AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene73458

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73458.t1 MTR_1g108770 99.284 559 4 0 1 559 1 559 0.0 1134
MS.gene73458.t1 MTR_1g108765 93.023 559 36 3 1 559 1 556 0.0 1009
MS.gene73458.t1 MTR_7g021780 69.703 472 136 3 85 550 17 487 0.0 629
MS.gene73458.t1 MTR_4g451275 69.474 475 138 3 85 553 17 490 0.0 629
MS.gene73458.t1 MTR_3g035730 68.842 475 141 3 85 553 17 490 0.0 622
MS.gene73458.t1 MTR_0002s0650 68.817 465 136 4 89 547 21 482 0.0 615
MS.gene73458.t1 MTR_7g033765 68.904 447 132 3 85 525 17 462 0.0 585
MS.gene73458.t1 MTR_7g033755 61.247 449 106 4 107 550 1 386 4.47e-178 512
MS.gene73458.t1 MTR_2g066870 60.152 394 143 5 162 552 29 411 3.69e-158 458
MS.gene73458.t1 MTR_1829s0010 76.577 222 52 0 319 540 1 222 3.64e-119 355
MS.gene73458.t1 MTR_7g117920 65.248 282 91 3 85 360 17 297 1.08e-108 328
MS.gene73458.t1 MTR_6g055020 63.774 265 89 3 85 343 17 280 2.87e-97 297
MS.gene73458.t1 MTR_2g066860 57.927 164 53 5 1 162 2 151 8.24e-47 162
MS.gene73458.t1 MTR_1g076100 70.000 80 24 0 376 455 5 84 6.12e-32 118
MS.gene73458.t1 MTR_4g010980 47.015 134 65 2 86 213 15 148 1.84e-28 111
MS.gene73458.t1 MTR_1g112870 28.642 405 251 12 118 496 52 444 1.06e-27 117
MS.gene73458.t1 MTR_7g081010 28.713 404 251 13 118 496 51 442 1.24e-27 116
MS.gene73458.t1 MTR_4g005410 28.313 332 212 9 183 496 203 526 4.44e-26 113
MS.gene73458.t1 MTR_5g090750 76.786 56 13 0 459 514 21 76 9.31e-23 92.4
MS.gene73458.t1 MTR_0002s0550 24.104 502 310 17 88 556 29 492 7.56e-19 90.1
MS.gene73458.t1 MTR_0212s0040 25.253 297 201 4 153 437 90 377 2.55e-18 89.4
MS.gene73458.t1 MTR_2g009560 45.833 72 36 1 480 551 3 71 9.66e-14 67.4
MS.gene73458.t1 MTR_3g099550 73.333 45 12 0 101 145 10 54 1.06e-13 67.8
MS.gene73458.t1 MTR_3g065340 59.259 54 21 1 88 141 55 107 2.75e-13 67.8
MS.gene73458.t1 MTR_7g498250 70.833 48 12 2 1 48 1 46 7.03e-11 60.5
MS.gene73458.t1 MTR_7g498250 70.833 48 12 2 1 48 1 46 9.14e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73458.t1 AT5G08680 84.351 524 75 2 38 559 41 559 0.0 902
MS.gene73458.t1 AT5G08690 84.121 529 77 2 33 559 33 556 0.0 891
MS.gene73458.t1 AT5G08670 84.181 531 76 3 32 559 31 556 0.0 890
MS.gene73458.t1 ATCG00480 68.267 479 145 3 85 557 17 494 0.0 631
MS.gene73458.t1 AT1G20260 28.642 405 251 12 118 496 50 442 2.16e-28 119
MS.gene73458.t1 AT1G76030 28.822 399 248 11 118 492 50 436 4.62e-28 118
MS.gene73458.t1 AT4G38510 28.218 404 253 12 118 496 58 449 1.01e-27 117
MS.gene73458.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.01e-27 117
MS.gene73458.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.01e-27 117
MS.gene73458.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.01e-27 117
MS.gene73458.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.01e-27 117
MS.gene73458.t1 AT1G78900 27.635 351 223 10 211 544 229 565 3.23e-26 113
MS.gene73458.t1 AT1G78900 27.635 351 223 10 211 544 229 565 3.23e-26 113
MS.gene73458.t1 ATMG01190 25.667 300 202 4 150 437 87 377 2.53e-19 91.7
MS.gene73458.t1 AT2G07698 25.589 297 200 4 153 437 360 647 1.07e-18 90.5
MS.gene73458.t1 ATCG00120 24.651 430 271 14 101 513 54 447 6.74e-17 84.3

Find 154 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGATATCATTGCTATTT+TGG 0.086458 1.4:-83417481 MS.gene73458:CDS
TATGCTTTCACCACTTATTT+TGG 0.102924 1.4:-83417565 MS.gene73458:CDS
AGCAAATGTGCTCTTGTTTA+TGG 0.159877 1.4:-83418226 MS.gene73458:CDS
CGTGCCCGTGTTGGTCTTAC+TGG 0.164716 1.4:-83418178 MS.gene73458:CDS
GGACGTATCATGAATGTTAT+TGG 0.260657 1.4:-83418986 MS.gene73458:CDS
ATCCAATCTTTCCTCCTCTT+TGG 0.273825 1.4:+83418616 None:intergenic
AGCTACCACCTTTGCTCACT+TGG 0.316716 1.4:-83417778 MS.gene73458:CDS
AAGATTACAGATGAATTTAC+TGG 0.354465 1.4:-83420138 MS.gene73458:CDS
TGATTGAGAAGAAGAGATTC+TGG 0.357390 1.4:+83420281 None:intergenic
GGAGGAAAGATTGGATTGTT+TGG 0.361136 1.4:-83418609 MS.gene73458:CDS
AGAGGTAATTGAACCCTTCT+TGG 0.378135 1.4:+83417848 None:intergenic
CCAACACGGGCACGAGCACC+AGG 0.380050 1.4:+83418187 None:intergenic
ATTGGATTGTTTGGTGGTGC+TGG 0.384032 1.4:-83418600 MS.gene73458:CDS
TGAGGTGGTGAGGGATGATT+TGG 0.386496 1.4:+83420308 None:intergenic
CTATCCTGCTGTTGATCCAT+TGG 0.388341 1.4:-83417601 MS.gene73458:CDS
ATCTTTCCTCCTCTTTGGTA+TGG 0.392214 1.4:+83418621 None:intergenic
CCAACATTGTCTACTGATCT+TGG 0.396356 1.4:-83417897 MS.gene73458:CDS
GAACAAGTATTTACACTGAT+AGG 0.402727 1.4:+83419892 None:intergenic
GTAGGAGCTTCTCTATGAAT+AGG 0.403993 1.4:+83418810 None:intergenic
CTCTTTGAAAGATGGCTTCA+CGG 0.408787 1.4:-83420377 None:intergenic
