 353 119 208 7.35e-14 72.8
MS.gene55899.t1 MTR_4g013260 46.479 71 36 2 255 324 329 398 8.54e-14 73.9
MS.gene55899.t1 MTR_4g013260 49.254 67 31 2 262 326 185 250 2.13e-12 69.3
MS.gene55899.t1 MTR_8g007270 33.065 124 73 3 195 318 97 210 9.24e-14 70.9
MS.gene55899.t1 MTR_7g028415 45.902 61 32 1 259 319 91 150 1.07e-13 69.3
MS.gene55899.t1 MTR_7g028710 45.902 61 32 1 259 319 91 150 1.07e-13 69.3
MS.gene55899.t1 MTR_6g086555 44.156 77 41 2 246 321 191 266 1.29e-13 72.8
MS.gene55899.t1 MTR_1g077780 49.180 61 30 1 262 322 63 122 2.49e-13 67.8
MS.gene55899.t1 MTR_5g074400 38.614 101 53 2 232 324 383 482 3.59e-13 72.0
MS.gene55899.t1 MTR_1g015140 34.862 109 66 3 211 319 56 159 3.60e-13 67.8
MS.gene55899.t1 MTR_4g130900 47.761 67 32 2 262 326 360 425 4.22e-13 71.6
MS.gene55899.t1 MTR_5g097490 48.485 66 33 1 262 327 253 317 5.41e-13 70.9
MS.gene55899.t1 MTR_7g071120 42.667 75 41 2 255 328 317 390 1.04e-12 70.5
MS.gene55899.t1 MTR_3g031220 46.154 65 34 1 262 326 366 429 1.08e-12 70.5
MS.gene55899.t1 MTR_1g013790 42.424 66 38 0 258 323 98 163 1.22e-12 68.2
MS.gene55899.t1 MTR_8g092140 46.667 60 31 1 259 318 158 216 1.22e-12 67.8
MS.gene55899.t1 MTR_3g095080 46.667 60 31 1 259 318 142 200 2.30e-12 66.6
MS.gene55899.t1 MTR_3g095080 46.667 60 31 1 259 318 166 224 2.51e-12 67.0
MS.gene55899.t1 MTR_3g009470 49.296 71 33 3 262 331 281 349 6.96e-12 67.8
MS.gene55899.t1 MTR_1g078260 46.970 66 33 2 254 318 240 304 8.51e-12 67.4
MS.gene55899.t1 MTR_8g099350 50.877 57 26 1 262 316 133 189 3.54e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55899.t1 AT1G30650 41.176 493 211 15 1 477 1 430 2.50e-86 271
MS.gene55899.t1 AT2G34830 41.189 471 183 18 1 438 1 410 6.97e-82 260
MS.gene55899.t1 AT2G34830 41.215 461 178 17 11 438 1 401 7.01e-80 255
MS.gene55899.t1 AT4G01250 48.603 179 61 4 232 402 109 264 1.05e-44 159
MS.gene55899.t1 AT5G52830 52.667 150 37 3 232 381 145 260 1.79e-40 149
MS.gene55899.t1 AT5G45050 40.927 259 108 9 210 451 1141 1371 6.61e-40 154
MS.gene55899.t1 AT5G45050 40.927 259 108 9 210 451 1113 1343 7.83e-40 154
MS.gene55899.t1 AT1G29280 60.526 114 39 2 220 332 32 140 9.14e-40 144
MS.gene55899.t1 AT5G45050 40.927 259 108 9 210 451 1002 1232 1.09e-39 153
MS.gene55899.t1 AT3G58710 68.478 92 28 1 232 322 40 131 5.09e-38 140
MS.gene55899.t1 AT3G58710 66.327 98 32 1 226 322 35 132 5.66e-38 140
MS.gene55899.t1 AT4G23550 56.911 123 43 2 236 357 124 237 1.23e-34 132
MS.gene55899.t1 AT2G30590 54.455 101 40 3 224 323 281 376 9.01e-29 117
MS.gene55899.t1 AT5G45260 57.009 107 33 2 232 336 1190 1285 2.06e-28 120
MS.gene55899.t1 AT2G23320 46.957 115 56 1 204 318 188 297 2.39e-27 112
MS.gene55899.t1 AT4G31550 55.172 87 34 1 232 318 221 302 4.57e-27 111
MS.gene55899.t1 AT4G24240 53.191 94 39 1 225 318 250 338 1.27e-26 110
MS.gene55899.t1 AT4G31550 55.172 87 34 1 232 318 222 303 1.55e-26 110
MS.gene55899.t1 AT2G24570 54.023 87 35 1 232 318 219 300 2.96e-25 106
MS.gene55899.t1 AT5G28650 52.874 87 36 2 232 318 238 319 1.03e-23 102
MS.gene55899.t1 AT3G04670 52.874 87 36 2 232 318 238 319 1.37e-23 101
MS.gene55899.t1 AT5G46350 54.054 74 31 2 262 333 184 256 4.49e-20 91.7
MS.gene55899.t1 AT1G29860 53.623 69 30 2 262 329 137 204 1.23e-18 86.7
MS.gene55899.t1 AT4G18170 57.377 61 25 1 262 322 173 232 2.22e-18 86.3
MS.gene55899.t1 AT1G68150 48.649 74 38 0 262 335 236 309 3.14e-18 86.7
MS.gene55899.t1 AT1G13960 45.000 100 42 4 232 321 219 315 5.16e-18 85.9
MS.gene55899.t1 AT1G13960 50.000 60 28 2 262 321 77 134 2.68e-11 65.5
MS.gene55899.t1 AT1G13960 45.000 100 42 4 232 321 372 468 7.08e-18 86.7
MS.gene55899.t1 AT1G13960 50.000 60 28 2 262 321 230 287 3.52e-11 65.9
MS.gene55899.t1 AT4G04450 48.684 76 39 0 261 336 198 273 1.35e-17 85.5
MS.gene55899.t1 AT4G04450 48.684 76 39 0 261 336 292 367 1.53e-17 85.5
