Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055477.t1 | XP_013458562.1 | 94.2 | 327 | 1 | 1 | 1 | 309 | 1 | 327 | 2.50E-155 | 558.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055477.t1 | P26360 | 80.1 | 327 | 46 | 3 | 1 | 309 | 1 | 326 | 1.4e-135 | 483.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055477.t1 | A0A072UU27 | 94.2 | 327 | 1 | 1 | 1 | 309 | 1 | 327 | 1.8e-155 | 558.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055477 | MS.gene57960 | 0.857186 | 1.94E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055477 | MS.gene71744 | PPI |
| MS.gene029508 | MS.gene055477 | PPI |
| MS.gene055477 | MS.gene75018 | PPI |
| MS.gene055477 | MS.gene002950 | PPI |
| MS.gene75019 | MS.gene055477 | PPI |
| MS.gene02393 | MS.gene055477 | PPI |
| MS.gene029511 | MS.gene055477 | PPI |
| MS.gene029509 | MS.gene055477 | PPI |
| MS.gene055477 | MS.gene73458 | PPI |
| MS.gene055477 | MS.gene029510 | PPI |
| MS.gene055477 | MS.gene00829 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055477.t1 | MTR_4g129790 | 94.190 | 327 | 1 | 1 | 1 | 309 | 1 | 327 | 0.0 | 614 |
| MS.gene055477.t1 | MTR_3g052270 | 28.395 | 324 | 176 | 10 | 34 | 307 | 30 | 347 | 1.66e-25 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055477.t1 | AT2G33040 | 78.571 | 322 | 53 | 2 | 1 | 307 | 1 | 321 | 0.0 | 513 |
| MS.gene055477.t1 | AT4G04640 | 30.189 | 318 | 175 | 8 | 34 | 306 | 56 | 371 | 1.06e-29 | 116 |
| MS.gene055477.t1 | AT1G15700 | 28.000 | 325 | 176 | 9 | 34 | 307 | 66 | 383 | 2.19e-25 | 104 |
Find 69 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTCTATTTCCACTCAAAT+TGG | 0.218648 | 8.3:-1745590 | MS.gene055477:intron |
| ACATACTTTGTCTCTTTATC+AGG | 0.264351 | 8.3:+1744472 | None:intergenic |
| GCCTTGAGCAAGTTGAATTC+TGG | 0.280287 | 8.3:-1744781 | MS.gene055477:intron |
| TGCAGAGATCAATCTTCTAT+TGG | 0.301364 | 8.3:-1745620 | MS.gene055477:intron |
| TGGTTTGTGGCAGCCATTTA+CGG | 0.342195 | 8.3:-1745323 | MS.gene055477:CDS |
| AGAGACAAAGTATGTCATAT+TGG | 0.347992 | 8.3:-1744464 | MS.gene055477:CDS |
| TTGTACGTACGCAAGAAAAC+TGG | 0.369183 | 8.3:+1743314 | None:intergenic |
| GTCTGACCCTCACTTATAAT+AGG | 0.386053 | 8.3:-1741283 | MS.gene055477:intron |
| GAGACAAAGTATGTCATATT+GGG | 0.404543 | 8.3:-1744463 | MS.gene055477:CDS |
| TCACCGAGAAGAGCCGTAAA+TGG | 0.407251 | 8.3:+1745310 | None:intergenic |
| CAGCCATTTACGGCTCTTCT+CGG | 0.412957 | 8.3:-1745313 | MS.gene055477:CDS |
| CTGAAAATTCACGTGGTTTG+TGG | 0.419923 | 8.3:-1745336 | MS.gene055477:CDS |
| GACAGCTCTAGCAGGAATGC+TGG | 0.431443 | 8.3:-1741320 | MS.gene055477:CDS |
| TGGAGGAAGTCTCGGTGAAC+TGG | 0.443236 | 8.3:-1743398 | MS.gene055477:CDS |
| CCTTGCTCCTTGCTCACTGC+AGG | 0.446628 | 8.3:+1741355 | None:intergenic |
| GAATTGATTGAGATTATCTC+TGG | 0.446916 | 8.3:-1741081 | MS.gene055477:CDS |
| TCTTCAGACAAAGGCCTTTG+TGG | 0.448656 | 8.3:-1744838 | MS.gene055477:CDS |
| TTGTTTGTGCAGTGAGAAAT+CGG | 0.465696 | 8.3:-1745444 | MS.gene055477:intron |
| CTGGATTCGTATGAGATTGA+AGG | 0.483416 | 8.3:-1743379 | MS.gene055477:CDS |
| CCACGTCTGTCAAGATAAGC+AGG | 0.495862 | 8.3:-1744804 | MS.gene055477:CDS |
| AGAGATCAATCTTCTATTGG+AGG | 0.496751 | 8.3:-1745617 | MS.gene055477:CDS |
| ACAGCTCTAGCAGGAATGCT+GGG | 0.501839 | 8.3:-1741319 | MS.gene055477:CDS |
| CATGTAGATTGTTGAAAGAG+AGG | 0.506420 | 8.3:-1743428 | MS.gene055477:intron |
| AAGGCCTTTGTCTGAAGAAA+CGG | 0.508427 | 8.3:+1744843 | None:intergenic |
| GTTGAAAGAGAGGCTGAAGC+TGG | 0.508534 | 8.3:-1743418 | MS.gene055477:CDS |
| AACTACGTGCTGTTCAAACC+AGG | 0.516036 | 8.3:-1745360 | MS.gene055477:CDS |
| CTGCCATGGACAGCTCTAGC+AGG | 0.525991 | 8.3:-1741328 | MS.gene055477:CDS |
| GAATATTCAGAAAATTACTA+AGG | 0.532506 | 8.3:-1745407 | MS.gene055477:CDS |
| GCTGAAGCTGGAGGAAGTCT+CGG | 0.540570 | 8.3:-1743406 | MS.gene055477:CDS |
| TCTGGAGCATCAGCACTGAC+AGG | 0.540615 | 8.3:-1741063 | MS.gene055477:CDS |
| GCTGCTGCACTCCGACGCGA+AGG | 0.542082 | 8.3:-1745797 | MS.gene055477:CDS |
| AATTACTAAGGCTATGAAGA+TGG | 0.542804 | 8.3:-1745395 | MS.gene055477:CDS |
| TGGATTCGTATGAGATTGAA+GGG | 0.556021 | 8.3:-1743378 | MS.gene055477:CDS |
| AATGAAAGTACCAATTTGAG+TGG | 0.558490 | 8.3:+1745580 | None:intergenic |
| GTATGTCATATTGGGAGAGA+AGG | 0.558989 | 8.3:-1744455 | MS.gene055477:CDS |
| TCAGACAAAGGCCTTTGTGG+TGG | 0.560691 | 8.3:-1744835 | MS.gene055477:CDS |
| GAGAATGCCTGCAGTGAGCA+AGG | 0.566041 | 8.3:-1741362 | MS.gene055477:CDS |
| AAAGATACCTATTATAAGTG+AGG | 0.568709 | 8.3:+1741276 | None:intergenic |
| CTGCTGCACTCCGACGCGAA+GGG | 0.583053 | 8.3:-1745796 | MS.gene055477:CDS |
| AAGATACCTATTATAAGTGA+GGG | 0.587593 | 8.3:+1741277 | None:intergenic |
| GGTCATGTTCAATGCGGTGT+TGG | 0.590854 | 8.3:-1741384 | MS.gene055477:CDS |
| CGTTGTACAATTTCTACCAA+CGG | 0.590879 | 8.3:-1743672 | MS.gene055477:CDS |
