AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75018

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75018.t1 MTR_1g108770 99.284 559 4 0 1 559 1 559 0.0 1134
MS.gene75018.t1 MTR_1g108765 93.023 559 36 3 1 559 1 556 0.0 1009
MS.gene75018.t1 MTR_7g021780 69.703 472 136 3 85 550 17 487 0.0 629
MS.gene75018.t1 MTR_4g451275 69.474 475 138 3 85 553 17 490 0.0 629
MS.gene75018.t1 MTR_3g035730 68.842 475 141 3 85 553 17 490 0.0 622
MS.gene75018.t1 MTR_0002s0650 68.817 465 136 4 89 547 21 482 0.0 615
MS.gene75018.t1 MTR_7g033765 68.904 447 132 3 85 525 17 462 0.0 585
MS.gene75018.t1 MTR_7g033755 61.247 449 106 4 107 550 1 386 4.47e-178 512
MS.gene75018.t1 MTR_2g066870 60.152 394 143 5 162 552 29 411 3.69e-158 458
MS.gene75018.t1 MTR_1829s0010 76.577 222 52 0 319 540 1 222 3.64e-119 355
MS.gene75018.t1 MTR_7g117920 65.248 282 91 3 85 360 17 297 1.08e-108 328
MS.gene75018.t1 MTR_6g055020 63.774 265 89 3 85 343 17 280 2.87e-97 297
MS.gene75018.t1 MTR_2g066860 57.927 164 53 5 1 162 2 151 8.24e-47 162
MS.gene75018.t1 MTR_1g076100 70.000 80 24 0 376 455 5 84 6.12e-32 118
MS.gene75018.t1 MTR_4g010980 47.015 134 65 2 86 213 15 148 1.84e-28 111
MS.gene75018.t1 MTR_1g112870 28.642 405 251 12 118 496 52 444 1.06e-27 117
MS.gene75018.t1 MTR_7g081010 28.713 404 251 13 118 496 51 442 1.24e-27 116
MS.gene75018.t1 MTR_4g005410 28.313 332 212 9 183 496 203 526 4.44e-26 113
MS.gene75018.t1 MTR_5g090750 76.786 56 13 0 459 514 21 76 9.31e-23 92.4
MS.gene75018.t1 MTR_0002s0550 24.104 502 310 17 88 556 29 492 7.56e-19 90.1
MS.gene75018.t1 MTR_0212s0040 25.253 297 201 4 153 437 90 377 2.55e-18 89.4
MS.gene75018.t1 MTR_2g009560 45.833 72 36 1 480 551 3 71 9.66e-14 67.4
MS.gene75018.t1 MTR_3g099550 73.333 45 12 0 101 145 10 54 1.06e-13 67.8
MS.gene75018.t1 MTR_3g065340 59.259 54 21 1 88 141 55 107 2.75e-13 67.8
MS.gene75018.t1 MTR_7g498250 70.833 48 12 2 1 48 1 46 7.03e-11 60.5
MS.gene75018.t1 MTR_7g498250 70.833 48 12 2 1 48 1 46 9.14e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75018.t1 AT5G08680 84.351 524 75 2 38 559 41 559 0.0 902
MS.gene75018.t1 AT5G08690 84.121 529 77 2 33 559 33 556 0.0 891
MS.gene75018.t1 AT5G08670 84.181 531 76 3 32 559 31 556 0.0 890
MS.gene75018.t1 ATCG00480 68.267 479 145 3 85 557 17 494 0.0 631
MS.gene75018.t1 AT1G20260 28.642 405 251 12 118 496 50 442 2.16e-28 119
MS.gene75018.t1 AT1G76030 28.822 399 248 11 118 492 50 436 4.62e-28 118
MS.gene75018.t1 AT4G38510 28.218 404 253 12 118 496 58 449 1.01e-27 117
MS.gene75018.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.01e-27 117
MS.gene75018.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.01e-27 117
MS.gene75018.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.01e-27 117
MS.gene75018.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.01e-27 117