MS.gene55899.t1 AT5G49520 55.000 60 26 1 262 321 222 280 1.54e-17 84.7
MS.gene55899.t1 AT1G62300 55.738 61 27 0 261 321 312 372 1.68e-17 85.5
MS.gene55899.t1 AT4G22070 55.738 61 27 0 261 321 297 357 3.01e-17 84.7
MS.gene55899.t1 AT4G22070 55.738 61 27 0 261 321 297 357 3.01e-17 84.7
MS.gene55899.t1 AT4G22070 55.738 61 27 0 261 321 297 357 3.01e-17 84.7
MS.gene55899.t1 AT4G22070 55.738 61 27 0 261 321 297 357 3.01e-17 84.7
MS.gene55899.t1 AT2G04880 54.545 66 29 1 259 324 281 345 3.67e-17 84.3
MS.gene55899.t1 AT2G04880 54.545 66 29 1 259 324 305 369 4.00e-17 84.3
MS.gene55899.t1 AT2G03340 47.778 90 42 3 262 350 416 501 5.70e-17 84.0
MS.gene55899.t1 AT2G03340 41.304 92 52 2 262 353 251 340 7.19e-13 71.2
MS.gene55899.t1 AT1G80840 48.485 66 34 0 258 323 143 208 7.78e-17 81.6
MS.gene55899.t1 AT3G62340 53.333 60 27 1 262 321 119 177 2.66e-16 79.3
MS.gene55899.t1 AT4G01720 39.000 100 60 1 222 321 201 299 3.00e-16 81.6
MS.gene55899.t1 AT5G26170 47.887 71 35 2 248 318 101 169 1.01e-15 75.5
MS.gene55899.t1 AT5G15130 47.143 70 37 0 262 331 228 297 1.25e-15 79.7
MS.gene55899.t1 AT5G15130 47.143 70 37 0 262 331 186 255 1.45e-15 79.3
MS.gene55899.t1 AT1G18860 53.333 60 28 0 262 321 240 299 1.87e-15 79.3
MS.gene55899.t1 AT2G21900 37.363 91 53 2 232 322 83 169 2.04e-15 75.5
MS.gene55899.t1 AT4G31800 47.945 73 35 1 262 334 112 181 3.39e-15 75.5
MS.gene55899.t1 AT1G69310 52.632 57 26 1 262 318 148 203 3.59e-15 76.3
MS.gene55899.t1 AT1G69310 52.632 57 26 1 262 318 148 203 3.59e-15 76.3
MS.gene55899.t1 AT1G69310 52.632 57 26 1 262 318 148 203 3.59e-15 76.3
MS.gene55899.t1 AT2G25000 51.667 60 29 0 262 321 104 163 6.06e-15 74.7
MS.gene55899.t1 AT2G25000 51.667 60 29 0 262 321 104 163 6.06e-15 74.7
MS.gene55899.t1 AT4G31800 47.945 73 35 1 262 334 177 246 6.10e-15 75.9
MS.gene55899.t1 AT2G25000 51.667 60 29 0 262 321 126 185 8.92e-15 74.7
MS.gene55899.t1 AT5G07100 46.053 76 36 2 262 333 142 216 1.03e-14 73.6
MS.gene55899.t1 AT5G07100 46.053 76 36 2 262 333 142 216 1.03e-14 73.6
MS.gene55899.t1 AT5G07100 46.053 76 36 2 262 333 142 216 1.03e-14 73.6
MS.gene55899.t1 AT5G07100 46.053 76 36 2 262 333 142 216 1.03e-14 73.6
MS.gene55899.t1 AT2G47260 51.667 60 28 1 262 321 175 233 1.34e-14 75.5
MS.gene55899.t1 AT2G25000 51.667 60 29 0 262 321 147 206 1.64e-14 73.9
MS.gene55899.t1 AT5G07100 46.053 76 36 2 262 333 235 309 2.05e-14 74.3
MS.gene55899.t1 AT5G41570 40.000 90 48 2 230 319 72 155 2.08e-14 72.0
MS.gene55899.t1 AT1G64000 50.820 61 29 1 259 319 112 171 2.49e-14 72.0
MS.gene55899.t1 AT1G69810 38.462 104 50 3 229 331 184 274 3.02e-14 74.7
MS.gene55899.t1 AT4G26640 46.154 65 34 1 262 326 206 269 4.07e-14 74.3
MS.gene55899.t1 AT4G26640 46.154 65 34 1 262 326 206 269 4.07e-14 74.3
MS.gene55899.t1 AT4G26640 46.154 65 34 1 262 326 206 269 4.07e-14 74.3
MS.gene55899.t1 AT4G26640 46.154 65 34 1 262 326 206 269 4.07e-14 74.3
MS.gene55899.t1 AT4G26640 46.154 65 34 1 262 326 342 405 5.47e-14 74.7
MS.gene55899.t1 AT1G69810 38.462 104 50 3 229 331 126 216 5.53e-14 73.6
MS.gene55899.t1 AT4G26640 46.154 65 34 1 262 326 382 445 5.97e-14 74.7
MS.gene55899.t1 AT4G26640 46.154 65 34 1 262 326 310 373 6.03e-14 74.3
MS.gene55899.t1 AT4G30935 47.761 67 32 2 262 326 332 397 7.39e-14 73.9
MS.gene55899.t1 AT3G01080 50.000 60 29 1 262 321 345 403 8.85e-14 73.6
MS.gene55899.t1 AT3G01080 47.059 68 34 2 262 329 206 271 3.29e-12 68.9
MS.gene55899.t1 AT3G01080 50.000 60 29 1 262 321 307 365 8.96e-14 73.6
MS.gene55899.t1 AT3G01080 47.059 68 34 2 262 329 168 233 3.40e-12 68.6
MS.gene55899.t1 AT2G37260 54.386 57 25 1 262 318 270 325 9.65e-14 72.8
MS.gene55899.t1 AT2G37260 28.426 197 119 5 255 432 79 272 5.74e-11 64.3
MS.gene55899.t1 AT2G37260 54.386 57 25 1 262 318 350 405 1.00e-13 73.6
MS.gene55899.t1 AT2G37260 28.426 197 119 5 255 432 159 352 5.27e-11 65.1