| GATAATCTCAATCAATTCAG+TGG | 0.592679 | 8.3:+1741086 | None:intergenic |
| AGGAGCAAGGATGTCTGCCA+TGG | 0.594950 | 8.3:-1741342 | MS.gene055477:CDS |
| GAATCTCAAATCGATGGCGA+TGG | 0.602234 | 8.3:-1745819 | None:intergenic |
| GAATCCTCTGAATTATACTC+AGG | 0.606536 | 8.3:-1744368 | MS.gene055477:intron |
| ATTCCTGCTAGAGCTGTCCA+TGG | 0.613830 | 8.3:+1741325 | None:intergenic |
| GAAAGAGAGGCTGAAGCTGG+AGG | 0.621120 | 8.3:-1743415 | MS.gene055477:CDS |
| ATTACCGTTTCTTCAGACAA+AGG | 0.623581 | 8.3:-1744847 | MS.gene055477:CDS |
| CCTGCAGTGAGCAAGGAGCA+AGG | 0.624108 | 8.3:-1741355 | MS.gene055477:CDS |
| CTAACCTGAGTATAATTCAG+AGG | 0.633689 | 8.3:+1744364 | None:intergenic |
| CAGCTCTAGCAGGAATGCTG+GGG | 0.652373 | 8.3:-1741318 | MS.gene055477:CDS |
| CATATTGGGAGAGAAGGCTA+AGG | 0.655816 | 8.3:-1744449 | MS.gene055477:CDS |
| CCTGCTTATCTTGACAGACG+TGG | 0.656536 | 8.3:+1744804 | None:intergenic |
| ACCAGAATTCAACTTGCTCA+AGG | 0.662579 | 8.3:+1744780 | None:intergenic |
| TACGCAAGAAAACTGGAACT+CGG | 0.672354 | 8.3:+1743321 | None:intergenic |
| CACGTCTGTCAAGATAAGCA+GGG | 0.673248 | 8.3:-1744803 | MS.gene055477:CDS |
| CTAAACGCTTCCCTTCGCGT+CGG | 0.678943 | 8.3:+1745786 | None:intergenic |
| ACCAGGGCTGAAAATTCACG+TGG | 0.682606 | 8.3:-1745343 | MS.gene055477:CDS |
| GGTGGTTGGGAAGACATGAG+AGG | 0.683704 | 8.3:+1745761 | None:intergenic |
| GATAGTATAGTTGACACCGT+TGG | 0.683787 | 8.3:+1743656 | None:intergenic |
| TGGAGTTGATTCCACCACAA+AGG | 0.684718 | 8.3:+1744824 | None:intergenic |
| GGATTCGTATGAGATTGAAG+GGG | 0.696951 | 8.3:-1743377 | MS.gene055477:CDS |
| ACTACGTGCTGTTCAAACCA+GGG | 0.699734 | 8.3:-1745359 | MS.gene055477:CDS |
| GATTCGTATGAGATTGAAGG+GGG | 0.707101 | 8.3:-1743376 | MS.gene055477:CDS |
| CGTTGGTAGAAATTGTACAA+CGG | 0.712891 | 8.3:+1743673 | None:intergenic |
| TATATAGGTCATGTTCAATG+CGG | 0.738383 | 8.3:-1741390 | MS.gene055477:intron |
| AATAGATGAAAGTACCTCGG+GGG | 0.741176 | 8.3:+1743634 | None:intergenic |
| ACGTGGAGTATGATGCACTG+AGG | 0.781586 | 8.3:-1743718 | MS.gene055477:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAAAAGAATAATAATT+AGG | + | chr8.3:1741324-1741343 | None:intergenic | 10.0% |
| !! | AATGAAAAGAATAATAATTA+GGG | + | chr8.3:1741323-1741342 | None:intergenic | 10.0% |
| !! | AACAATTAAAACTAAACAAT+GGG | + | chr8.3:1743086-1743105 | None:intergenic | 15.0% |
| !! | CAAATTGTAACAAAATAAAA+AGG | + | chr8.3:1741611-1741630 | None:intergenic | 15.0% |
| !! | TTAAGGAATATTGAAAAATA+TGG | - | chr8.3:1742593-1742612 | MS.gene055477:intron | 15.0% |
| !! | TTGAAATTATATACAACATT+CGG | - | chr8.3:1744664-1744683 | MS.gene055477:intron | 15.0% |
| !!! | AATGTTTAAATAGCTTATTT+TGG | + | chr8.3:1742973-1742992 | None:intergenic | 15.0% |
| !!! | ATACTTTATTTGTTGTATAT+AGG | - | chr8.3:1745460-1745479 | MS.gene055477:intron | 15.0% |
| !!! | ATGTTTAAATAGCTTATTTT+GGG | + | chr8.3:1742972-1742991 | None:intergenic | 15.0% |
| !!! | TCCTAAATTAAATTGTTTTA+AGG | - | chr8.3:1742576-1742595 | MS.gene055477:intron | 15.0% |
| !!! | TCCTTAAAACAATTTAATTT+AGG | + | chr8.3:1742580-1742599 | None:intergenic | 15.0% |
| !! | AAGTATAAAAGAAACGAAAA+AGG | + | chr8.3:1744927-1744946 | None:intergenic | 20.0% |
| !! | AGATATATATGTAAAACACA+AGG | + | chr8.3:1742661-1742680 | None:intergenic | 20.0% |
| !! | ATAAGTATAATTTGAAAGAG+AGG | + | chr8.3:1745434-1745453 | None:intergenic | 20.0% |
| !! | CAACAATTAAAACTAAACAA+TGG | + | chr8.3:1743087-1743106 | None:intergenic | 20.0% |
| !! | CGAAATAACTAAGTATAAAT+AGG | + | chr8.3:1744239-1744258 | None:intergenic | 20.0% |
| !! | CGTTATCTTATAAACAATTT+AGG | + | chr8.3:1742290-1742309 | None:intergenic | 20.0% |
| !! | GAATATTCAGAAAATTACTA+AGG | - | chr8.3:1741458-1741477 | MS.gene055477:intron | 20.0% |
| !! | TAACTAAGTATAAATAGGTA+CGG | + | chr8.3:1744234-1744253 | None:intergenic | 20.0% |
| !! | TAGAATATAAAATGCTATCT+GGG | - | chr8.3:1743757-1743776 | MS.gene055477:intron | 20.0% |
| !! | TGTTAGATTTATGATGAATT+AGG | - | chr8.3:1741356-1741375 | MS.gene055477:CDS | 20.0% |
| !! | TTAAGATGATTATGATTTCA+TGG | - | chr8.3:1743953-1743972 | MS.gene055477:intron | 20.0% |
| !! | TTCAATATTCAACAACAAAA+AGG | + | chr8.3:1742845-1742864 | None:intergenic | 20.0% |
| !! | TTGAAAACAAAGTTTACAAT+TGG | - | chr8.3:1742680-1742699 | MS.gene055477:intron | 20.0% |
| !! | TTTATCATTATAAACTTGAC+AGG | + | chr8.3:1745134-1745153 | None:intergenic | 20.0% |
| !!! | AAAACTTATTTTGCAATATC+AGG | - | chr8.3:1743362-1743381 | MS.gene055477:CDS | 20.0% |
| !!! | AATAAATTTTGACTGTGTTA+TGG | - | chr8.3:1741388-1741407 | MS.gene055477:intron | 20.0% |
| !!! | AATTTTAAAAAATGAAGGTC+CGG | + | chr8.3:1744435-1744454 | None:intergenic | 20.0% |
| !!! | GTTTTAATTGTTGTATTTTC+AGG | - | chr8.3:1743094-1743113 | MS.gene055477:intron | 20.0% |
| !!! | TATTGCAAAATAAGTTTTCA+TGG | + | chr8.3:1743360-1743379 | None:intergenic | 20.0% |