CCATTCAGGTTCCCGTTGGC+AGG 0.418779 1.4:-83419018 MS.gene73458:intron
CCCGTTGGCAGGTGTACTCT+TGG 0.425281 1.4:-83419007 MS.gene73458:CDS
TGCGATTGGACAGGTTTGTC+AGG 0.431621 1.4:-83420109 MS.gene73458:CDS
TACCAAAGAGGAGGAAAGAT+TGG 0.432147 1.4:-83418618 MS.gene73458:CDS
ACAGATGAATTTACTGGTAA+AGG 0.438215 1.4:-83420132 MS.gene73458:CDS
AGAGAATTGTACTAGTTTCA+AGG 0.440200 1.4:-83417328 MS.gene73458:intron
CTCCTCTTTGGTATGGTGCA+AGG 0.442168 1.4:+83418628 None:intergenic
GCCACGGAAGGAGTTGTTAG+AGG 0.442751 1.4:-83419940 MS.gene73458:CDS
GGACAGGTTTGTCAGGTGAT+TGG 0.443988 1.4:-83420102 MS.gene73458:CDS
GAAGTCTTCACTGGTGCCCC+TGG 0.444882 1.4:-83417369 MS.gene73458:CDS
TATACAAGTCGTTACCCTCT+CGG 0.450847 1.4:+83418378 None:intergenic
GGAGGAGTCTGAGGAGGAGC+GGG 0.453232 1.4:+83420189 None:intergenic
GTTGGAGGTTGCACAACATA+TGG 0.453780 1.4:-83419995 MS.gene73458:CDS
GGTCGCATTCCATCTGCTGT+TGG 0.461688 1.4:-83417927 MS.gene73458:CDS
AGCGGGAGCTGCAGCAGCCG+CGG 0.467946 1.4:+83420206 None:intergenic
TTGTTTGGTGGTGCTGGTGT+AGG 0.469965 1.4:-83418594 MS.gene73458:CDS
TTCTACCAGATTGGTGTTGG+AGG 0.474155 1.4:-83420010 MS.gene73458:CDS
AACAAGTATTTACACTGATA+GGG 0.474457 1.4:+83419893 None:intergenic
TTCAAGTCGACATATTTGCC+AGG 0.475504 1.4:+83417351 None:intergenic
GTTGCTTGTTCAACAAAAGT+AGG 0.475828 1.4:+83418792 None:intergenic
AAGTGAGCAAAGGTGGTAGC+TGG 0.477958 1.4:+83417780 None:intergenic
GGAGAACCTATCGATCATAA+AGG 0.484786 1.4:-83418965 MS.gene73458:CDS
TCAGAGGTGTCTGCCTTGCT+TGG 0.485682 1.4:-83417948 MS.gene73458:CDS
AATTCTTGTGACCGGTATCA+AGG 0.486500 1.4:-83418760 MS.gene73458:intron
TGCAACCTCCAACACCAATC+TGG 0.487446 1.4:+83420005 None:intergenic
TCTCGATCATTCTACCAGAT+TGG 0.487639 1.4:-83420019 MS.gene73458:CDS
CAGCAGGAACATAGATAGCT+TGG 0.488213 1.4:+83417823 None:intergenic
AGAAGAGATTCTGGATGTTG+AGG 0.489907 1.4:+83420290 None:intergenic
ATACAAGTCGTTACCCTCTC+GGG 0.496422 1.4:+83418379 None:intergenic
TGGTAAAGGTGCGATTGGAC+AGG 0.502211 1.4:-83420118 MS.gene73458:CDS
CATGTGGCAGAAGTCTTCAC+TGG 0.503014 1.4:-83417378 MS.gene73458:CDS
TTTACTGGTAAAGGTGCGAT+TGG 0.504437 1.4:-83420123 MS.gene73458:CDS
CGCTCCTCCTCAGACTCCTC+CGG 0.504794 1.4:-83420187 MS.gene73458:CDS
CATTAAGCTTGGTGATCAGC+AGG 0.509927 1.4:-83418333 MS.gene73458:intron
TATAGAGAAATGATTGAGAG+TGG 0.511529 1.4:-83418359 MS.gene73458:CDS
GCAAAGGTGGTAGCTGGAGC+AGG 0.511863 1.4:+83417786 None:intergenic
TCATTCTACCAGATTGGTGT+TGG 0.514550 1.4:-83420013 MS.gene73458:CDS
TTCTGGATGTTGAGGTGGTG+AGG 0.515925 1.4:+83420298 None:intergenic
CCAAGAGTACACCTGCCAAC+GGG 0.515968 1.4:+83419007 None:intergenic
CCTGGTGCTCGTGCCCGTGT+TGG 0.516375 1.4:-83418187 MS.gene73458:CDS
TGTAAAATGCTTGTTCTGAA+AGG 0.518148 1.4:+83416824 None:intergenic
GAAGACTTCTGCCACATGGA+AGG 0.519142 1.4:+83417383 None:intergenic
GGTAATTGAACCCTTCTTGG+TGG 0.519165 1.4:+83417851 None:intergenic
TGAACTAATGCAGGGTGTGT+TGG 0.523112 1.4:-83416863 MS.gene73458:intron
GTAATCTTTCCACCACCGTC+AGG 0.524642 1.4:+83420153 None:intergenic
TGCTCATCACCCAAAATAAG+TGG 0.527620 1.4:+83417555 None:intergenic
GGTCACAAGAATTTGTTGTT+CGG 0.528371 1.4:+83418770 None:intergenic
CCGTCAGGAACTTTCTTAGC+CGG 0.528890 1.4:+83420168 None:intergenic
GAGAGTGGAGTCATTAAGCT+TGG 0.530056 1.4:-83418344 MS.gene73458:CDS
AACAATGTCGCAAAGGCTCA+TGG 0.531884 1.4:-83418543 MS.gene73458:intron
AACTATTGCTATGGATGCCA+CGG 0.532047 1.4:-83419956 MS.gene73458:CDS
TCCTATTCTTACTGCGCTCG+AGG 0.535476 1.4:-83420043 MS.gene73458:CDS
TCAGGTGATTGGTGCTGTGG+TGG 0.537904 1.4:-83420091 MS.gene73458:CDS
GGATCTGTCAAGTCATCAGC+AGG 0.539160 1.4:+83417807 None:intergenic
TCTGGATGTTGAGGTGGTGA+GGG 0.539855 1.4:+83420299 None:intergenic
ACCTCGAGCGCAGTAAGAAT+AGG 0.541908 1.4:+83420042 None:intergenic
AATTCGCCTTTATGATCGAT+AGG 0.542417 1.4:+83418959 None:intergenic
GAATCCAATGGATCAACAGC+AGG 0.543347 1.4:+83417597 None:intergenic
AAGACTTCTGCCACATGGAA+GGG 0.546375 1.4:+83417384 None:intergenic
GCGTATTACAACCACCAAGA+AGG 0.546572 1.4:-83417862 MS.gene73458:CDS
AGGGATGATTTGGATAGAGA+TGG 0.547033 1.4:+83420318 None:intergenic
TTCTTAGCCGGAGGAGTCTG+AGG 0.548263 1.4:+83420180 None:intergenic
AACACGGGCACGAGCACCAG+GGG 0.551252 1.4:+83418189 None:intergenic
AGCCGCGGCTGTAGCATACT+CGG 0.552420 1.4:+83420221 None:intergenic
AAGAAAGTTCCTGACGGTGG+TGG 0.552444 1.4:-83420162 MS.gene73458:CDS
CAAATACAATACCTTGATAC+CGG 0.554796 1.4:+83418749 None:intergenic
ACTCGGTAACACGGTTAAGA+AGG 0.555449 1.4:+83420238 None:intergenic
CGGAGGAGTCTGAGGAGGAG+CGG 0.557119 1.4:+83420188 None:intergenic
CAAGGCAGACACCTCTGAGT+TGG 0.558674 1.4:+83417953 None:intergenic
TACAACAGTGTTGTCAAGAC+AGG 0.559306 1.4:-83417751 MS.gene73458:intron