MS.gene55899.t1 AT2G37260 54.386 57 25 1 262 318 268 323 1.01e-13 72.8
MS.gene55899.t1 AT2G37260 28.426 197 119 5 255 432 77 270 5.14e-11 64.7
MS.gene55899.t1 AT5G56270 49.206 63 31 1 262 324 488 549 1.02e-13 73.9
MS.gene55899.t1 AT5G56270 47.059 68 32 3 262 327 274 339 1.52e-11 67.4
MS.gene55899.t1 AT5G13080 45.902 61 32 1 259 319 65 124 1.08e-13 68.9
MS.gene55899.t1 AT2G38470 44.444 72 39 1 262 333 363 433 1.23e-13 73.6
MS.gene55899.t1 AT4G39410 36.458 96 53 2 223 318 192 279 1.29e-13 72.0
MS.gene55899.t1 AT2G40750 33.099 142 84 4 232 367 122 258 4.16e-13 70.9
MS.gene55899.t1 AT2G44745 38.462 91 55 1 228 318 112 201 4.90e-13 68.9
MS.gene55899.t1 AT2G30250 50.820 61 29 1 262 322 329 388 5.99e-13 70.9
MS.gene55899.t1 AT4G26440 44.118 68 37 1 259 326 370 436 8.97e-13 70.9
MS.gene55899.t1 AT4G26440 46.667 75 36 3 262 334 179 251 1.46e-12 70.1
MS.gene55899.t1 AT3G01970 41.096 73 41 2 246 318 51 121 1.00e-12 66.2
MS.gene55899.t1 AT2G40740 40.909 88 45 3 232 316 147 230 1.20e-12 68.9
MS.gene55899.t1 AT2G46130 45.902 61 32 1 259 319 28 87 1.36e-12 64.7
MS.gene55899.t1 AT1G55600 46.774 62 32 1 260 321 306 366 1.41e-12 70.1
MS.gene55899.t1 AT5G43290 35.811 148 88 5 262 407 115 257 1.43e-12 68.6
MS.gene55899.t1 AT2G40740 40.909 88 45 3 232 316 156 239 1.48e-12 68.6
MS.gene55899.t1 AT5G24110 46.575 73 32 2 246 316 103 170 1.95e-12 68.6
MS.gene55899.t1 AT3G01080 47.059 68 34 2 262 329 206 271 2.22e-12 68.6
MS.gene55899.t1 AT3G56400 30.159 126 78 2 201 316 52 177 4.30e-12 67.4
MS.gene55899.t1 AT4G11070 44.928 69 32 2 262 324 142 210 5.70e-12 67.0
MS.gene55899.t1 AT4G11070 49.123 57 27 1 262 316 110 166 5.92e-12 66.6
MS.gene55899.t1 AT1G66550 33.684 95 61 1 224 316 66 160 7.93e-12 65.9
MS.gene55899.t1 AT5G64810 46.667 60 31 1 259 318 108 166 1.28e-11 63.9
MS.gene55899.t1 AT2G46400 39.583 96 46 4 226 316 73 161 1.38e-11 65.9
MS.gene55899.t1 AT1G66560 49.153 59 28 1 260 316 102 160 1.89e-11 64.7
MS.gene55899.t1 AT4G23810 48.276 58 28 1 262 317 159 216 3.70e-11 64.7
MS.gene55899.t1 AT1G66550 32.941 85 55 1 234 316 81 165 5.91e-11 63.2
MS.gene55899.t1 AT1G80590 32.540 126 78 2 262 385 86 206 8.87e-11 62.4

Find 80 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAAGAAGATTCATAATT+AGG 0.177473 2.3:-58094518 None:intergenic
TGATTAAACAATAGGTTTAA+TGG 0.202593 2.3:-58096664 None:intergenic
ATAATTGATGTTGCTTCTTC+TGG 0.224592 2.3:+58094365 MS.gene55899:CDS
ATAACAGCAGAAGGTTTAAT+TGG 0.226101 2.3:-58094563 None:intergenic
TTGTTCTCTTGTTCTTCTTT+TGG 0.236616 2.3:-58096454 None:intergenic
CTTTGTTTCTTCATCAAGTA+TGG 0.245608 2.3:+58093989 MS.gene55899:CDS
CATCATAGCCTTCTCTTGTT+TGG 0.267430 2.3:-58096799 None:intergenic
GGATAAGGTGAACCTTTAAT+AGG 0.279412 2.3:-58095535 None:intergenic
CAAAACCTTGATTAAACAAT+AGG 0.283013 2.3:-58096672 None:intergenic
CAGTGATGGACTTTCTTATA+AGG 0.284819 2.3:+58096579 MS.gene55899:CDS
CAATGTGAAGGAAGAGAATA+TGG 0.300905 2.3:+58096513 MS.gene55899:CDS
CTATTGTTTAATCAAGGTTT+TGG 0.313071 2.3:+58096673 MS.gene55899:CDS
TAATTAGGTAACTTTGGATT+AGG 0.313774 2.3:-58094503 None:intergenic
TTGTGGGCTTGGAGAAAATA+TGG 0.327482 2.3:+58095505 MS.gene55899:CDS
TCCTTCACATTGTTAACAAC+TGG 0.339482 2.3:-58096502 None:intergenic
TATGGTCAGAAGCCTATTAA+AGG 0.340677 2.3:+58095523 MS.gene55899:CDS
TCTCTTAAAGTTGAGAATAA+TGG 0.344831 2.3:-58094257 None:intergenic
TTCCTTCAGATTTGTGGGCT+TGG 0.351444 2.3:+58095494 MS.gene55899:CDS
ATCCATTTCATCTCTTTGAT+TGG 0.356655 2.3:+58096737 MS.gene55899:CDS
GCAGAAGGTTTAATTGGTCT+TGG 0.364059 2.3:-58094557 None:intergenic
TTTCATCTCTTTGATTGGTC+AGG 0.365054 2.3:+58096742 MS.gene55899:CDS
GACCAATCAAAGAGATGAAA+TGG 0.366081 2.3:-58096739 None:intergenic
GATTCATAATTAGGTAACTT+TGG 0.391610 2.3:-58094509 None:intergenic
TAGGTTATAACCAACATGTT+TGG 0.405752 2.3:-58096298 None:intergenic
GTGGTAATTCAAGTAATGAT+AGG 0.407677 2.3:+58096695 MS.gene55899:CDS