| !!! | TGTTTAAATAGCTTATTTTG+GGG | + | chr8.3:1742971-1742990 | None:intergenic | 20.0% |
| !!! | TTTAGACAAAATTTTTGTTC+TGG | - | chr8.3:1745650-1745669 | MS.gene055477:intron | 20.0% |
| !!! | TTTTGATCAAAATAGTAGAA+GGG | - | chr8.3:1744317-1744336 | MS.gene055477:intron | 20.0% |
| ! | AAAATTTGGTATAGAGAGTA+AGG | + | chr8.3:1743818-1743837 | None:intergenic | 25.0% |
| ! | AAAGATACCTATTATAAGTG+AGG | + | chr8.3:1745592-1745611 | None:intergenic | 25.0% |
| ! | AAGATACCTATTATAAGTGA+GGG | + | chr8.3:1745591-1745610 | None:intergenic | 25.0% |
| ! | AATCAATAAGCACAATATTC+AGG | + | chr8.3:1745332-1745351 | None:intergenic | 25.0% |
| ! | ACTAATTCAAATTGACGAAA+TGG | + | chr8.3:1743624-1743643 | None:intergenic | 25.0% |
| ! | AGCTATTTAAACATTCATTG+TGG | - | chr8.3:1742978-1742997 | MS.gene055477:intron | 25.0% |
| ! | ATAATATGGGTGAAGTAATA+AGG | - | chr8.3:1744780-1744799 | MS.gene055477:intron | 25.0% |
| ! | ATCATAATCATCTTAATGCA+AGG | + | chr8.3:1743949-1743968 | None:intergenic | 25.0% |
| ! | ATTAGAGGATGCATATAATA+TGG | - | chr8.3:1744766-1744785 | MS.gene055477:intron | 25.0% |
| ! | CCAAATAAAACTATGTAGTT+GGG | + | chr8.3:1745220-1745239 | None:intergenic | 25.0% |
| ! | CTAATTCAAATTGACGAAAT+GGG | + | chr8.3:1743623-1743642 | None:intergenic | 25.0% |
| ! | CTAGAATATAAAATGCTATC+TGG | - | chr8.3:1743756-1743775 | MS.gene055477:intron | 25.0% |
| ! | CTAGATATATGTAAAACACA+AGG | + | chr8.3:1742543-1742562 | None:intergenic | 25.0% |
| ! | GAAAAGGATTAAAGAGAAAA+TGG | + | chr8.3:1741199-1741218 | None:intergenic | 25.0% |
| ! | TAATATGGGTGAAGTAATAA+GGG | - | chr8.3:1744781-1744800 | MS.gene055477:intron | 25.0% |
| ! | TCCAAATAAAACTATGTAGT+TGG | + | chr8.3:1745221-1745240 | None:intergenic | 25.0% |
| ! | TCCTATTCATCAAAAATCAA+GGG | + | chr8.3:1741881-1741900 | None:intergenic | 25.0% |
| ! | TCCTTATAACAAACTAATTC+AGG | + | chr8.3:1742707-1742726 | None:intergenic | 25.0% |
| ! | TGATATCACTTTACTTTCAA+AGG | - | chr8.3:1744014-1744033 | MS.gene055477:intron | 25.0% |
| ! | TTAGAGGATGCATATAATAT+GGG | - | chr8.3:1744767-1744786 | MS.gene055477:intron | 25.0% |
| ! | TTCCTATTCATCAAAAATCA+AGG | + | chr8.3:1741882-1741901 | None:intergenic | 25.0% |
| ! | TTGTATGATTGTGCAATAAT+TGG | - | chr8.3:1741655-1741674 | MS.gene055477:intron | 25.0% |
| !! | CAGATAGCATTTTATATTCT+AGG | + | chr8.3:1743758-1743777 | None:intergenic | 25.0% |
| !! | CTTTTGATCAAAATAGTAGA+AGG | - | chr8.3:1744316-1744335 | MS.gene055477:intron | 25.0% |
| !! | GATCAAAAGCAAGATAATTT+TGG | + | chr8.3:1744305-1744324 | None:intergenic | 25.0% |
| !! | TAGATATTTTCAAAACCACT+AGG | + | chr8.3:1744088-1744107 | None:intergenic | 25.0% |
| !! | TTGTAGTTAGTTGATATTGT+TGG | - | chr8.3:1744718-1744737 | MS.gene055477:intron | 25.0% |
| !! | TTTTCTGACTGAATATAATG+TGG | - | chr8.3:1742773-1742792 | MS.gene055477:intron | 25.0% |
| !!! | AAAAAGGTTTTAATGTCACT+GGG | + | chr8.3:1742829-1742848 | None:intergenic | 25.0% |
| !!! | AAACTTGTTACAAAGTCAAT+AGG | + | chr8.3:1743920-1743939 | None:intergenic | 25.0% |
| !!! | ATATTTTGAGATTCTGGTAA+TGG | - | chr8.3:1742338-1742357 | MS.gene055477:intron | 25.0% |
| !!! | ATTTTAAAAAATGAAGGTCC+GGG | + | chr8.3:1744434-1744453 | None:intergenic | 25.0% |
| !!! | CGGCAAATTTTAAAAAATGA+AGG | + | chr8.3:1744440-1744459 | None:intergenic | 25.0% |
| !!! | GTTTAAATAGCTTATTTTGG+GGG | + | chr8.3:1742970-1742989 | None:intergenic | 25.0% |
| !!! | TCCTGAATTAGTTTGTTATA+AGG | - | chr8.3:1742703-1742722 | MS.gene055477:intron | 25.0% |
| !!! | TTTAATAGATGAAAGTACCT+CGG | + | chr8.3:1743237-1743256 | None:intergenic | 25.0% |
| AAATACAAGTGATGCAATTG+TGG | + | chr8.3:1742174-1742193 | None:intergenic | 30.0% | |
| AACAGTATTTCACATTGCAA+AGG | + | chr8.3:1742259-1742278 | None:intergenic | 30.0% | |
| AACGCCTGAAAGAATATAAA+AGG | + | chr8.3:1741977-1741996 | None:intergenic | 30.0% | |
| AAGTATAAATAGGTACGGTT+CGG | + | chr8.3:1744229-1744248 | None:intergenic | 30.0% | |
| AATATGGACATTGCTCTTAA+TGG | - | chr8.3:1742609-1742628 | MS.gene055477:intron | 30.0% | |
| AATATGGGTGAAGTAATAAG+GGG | - | chr8.3:1744782-1744801 | MS.gene055477:CDS | 30.0% | |
| AATGAAGAGGCTAATTGAAA+AGG | + | chr8.3:1741215-1741234 | None:intergenic | 30.0% | |
| AATTACTAAGGCTATGAAGA+TGG | - | chr8.3:1741470-1741489 | MS.gene055477:intron | 30.0% | |
| ACATACTTTGTCTCTTTATC+AGG | + | chr8.3:1742396-1742415 | None:intergenic | 30.0% | |
| ACTGACCATTTAATTATGAG+AGG | - | chr8.3:1744986-1745005 | MS.gene055477:intron | 30.0% | |
| ACTTGACAATATTTCATGTC+AGG | + | chr8.3:1743304-1743323 | None:intergenic | 30.0% | |
| AGAGACAAAGTATGTCATAT+TGG | - | chr8.3:1742401-1742420 | MS.gene055477:intron | 30.0% | |
| AGTATACAACAAAGTTTGTC+AGG | + | chr8.3:1743589-1743608 | None:intergenic | 30.0% | |
| AGTTACTGATGCAATTATAC+AGG | + | chr8.3:1745681-1745700 | None:intergenic | 30.0% | |