AGATGGAATGCGACCAAGCA+AGG 0.564270 1.4:+83417935 None:intergenic
GGTTGATAACCAACAGCAGA+TGG 0.565470 1.4:+83417918 None:intergenic
ACGGTTAAGAAGGTAAGCAT+AGG 0.566888 1.4:+83420248 None:intergenic
CCCTCTAACAACTCCTTCCG+TGG 0.568223 1.4:+83419939 None:intergenic
AACATAGATAGCTTGGACAG+AGG 0.572715 1.4:+83417830 None:intergenic
ATTTACACTGATAGGGGAGC+CGG 0.574020 1.4:+83419900 None:intergenic
CAACACGGGCACGAGCACCA+GGG 0.575730 1.4:+83418188 None:intergenic
CGTATTACAACCACCAAGAA+GGG 0.576665 1.4:-83417861 MS.gene73458:CDS
TTGTCAGGTGATTGGTGCTG+TGG 0.581396 1.4:-83420094 MS.gene73458:CDS
GGAAAGATTGGATTGTTTGG+TGG 0.584577 1.4:-83418606 MS.gene73458:CDS
TGAACATAGATCTCTGAGCT+TGG 0.584953 1.4:-83417627 MS.gene73458:intron
TCAAGTCGACATATTTGCCA+GGG 0.585073 1.4:+83417352 None:intergenic
ATACGAGATGTTGAATCCAA+TGG 0.586954 1.4:+83417585 None:intergenic
CAGTGAAGACTTCTGCCACA+TGG 0.590023 1.4:+83417379 None:intergenic
CGGTTAAGAAGGTAAGCATA+GGG 0.593834 1.4:+83420249 None:intergenic
TTGGAGGTTGCACAACATAT+GGG 0.594665 1.4:-83419994 MS.gene73458:CDS
ATTTGCATACTTGAGTAAAG+CGG 0.595796 1.4:+83418086 None:intergenic
TTTGGATAGAGATGGACGGA+GGG 0.596872 1.4:+83420326 None:intergenic
AGCATCCAAGTGAGCAAAGG+TGG 0.598239 1.4:+83417773 None:intergenic
TGTTGTGAGAACTATTGCTA+TGG 0.599192 1.4:-83419965 MS.gene73458:CDS
ATTTGGATAGAGATGGACGG+AGG 0.599909 1.4:+83420325 None:intergenic
TCGGGTTCGTTCTCCAACAC+CGG 0.602823 1.4:+83418397 None:intergenic
ACTTATTAACAATGTCGCAA+AGG 0.603139 1.4:-83418550 MS.gene73458:CDS
AATTCCATTCAGGTTCCCGT+TGG 0.605383 1.4:-83419022 MS.gene73458:intron
CCACGGAAGGAGTTGTTAGA+GGG 0.608178 1.4:-83419939 MS.gene73458:CDS
TCGAGCGCAGTAAGAATAGG+AGG 0.610963 1.4:+83420045 None:intergenic
TCAGGAACTTTCTTAGCCGG+AGG 0.611341 1.4:+83420171 None:intergenic
GAACAACAAATTCTTGTGAC+CGG 0.612009 1.4:-83418768 MS.gene73458:CDS
TCCAAGAGTACACCTGCCAA+CGG 0.615971 1.4:+83419006 None:intergenic
CCAAGATCAGTAGACAATGT+TGG 0.620434 1.4:+83417897 None:intergenic
ACAAGTATTTACACTGATAG+GGG 0.621699 1.4:+83419894 None:intergenic
CATCTTGTCCTTCAGCATCA+CGG 0.623861 1.4:+83418134 None:intergenic
CGGAAGGAGTTGTTAGAGGG+TGG 0.625071 1.4:-83419936 MS.gene73458:CDS
ACATTGTCTACTGATCTTGG+AGG 0.626628 1.4:-83417894 MS.gene73458:CDS
GTGGATGTGAGATTCGAAGA+AGG 0.629837 1.4:-83420072 MS.gene73458:CDS
CTAATGCAGGGTGTGTTGGA+TGG 0.633559 1.4:-83416859 MS.gene73458:intron
AGAGATTCTGGATGTTGAGG+TGG 0.635525 1.4:+83420293 None:intergenic
ATTGCTATGGATGCCACGGA+AGG 0.637249 1.4:-83419952 MS.gene73458:CDS
CAAGTCGACATATTTGCCAG+GGG 0.638676 1.4:+83417353 None:intergenic
GTTGCACAACATATGGGTGA+AGG 0.642855 1.4:-83419988 MS.gene73458:CDS
CTCCTTGCACCATACCAAAG+AGG 0.642909 1.4:-83418630 MS.gene73458:CDS
GAACATTTCCGTGATGCTGA+AGG 0.644056 1.4:-83418142 MS.gene73458:CDS
TGTAGCATCCAAGTGAGCAA+AGG 0.644891 1.4:+83417770 None:intergenic
GGGTGGCGTGTTCTCAACAC+CGG 0.644892 1.4:-83419919 MS.gene73458:CDS
TTAGCCGGAGGAGTCTGAGG+AGG 0.645635 1.4:+83420183 None:intergenic
GGATAGAGATGGACGGAGGG+AGG 0.645699 1.4:+83420329 None:intergenic
AAAGGCAGAGAAGATTGCTA+AGG 0.647562 1.4:-83416773 MS.gene73458:CDS
TAATCCAGTAAGACCAACAC+GGG 0.647834 1.4:+83418174 None:intergenic
GTTGGAGAACGAACCCGAGA+GGG 0.654723 1.4:-83418392 MS.gene73458:CDS
ATGATTTGGATAGAGATGGA+CGG 0.656779 1.4:+83420322 None:intergenic
TACTTGTTGTACACCTCGAG+CGG 0.660570 1.4:+83417524 None:intergenic
CTGTAGCATACTCGGTAACA+CGG 0.661294 1.4:+83420229 None:intergenic
TATTGATGAAGTCATTGCAA+AGG 0.663663 1.4:-83416791 MS.gene73458:CDS
GAAGATTGCTAAGGAAAATG+CGG 0.670742 1.4:-83416764 MS.gene73458:CDS
CTTGCACCATACCAAAGAGG+AGG 0.675495 1.4:-83418627 MS.gene73458:CDS
CCGGCTAAGAAAGTTCCTGA+CGG 0.676215 1.4:-83420168 MS.gene73458:CDS
GAGCACTACGAAACCGCTCG+AGG 0.679828 1.4:-83417537 MS.gene73458:CDS
CTTAAGTCAGCCCTTCCATG+TGG 0.684956 1.4:-83417394 MS.gene73458:CDS
GCTAAGAAAGTTCCTGACGG+TGG 0.702490 1.4:-83420165 MS.gene73458:CDS
TGTTGGAGAACGAACCCGAG+AGG 0.706147 1.4:-83418393 MS.gene73458:CDS
TACCGAGTATGCTACAGCCG+CGG 0.717503 1.4:-83420223 MS.gene73458:CDS
TTAATCCAGTAAGACCAACA+CGG 0.720007 1.4:+83418173 None:intergenic
ACACGGGCACGAGCACCAGG+GGG 0.727891 1.4:+83418190 None:intergenic
GTAATTGTAGGCCAACTCAG+AGG 0.729723 1.4:-83417964 MS.gene73458:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAACTAAATAATTTGATT+TGG - chr1.4:83419467-83419486 MS.gene73458:intron 10.0%
!!! ATATTTTTTAACTAAAATAC+CGG + chr1.4:83420113-83420132 None:intergenic 10.0%
!! AAAACAAGAAACTTAATTAA+TGG + chr1.4:83417742-83417761 None:intergenic 15.0%
!! ATTATAACTCTCATATTAAA+AGG + chr1.4:83419118-83419137 None:intergenic 15.0%