AAGTAGTTCCTTCAGATTTG+TGG 0.419426 2.3:+58095488 MS.gene55899:CDS
GCTAAGGCATTTCTTTGTGT+TGG 0.421980 2.3:-58096346 None:intergenic
AGTAGTTCCTTCAGATTTGT+GGG 0.437348 2.3:+58095489 MS.gene55899:CDS
TTAAACCTATTGTTTAATCA+AGG 0.440685 2.3:+58096667 MS.gene55899:CDS
ATCTCATCTTCAAGGAATAC+AGG 0.440973 2.3:+58094644 MS.gene55899:CDS
TGTCTACTATTTGCAGCTGC+TGG 0.441459 2.3:-58095457 None:intergenic
CTATTTGCAGCTGCTGGTGC+AGG 0.451080 2.3:-58095451 None:intergenic
GGAACAAACATGAACATGTT+TGG 0.451519 2.3:+58094230 MS.gene55899:CDS
ATAATCAGAGGTGGTACTGC+TGG 0.461238 2.3:+58094038 MS.gene55899:CDS
CTTAGCATTAATATTGATGT+TGG 0.461905 2.3:-58094591 None:intergenic
AAAGTAACTTACCTTGGATA+AGG 0.462105 2.3:-58095550 None:intergenic
GAGTTCAGATCTCATCTTCA+AGG 0.463546 2.3:+58094636 MS.gene55899:CDS
GCTGCAAATAGTAGACAAAC+TGG 0.465679 2.3:+58095463 MS.gene55899:CDS
TGGTTCTTCAAATGAGTTGT+TGG 0.473949 2.3:-58096779 None:intergenic
ATGAAATGGATCTAAAACCT+TGG 0.480200 2.3:-58096725 None:intergenic
AGTACTTGTGATGTTGAAGT+AGG 0.496007 2.3:-58094318 None:intergenic
GGTTTAATTGGTCTTGGAGA+AGG 0.498591 2.3:-58094551 None:intergenic
GCAACATCAATTATAGAAGC+AGG 0.500612 2.3:-58094356 None:intergenic
TATAGATGCAGCAGTTCAAA+GGG 0.512628 2.3:+58096235 MS.gene55899:CDS
CTACAAATTGAGATGGATGA+AGG 0.513528 2.3:+58096550 MS.gene55899:CDS
ACACAAAGAAATGCCTTAGC+AGG 0.514245 2.3:+58096349 MS.gene55899:CDS
TTATAGATGCAGCAGTTCAA+AGG 0.515496 2.3:+58096234 MS.gene55899:CDS
TTGGTTGAAATAACAGCAGA+AGG 0.519861 2.3:-58094572 None:intergenic
TCTGTTCTTGAAGACAATAG+AGG 0.525437 2.3:+58094206 MS.gene55899:CDS
CAACATCAATATTAATGCTA+AGG 0.530488 2.3:+58094592 MS.gene55899:CDS
GAACAGAAGAGAAACTCAAA+GGG 0.532880 2.3:-58094190 None:intergenic
TGGACTTTCTTATAAGGTGA+TGG 0.535954 2.3:+58096585 MS.gene55899:CDS
GCTGGAGCATATAGTAGTAC+AGG 0.537441 2.3:+58094056 MS.gene55899:CDS
AGATCTTGTTGATCCTGCTA+AGG 0.540077 2.3:-58096362 None:intergenic
GCATTTCTTTGTGTTGGCCA+TGG 0.541996 2.3:-58096340 None:intergenic
CTCCAAGCCCACAAATCTGA+AGG 0.549243 2.3:-58095496 None:intergenic
GAGAACAATAATAACAGTGA+TGG 0.557395 2.3:+58096469 MS.gene55899:CDS
TCCAGTTGTTAACAATGTGA+AGG 0.558008 2.3:+58096501 MS.gene55899:CDS
TTAAAGGTTCACCTTATCCA+AGG 0.571044 2.3:+58095539 MS.gene55899:CDS
TTGAAGAACCAAACAAGAGA+AGG 0.573435 2.3:+58096791 MS.gene55899:CDS
TGGTAATTCAAGTAATGATA+GGG 0.573489 2.3:+58096696 MS.gene55899:CDS
AGAACAGAAGAGAAACTCAA+AGG 0.577454 2.3:-58094191 None:intergenic
AGAGAAGCTACAAATTGAGA+TGG 0.578599 2.3:+58096543 MS.gene55899:CDS
CAGAACTGATCCAAACATGT+TGG 0.596203 2.3:+58096288 MS.gene55899:CDS
ATGATTGTGTTCTGAAGTGT+AGG 0.601847 2.3:-58096317 None:intergenic
GGAATACAGGTCTTAAACGA+AGG 0.603168 2.3:+58094657 MS.gene55899:CDS
ATCATGATCATGATAATCAG+TGG 0.603815 2.3:+58094120 MS.gene55899:CDS
GGAAAATAGCAAAATTCATG+AGG 0.604467 2.3:+58096606 MS.gene55899:CDS
GTTCAAAGGGATGTTCAGCT+AGG 0.605745 2.3:+58096248 MS.gene55899:CDS
TGATGATGATGTGAAACTGC+AGG 0.613240 2.3:-58094101 None:intergenic
GATGAAGGAGAATTCAGTGA+TGG 0.613782 2.3:+58096565 MS.gene55899:CDS
TAATGATAGGGATCAATCCA+AGG 0.614402 2.3:+58096708 MS.gene55899:CDS
ATGTTGAAGTAGGAAGAAGA+AGG 0.618243 2.3:-58094308 None:intergenic
CTTCAGAACACAATCATCCA+TGG 0.626675 2.3:+58096323 MS.gene55899:CDS
TCAAGTATGGACAATTACCT+AGG 0.636819 2.3:+58094002 MS.gene55899:CDS
GTTCTTGAAGACAATAGAGG+AGG 0.649107 2.3:+58094209 MS.gene55899:CDS
GATTTAACTGACATAATCAG+AGG 0.660960 2.3:+58094026 MS.gene55899:CDS
GATTCTCTTCTAGACAACAC+AGG 0.690701 2.3:+58094614 MS.gene55899:CDS
TTAACTGACATAATCAGAGG+TGG 0.698541 2.3:+58094029 MS.gene55899:CDS
TTATGTCAGTTAAATCACCT+AGG 0.732430 2.3:-58094019 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAACTATTAGATT+AGG - chr2.3:58095259-58095278 None:intergenic 10.0%
!!! TGTTTCTTATTATTATTTTT+TGG + chr2.3:58096195-58096214 MS.gene55899:intron 10.0%