| ATATTCAACAACAAAAAGGC+AGG | + | chr8.3:1742869-1742888 | None:intergenic | 30.0% | |
| ATTCAAAATATGACACTGCA+AGG | - | chr8.3:1743675-1743694 | MS.gene055477:CDS | 30.0% | |
| CTAAACAATGGGTATATACT+CGG | + | chr8.3:1743075-1743094 | None:intergenic | 30.0% | |
| CTCAATAAAAAAGCAGCAAA+AGG | + | chr8.3:1745371-1745390 | None:intergenic | 30.0% | |
| CTGACCATTTAATTATGAGA+GGG | - | chr8.3:1744987-1745006 | MS.gene055477:intron | 30.0% | |
| CTTGACAATATTTCATGTCA+GGG | + | chr8.3:1743303-1743322 | None:intergenic | 30.0% | |
| CTTGTTAACACAAAAGAATC+AGG | + | chr8.3:1745291-1745310 | None:intergenic | 30.0% | |
| GAAAATATGAACAACACTTG+AGG | + | chr8.3:1744852-1744871 | None:intergenic | 30.0% | |
| GAATTGATTGAGATTATCTC+TGG | - | chr8.3:1745784-1745803 | MS.gene055477:CDS | 30.0% | |
| GAGACAAAGTATGTCATATT+GGG | - | chr8.3:1742402-1742421 | MS.gene055477:intron | 30.0% | |
| GAGTATATATGAACTCTGAA+TGG | + | chr8.3:1744620-1744639 | None:intergenic | 30.0% | |
| GATAATCTCAATCAATTCAG+TGG | + | chr8.3:1745782-1745801 | None:intergenic | 30.0% | |
| GATGATTATGATTTCATGGA+TGG | - | chr8.3:1743957-1743976 | MS.gene055477:intron | 30.0% | |
| GCAATAGAAATGAAATGAAG+AGG | + | chr8.3:1741228-1741247 | None:intergenic | 30.0% | |
| GGGAAAAACTTCATTACAAT+AGG | + | chr8.3:1743275-1743294 | None:intergenic | 30.0% | |
| GTTAGATAACTAGTTAGAGA+CGG | - | chr8.3:1744740-1744759 | MS.gene055477:intron | 30.0% | |
| TAGAGGAAAGTGAGAAAATT+TGG | + | chr8.3:1743832-1743851 | None:intergenic | 30.0% | |
| TATATACAACATTCGGTATC+TGG | - | chr8.3:1744671-1744690 | MS.gene055477:intron | 30.0% | |
| TATATAGGTCATGTTCAATG+CGG | - | chr8.3:1745475-1745494 | MS.gene055477:intron | 30.0% | |
| TTAGATAACTAGTTAGAGAC+GGG | - | chr8.3:1744741-1744760 | MS.gene055477:intron | 30.0% | |
| TTGAAATTGCAGACAATTGT+GGG | + | chr8.3:1742198-1742217 | None:intergenic | 30.0% | |
| TTGACAATATTTCATGTCAG+GGG | + | chr8.3:1743302-1743321 | None:intergenic | 30.0% | |
| ! | ACCCTTGATTTTTGATGAAT+AGG | - | chr8.3:1741877-1741896 | MS.gene055477:intron | 30.0% |
| ! | ATTGTAATGAAGTTTTTCCC+AGG | - | chr8.3:1743275-1743294 | MS.gene055477:intron | 30.0% |
| ! | GGTTCCTTTTATATTCTTTC+AGG | - | chr8.3:1741970-1741989 | MS.gene055477:intron | 30.0% |
| !! | AATGAAAGTACCAATTTGAG+TGG | + | chr8.3:1741288-1741307 | None:intergenic | 30.0% |
| !! | CAAAAAGGTTTTAATGTCAC+TGG | + | chr8.3:1742830-1742849 | None:intergenic | 30.0% |
| !! | TTAATAGATGAAAGTACCTC+GGG | + | chr8.3:1743236-1743255 | None:intergenic | 30.0% |
| !!! | AAAGGTTCTAAATTTTGTCG+GGG | + | chr8.3:1742241-1742260 | None:intergenic | 30.0% |
| !!! | CAAAGGTTCTAAATTTTGTC+GGG | + | chr8.3:1742242-1742261 | None:intergenic | 30.0% |
| !!! | CCCAACTACATAGTTTTATT+TGG | - | chr8.3:1745217-1745236 | MS.gene055477:intron | 30.0% |
| !!! | GCAAAGGTTCTAAATTTTGT+CGG | + | chr8.3:1742243-1742262 | None:intergenic | 30.0% |
| !!! | GCTGAAATATTTTGAGATTC+TGG | - | chr8.3:1742332-1742351 | MS.gene055477:intron | 30.0% |
| AAAAGAATCAGGAACAAGGT+TGG | + | chr8.3:1745280-1745299 | None:intergenic | 35.0% | |
| AAAGAATCAGGAACAAGGTT+GGG | + | chr8.3:1745279-1745298 | None:intergenic | 35.0% | |
| AATATGAACGTCACTCTAAC+TGG | - | chr8.3:1742735-1742754 | MS.gene055477:intron | 35.0% | |
| ACACAAAAGAATCAGGAACA+AGG | + | chr8.3:1745284-1745303 | None:intergenic | 35.0% | |
| ACTGATGCAATTATACAGGA+TGG | + | chr8.3:1745677-1745696 | None:intergenic | 35.0% | |
| AGAGATCAATCTTCTATTGG+AGG | - | chr8.3:1741248-1741267 | MS.gene055477:intron | 35.0% | |
| ATGAATAGGAATTGTCCACA+CGG | - | chr8.3:1741891-1741910 | MS.gene055477:intron | 35.0% | |
| ATTACCGTTTCTTCAGACAA+AGG | - | chr8.3:1742018-1742037 | MS.gene055477:intron | 35.0% | |
| CAAGCCCTCTCATAATTAAA+TGG | + | chr8.3:1744994-1745013 | None:intergenic | 35.0% | |
| CACAATTGTCTGCAATTTCA+AGG | - | chr8.3:1742197-1742216 | MS.gene055477:intron | 35.0% | |
| CATCAAAAATCAAGGGTGAA+GGG | + | chr8.3:1741874-1741893 | None:intergenic | 35.0% | |
| CATGTAGATTGTTGAAAGAG+AGG | - | chr8.3:1743437-1743456 | MS.gene055477:intron | 35.0% | |
| CCTATAGTAGCAAATAGGTT+TGG | + | chr8.3:1742372-1742391 | None:intergenic | 35.0% | |
| CGTTCTATTTCCACTCAAAT+TGG | - | chr8.3:1741275-1741294 | MS.gene055477:intron | 35.0% | |
| CGTTGTACAATTTCTACCAA+CGG | - | chr8.3:1743193-1743212 | MS.gene055477:intron | 35.0% | |
| CTAACCTGAGTATAATTCAG+AGG | + | chr8.3:1742504-1742523 | None:intergenic | 35.0% | |
| CTCACATATAAGCTGTAAAG+TGG | - | chr8.3:1744637-1744656 | MS.gene055477:intron | 35.0% | |
| CTTGAAATTGCAGACAATTG+TGG | + | chr8.3:1742199-1742218 | None:intergenic | 35.0% | |
| GAATCCTCTGAATTATACTC+AGG | - | chr8.3:1742497-1742516 | MS.gene055477:intron | 35.0% | |
| GAATGTGTGTCTAGTATTGT+TGG | + | chr8.3:1741826-1741845 | None:intergenic | 35.0% | |
| GACTGAAAACAAAGACTGAA+TGG | - | chr8.3:1741679-1741698 | MS.gene055477:intron | 35.0% | |