!! ATTGATTAATTAAACTAAAG+TGG - chr1.4:83419415-83419434 MS.gene73458:intron 15.0%
!! TTTCTATTATGAAGAATATT+AGG - chr1.4:83417680-83417699 MS.gene73458:intron 15.0%
!!! GTTTAAATTAAGGTTTTTAT+AGG - chr1.4:83420083-83420102 MS.gene73458:CDS 15.0%
!!! TAATTAAGTTTCTTGTTTTA+TGG - chr1.4:83417743-83417762 MS.gene73458:intron 15.0%
!! GTAACAAATAAAACATACAA+TGG - chr1.4:83417436-83417455 MS.gene73458:CDS 20.0%
!! TGAAAAAAATCATGTAAGAT+TGG + chr1.4:83418461-83418480 None:intergenic 20.0%
!! TTTATCAAAGTTCTTAACTA+TGG - chr1.4:83418853-83418872 MS.gene73458:intron 20.0%
!!! AATGAAAAGTATAAACTATG+TGG + chr1.4:83418010-83418029 None:intergenic 20.0%
!!! ATGAAAAGTATAAACTATGT+GGG + chr1.4:83418009-83418028 None:intergenic 20.0%
!!! TTACATGATTTTTTTCATAC+AGG - chr1.4:83418464-83418483 MS.gene73458:intron 20.0%
! AAAAACATTGTTAGAGCAAA+TGG + chr1.4:83418222-83418241 None:intergenic 25.0%
! AACAAGTATTTACACTGATA+GGG + chr1.4:83417235-83417254 None:intergenic 25.0%
! AAGATTACAGATGAATTTAC+TGG - chr1.4:83416987-83417006 MS.gene73458:intron 25.0%
! AATACTCGAAGCTTATTATA+AGG - chr1.4:83420005-83420024 MS.gene73458:CDS 25.0%
! ATACTCGAAGCTTATTATAA+GGG - chr1.4:83420006-83420025 MS.gene73458:CDS 25.0%
! ATAGATAGTGATATTAGTGA+AGG + chr1.4:83419955-83419974 None:intergenic 25.0%
! ATTAGTTCATAGAGAAAATC+CGG + chr1.4:83420251-83420270 None:intergenic 25.0%
! GAAGTAATTTAATCAGTGAA+TGG + chr1.4:83417579-83417598 None:intergenic 25.0%
! TATTGAAAAGAAAATTCCCA+AGG + chr1.4:83419989-83420008 None:intergenic 25.0%
! TGTTTATATACACTTCTTTC+TGG - chr1.4:83420052-83420071 MS.gene73458:CDS 25.0%
!! ATGTTTTTCTATCAATTCCA+TGG - chr1.4:83418234-83418253 MS.gene73458:CDS 25.0%
!! ATTTCTTCAATCTAAGATGA+TGG + chr1.4:83417319-83417338 None:intergenic 25.0%
!! GGCAATTGTAATGATATTTT+TGG - chr1.4:83419436-83419455 MS.gene73458:intron 25.0%
!! TAAGGTTTTTATAGGAAAAC+CGG - chr1.4:83420091-83420110 MS.gene73458:CDS 25.0%
!! TGAAAAGTATAAACTATGTG+GGG + chr1.4:83418008-83418027 None:intergenic 25.0%
!! TTATTTGTTACAAACACGAA+AGG + chr1.4:83417427-83417446 None:intergenic 25.0%
!!! CAAGATATCATTGCTATTTT+GGG - chr1.4:83419645-83419664 MS.gene73458:intron 25.0%
!!! GGAAGTGTTTGTTTAAATTA+AGG - chr1.4:83420073-83420092 MS.gene73458:CDS 25.0%
!!! TCAAGATATCATTGCTATTT+TGG - chr1.4:83419644-83419663 MS.gene73458:intron 25.0%
AAAGAAAATTCCCAAGGAAT+AGG + chr1.4:83419983-83420002 None:intergenic 30.0%
ACAAGTATTTACACTGATAG+GGG + chr1.4:83417234-83417253 None:intergenic 30.0%
ACAGATGAATTTACTGGTAA+AGG - chr1.4:83416993-83417012 MS.gene73458:intron 30.0%
ACTTATTAACAATGTCGCAA+AGG - chr1.4:83418575-83418594 MS.gene73458:CDS 30.0%
AGAAACCACCTGATAATAAA+TGG + chr1.4:83418699-83418718 None:intergenic 30.0%
AGGAAAAACTGTGCTTATTA+TGG - chr1.4:83418551-83418570 MS.gene73458:CDS 30.0%
ATAATGCCTGATGTAATTGT+AGG - chr1.4:83419149-83419168 MS.gene73458:intron 30.0%
ATCTATATGAACCTATTCCT+TGG - chr1.4:83419969-83419988 MS.gene73458:CDS 30.0%
ATGAATAGGCAAAAAATGCT+CGG + chr1.4:83418304-83418323 None:intergenic 30.0%
ATTTGCATACTTGAGTAAAG+CGG + chr1.4:83419042-83419061 None:intergenic 30.0%
CAAATACAATACCTTGATAC+CGG + chr1.4:83418379-83418398 None:intergenic 30.0%
CTCAAGTATGCAAATTATCT+AGG - chr1.4:83419047-83419066 MS.gene73458:intron 30.0%
GAACAAGTATTTACACTGAT+AGG + chr1.4:83417236-83417255 None:intergenic 30.0%
GAGTGTTTCCATTTATTATC+AGG - chr1.4:83418688-83418707 MS.gene73458:intron 30.0%
TAAGTTCCTGTATGATCATA+AGG + chr1.4:83419855-83419874 None:intergenic 30.0%
TATAGAGAAATGATTGAGAG+TGG - chr1.4:83418766-83418785 MS.gene73458:CDS 30.0%
TATTGATGAAGTCATTGCAA+AGG - chr1.4:83420334-83420353 MS.gene73458:CDS 30.0%
TCTATATGAACCTATTCCTT+GGG - chr1.4:83419970-83419989 MS.gene73458:CDS 30.0%
TGATCATACAGGAACTTATT+TGG - chr1.4:83419857-83419876 MS.gene73458:intron 30.0%
TGTTTCCATTTATTATCAGG+TGG - chr1.4:83418691-83418710 MS.gene73458:intron 30.0%
TTTCTCTATGAACTAATGCA+GGG - chr1.4:83420254-83420273 MS.gene73458:CDS 30.0%
! AGAGAATTGTACTAGTTTCA+AGG - chr1.4:83419797-83419816 MS.gene73458:intron 30.0%
! ATGAGTTGAAAAACATTCCA+TGG + chr1.4:83418254-83418273 None:intergenic 30.0%
! GATGATGGTGATATATAGAT+TGG + chr1.4:83417304-83417323 None:intergenic 30.0%
! TATGCTTTCACCACTTATTT+TGG - chr1.4:83419560-83419579 MS.gene73458:intron 30.0%
! TGGACTGAAAAAAGATTTTG+AGG + chr1.4:83418202-83418221 None:intergenic 30.0%
! TGTAAAATGCTTGTTCTGAA+AGG + chr1.4:83420304-83420323 None:intergenic 30.0%
! TTCAGAACAAGCATTTTACA+TGG - chr1.4:83420304-83420323 MS.gene73458:CDS 30.0%
! TTTTCTCTATGAACTAATGC+AGG - chr1.4:83420253-83420272 MS.gene73458:CDS 30.0%
!! ATGCTTTCACCACTTATTTT+GGG - chr1.4:83419561-83419580 MS.gene73458:intron 30.0%