!! TGAAATTAATTATAGTAACA+TGG - chr2.3:58094778-58094797 None:intergenic 15.0%
!! TGATTTATTCCAATTAAAAT+AGG - chr2.3:58095222-58095241 None:intergenic 15.0%
!!! ATTTTGAAGTAGAAATTTTA+TGG + chr2.3:58094839-58094858 MS.gene55899:intron 15.0%
!!! GTTTTTTTTATTTCCTTTTT+TGG + chr2.3:58095268-58095287 MS.gene55899:intron 15.0%
!! AAAAAAACATGTACCAAAAA+AGG - chr2.3:58095284-58095303 None:intergenic 20.0%
!! AAGGAAATGATTATAGTTAT+AGG - chr2.3:58095661-58095680 None:intergenic 20.0%
!! AATATTGTTACGAAACTTAA+AGG - chr2.3:58096080-58096099 None:intergenic 20.0%
!! TAGCAATTAAAAATACATTG+AGG + chr2.3:58095590-58095609 MS.gene55899:intron 20.0%
!! TCATTAATTGAAAACCTAAT+AGG - chr2.3:58095846-58095865 None:intergenic 20.0%
!! TCTAAAAATTAAAAGGACTA+TGG - chr2.3:58095182-58095201 None:intergenic 20.0%
!! TGATTAAACAATAGGTTTAA+TGG - chr2.3:58096667-58096686 None:intergenic 20.0%
!! TTAAACCTATTGTTTAATCA+AGG + chr2.3:58096667-58096686 MS.gene55899:CDS 20.0%
!! TTACAAGTAACAATATACAA+TGG - chr2.3:58095723-58095742 None:intergenic 20.0%
!! TTATTCCAATTAAAATAGGT+AGG - chr2.3:58095218-58095237 None:intergenic 20.0%
!!! AGGTTTTCAATTAATGAATA+CGG + chr2.3:58095849-58095868 MS.gene55899:intron 20.0%
!!! ATTATTTTTTGGTTGCTATT+AGG + chr2.3:58096206-58096225 MS.gene55899:intron 20.0%
!!! ATTTTCATATTCATTGATTG+AGG + chr2.3:58095882-58095901 MS.gene55899:intron 20.0%
!!! TGTATTAAGCAATTTTGATT+TGG + chr2.3:58095991-58096010 MS.gene55899:intron 20.0%
!!! TTATTTTTTGGTTGCTATTA+GGG + chr2.3:58096207-58096226 MS.gene55899:intron 20.0%
!!! TTGATTTGGTATATAATGTT+AGG + chr2.3:58096005-58096024 MS.gene55899:intron 20.0%
!!! TTGGTAGTCTAAAAATTAAA+AGG - chr2.3:58095189-58095208 None:intergenic 20.0%
!!! TTTAAGATAAGTTTCTTGAA+AGG - chr2.3:58095098-58095117 None:intergenic 20.0%
!!! TTTGAGAATATGTTTTTACA+TGG - chr2.3:58094467-58094486 None:intergenic 20.0%
! AGATAACAAAAACAACAACA+AGG + chr2.3:58095750-58095769 MS.gene55899:intron 25.0%
! CAAAACCTTGATTAAACAAT+AGG - chr2.3:58096675-58096694 None:intergenic 25.0%
! CAACATCAATATTAATGCTA+AGG + chr2.3:58094592-58094611 MS.gene55899:CDS 25.0%
! CTTAGCATTAATATTGATGT+TGG - chr2.3:58094594-58094613 None:intergenic 25.0%
! GATTCATAATTAGGTAACTT+TGG - chr2.3:58094512-58094531 None:intergenic 25.0%
! GTTGAAGAAGATTCATAATT+AGG - chr2.3:58094521-58094540 None:intergenic 25.0%
! GTTTAATTAAGAAGCCTATT+AGG + chr2.3:58095829-58095848 MS.gene55899:intron 25.0%
! TAATTAGGTAACTTTGGATT+AGG - chr2.3:58094506-58094525 None:intergenic 25.0%
! TCTCTTAAAGTTGAGAATAA+TGG - chr2.3:58094260-58094279 None:intergenic 25.0%
! TGATCAAGTTCTTGTAAAAA+TGG - chr2.3:58094284-58094303 None:intergenic 25.0%
! TGGTAATTCAAGTAATGATA+GGG + chr2.3:58096696-58096715 MS.gene55899:CDS 25.0%
! TTAGAGAGAGATTTCTTAAT+TGG - chr2.3:58095786-58095805 None:intergenic 25.0%
! TTGTGTAATGAATTAATTGC+AGG + chr2.3:58095398-58095417 MS.gene55899:intron 25.0%
!! CTATTGTTTAATCAAGGTTT+TGG + chr2.3:58096673-58096692 MS.gene55899:CDS 25.0%
!! TAAAATAGGTAGGTATGTTT+TGG - chr2.3:58095208-58095227 None:intergenic 25.0%
!!! ACATACCTACCTATTTTAAT+TGG + chr2.3:58095210-58095229 MS.gene55899:intron 25.0%
!!! CTTTGTAGAAGTATTGTTTT+TGG - chr2.3:58096395-58096414 None:intergenic 25.0%
!!! TATTTTTTGGTTGCTATTAG+GGG + chr2.3:58096208-58096227 MS.gene55899:intron 25.0%
AAACACAGTAGTACATTACA+AGG - chr2.3:58095680-58095699 None:intergenic 30.0%
AAAGTAACTTACCTTGGATA+AGG - chr2.3:58095553-58095572 None:intergenic 30.0%
AAGTACTATTGAGAGAAAGT+AGG + chr2.3:58094873-58094892 MS.gene55899:intron 30.0%
AAGTATTTGATTGGTGGAAA+TGG + chr2.3:58095355-58095374 MS.gene55899:intron 30.0%
AATACCTAAACGAGACTTAA+AGG - chr2.3:58096135-58096154 None:intergenic 30.0%
AGTACTATTGAGAGAAAGTA+GGG + chr2.3:58094874-58094893 MS.gene55899:intron 30.0%
ATAACAGCAGAAGGTTTAAT+TGG - chr2.3:58094566-58094585 None:intergenic 30.0%