| GGAATTATTTCCAAATAGCC+AGG | + | chr8.3:1743867-1743886 | None:intergenic | 35.0% | |
| GGACATACCATAACATCAAA+AGG | - | chr8.3:1745238-1745257 | MS.gene055477:intron | 35.0% | |
| GTTACAAAGTCAATAGGAAG+CGG | + | chr8.3:1743914-1743933 | None:intergenic | 35.0% | |
| TAAACACCTCTTATACTGCA+GGG | - | chr8.3:1745071-1745090 | MS.gene055477:intron | 35.0% | |
| TATGAACTCTGAATGGAATG+CGG | + | chr8.3:1744613-1744632 | None:intergenic | 35.0% | |
| TATTGTCAAGTTTCGACGTT+TGG | - | chr8.3:1743313-1743332 | MS.gene055477:intron | 35.0% | |
| TATTTCCAAATAGCCAGGTA+GGG | + | chr8.3:1743862-1743881 | None:intergenic | 35.0% | |
| TCATCAAAAATCAAGGGTGA+AGG | + | chr8.3:1741875-1741894 | None:intergenic | 35.0% | |
| TCTGACTGAATATAATGTGG+TGG | - | chr8.3:1742776-1742795 | MS.gene055477:intron | 35.0% | |
| TGCAGAGATCAATCTTCTAT+TGG | - | chr8.3:1741245-1741264 | MS.gene055477:intron | 35.0% | |
| TGGATTCGTATGAGATTGAA+GGG | - | chr8.3:1743487-1743506 | MS.gene055477:intron | 35.0% | |
| TTACATCACACCATTGAAAC+AGG | + | chr8.3:1743408-1743427 | None:intergenic | 35.0% | |
| TTATTTCCAAATAGCCAGGT+AGG | + | chr8.3:1743863-1743882 | None:intergenic | 35.0% | |
| TTGAGAACTTTGACGTTTGA+AGG | - | chr8.3:1745403-1745422 | MS.gene055477:CDS | 35.0% | |
| TTGATTGTAACCACACATGT+CGG | - | chr8.3:1741775-1741794 | MS.gene055477:intron | 35.0% | |
| TTGTTGTCTGTGTATTGTGA+TGG | - | chr8.3:1742120-1742139 | MS.gene055477:intron | 35.0% | |
| TTGTTTGTGCAGTGAGAAAT+CGG | - | chr8.3:1741421-1741440 | MS.gene055477:intron | 35.0% | |
| ! | AAAACTGTTCAGCTTTTGTG+AGG | - | chr8.3:1742891-1742910 | MS.gene055477:intron | 35.0% |
| ! | ACACATTCAATCAGAAGTGT+GGG | - | chr8.3:1741838-1741857 | MS.gene055477:intron | 35.0% |
| ! | AGACTAGTCAGTGAAATCAT+AGG | + | chr8.3:1745719-1745738 | None:intergenic | 35.0% |
| ! | ATGTTTTATACCAACGTACC+CGG | - | chr8.3:1744413-1744432 | MS.gene055477:CDS | 35.0% |
| ! | CCAAACCTATTTGCTACTAT+AGG | - | chr8.3:1742369-1742388 | MS.gene055477:intron | 35.0% |
| ! | CGTTGGTAGAAATTGTACAA+CGG | + | chr8.3:1743195-1743214 | None:intergenic | 35.0% |
| ! | CTTAGTTATTTCGTCGTAGT+TGG | - | chr8.3:1744246-1744265 | MS.gene055477:intron | 35.0% |
| ! | GCTTAATTTGATCCCTGTTA+TGG | + | chr8.3:1743796-1743815 | None:intergenic | 35.0% |
| ! | TATAAAATGCTATCTGGGAC+CGG | - | chr8.3:1743762-1743781 | MS.gene055477:intron | 35.0% |
| ! | TGATGACATTCTGAAAAACG+TGG | - | chr8.3:1743130-1743149 | MS.gene055477:intron | 35.0% |
| !! | AAACTGCTCTAGAATGTTCT+TGG | + | chr8.3:1743994-1744013 | None:intergenic | 35.0% |
| !! | TAATAGATGAAAGTACCTCG+GGG | + | chr8.3:1743235-1743254 | None:intergenic | 35.0% |
| !! | TGAGATTCTGGTAATGGTAA+TGG | - | chr8.3:1742344-1742363 | MS.gene055477:intron | 35.0% |
| !! | TTTTGTGTCATTGCTCATTG+TGG | - | chr8.3:1741949-1741968 | MS.gene055477:intron | 35.0% |
| !!! | CATGATTTGTTGTGACCTTT+TGG | - | chr8.3:1744125-1744144 | MS.gene055477:intron | 35.0% |
| !!! | GTATTTTCAGGTTTCTGTCT+TGG | - | chr8.3:1743106-1743125 | MS.gene055477:intron | 35.0% |
| AAATTTGCCGTATTACGCAC+CGG | - | chr8.3:1744450-1744469 | MS.gene055477:CDS | 40.0% | |
| AAGGCCTTTGTCTGAAGAAA+CGG | + | chr8.3:1742025-1742044 | None:intergenic | 40.0% | |
| AAGTGATGCAATTGTGGATG+TGG | + | chr8.3:1742168-1742187 | None:intergenic | 40.0% | |
| AGAGCTTCCTAGTAACCAAA+AGG | + | chr8.3:1744143-1744162 | None:intergenic | 40.0% | |
| AGAGTGAGAAAGAACGAACA+AGG | + | chr8.3:1741165-1741184 | None:intergenic | 40.0% | |
| AGTTAGAGACGGGAAATTAG+AGG | - | chr8.3:1744751-1744770 | MS.gene055477:intron | 40.0% | |
| ATTTCCAAATAGCCAGGTAG+GGG | + | chr8.3:1743861-1743880 | None:intergenic | 40.0% | |
| CACACATTCAATCAGAAGTG+TGG | - | chr8.3:1741837-1741856 | MS.gene055477:intron | 40.0% | |
| CAGGTCCTATAGTAGCAAAT+AGG | + | chr8.3:1742377-1742396 | None:intergenic | 40.0% | |
| CTAGCTATGATGCATAGGTA+CGG | + | chr8.3:1744503-1744522 | None:intergenic | 40.0% | |
| CTGAAAATTCACGTGGTTTG+TGG | - | chr8.3:1741529-1741548 | MS.gene055477:intron | 40.0% | |
| CTGGATTCGTATGAGATTGA+AGG | - | chr8.3:1743486-1743505 | MS.gene055477:intron | 40.0% | |
| CTTCTCTTGATGCTTTCTCT+CGG | + | chr8.3:1744552-1744571 | None:intergenic | 40.0% | |
| GAGTGAGAAAGAACGAACAA+GGG | + | chr8.3:1741164-1741183 | None:intergenic | 40.0% | |
| GATAGTATAGTTGACACCGT+TGG | + | chr8.3:1743212-1743231 | None:intergenic | 40.0% | |
| GATTCGTATGAGATTGAAGG+GGG | - | chr8.3:1743489-1743508 | MS.gene055477:intron | 40.0% | |
| GGATTCGTATGAGATTGAAG+GGG | - | chr8.3:1743488-1743507 | MS.gene055477:intron | 40.0% | |
| GTAAACACCTCTTATACTGC+AGG | - | chr8.3:1745070-1745089 | MS.gene055477:intron | 40.0% | |
| GTATGTCATATTGGGAGAGA+AGG | - | chr8.3:1742410-1742429 | MS.gene055477:intron | 40.0% | |
| GTCTGACCCTCACTTATAAT+AGG | - | chr8.3:1745582-1745601 | MS.gene055477:intron | 40.0% | |