MS.gene75018.t1 AT1G78900 27.635 351 223 10 211 544 229 565 3.23e-26 113
MS.gene75018.t1 AT1G78900 27.635 351 223 10 211 544 229 565 3.23e-26 113
MS.gene75018.t1 ATMG01190 25.667 300 202 4 150 437 87 377 2.53e-19 91.7
MS.gene75018.t1 AT2G07698 25.589 297 200 4 153 437 360 647 1.07e-18 90.5
MS.gene75018.t1 ATCG00120 24.651 430 271 14 101 513 54 447 6.74e-17 84.3

Find 154 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGATATCATTGCTATTT+TGG 0.086458 1.3:-74220331 MS.gene75018:CDS
TATGCTTTCACCACTTATTT+TGG 0.102924 1.3:-74220415 MS.gene75018:CDS
AGCAAATGTGCTCTTGTTTA+TGG 0.159877 1.3:-74221076 MS.gene75018:CDS
CGTGCCCGTGTTGGTCTTAC+TGG 0.164716 1.3:-74221028 MS.gene75018:CDS
GGACGTATCATGAATGTTAT+TGG 0.260657 1.3:-74221831 MS.gene75018:CDS
ATCCAATCTTTCCTCCTCTT+TGG 0.273825 1.3:+74221466 None:intergenic
AGCTACCACCTTTGCTCACT+TGG 0.316716 1.3:-74220628 MS.gene75018:CDS
AAGATTACAGATGAATTTAC+TGG 0.354465 1.3:-74222985 MS.gene75018:CDS
TGATTGAGAAGAAGAGATTC+TGG 0.357390 1.3:+74223128 None:intergenic
GGAGGAAAGATTGGATTGTT+TGG 0.361136 1.3:-74221459 MS.gene75018:CDS
AGAGGTAATTGAACCCTTCT+TGG 0.378135 1.3:+74220698 None:intergenic
CCAACACGGGCACGAGCACC+AGG 0.380050 1.3:+74221037 None:intergenic
ATTGGATTGTTTGGTGGTGC+TGG 0.384032 1.3:-74221450 MS.gene75018:CDS
TGAGGTGGTGAGGGATGATT+TGG 0.386496 1.3:+74223155 None:intergenic
CTATCCTGCTGTTGATCCAT+TGG 0.388341 1.3:-74220451 MS.gene75018:CDS
ATCTTTCCTCCTCTTTGGTA+TGG 0.392214 1.3:+74221471 None:intergenic
CCAACATTGTCTACTGATCT+TGG 0.396356 1.3:-74220747 MS.gene75018:CDS
GAACAAGTATTTACACTGAT+AGG 0.402727 1.3:+74222739 None:intergenic
GTAGGAGCTTCTCTATGAAT+AGG 0.403993 1.3:+74221655 None:intergenic
CTCTTTGAAAGATGGCTTCA+CGG 0.408787 1.3:-74223224 None:intergenic
CCATTCAGGTTCCCGTTGGC+AGG 0.418779 1.3:-74221863 MS.gene75018:intron
CCCGTTGGCAGGTGTACTCT+TGG 0.425281 1.3:-74221852 MS.gene75018:CDS
TGCGATTGGACAGGTTTGTC+AGG 0.431621 1.3:-74222956 MS.gene75018:CDS
TACCAAAGAGGAGGAAAGAT+TGG 0.432147 1.3:-74221468 MS.gene75018:CDS
ACAGATGAATTTACTGGTAA+AGG 0.438215 1.3:-74222979 MS.gene75018:CDS
AGAGAATTGTACTAGTTTCA+AGG 0.440200 1.3:-74220178 MS.gene75018:intron
CTCCTCTTTGGTATGGTGCA+AGG 0.442168 1.3:+74221478 None:intergenic
GCCACGGAAGGAGTTGTTAG+AGG 0.442751 1.3:-74222787 MS.gene75018:CDS
GGACAGGTTTGTCAGGTGAT+TGG 0.443988 1.3:-74222949 MS.gene75018:CDS
GAAGTCTTCACTGGTGCCCC+TGG 0.444882 1.3:-74220219 MS.gene75018:CDS
TATACAAGTCGTTACCCTCT+CGG 0.450847 1.3:+74221228 None:intergenic
GGAGGAGTCTGAGGAGGAGC+GGG 0.453232 1.3:+74223036 None:intergenic
GTTGGAGGTTGCACAACATA+TGG 0.453780 1.3:-74222842 MS.gene75018:CDS
GGTCGCATTCCATCTGCTGT+TGG 0.461688 1.3:-74220777 MS.gene75018:CDS
ACCTCGAGCGCAGTAAGAAT+CGG 0.464761 1.3:+74222889 None:intergenic
AGCGGGAGCTGCAGCAGCCG+CGG 0.467946 1.3:+74223053 None:intergenic