ATCATGATCATGATAATCAG+TGG + chr2.3:58094120-58094139 MS.gene55899:CDS 30.0%
ATCCATTTCATCTCTTTGAT+TGG + chr2.3:58096737-58096756 MS.gene55899:CDS 30.0%
GAAACAATGTCAAAACCTAA+CGG - chr2.3:58096104-58096123 None:intergenic 30.0%
GAGAACAATAATAACAGTGA+TGG + chr2.3:58096469-58096488 MS.gene55899:CDS 30.0%
GATTTAACTGACATAATCAG+AGG + chr2.3:58094026-58094045 MS.gene55899:CDS 30.0%
GGAAAATAGCAAAATTCATG+AGG + chr2.3:58096606-58096625 MS.gene55899:CDS 30.0%
GTGGTAATTCAAGTAATGAT+AGG + chr2.3:58096695-58096714 MS.gene55899:CDS 30.0%
GTTATCAAGACTATAACATG+TGG + chr2.3:58094975-58094994 MS.gene55899:intron 30.0%
TAAAGGACTAATCTGATACA+GGG - chr2.3:58096063-58096082 None:intergenic 30.0%
TAGGTTATAACCAACATGTT+TGG - chr2.3:58096301-58096320 None:intergenic 30.0%
TCTAAGAAAGTAACTTACCT+TGG - chr2.3:58095559-58095578 None:intergenic 30.0%
TTAAAGGACTAATCTGATAC+AGG - chr2.3:58096064-58096083 None:intergenic 30.0%
TTATGTCAGTTAAATCACCT+AGG - chr2.3:58094022-58094041 None:intergenic 30.0%
TTCGTAACAATATTTCCGTT+AGG + chr2.3:58096086-58096105 MS.gene55899:intron 30.0%
! ATAATTGATGTTGCTTCTTC+TGG + chr2.3:58094365-58094384 MS.gene55899:CDS 30.0%
! ATGAAATGGATCTAAAACCT+TGG - chr2.3:58096728-58096747 None:intergenic 30.0%
! CATGTGGTTTAATTTCTTTG+AGG + chr2.3:58094991-58095010 MS.gene55899:intron 30.0%
! CTTTGTTTCTTCATCAAGTA+TGG + chr2.3:58093989-58094008 MS.gene55899:CDS 30.0%
! TCAAAGGAATAGGAATTTTC+AGG - chr2.3:58095142-58095161 None:intergenic 30.0%
! TGAAGAGTGAAGTATTTGAT+TGG + chr2.3:58095346-58095365 MS.gene55899:intron 30.0%
! TTGTTCTCTTGTTCTTCTTT+TGG - chr2.3:58096457-58096476 None:intergenic 30.0%
! TTTTTGTGCATGATGATCAA+AGG - chr2.3:58095158-58095177 None:intergenic 30.0%
!! GTTTTGACATTGTTTCAGAT+TGG + chr2.3:58096108-58096127 MS.gene55899:intron 30.0%
!! TTGTTTAATCAAGGTTTTGG+TGG + chr2.3:58096676-58096695 MS.gene55899:CDS 30.0%
!!! GTAGAAGTATTGTTTTTGGA+TGG - chr2.3:58096391-58096410 None:intergenic 30.0%
!!! TAGGAATTTTCAGGTAGTTA+TGG - chr2.3:58095133-58095152 None:intergenic 30.0%
AAGTAGTTCCTTCAGATTTG+TGG + chr2.3:58095488-58095507 MS.gene55899:CDS 35.0%
AGAACAGAAGAGAAACTCAA+AGG - chr2.3:58094194-58094213 None:intergenic 35.0%
AGAGAAGCTACAAATTGAGA+TGG + chr2.3:58096543-58096562 MS.gene55899:CDS 35.0%
AGTACTTGTGATGTTGAAGT+AGG - chr2.3:58094321-58094340 None:intergenic 35.0%
AGTAGTTCCTTCAGATTTGT+GGG + chr2.3:58095489-58095508 MS.gene55899:CDS 35.0%
ATCTCATCTTCAAGGAATAC+AGG + chr2.3:58094644-58094663 MS.gene55899:CDS 35.0%
ATGTTGAAGTAGGAAGAAGA+AGG - chr2.3:58094311-58094330 None:intergenic 35.0%
CAAAAACAACAACAAGGCTT+AGG + chr2.3:58095756-58095775 MS.gene55899:intron 35.0%
CAATGGTCAAGCTAAAAATG+TGG - chr2.3:58095706-58095725 None:intergenic 35.0%
CAATGTGAAGGAAGAGAATA+TGG + chr2.3:58096513-58096532 MS.gene55899:CDS 35.0%
CAGGAAGAATCAAGCAAAAA+AGG + chr2.3:58095417-58095436 MS.gene55899:intron 35.0%
CTACAAATTGAGATGGATGA+AGG + chr2.3:58096550-58096569 MS.gene55899:CDS 35.0%
GAACAGAAGAGAAACTCAAA+GGG - chr2.3:58094193-58094212 None:intergenic 35.0%
GAAGAATCAAGCAAAAAAGG+TGG + chr2.3:58095420-58095439 MS.gene55899:CDS 35.0%
GACCAATCAAAGAGATGAAA+TGG - chr2.3:58096742-58096761 None:intergenic 35.0%
GCAACATCAATTATAGAAGC+AGG - chr2.3:58094359-58094378 None:intergenic 35.0%
GGAACAAACATGAACATGTT+TGG + chr2.3:58094230-58094249 MS.gene55899:CDS 35.0%
GGATAAGGTGAACCTTTAAT+AGG - chr2.3:58095538-58095557 None:intergenic 35.0%
TAATGATAGGGATCAATCCA+AGG + chr2.3:58096708-58096727 MS.gene55899:CDS 35.0%
TATAGATGCAGCAGTTCAAA+GGG + chr2.3:58096235-58096254 MS.gene55899:CDS 35.0%
TATGGTCAGAAGCCTATTAA+AGG + chr2.3:58095523-58095542 MS.gene55899:CDS 35.0%
TATTGAGAGAAAGTAGGGTT+TGG + chr2.3:58094879-58094898 MS.gene55899:intron 35.0%
TCAAGTATGGACAATTACCT+AGG + chr2.3:58094002-58094021 MS.gene55899:CDS 35.0%
TCCAGTTGTTAACAATGTGA+AGG + chr2.3:58096501-58096520 MS.gene55899:CDS 35.0%