| TACGCAAGAAAACTGGAACT+CGG | + | chr8.3:1743547-1743566 | None:intergenic | 40.0% | |
| TAGCTATGATGCATAGGTAC+GGG | + | chr8.3:1744502-1744521 | None:intergenic | 40.0% | |
| TATGCATCATAGCTAGGAAG+CGG | - | chr8.3:1744507-1744526 | MS.gene055477:intron | 40.0% | |
| TTAGTCTAATTGCCGTACGT+AGG | - | chr8.3:1743639-1743658 | MS.gene055477:intron | 40.0% | |
| TTCAAGGACATGTTACCTAG+TGG | - | chr8.3:1744070-1744089 | MS.gene055477:intron | 40.0% | |
| TTGGGGGAAAATGCTTTCTT+TGG | + | chr8.3:1742954-1742973 | None:intergenic | 40.0% | |
| TTGGTGCAGCAAAAACGTAA+GGG | - | chr8.3:1744265-1744284 | MS.gene055477:intron | 40.0% | |
| TTGTACGTACGCAAGAAAAC+TGG | + | chr8.3:1743554-1743573 | None:intergenic | 40.0% | |
| ! | ACCAGAATTCAACTTGCTCA+AGG | + | chr8.3:1742088-1742107 | None:intergenic | 40.0% |
| ! | ACTTTCTCTCAGAGCATTCA+AGG | - | chr8.3:1744054-1744073 | MS.gene055477:intron | 40.0% |
| ! | AGATGGGCCTTTTGATGTTA+TGG | + | chr8.3:1745248-1745267 | None:intergenic | 40.0% |
| ! | ATAAAATGCTATCTGGGACC+GGG | - | chr8.3:1743763-1743782 | MS.gene055477:intron | 40.0% |
| ! | ATGCTTTCTTTGGCAGCTTT+TGG | + | chr8.3:1742944-1742963 | None:intergenic | 40.0% |
| ! | CTATGTAGTTGGGAGTGTAA+TGG | + | chr8.3:1745210-1745229 | None:intergenic | 40.0% |
| ! | TGCTTTCTTTGGCAGCTTTT+GGG | + | chr8.3:1742943-1742962 | None:intergenic | 40.0% |
| !! | AATAGATGAAAGTACCTCGG+GGG | + | chr8.3:1743234-1743253 | None:intergenic | 40.0% |
| !! | AGGTTTTAATGTCACTGGGT+TGG | + | chr8.3:1742825-1742844 | None:intergenic | 40.0% |
| !! | GAGAGAAAGCATCAAGAGAA+GGG | - | chr8.3:1744551-1744570 | MS.gene055477:intron | 40.0% |
| !! | GGTTTTAATGTCACTGGGTT+GGG | + | chr8.3:1742824-1742843 | None:intergenic | 40.0% |
| !! | GTGCTTTTTGCCTGTTTCAA+TGG | - | chr8.3:1743395-1743414 | MS.gene055477:CDS | 40.0% |
| !! | GTTGTGACCTTTTGGTTACT+AGG | - | chr8.3:1744133-1744152 | MS.gene055477:intron | 40.0% |
| !! | TGATTCTGAAGTCCTACGTA+CGG | + | chr8.3:1743654-1743673 | None:intergenic | 40.0% |
| !!! | AGGGGTTTTGTTCTGTAGTT+TGG | - | chr8.3:1744800-1744819 | MS.gene055477:CDS | 40.0% |
| !!! | GGGGTTTTGTTCTGTAGTTT+GGG | - | chr8.3:1744801-1744820 | MS.gene055477:CDS | 40.0% |
| AAGCATGGGTACTCCAAACA+TGG | - | chr8.3:1744164-1744183 | MS.gene055477:intron | 45.0% | |
| ACAAATTAGTACGCACCGTG+TGG | + | chr8.3:1741909-1741928 | None:intergenic | 45.0% | |
| AGTGGTGTACTTGGACTCTT+GGG | + | chr8.3:1745180-1745199 | None:intergenic | 45.0% | |
| ATAGGAAGCGGAAAGTTGTG+TGG | + | chr8.3:1743902-1743921 | None:intergenic | 45.0% | |
| ATATTTCATGTCAGGGGACC+TGG | + | chr8.3:1743296-1743315 | None:intergenic | 45.0% | |
| ATGATGCATAGGTACGGGTA+CGG | + | chr8.3:1744497-1744516 | None:intergenic | 45.0% | |
| ATGTGGTGGTTGCTTAATGC+TGG | - | chr8.3:1742790-1742809 | MS.gene055477:intron | 45.0% | |
| CACGTCTGTCAAGATAAGCA+GGG | - | chr8.3:1742062-1742081 | MS.gene055477:intron | 45.0% | |
| CATATTGGGAGAGAAGGCTA+AGG | - | chr8.3:1742416-1742435 | MS.gene055477:intron | 45.0% | |
| CGTACCTATGCATCATAGCT+AGG | - | chr8.3:1744501-1744520 | MS.gene055477:intron | 45.0% | |
| CTTGACAGGTCACTACTTTG+TGG | + | chr8.3:1745120-1745139 | None:intergenic | 45.0% | |
| GCTTCCTAGCTATGATGCAT+AGG | + | chr8.3:1744508-1744527 | None:intergenic | 45.0% | |
| GTCAGTGCTTCATTGGTGAA+GGG | + | chr8.3:1741706-1741725 | None:intergenic | 45.0% | |
| GTTGGTGCAGCAAAAACGTA+AGG | - | chr8.3:1744264-1744283 | MS.gene055477:intron | 45.0% | |
| GTTGTGTGGAGGGATAGATA+TGG | + | chr8.3:1743888-1743907 | None:intergenic | 45.0% | |
| TATTTCATGTCAGGGGACCT+GGG | + | chr8.3:1743295-1743314 | None:intergenic | 45.0% | |
| TCACAACCCTGCAGTATAAG+AGG | + | chr8.3:1745080-1745099 | None:intergenic | 45.0% | |
| TCTTCAGACAAAGGCCTTTG+TGG | - | chr8.3:1742027-1742046 | MS.gene055477:intron | 45.0% | |
| TGGTTGCTTAATGCTGGCAA+GGG | - | chr8.3:1742796-1742815 | MS.gene055477:intron | 45.0% | |
| TGTCAGTGCTTCATTGGTGA+AGG | + | chr8.3:1741707-1741726 | None:intergenic | 45.0% | |
| TGTGTGTGTCAGTGCTTCAT+TGG | + | chr8.3:1741713-1741732 | None:intergenic | 45.0% | |
| ! | AACTACGTGCTGTTCAAACC+AGG | - | chr8.3:1741505-1741524 | MS.gene055477:intron | 45.0% |
| ! | ACTACGTGCTGTTCAAACCA+GGG | - | chr8.3:1741506-1741525 | MS.gene055477:intron | 45.0% |
| ! | CTCCAAACATGGAGAAGTAC+CGG | - | chr8.3:1744175-1744194 | MS.gene055477:intron | 45.0% |
| ! | GCCTTGAGCAAGTTGAATTC+TGG | - | chr8.3:1742084-1742103 | MS.gene055477:intron | 45.0% |
| ! | TAAAATGCTATCTGGGACCG+GGG | - | chr8.3:1743764-1743783 | MS.gene055477:intron | 45.0% |
| ! | TGGAGTTGATTCCACCACAA+AGG | + | chr8.3:1742044-1742063 | None:intergenic | 45.0% |
| ! | TGGTTTGTGGCAGCCATTTA+CGG | - | chr8.3:1741542-1741561 | MS.gene055477:intron | 45.0% |
| ! | TGTAGTTGGGAGTGTAATGG+AGG | + | chr8.3:1745207-1745226 | None:intergenic | 45.0% |