!!! TATCATTGCTATTTTGGGAA+TGG - chr1.4:83419650-83419669 MS.gene73458:intron 30.0%
AAATCCGGTCAAATTGTTTG+TGG + chr1.4:83420236-83420255 None:intergenic 35.0%
AAGCAACTTCCAAACAAATC+TGG + chr1.4:83419922-83419941 None:intergenic 35.0%
AATGCTTGTGAATTCCATTC+AGG - chr1.4:83418093-83418112 MS.gene73458:intron 35.0%
AATTCGCCTTTATGATCGAT+AGG + chr1.4:83418169-83418188 None:intergenic 35.0%
ATACGAGATGTTGAATCCAA+TGG + chr1.4:83419543-83419562 None:intergenic 35.0%
CAATCCACAAACAATTTGAC+CGG - chr1.4:83420229-83420248 MS.gene73458:CDS 35.0%
GAACAACAAATTCTTGTGAC+CGG - chr1.4:83418357-83418376 MS.gene73458:CDS 35.0%
GAAGATTGCTAAGGAAAATG+CGG - chr1.4:83420361-83420380 MS.gene73458:CDS 35.0%
GGACGTATCATGAATGTTAT+TGG - chr1.4:83418139-83418158 MS.gene73458:CDS 35.0%
GTATGATCATAAGGAAAGCA+TGG + chr1.4:83419846-83419865 None:intergenic 35.0%
GTTGCTTGTTCAACAAAAGT+AGG + chr1.4:83418336-83418355 None:intergenic 35.0%
TGATTGAGAAGAAGAGATTC+TGG + chr1.4:83416847-83416866 None:intergenic 35.0%
TGCTTTCCTTATGATCATAC+AGG - chr1.4:83419846-83419865 MS.gene73458:intron 35.0%
TGGATTGCATAGAAACAAAC+TGG + chr1.4:83420216-83420235 None:intergenic 35.0%
TGTTGTGAGAACTATTGCTA+TGG - chr1.4:83417160-83417179 MS.gene73458:intron 35.0%
TTAATCCAGTAAGACCAACA+CGG + chr1.4:83418955-83418974 None:intergenic 35.0%
TTATGGTGAAGTTCTTTGCA+AGG - chr1.4:83417760-83417779 MS.gene73458:CDS 35.0%
! AGCAAATGTGCTCTTGTTTA+TGG - chr1.4:83418899-83418918 MS.gene73458:intron 35.0%
! ATGATTTGGATAGAGATGGA+CGG + chr1.4:83416806-83416825 None:intergenic 35.0%
! GAACAAGCATTTTACATGGT+TGG - chr1.4:83420308-83420327 MS.gene73458:CDS 35.0%
! GCTCAATCTCAACTTTCTTT+TGG - chr1.4:83417955-83417974 MS.gene73458:CDS 35.0%
!! GGTCACAAGAATTTGTTGTT+CGG + chr1.4:83418358-83418377 None:intergenic 35.0%
AAAGGCAGAGAAGATTGCTA+AGG - chr1.4:83420352-83420371 MS.gene73458:CDS 40.0%
AACATAGATAGCTTGGACAG+AGG + chr1.4:83419298-83419317 None:intergenic 40.0%
AACTATTGCTATGGATGCCA+CGG - chr1.4:83417169-83417188 MS.gene73458:intron 40.0%
AACTTCCAAACAAATCTGGC+AGG + chr1.4:83419918-83419937 None:intergenic 40.0%
AATTCTTGTGACCGGTATCA+AGG - chr1.4:83418365-83418384 MS.gene73458:CDS 40.0%
ACATTGTCTACTGATCTTGG+AGG - chr1.4:83419231-83419250 MS.gene73458:intron 40.0%
ACGGTTAAGAAGGTAAGCAT+AGG + chr1.4:83416880-83416899 None:intergenic 40.0%
AGAAGAGATTCTGGATGTTG+AGG + chr1.4:83416838-83416857 None:intergenic 40.0%
AGAGGTAATTGAACCCTTCT+TGG + chr1.4:83419280-83419299 None:intergenic 40.0%
ATCCAATCTTTCCTCCTCTT+TGG + chr1.4:83418512-83418531 None:intergenic 40.0%
ATCTTTCCTCCTCTTTGGTA+TGG + chr1.4:83418507-83418526 None:intergenic 40.0%
CCAACATTGTCTACTGATCT+TGG - chr1.4:83419228-83419247 MS.gene73458:intron 40.0%
CCAAGATCAGTAGACAATGT+TGG + chr1.4:83419231-83419250 None:intergenic 40.0%
CGGTTAAGAAGGTAAGCATA+GGG + chr1.4:83416879-83416898 None:intergenic 40.0%
CGTATTACAACCACCAAGAA+GGG - chr1.4:83419264-83419283 MS.gene73458:intron 40.0%
GGAAAGATTGGATTGTTTGG+TGG - chr1.4:83418519-83418538 MS.gene73458:intron 40.0%
GGAGAACCTATCGATCATAA+AGG - chr1.4:83418160-83418179 MS.gene73458:CDS 40.0%
GGAGGAAAGATTGGATTGTT+TGG - chr1.4:83418516-83418535 MS.gene73458:intron 40.0%
GTAGGAGCTTCTCTATGAAT+AGG + chr1.4:83418318-83418337 None:intergenic 40.0%
TAATCCAGTAAGACCAACAC+GGG + chr1.4:83418954-83418973 None:intergenic 40.0%
TACAACAGTGTTGTCAAGAC+AGG - chr1.4:83419374-83419393 MS.gene73458:intron 40.0%
TACCAAAGAGGAGGAAAGAT+TGG - chr1.4:83418507-83418526 MS.gene73458:intron 40.0%
TATACAAGTCGTTACCCTCT+CGG + chr1.4:83418750-83418769 None:intergenic 40.0%
TCAAGTCGACATATTTGCCA+GGG + chr1.4:83419776-83419795 None:intergenic 40.0%
TCATTCTACCAGATTGGTGT+TGG - chr1.4:83417112-83417131 MS.gene73458:intron 40.0%
TCTCGATCATTCTACCAGAT+TGG - chr1.4:83417106-83417125 MS.gene73458:intron 40.0%
TGAACATAGATCTCTGAGCT+TGG - chr1.4:83419498-83419517 MS.gene73458:intron 40.0%
TGCTCATCACCCAAAATAAG+TGG + chr1.4:83419573-83419592 None:intergenic 40.0%
TTCAAGTCGACATATTTGCC+AGG + chr1.4:83419777-83419796 None:intergenic 40.0%
TTGGAGGTTGCACAACATAT+GGG - chr1.4:83417131-83417150 MS.gene73458:intron 40.0%
! AATTTTACGAGCACGTGCAA+CGG + chr1.4:83419703-83419722 None:intergenic 40.0%
! AGGGATGATTTGGATAGAGA+TGG + chr1.4:83416810-83416829 None:intergenic 40.0%
! AGTTGGCCTACAATTACATC+AGG + chr1.4:83419158-83419177 None:intergenic 40.0%
! CAAGCATTTTACATGGTTGG+TGG - chr1.4:83420311-83420330 MS.gene73458:CDS 40.0%
! TTTACTGGTAAAGGTGCGAT+TGG - chr1.4:83417002-83417021 MS.gene73458:intron 40.0%
AACAATGTCGCAAAGGCTCA+TGG - chr1.4:83418582-83418601 MS.gene73458:CDS 45.0%