TCCTTCACATTGTTAACAAC+TGG - chr2.3:58096505-58096524 None:intergenic 35.0%
TCTGTTCTTGAAGACAATAG+AGG + chr2.3:58094206-58094225 MS.gene55899:CDS 35.0%
TGCATGATGATCAAAGGAAT+AGG - chr2.3:58095152-58095171 None:intergenic 35.0%
TGGACTTTCTTATAAGGTGA+TGG + chr2.3:58096585-58096604 MS.gene55899:CDS 35.0%
TGGTTCTTCAAATGAGTTGT+TGG - chr2.3:58096782-58096801 None:intergenic 35.0%
TTAAAGGTTCACCTTATCCA+AGG + chr2.3:58095539-58095558 MS.gene55899:CDS 35.0%
TTAACTGACATAATCAGAGG+TGG + chr2.3:58094029-58094048 MS.gene55899:CDS 35.0%
TTATAGATGCAGCAGTTCAA+AGG + chr2.3:58096234-58096253 MS.gene55899:CDS 35.0%
TTGAAGAACCAAACAAGAGA+AGG + chr2.3:58096791-58096810 MS.gene55899:CDS 35.0%
TTGGTTGAAATAACAGCAGA+AGG - chr2.3:58094575-58094594 None:intergenic 35.0%
! AGAGTGAAGTATTTGATTGG+TGG + chr2.3:58095349-58095368 MS.gene55899:intron 35.0%
! TTTCATCTCTTTGATTGGTC+AGG + chr2.3:58096742-58096761 MS.gene55899:CDS 35.0%
!! AGAAGCTAACTCTACTTTTC+AGG - chr2.3:58095038-58095057 None:intergenic 35.0%
!! ATGATTGTGTTCTGAAGTGT+AGG - chr2.3:58096320-58096339 None:intergenic 35.0%
!! CAGTGATGGACTTTCTTATA+AGG + chr2.3:58096579-58096598 MS.gene55899:CDS 35.0%
!!! GAGGACTTTTTTGCTGAATT+GGG + chr2.3:58096625-58096644 MS.gene55899:CDS 35.0%
!!! TGAGGACTTTTTTGCTGAAT+TGG + chr2.3:58096624-58096643 MS.gene55899:CDS 35.0%
ACACAAAGAAATGCCTTAGC+AGG + chr2.3:58096349-58096368 MS.gene55899:CDS 40.0%
ACTACACGTGGCACTATTAA+TGG + chr2.3:58094935-58094954 MS.gene55899:intron 40.0%
AGATCTTGTTGATCCTGCTA+AGG - chr2.3:58096365-58096384 None:intergenic 40.0%
AGTAGGGTTTGGCATAAGTT+AGG + chr2.3:58094890-58094909 MS.gene55899:intron 40.0%
CAGAACTGATCCAAACATGT+TGG + chr2.3:58096288-58096307 MS.gene55899:CDS 40.0%
CTTCAGAACACAATCATCCA+TGG + chr2.3:58096323-58096342 MS.gene55899:CDS 40.0%
GAGTTCAGATCTCATCTTCA+AGG + chr2.3:58094636-58094655 MS.gene55899:CDS 40.0%
GATACAGGGTCGAAACTTAA+AGG - chr2.3:58096049-58096068 None:intergenic 40.0%
GATGAAGGAGAATTCAGTGA+TGG + chr2.3:58096565-58096584 MS.gene55899:CDS 40.0%
GATTCTCTTCTAGACAACAC+AGG + chr2.3:58094614-58094633 MS.gene55899:CDS 40.0%
GCTGCAAATAGTAGACAAAC+TGG + chr2.3:58095463-58095482 MS.gene55899:CDS 40.0%
GGAATACAGGTCTTAAACGA+AGG + chr2.3:58094657-58094676 MS.gene55899:CDS 40.0%
GTTCTTGAAGACAATAGAGG+AGG + chr2.3:58094209-58094228 MS.gene55899:CDS 40.0%
TGGTCCTTTAAGTCTCGTTT+AGG + chr2.3:58096128-58096147 MS.gene55899:intron 40.0%
TTGTGGGCTTGGAGAAAATA+TGG + chr2.3:58095505-58095524 MS.gene55899:CDS 40.0%
! CTTTTTCTTGTGACTACACG+TGG + chr2.3:58094923-58094942 MS.gene55899:intron 40.0%
! GCAGAAGGTTTAATTGGTCT+TGG - chr2.3:58094560-58094579 None:intergenic 40.0%
! GCTAAGGCATTTCTTTGTGT+TGG - chr2.3:58096349-58096368 None:intergenic 40.0%
! TGATGATGATGTGAAACTGC+AGG - chr2.3:58094104-58094123 None:intergenic 40.0%
!! GGTTTAATTGGTCTTGGAGA+AGG - chr2.3:58094554-58094573 None:intergenic 40.0%
!!! GGCTTTGTTGTGTCATTTTG+TGG - chr2.3:58096436-58096455 None:intergenic 40.0%
ATAATCAGAGGTGGTACTGC+TGG + chr2.3:58094038-58094057 MS.gene55899:CDS 45.0%
GCTGGAGCATATAGTAGTAC+AGG + chr2.3:58094056-58094075 MS.gene55899:CDS 45.0%
GTTCAAAGGGATGTTCAGCT+AGG + chr2.3:58096248-58096267 MS.gene55899:CDS 45.0%
TGTCTACTATTTGCAGCTGC+TGG - chr2.3:58095460-58095479 None:intergenic 45.0%
TTCCTTCAGATTTGTGGGCT+TGG + chr2.3:58095494-58095513 MS.gene55899:CDS 45.0%
! GCATTTCTTTGTGTTGGCCA+TGG - chr2.3:58096343-58096362 None:intergenic 45.0%
CTCCAAGCCCACAAATCTGA+AGG - chr2.3:58095499-58095518 None:intergenic 50.0%
CTATTTGCAGCTGCTGGTGC+AGG - chr2.3:58095454-58095473 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 58093978 58096819 58093978 ID=MS.gene55899
chr2.3 mRNA 58093978 58096819 58093978 ID=MS.gene55899.t1;Parent=MS.gene55899
chr2.3 exon 58093978 58094678 58093978 ID=MS.gene55899.t1.exon1;Parent=MS.gene55899.t1