| ! | TTGAGGCATTTGAGAGACCT+GGG | + | chr8.3:1744835-1744854 | None:intergenic | 45.0% |
| !! | ACTAGGAAGCTCTGAAGCAT+GGG | - | chr8.3:1744150-1744169 | MS.gene055477:intron | 45.0% |
| !! | AGTGGTGTTGATTGGTGGTT+GGG | + | chr8.3:1741120-1741139 | None:intergenic | 45.0% |
| !! | CGAGAGAAAGCATCAAGAGA+AGG | - | chr8.3:1744550-1744569 | MS.gene055477:intron | 45.0% |
| !! | TACTAGGAAGCTCTGAAGCA+TGG | - | chr8.3:1744149-1744168 | MS.gene055477:intron | 45.0% |
| !! | TCCAAACATGGAGAAGTACC+GGG | - | chr8.3:1744176-1744195 | MS.gene055477:intron | 45.0% |
| !!! | TTGTTTATATAAATTTTATA+AGG | - | chr8.3:1744958-1744977 | MS.gene055477:intron | 5.0% |
| AAATGAAGGTCCGGGTACGT+TGG | + | chr8.3:1744426-1744445 | None:intergenic | 50.0% | |
| AAGGTTGGGCGTAGACAAGA+TGG | + | chr8.3:1745265-1745284 | None:intergenic | 50.0% | |
| ACCAGGGCTGAAAATTCACG+TGG | - | chr8.3:1741522-1741541 | MS.gene055477:intron | 50.0% | |
| ACCCGGTACTTCTCCATGTT+TGG | + | chr8.3:1744180-1744199 | None:intergenic | 50.0% | |
| ACCGGGGTGAAATCCATAAC+AGG | - | chr8.3:1743780-1743799 | MS.gene055477:intron | 50.0% | |
| ACGAACAAGGGAGAGATGAG+AGG | + | chr8.3:1741152-1741171 | None:intergenic | 50.0% | |
| ACGTGGAGTATGATGCACTG+AGG | - | chr8.3:1743147-1743166 | MS.gene055477:intron | 50.0% | |
| AGGGAGAGATGAGAGGAGAT+CGG | + | chr8.3:1741145-1741164 | None:intergenic | 50.0% | |
| AGGTTGGGCGTAGACAAGAT+GGG | + | chr8.3:1745264-1745283 | None:intergenic | 50.0% | |
| ATTCCTGCTAGAGCTGTCCA+TGG | + | chr8.3:1745543-1745562 | None:intergenic | 50.0% | |
| CAGCCATTTACGGCTCTTCT+CGG | - | chr8.3:1741552-1741571 | MS.gene055477:intron | 50.0% | |
| CAGTGGTGTACTTGGACTCT+TGG | + | chr8.3:1745181-1745200 | None:intergenic | 50.0% | |
| CATTTGAGAGACCTGGGATC+TGG | + | chr8.3:1744829-1744848 | None:intergenic | 50.0% | |
| CCACGTCTGTCAAGATAAGC+AGG | - | chr8.3:1742061-1742080 | MS.gene055477:intron | 50.0% | |
| CCCTGTTATGGATTTCACCC+CGG | + | chr8.3:1743784-1743803 | None:intergenic | 50.0% | |
| CCGGGGTGAAATCCATAACA+GGG | - | chr8.3:1743781-1743800 | MS.gene055477:intron | 50.0% | |
| CCTGCTTATCTTGACAGACG+TGG | + | chr8.3:1742064-1742083 | None:intergenic | 50.0% | |
| CTAGGAAGCGGTCAAAGCAT+AGG | - | chr8.3:1744519-1744538 | MS.gene055477:intron | 50.0% | |
| GAAGCGGAAAGTTGTGTGGA+GGG | + | chr8.3:1743898-1743917 | None:intergenic | 50.0% | |
| GAAGCGGTCAAAGCATAGGA+AGG | - | chr8.3:1744523-1744542 | MS.gene055477:intron | 50.0% | |
| GGTCATGTTCAATGCGGTGT+TGG | - | chr8.3:1745481-1745500 | MS.gene055477:intron | 50.0% | |
| GTATCGAACACTGACGAGTG+AGG | - | chr8.3:1741797-1741816 | MS.gene055477:intron | 50.0% | |
| GTCAACTATACTATCCCCCG+AGG | - | chr8.3:1743217-1743236 | MS.gene055477:intron | 50.0% | |
| GTGGTGTACTTGGACTCTTG+GGG | + | chr8.3:1745179-1745198 | None:intergenic | 50.0% | |
| GTGGTTGCTTAATGCTGGCA+AGG | - | chr8.3:1742795-1742814 | MS.gene055477:intron | 50.0% | |
| GTGTTCGATACCGACATGTG+TGG | + | chr8.3:1741788-1741807 | None:intergenic | 50.0% | |
| GTTGAAAGAGAGGCTGAAGC+TGG | - | chr8.3:1743447-1743466 | MS.gene055477:intron | 50.0% | |
| TCACCGAGAAGAGCCGTAAA+TGG | + | chr8.3:1741558-1741577 | None:intergenic | 50.0% | |
| TCAGACAAAGGCCTTTGTGG+TGG | - | chr8.3:1742030-1742049 | MS.gene055477:intron | 50.0% | |
| TGTACTTGGACTCTTGGGGA+AGG | + | chr8.3:1745175-1745194 | None:intergenic | 50.0% | |
| ! | ACAGCTCTAGCAGGAATGCT+GGG | - | chr8.3:1745546-1745565 | MS.gene055477:intron | 50.0% |
| ! | ACCACGTGAATTTTCAGCCC+TGG | + | chr8.3:1741526-1741545 | None:intergenic | 50.0% |
| ! | AGTTGGGAGTGTAATGGAGG+AGG | + | chr8.3:1745204-1745223 | None:intergenic | 50.0% |
| ! | CTTGAGGCATTTGAGAGACC+TGG | + | chr8.3:1744836-1744855 | None:intergenic | 50.0% |
| !! | ATGGGTACCGGTGCGTAATA+CGG | + | chr8.3:1744460-1744479 | None:intergenic | 50.0% |
| !! | GAGTGGTGTTGATTGGTGGT+TGG | + | chr8.3:1741121-1741140 | None:intergenic | 50.0% |
| !! | GATCGGAGAGTGGTGTTGAT+TGG | + | chr8.3:1741128-1741147 | None:intergenic | 50.0% |
| AGGAGCAAGGATGTCTGCCA+TGG | - | chr8.3:1745523-1745542 | MS.gene055477:intron | 55.0% | |
| ATAGGTACGGGTACGGTACC+CGG | + | chr8.3:1744490-1744509 | None:intergenic | 55.0% | |
| CAAATAGCCAGGTAGGGGCT+AGG | + | chr8.3:1743856-1743875 | None:intergenic | 55.0% | |
| CTAAACGCTTCCCTTCGCGT+CGG | + | chr8.3:1741082-1741101 | None:intergenic | 55.0% | |
| CTAGCCCCTACCTGGCTATT+TGG | - | chr8.3:1743854-1743873 | MS.gene055477:intron | 55.0% | |
| CTTGGACTCTTGGGGAAGGA+CGG | + | chr8.3:1745171-1745190 | None:intergenic | 55.0% | |
| GAAAGAGAGGCTGAAGCTGG+AGG | - | chr8.3:1743450-1743469 | MS.gene055477:intron | 55.0% | |
| GAGAATGCCTGCAGTGAGCA+AGG | - | chr8.3:1745503-1745522 | MS.gene055477:intron | 55.0% | |
| GATGAGAGGAGATCGGAGAG+TGG | + | chr8.3:1741138-1741157 | None:intergenic | 55.0% | |
| GCTGAAGCTGGAGGAAGTCT+CGG | - | chr8.3:1743459-1743478 | MS.gene055477:intron | 55.0% | |