AAGACTTCTGCCACATGGAA+GGG + chr1.4:83419744-83419763 None:intergenic 45.0%
ACTCGGTAACACGGTTAAGA+AGG + chr1.4:83416890-83416909 None:intergenic 45.0%
AGAGATTCTGGATGTTGAGG+TGG + chr1.4:83416835-83416854 None:intergenic 45.0%
ATACAAGTCGTTACCCTCTC+GGG + chr1.4:83418749-83418768 None:intergenic 45.0%
ATTTACACTGATAGGGGAGC+CGG + chr1.4:83417228-83417247 None:intergenic 45.0%
ATTTGGATAGAGATGGACGG+AGG + chr1.4:83416803-83416822 None:intergenic 45.0%
CAAGTCGACATATTTGCCAG+GGG + chr1.4:83419775-83419794 None:intergenic 45.0%
CAGCAGGAACATAGATAGCT+TGG + chr1.4:83419305-83419324 None:intergenic 45.0%
CATCTTGTCCTTCAGCATCA+CGG + chr1.4:83418994-83419013 None:intergenic 45.0%
CTATCCTGCTGTTGATCCAT+TGG - chr1.4:83419524-83419543 MS.gene73458:intron 45.0%
CTGTAGCATACTCGGTAACA+CGG + chr1.4:83416899-83416918 None:intergenic 45.0%
GAACATTTCCGTGATGCTGA+AGG - chr1.4:83418983-83419002 MS.gene73458:CDS 45.0%
GAATCCAATGGATCAACAGC+AGG + chr1.4:83419531-83419550 None:intergenic 45.0%
GAGAGTGGAGTCATTAAGCT+TGG - chr1.4:83418781-83418800 MS.gene73458:CDS 45.0%
GCGTATTACAACCACCAAGA+AGG - chr1.4:83419263-83419282 MS.gene73458:intron 45.0%
GGTAATTGAACCCTTCTTGG+TGG + chr1.4:83419277-83419296 None:intergenic 45.0%
GTAATTGTAGGCCAACTCAG+AGG - chr1.4:83419161-83419180 MS.gene73458:intron 45.0%
GTGGATGTGAGATTCGAAGA+AGG - chr1.4:83417053-83417072 MS.gene73458:intron 45.0%
GTTGCACAACATATGGGTGA+AGG - chr1.4:83417137-83417156 MS.gene73458:intron 45.0%
GTTGGAGGTTGCACAACATA+TGG - chr1.4:83417130-83417149 MS.gene73458:intron 45.0%
TGAACTAATGCAGGGTGTGT+TGG - chr1.4:83420262-83420281 MS.gene73458:CDS 45.0%
TGTAGCATCCAAGTGAGCAA+AGG + chr1.4:83419358-83419377 None:intergenic 45.0%
TTTGGATAGAGATGGACGGA+GGG + chr1.4:83416802-83416821 None:intergenic 45.0%
! AATTCCATTCAGGTTCCCGT+TGG - chr1.4:83418103-83418122 MS.gene73458:CDS 45.0%
! CATTAAGCTTGGTGATCAGC+AGG - chr1.4:83418792-83418811 MS.gene73458:CDS 45.0%
! CATTGCCTGCCAGATTTGTT+TGG - chr1.4:83419910-83419929 MS.gene73458:CDS 45.0%
! GTGAAGTGTCTGTGCTACAT+TGG - chr1.4:83417890-83417909 MS.gene73458:CDS 45.0%
!! ATTGGATTGTTTGGTGGTGC+TGG - chr1.4:83418525-83418544 MS.gene73458:intron 45.0%
!! GGTTGATAACCAACAGCAGA+TGG + chr1.4:83419210-83419229 None:intergenic 45.0%
!! TACTTGTTGTACACCTCGAG+CGG + chr1.4:83419604-83419623 None:intergenic 45.0%
!! TTCTACCAGATTGGTGTTGG+AGG - chr1.4:83417115-83417134 MS.gene73458:intron 45.0%
!!! GGTGGTTTCTCTGTTTTTGC+CGG - chr1.4:83418709-83418728 MS.gene73458:intron 45.0%
!!! TTCTCTGTTTTTGCCGGTGT+TGG - chr1.4:83418715-83418734 MS.gene73458:intron 45.0%
AAGAAAGTTCCTGACGGTGG+TGG - chr1.4:83416963-83416982 MS.gene73458:intron 50.0%
AAGTGAGCAAAGGTGGTAGC+TGG + chr1.4:83419348-83419367 None:intergenic 50.0%
ACCTCGAGCGCAGTAAGAAT+AGG + chr1.4:83417086-83417105 None:intergenic 50.0%
AGATGGAATGCGACCAAGCA+AGG + chr1.4:83419193-83419212 None:intergenic 50.0%
AGCATCCAAGTGAGCAAAGG+TGG + chr1.4:83419355-83419374 None:intergenic 50.0%
AGCTACCACCTTTGCTCACT+TGG - chr1.4:83419347-83419366 MS.gene73458:intron 50.0%
ATTGCTATGGATGCCACGGA+AGG - chr1.4:83417173-83417192 MS.gene73458:intron 50.0%
CAGTGAAGACTTCTGCCACA+TGG + chr1.4:83419749-83419768 None:intergenic 50.0%
CATGTGGCAGAAGTCTTCAC+TGG - chr1.4:83419747-83419766 MS.gene73458:intron 50.0%
CCACGGAAGGAGTTGTTAGA+GGG - chr1.4:83417186-83417205 MS.gene73458:intron 50.0%
CCGGCTAAGAAAGTTCCTGA+CGG - chr1.4:83416957-83416976 MS.gene73458:intron 50.0%
CCGTCAGGAACTTTCTTAGC+CGG + chr1.4:83416960-83416979 None:intergenic 50.0%
CTAATGCAGGGTGTGTTGGA+TGG - chr1.4:83420266-83420285 MS.gene73458:CDS 50.0%
CTCCTCTTTGGTATGGTGCA+AGG + chr1.4:83418500-83418519 None:intergenic 50.0%
CTCCTTGCACCATACCAAAG+AGG - chr1.4:83418495-83418514 MS.gene73458:intron 50.0%
CTTAAGTCAGCCCTTCCATG+TGG - chr1.4:83419731-83419750 MS.gene73458:intron 50.0%
CTTGCACCATACCAAAGAGG+AGG - chr1.4:83418498-83418517 MS.gene73458:intron 50.0%
GAAGACTTCTGCCACATGGA+AGG + chr1.4:83419745-83419764 None:intergenic 50.0%
GCTAAGAAAGTTCCTGACGG+TGG - chr1.4:83416960-83416979 MS.gene73458:intron 50.0%
GGACAGGTTTGTCAGGTGAT+TGG - chr1.4:83417023-83417042 MS.gene73458:intron 50.0%
GGATCTGTCAAGTCATCAGC+AGG + chr1.4:83419321-83419340 None:intergenic 50.0%
GTAATCTTTCCACCACCGTC+AGG + chr1.4:83416975-83416994 None:intergenic 50.0%
TCAGGAACTTTCTTAGCCGG+AGG + chr1.4:83416957-83416976 None:intergenic 50.0%
TCCTATTCTTACTGCGCTCG+AGG - chr1.4:83417082-83417101 MS.gene73458:intron 50.0%
TCGAGCGCAGTAAGAATAGG+AGG + chr1.4:83417083-83417102 None:intergenic 50.0%
TCTGGATGTTGAGGTGGTGA+GGG + chr1.4:83416829-83416848 None:intergenic 50.0%
TGAGGTGGTGAGGGATGATT+TGG + chr1.4:83416820-83416839 None:intergenic 50.0%