chr2.3 CDS 58093978 58094678 58093978 ID=cds.MS.gene55899.t1;Parent=MS.gene55899.t1
chr2.3 exon 58095420 58095560 58095420 ID=MS.gene55899.t1.exon2;Parent=MS.gene55899.t1
chr2.3 CDS 58095420 58095560 58095420 ID=cds.MS.gene55899.t1;Parent=MS.gene55899.t1
chr2.3 exon 58096228 58096819 58096228 ID=MS.gene55899.t1.exon3;Parent=MS.gene55899.t1
chr2.3 CDS 58096228 58096819 58096228 ID=cds.MS.gene55899.t1;Parent=MS.gene55899.t1
Gene Sequence

>MS.gene55899

ATGTGTAGTATCTTTGTTTCTTCATCAAGTATGGACAATTACCTAGGTGATTTAACTGACATAATCAGAGGTGGTACTGCTGGAGCATATAGTAGTACAGGAACTTCATCATCATCTGCTGAACCTGCAGTTTCACATCATCATCATGATCATGATAATCAGTGGAATCATCATCATCATAATCATCAATTCTCTTCTGATCATCATCATCACCCTTTGAGTTTCTCTTCTGTTCTTGAAGACAATAGAGGAGGAACAAACATGAACATGTTTGGTGATCCATTATTCTCAACTTTAAGAGATCCATTTTTACAAGAACTTGATCATATACCTTCTTCTTCCTACTTCAACATCACAAGTACTACTAGTACTACTTCACCTGCTTCTATAATTGATGTTGCTTCTTCTGGTGTTAGTGTTACTACTTCATCATCTTCTTCTGCTTCTGTTTTTGCACTTGATCATGAGATGAGATCAATATCAAGACCATGTAAAAACATATTCTCAAATATGATTCAGATCTCTCCTAATCCAAAGTTACCTAATTATGAATCTTCTTCAACAATAGCAGCACCTTCTCCAAGACCAATTAAACCTTCTGCTGTTATTTCAACCAACATCAATATTAATGCTAAGGATTCTCTTCTAGACAACACAGGAGTTCAGATCTCATCTTCAAGGAATACAGGTCTTAAACGAAGGTAAGATCAGACATTATATTATATTATCTGCTTAATTAATTAATATTAATAATTAATGTCATTGAATATAAGAGAATCAAATTAATTTATGCTTGTCCATGTTACTATAATTAATTTCATGCTGATGAATCAATCACATACTAGTACTTTTTTTTTTTTGATTTTGAAGTAGAAATTTTATGGTGATTTTTTTGAAGTACTATTGAGAGAAAGTAGGGTTTGGCATAAGTTAGGCACTTTGTTTCTTTTTCTTGTGACTACACGTGGCACTATTAATGGTTTATATTGAGAAGAAAGTTATCAAGACTATAACATGTGGTTTAATTTCTTTGAGGCTTTTCATAAATTAAAATTCACCTGAAAAGTAGAGTTAGCTTCTTGTCACACATAATTAAAATGACAGTCACAGAGACTGACCTTTCAAGAAACTTATCTTAAACTTACTTTTCTTCCATAACTACCTGAAAATTCCTATTCCTTTGATCATCATGCACAAAAAACCATAGTCCTTTTAATTTTTAGACTACCAAAACATACCTACCTATTTTAATTGGAATAAATCAAATTAAATAGATAGCCTAATCTAATAGTTTTTTTTATTTCCTTTTTTGGTACATGTTTTTTTTTAATGTCTATATGATAGTATTCTTATTATTTCTTGCATATGTGAAGAGTGAAGTATTTGATTGGTGGAAATGGTAAATAACTATTTATTATTTTTGTGTAATGAATTAATTGCAGGAAGAATCAAGCAAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAATAGTAGACAAACTGGAGAAGTAGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAGCCTATTAAAGGTTCACCTTATCCAAGGTAAGTTACTTTCTTAGAAGTACATAATTTAGCAATTAAAAATACATTGAGGCAAAGCTTCTTGATATTATTAAATCATCATGTTTGACTTGACTTACCTATAACTATAATCATTTCCTTGTAATGTACTACTGTGTTTCTTCCACATTTTTAGCTTGACCATTGTATATTGTTACTTGTAACACATTGAGATAACAAAAACAACAACAAGGCTTAGGTCTTCCAATTAAGAAATCTCTCTCTAATTGCTACTAGTATATTATTAAGAGTTTAATTAAGAAGCCTATTAGGTTTTCAATTAATGAATACGGCAATTGATCTATTTTCATATTCATTGATTGAGGTGACAATACATGATTGTATGTATGCGTAAAATAATAGTATAATGAGAGAATATGCTAATTAAATTCTTTTATTAAAATAAATTTATTGTATTAAGCAATTTTGATTTGGTATATAATGTTAGGAAAAACTGCACATTTCATCCTTTAAGTTTCGACCCTGTATCAGATTAGTCCTTTAAGTTTCGTAACAATATTTCCGTTAGGTTTTGACATTGTTTCAGATTGGTCCTTTAAGTCTCGTTTAGGTATTATGTTACAATGTTTCTTCTTGTTCAAAAAAAATGTTACAATGTTTCTTATTATTATTTTTTGGTTGCTATTAGGGGTTATTATAGATGCAGCAGTTCAAAGGGATGTTCAGCTAGGAAACAAGTTGAGAGAAGCAGAACTGATCCAAACATGTTGGTTATAACCTACACTTCAGAACACAATCATCCATGGCCAACACAAAGAAATGCCTTAGCAGGATCAACAAGATCTCAACCATCCAAAAACAATACTTCTACAAAGAATTCAGAAACATCACAGCCACAAAATGACACAACAAAGCCAAAAGAAGAACAAGAGAACAATAATAACAGTGATGGAAATGATTCTCCAGTTGTTAACAATGTGAAGGAAGAGAATATGGAAGATATAGAGAAGCTACAAATTGAGATGGATGAAGGAGAATTCAGTGATGGACTTTCTTATAAGGTGATGGAAAATAGCAAAATTCATGAGGACTTTTTTGCTGAATTGGGTGAAATTGAAACTGATCCATTAAACCTATTGTTTAATCAAGGTTTTGGTGGTAATTCAAGTAATGATAGGGATCAATCCAAGGTTTTAGATCCATTTCATCTCTTTGATTGGTCAGGTGATAACAACAATACCAACAACTCATTTGAAGAACCAAACAAGAGAAGGCTATGA

Protein sequence

>MS.gene55899.t1

MCSIFVSSSSMDNYLGDLTDIIRGGTAGAYSSTGTSSSSAEPAVSHHHHDHDNQWNHHHHNHQFSSDHHHHPLSFSSVLEDNRGGTNMNMFGDPLFSTLRDPFLQELDHIPSSSYFNITSTTSTTSPASIIDVASSGVSVTTSSSSSASVFALDHEMRSISRPCKNIFSNMIQISPNPKLPNYESSSTIAAPSPRPIKPSAVISTNININAKDSLLDNTGVQISSSRNTGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNTSTKNSETSQPQNDTTKPKEEQENNNNSDGNDSPVVNNVKEENMEDIEKLQIEMDEGEFSDGLSYKVMENSKIHEDFFAELGEIETDPLNLLFNQGFGGNSSNDRDQSKVLDPFHLFDWSGDNNNTNNSFEEPNKRRL