| GGAAGCGGAAAGTTGTGTGG+AGG | + | chr8.3:1743899-1743918 | None:intergenic | 55.0% | |
| GGTGGTTGGGAAGACATGAG+AGG | + | chr8.3:1741107-1741126 | None:intergenic | 55.0% | |
| TAGTTTGGGAGCCAGATCCC+AGG | - | chr8.3:1744815-1744834 | MS.gene055477:CDS | 55.0% | |
| TGGAGGAAGTCTCGGTGAAC+TGG | - | chr8.3:1743467-1743486 | MS.gene055477:intron | 55.0% | |
| TTGGACTCTTGGGGAAGGAC+GGG | + | chr8.3:1745170-1745189 | None:intergenic | 55.0% | |
| ! | CAGCTCTAGCAGGAATGCTG+GGG | - | chr8.3:1745547-1745566 | MS.gene055477:intron | 55.0% |
| ! | GACAGCTCTAGCAGGAATGC+TGG | - | chr8.3:1745545-1745564 | MS.gene055477:intron | 55.0% |
| ! | GAGTGTAATGGAGGAGGCAG+TGG | + | chr8.3:1745198-1745217 | None:intergenic | 55.0% |
| ! | TGGGGAAGGACGGGGTTTTT+GGG | + | chr8.3:1745161-1745180 | None:intergenic | 55.0% |
| ! | TTGGGGAAGGACGGGGTTTT+TGG | + | chr8.3:1745162-1745181 | None:intergenic | 55.0% |
| !! | AGAAGTACCGGGTACGCGTA+TGG | - | chr8.3:1744187-1744206 | MS.gene055477:intron | 55.0% |
| !! | CGGAGAGTGGTGTTGATTGG+TGG | + | chr8.3:1741125-1741144 | None:intergenic | 55.0% |
| !! | GAAGGACGGGGTTTTTGGGA+AGG | + | chr8.3:1745157-1745176 | None:intergenic | 55.0% |
| !! | TCTGGAGCATCAGCACTGAC+AGG | - | chr8.3:1745802-1745821 | MS.gene055477:CDS | 55.0% |
| ACCGGTACCCATACCCGTAC+CGG | - | chr8.3:1744468-1744487 | MS.gene055477:CDS | 60.0% | |
| ACGAGTGCCATACGCGTACC+CGG | + | chr8.3:1744197-1744216 | None:intergenic | 60.0% | |
| ACGGTACCCGGTACGGGTAT+GGG | + | chr8.3:1744478-1744497 | None:intergenic | 60.0% | |
| CCAGGTAGGGGCTAGGTTAG+AGG | + | chr8.3:1743849-1743868 | None:intergenic | 60.0% | |
| CCTCTAACCTAGCCCCTACC+TGG | - | chr8.3:1743846-1743865 | MS.gene055477:intron | 60.0% | |
| CCTGCAGTGAGCAAGGAGCA+AGG | - | chr8.3:1745510-1745529 | MS.gene055477:intron | 60.0% | |
| CCTTGCTCCTTGCTCACTGC+AGG | + | chr8.3:1745513-1745532 | None:intergenic | 60.0% | |
| GGAGGAGGCAGTGGTGTACT+TGG | + | chr8.3:1745189-1745208 | None:intergenic | 60.0% | |
| TACGGGTACGGTACCCGGTA+CGG | + | chr8.3:1744485-1744504 | None:intergenic | 60.0% | |
| TACGGTACCCGGTACGGGTA+TGG | + | chr8.3:1744479-1744498 | None:intergenic | 60.0% | |
| TGGACTCTTGGGGAAGGACG+GGG | + | chr8.3:1745169-1745188 | None:intergenic | 60.0% | |
| ! | CTGCCATGGACAGCTCTAGC+AGG | - | chr8.3:1745537-1745556 | MS.gene055477:intron | 60.0% |
| ACGGGTACGGTACCCGGTAC+GGG | + | chr8.3:1744484-1744503 | None:intergenic | 65.0% | |
| CCCGGTACGGGTATGGGTAC+CGG | + | chr8.3:1744472-1744491 | None:intergenic | 65.0% | |
| CCGGTACCCATACCCGTACC+GGG | - | chr8.3:1744469-1744488 | MS.gene055477:CDS | 65.0% | |
| CTGCTGCACTCCGACGCGAA+GGG | - | chr8.3:1741069-1741088 | MS.gene055477:CDS | 65.0% | |
| GCTGCTGCACTCCGACGCGA+AGG | - | chr8.3:1741068-1741087 | MS.gene055477:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 1741059 | 1745828 | 1741059 | ID=MS.gene055477 |
| chr8.3 | mRNA | 1741059 | 1745828 | 1741059 | ID=MS.gene055477.t1;Parent=MS.gene055477 |
| chr8.3 | exon | 1745776 | 1745828 | 1745776 | ID=MS.gene055477.t1.exon1;Parent=MS.gene055477.t1 |
| chr8.3 | CDS | 1745776 | 1745828 | 1745776 | ID=cds.MS.gene055477.t1;Parent=MS.gene055477.t1 |
| chr8.3 | exon | 1745591 | 1745637 | 1745591 | ID=MS.gene055477.t1.exon2;Parent=MS.gene055477.t1 |
| chr8.3 | CDS | 1745591 | 1745637 | 1745591 | ID=cds.MS.gene055477.t1;Parent=MS.gene055477.t1 |
| chr8.3 | exon | 1745302 | 1745454 | 1745302 | ID=MS.gene055477.t1.exon3;Parent=MS.gene055477.t1 |
| chr8.3 | CDS | 1745302 | 1745454 | 1745302 | ID=cds.MS.gene055477.t1;Parent=MS.gene055477.t1 |
| chr8.3 | exon | 1744782 | 1744895 | 1744782 | ID=MS.gene055477.t1.exon4;Parent=MS.gene055477.t1 |
| chr8.3 | CDS | 1744782 | 1744895 | 1744782 | ID=cds.MS.gene055477.t1;Parent=MS.gene055477.t1 |
| chr8.3 | exon | 1744369 | 1744496 | 1744369 | ID=MS.gene055477.t1.exon5;Parent=MS.gene055477.t1 |
| chr8.3 | CDS | 1744369 | 1744496 | 1744369 | ID=cds.MS.gene055477.t1;Parent=MS.gene055477.t1 |
| chr8.3 | exon | 1743649 | 1743771 | 1743649 | ID=MS.gene055477.t1.exon6;Parent=MS.gene055477.t1 |
| chr8.3 | CDS | 1743649 | 1743771 | 1743649 | ID=cds.MS.gene055477.t1;Parent=MS.gene055477.t1 |
| chr8.3 | exon | 1743324 | 1743443 | 1743324 | ID=MS.gene055477.t1.exon7;Parent=MS.gene055477.t1 |
| chr8.3 | CDS | 1743324 | 1743443 | 1743324 | ID=cds.MS.gene055477.t1;Parent=MS.gene055477.t1 |
| chr8.3 | exon | 1741284 | 1741405 | 1741284 | ID=MS.gene055477.t1.exon8;Parent=MS.gene055477.t1 |
| chr8.3 | CDS | 1741284 | 1741405 | 1741284 | ID=cds.MS.gene055477.t1;Parent=MS.gene055477.t1 |
| chr8.3 | exon | 1741059 | 1741128 | 1741059 | ID=MS.gene055477.t1.exon9;Parent=MS.gene055477.t1 |
| chr8.3 | CDS | 1741059 | 1741128 | 1741059 | ID=cds.MS.gene055477.t1;Parent=MS.gene055477.t1 |
| Gene Sequence |
| Protein sequence |