TGCAACCTCCAACACCAATC+TGG + chr1.4:83417123-83417142 None:intergenic 50.0%
TGCGATTGGACAGGTTTGTC+AGG - chr1.4:83417016-83417035 MS.gene73458:intron 50.0%
TTCTGGATGTTGAGGTGGTG+AGG + chr1.4:83416830-83416849 None:intergenic 50.0%
! TCCAAGAGTACACCTGCCAA+CGG + chr1.4:83418122-83418141 None:intergenic 50.0%
! TGGTAAAGGTGCGATTGGAC+AGG - chr1.4:83417007-83417026 MS.gene73458:intron 50.0%
!! TTGTCAGGTGATTGGTGCTG+TGG - chr1.4:83417031-83417050 MS.gene73458:intron 50.0%
!! TTGTTTGGTGGTGCTGGTGT+AGG - chr1.4:83418531-83418550 MS.gene73458:intron 50.0%
CAAGGCAGACACCTCTGAGT+TGG + chr1.4:83419175-83419194 None:intergenic 55.0%
CCCTCTAACAACTCCTTCCG+TGG + chr1.4:83417189-83417208 None:intergenic 55.0%
CGGAAGGAGTTGTTAGAGGG+TGG - chr1.4:83417189-83417208 MS.gene73458:intron 55.0%
GCCACGGAAGGAGTTGTTAG+AGG - chr1.4:83417185-83417204 MS.gene73458:intron 55.0%
GGTCGCATTCCATCTGCTGT+TGG - chr1.4:83419198-83419217 MS.gene73458:intron 55.0%
GTTGGAGAACGAACCCGAGA+GGG - chr1.4:83418733-83418752 MS.gene73458:intron 55.0%
TACCGAGTATGCTACAGCCG+CGG - chr1.4:83416902-83416921 MS.gene73458:intron 55.0%
TCGGGTTCGTTCTCCAACAC+CGG + chr1.4:83418731-83418750 None:intergenic 55.0%
TGTTGGAGAACGAACCCGAG+AGG - chr1.4:83418732-83418751 MS.gene73458:intron 55.0%
TTCTTAGCCGGAGGAGTCTG+AGG + chr1.4:83416948-83416967 None:intergenic 55.0%
! CCAAGAGTACACCTGCCAAC+GGG + chr1.4:83418121-83418140 None:intergenic 55.0%
!! TCAGAGGTGTCTGCCTTGCT+TGG - chr1.4:83419177-83419196 MS.gene73458:intron 55.0%
!! TCAGGTGATTGGTGCTGTGG+TGG - chr1.4:83417034-83417053 MS.gene73458:intron 55.0%
AGCCGCGGCTGTAGCATACT+CGG + chr1.4:83416907-83416926 None:intergenic 60.0%
CCCGTTGGCAGGTGTACTCT+TGG - chr1.4:83418118-83418137 MS.gene73458:CDS 60.0%
CCTGCCAACGGGAACCTGAA+TGG + chr1.4:83418110-83418129 None:intergenic 60.0%
GAAGTCTTCACTGGTGCCCC+TGG - chr1.4:83419756-83419775 MS.gene73458:intron 60.0%
GAGCACTACGAAACCGCTCG+AGG - chr1.4:83419588-83419607 MS.gene73458:intron 60.0%
GCAAAGGTGGTAGCTGGAGC+AGG + chr1.4:83419342-83419361 None:intergenic 60.0%
GGATAGAGATGGACGGAGGG+AGG + chr1.4:83416799-83416818 None:intergenic 60.0%
GGGTGGCGTGTTCTCAACAC+CGG - chr1.4:83417206-83417225 MS.gene73458:intron 60.0%
GGTCAAATGAACGAGCCCCC+TGG - chr1.4:83418920-83418939 MS.gene73458:intron 60.0%
TTAGCCGGAGGAGTCTGAGG+AGG + chr1.4:83416945-83416964 None:intergenic 60.0%
! CCATTCAGGTTCCCGTTGGC+AGG - chr1.4:83418107-83418126 MS.gene73458:CDS 60.0%
!! CGTGCCCGTGTTGGTCTTAC+TGG - chr1.4:83418947-83418966 MS.gene73458:intron 60.0%
AACACGGGCACGAGCACCAG+GGG + chr1.4:83418939-83418958 None:intergenic 65.0%
CAACACGGGCACGAGCACCA+GGG + chr1.4:83418940-83418959 None:intergenic 65.0%
CGCTCCTCCTCAGACTCCTC+CGG - chr1.4:83416938-83416957 MS.gene73458:intron 65.0%
CGGAGGAGTCTGAGGAGGAG+CGG + chr1.4:83416940-83416959 None:intergenic 65.0%
GGAGGAGTCTGAGGAGGAGC+GGG + chr1.4:83416939-83416958 None:intergenic 65.0%
ACACGGGCACGAGCACCAGG+GGG + chr1.4:83418938-83418957 None:intergenic 70.0%
CCAACACGGGCACGAGCACC+AGG + chr1.4:83418941-83418960 None:intergenic 70.0%
CCTGGTGCTCGTGCCCGTGT+TGG - chr1.4:83418938-83418957 MS.gene73458:intron 70.0%
AGCGGGAGCTGCAGCAGCCG+CGG + chr1.4:83416922-83416941 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 83416759 83420388 83416759 ID=MS.gene73458
chr1.4 mRNA 83416759 83420388 83416759 ID=MS.gene73458.t1;Parent=MS.gene73458
chr1.4 exon 83419906 83420388 83419906 ID=MS.gene73458.t1.exon1;Parent=MS.gene73458.t1
chr1.4 CDS 83419906 83420388 83419906 ID=cds.MS.gene73458.t1;Parent=MS.gene73458.t1
chr1.4 exon 83418957 83419032 83418957 ID=MS.gene73458.t1.exon2;Parent=MS.gene73458.t1
chr1.4 CDS 83418957 83419032 83418957 ID=cds.MS.gene73458.t1;Parent=MS.gene73458.t1
chr1.4 exon 83418761 83418849 83418761 ID=MS.gene73458.t1.exon3;Parent=MS.gene73458.t1
chr1.4 CDS 83418761 83418849 83418761 ID=cds.MS.gene73458.t1;Parent=MS.gene73458.t1
chr1.4 exon 83418544 83418661 83418544 ID=MS.gene73458.t1.exon4;Parent=MS.gene73458.t1
chr1.4 CDS 83418544 83418661 83418544 ID=cds.MS.gene73458.t1;Parent=MS.gene73458.t1
chr1.4 exon 83418334 83418437 83418334 ID=MS.gene73458.t1.exon5;Parent=MS.gene73458.t1
chr1.4 CDS 83418334 83418437 83418334 ID=cds.MS.gene73458.t1;Parent=MS.gene73458.t1
chr1.4 exon 83418096 83418254 83418096 ID=MS.gene73458.t1.exon6;Parent=MS.gene73458.t1
chr1.4 CDS 83418096 83418254 83418096 ID=cds.MS.gene73458.t1;Parent=MS.gene73458.t1
chr1.4 exon 83417752 83417976 83417752 ID=MS.gene73458.t1.exon7;Parent=MS.gene73458.t1
chr1.4 CDS 83417752 83417976 83417752 ID=cds.MS.gene73458.t1;Parent=MS.gene73458.t1
chr1.4 exon 83417329 83417640 83417329 ID=MS.gene73458.t1.exon8;Parent=MS.gene73458.t1
chr1.4 CDS 83417329 83417640 83417329 ID=cds.MS.gene73458.t1;Parent=MS.gene73458.t1
chr1.4 exon 83416759 83416872 83416759 ID=MS.gene73458.t1.exon9;Parent=MS.gene73458.t1
chr1.4 CDS 83416759 83416872 83416759 ID=cds.MS.gene73458.t1;Parent=MS.gene73458.t1
Gene Sequence

>MS.gene73458

ATGGCTTCACGGAGAATCGTTTCATCTTTGATACGTTCCTCCCTCCGTCCATCTCTATCCAAATCATCCCTCACCACCTCAACATCCAGAATCTCTTCTTCTCAATCACGTGCATCTCCCTATGCTTACCTTCTTAACCGTGTTACCGAGTATGCTACAGCCGCGGCTGCTGCAGCTCCCGCTCCTCCTCAGACTCCTCCGGCTAAGAAAGTTCCTGACGGTGGTGGAAAGATTACAGATGAATTTACTGGTAAAGGTGCGATTGGACAGGTTTGTCAGGTGATTGGTGCTGTGGTGGATGTGAGATTCGAAGAAGGTTTGCCTCCTATTCTTACTGCGCTCGAGGTTCTCGATCATTCTACCAGATTGGTGTTGGAGGTTGCACAACATATGGGTGAAGGTGTTGTGAGAACTATTGCTATGGATGCCACGGAAGGAGTTGTTAGAGGGTGGCGTGTTCTCAACACCGGCTCCCCTATCAGTGTAAATACTTGTTCACTTGCTGCAATTTATTCATATTTCTTTAGTTAAATGTCATTTTTCCAATCTATATATCACCATCATCTTAGATTGAAGAAATAGACACATTTTTACATTCAATCACTTCTATTTTTTGTGTGTATATTTCAATATGTTTAATGTCTGTGTTAATGTTTCATGATCTTCCTTTCGTGTTTGTAACAAATAAAACATACAATGGCTTAAAAGTATCATATGTTTCAATTTCTATTTAGATTGAGATAAAAACAACTTTATATGTTGTTTTGTGTGAACATATATACATAACTTTTTTCTATAATGATCACAACATTCGTAACCATTCACTGATTAAATTACTTCATAGTGAAATATCAAAAAAAGTGTGTTTTCTTATCATTTTCAACACATTTTTCTATGTCGTTGTGTTTTCTTCTATCACATTTTCTATTATGAAGAATATTAGGTGATTTGATATAAATCAATATGAGTAATTTTTTATTCCATTAATTAAGTTTCTTGTTTTATGGTGAAGTTCTTTGCAAGGATATTGTTTTTGTTAGTTAGTCTATGAATTATACGACTATGAAACACTCACTTATAATAAGCAAATGAAAGTGTTAGTAAGTCTATCATATCATATATATCTTAAACGTGAAGTGTCTGTGCTACATTGGTTTACGATCATATTGCTATTGTGAATGTGATCTAATCAATCTGCTCAATCTCAACTTTCTTTTGGACTTGCATTTTGCTGACATGAATTTAGCCCCACATAGTTTATACTTTTCATTTTGTGTCTCTCAGTATCATTGAATTTCTATATTTTCTTTCAAAAAGCGTTTAAGTATATACTAAATGCTTGTGAATTCCATTCAGGTTCCCGTTGGCAGGTGTACTCTTGGACGTATCATGAATGTTATTGGAGAACCTATCGATCATAAAGGCGAATTTAGTAAGAAACCTCAAAATCTTTTTTCAGTCCATTTGCTCTAACAATGTTTTTCTATCAATTCCATGGAATGTTTTTCAACTCATGATAAATTTTGTGAATTGCTTTAGAAACCGAGCATTTTTTGCCTATTCATAGAGAAGCTCCTACTTTTGTTGAACAAGCAACCGAACAACAAATTCTTGTGACCGGTATCAAGGTATTGTATTTGCGAATGCATCAATCTCATTTTATTAAATGTTGACGTCTGCAAATATCTAATGTCTTTTACCAATCTTACATGATTTTTTTCATACAGGTTGTTGATCTCCTTGCACCATACCAAAGAGGAGGAAAGATTGGATTGTTTGGTGGTGCTGGTGTAGGAAAAACTGTGCTTATTATGGAACTTATTAACAATGTCGCAAAGGCTCATGGTATATATATGTGCTAAGTAAACATGCACTCAATTATTCTTGTTAAAATGCTCTTTAACATTTGTATATATACTATTGTATTCTGAGTGTTTCCATTTATTATCAGGTGGTTTCTCTGTTTTTGCCGGTGTTGGAGAACGAACCCGAGAGGGTAACGACTTGTATAGAGAAATGATTGAGAGTGGAGTCATTAAGCTTGGTGATCAGCAGGTGAACACAATGTTGTTCATGACTCACATTCTATTTATGTTTATCAAAGTTCTTAACTATGGTTGTTTCATTGATTCAGAGTGAAAGCAAATGTGCTCTTGTTTATGGTCAAATGAACGAGCCCCCTGGTGCTCGTGCCCGTGTTGGTCTTACTGGATTAACTGTTGCTGAACATTTCCGTGATGCTGAAGGACAAGATGTGCTTCTTTTCGTTGATAACATTTTCCGCTTTACTCAAGTATGCAAATTATCTAGGATAATCTATCTTCTATATATTTATCGATATTTTTGCTCATGTTCTCCTTTTAATATGAGAGTTATAATTGATCGACATTATAATGCCTGATGTAATTGTAGGCCAACTCAGAGGTGTCTGCCTTGCTTGGTCGCATTCCATCTGCTGTTGGTTATCAACCAACATTGTCTACTGATCTTGGAGGTCTTCAAGAGCGTATTACAACCACCAAGAAGGGTTCAATTACCTCTGTCCAAGCTATCTATGTTCCTGCTGATGACTTGACAGATCCTGCTCCAGCTACCACCTTTGCTCACTTGGATGCTACAACAGTGTTGTCAAGACAGGTTCGATCACTATGTTAATATTGATTAATTAAACTAAAGTGGCAATTGTAATGATATTTTTGGTTGTTATCATTAACTAAATAATTTGATTTGGATAAATATTGAACATAGATCTCTGAGCTTGGTATCTATCCTGCTGTTGATCCATTGGATTCAACATCTCGTATGCTTTCACCACTTATTTTGGGTGATGAGCACTACGAAACCGCTCGAGGTGTACAACAAGTACTTCAAAACTACAAGAATCTTCAAGATATCATTGCTATTTTGGGAATGGATGAGCTAAGTGAAGATGATAAATTGACCGTTGCACGTGCTCGTAAAATTCAACGATTCTTAAGTCAGCCCTTCCATGTGGCAGAAGTCTTCACTGGTGCCCCTGGCAAATATGTCGACTTGAAAGAGAATTGTACTAGTTTCAAGGTACTTTTTTCTTTACTTTTCTCTCCATGCTTTCCTTATGATCATACAGGAACTTATTTGGTTACTATCATTTCATTTTTTCTACTCAAAGCATTGCCTGCCAGATTTGTTTGGAAGTTGCTTATCTTTTGCTCCTTCACTAATATCACTATCTATATGAACCTATTCCTTGGGAATTTTCTTTTCAATACTCGAAGCTTATTATAAGGGTTTAGAGTGTTTGTTTAAGCTAATGTTTATATACACTTCTTTCTGGAAGTGTTTGTTTAAATTAAGGTTTTTATAGGAAAACCGGTATTTTAGTTAAAAAATATAAAATAATCTGAAAATTATTTATTTGACTAACTTCTGAAAATAAATGTAATTTTTATTACATATGAGTTCACTTTAACTACCAGTTTGTTTCTATGCAATCCACAAACAATTTGACCGGATTTTCTCTATGAACTAATGCAGGGTGTGTTGGATGGCAAATACGATGACCTTTCAGAACAAGCATTTTACATGGTTGGTGGTATTGATGAAGTCATTGCAAAGGCAGAGAAGATTGCTAAGGAAAATGCGGCTTAA
Protein sequence

>MS.gene73458.t1

MASRRIVSSLIRSSLRPSLSKSSLTTSTSRISSSQSRASPYAYLLNRVTEYATAAAAAAPAPPQTPPAKKVPDGGGKITDEFTGKGAIGQVCQVIGAVVDVRFEEGLPPILTALEVLDHSTRLVLEVAQHMGEGVVRTIAMDATEGVVRGWRVLNTGSPISVPVGRCTLGRIMNVIGEPIDHKGEFKTEHFLPIHREAPTFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDQQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLSTDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPLILGDEHYETARGVQQVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVDLKENCTSFKGVLDGKYDDLSEQAFYMVGGIDEVIAKAEKIAKENAA