TTGTTTGGTGGTGCTGGTGT+AGG 0.469965 1.3:-74221444 MS.gene75018:CDS
TTCTACCAGATTGGTGTTGG+AGG 0.474155 1.3:-74222857 MS.gene75018:CDS
AACAAGTATTTACACTGATA+GGG 0.474457 1.3:+74222740 None:intergenic
TTCAAGTCGACATATTTGCC+AGG 0.475504 1.3:+74220201 None:intergenic
GTTGCTTGTTCAACAAAAGT+AGG 0.475828 1.3:+74221637 None:intergenic
AAGTGAGCAAAGGTGGTAGC+TGG 0.477958 1.3:+74220630 None:intergenic
GGAGAACCTATCGATCATAA+AGG 0.484786 1.3:-74221810 MS.gene75018:CDS
TCAGAGGTGTCTGCCTTGCT+TGG 0.485682 1.3:-74220798 MS.gene75018:CDS
AATTCTTGTGACCGGTATCA+AGG 0.486500 1.3:-74221605 MS.gene75018:intron
TGCAACCTCCAACACCAATC+TGG 0.487446 1.3:+74222852 None:intergenic
TCTCGATCATTCTACCAGAT+TGG 0.487639 1.3:-74222866 MS.gene75018:CDS
CAGCAGGAACATAGATAGCT+TGG 0.488213 1.3:+74220673 None:intergenic
AGAAGAGATTCTGGATGTTG+AGG 0.489907 1.3:+74223137 None:intergenic
ATACAAGTCGTTACCCTCTC+GGG 0.496422 1.3:+74221229 None:intergenic
TGGTAAAGGTGCGATTGGAC+AGG 0.502211 1.3:-74222965 MS.gene75018:CDS
CATGTGGCAGAAGTCTTCAC+TGG 0.503014 1.3:-74220228 MS.gene75018:CDS
TTTACTGGTAAAGGTGCGAT+TGG 0.504437 1.3:-74222970 MS.gene75018:CDS
CGCTCCTCCTCAGACTCCTC+CGG 0.504794 1.3:-74223034 MS.gene75018:CDS
CATTAAGCTTGGTGATCAGC+AGG 0.509927 1.3:-74221183 MS.gene75018:intron
TATAGAGAAATGATTGAGAG+TGG 0.511529 1.3:-74221209 MS.gene75018:CDS
GCAAAGGTGGTAGCTGGAGC+AGG 0.511863 1.3:+74220636 None:intergenic
TCATTCTACCAGATTGGTGT+TGG 0.514550 1.3:-74222860 MS.gene75018:CDS
TTCTGGATGTTGAGGTGGTG+AGG 0.515925 1.3:+74223145 None:intergenic
CCAAGAGTACACCTGCCAAC+GGG 0.515968 1.3:+74221852 None:intergenic
CCTGGTGCTCGTGCCCGTGT+TGG 0.516375 1.3:-74221037 MS.gene75018:CDS
TGTAAAATGCTTGTTCTGAA+AGG 0.518148 1.3:+74219632 None:intergenic
GAAGACTTCTGCCACATGGA+AGG 0.519142 1.3:+74220233 None:intergenic
GGTAATTGAACCCTTCTTGG+TGG 0.519165 1.3:+74220701 None:intergenic
TGAACTAATGCAGGGTGTGT+TGG 0.523112 1.3:-74219671 MS.gene75018:intron
GTAATCTTTCCACCACCGTC+AGG 0.524642 1.3:+74223000 None:intergenic
TGCTCATCACCCAAAATAAG+TGG 0.527620 1.3:+74220405 None:intergenic
GGTCACAAGAATTTGTTGTT+CGG 0.528371 1.3:+74221615 None:intergenic
CCGTCAGGAACTTTCTTAGC+CGG 0.528890 1.3:+74223015 None:intergenic
GAGAGTGGAGTCATTAAGCT+TGG 0.530056 1.3:-74221194 MS.gene75018:CDS
AACAATGTCGCAAAGGCTCA+TGG 0.531884 1.3:-74221393 MS.gene75018:intron
AACTATTGCTATGGATGCCA+CGG 0.532047 1.3:-74222803 MS.gene75018:CDS
TCAGGTGATTGGTGCTGTGG+TGG 0.537904 1.3:-74222938 MS.gene75018:CDS
GGATCTGTCAAGTCATCAGC+AGG 0.539160 1.3:+74220657 None:intergenic
TCTGGATGTTGAGGTGGTGA+GGG 0.539855 1.3:+74223146 None:intergenic
AATTCGCCTTTATGATCGAT+AGG 0.542417 1.3:+74221804 None:intergenic
GAATCCAATGGATCAACAGC+AGG 0.543347 1.3:+74220447 None:intergenic
AAGACTTCTGCCACATGGAA+GGG 0.546375 1.3:+74220234 None:intergenic
GCGTATTACAACCACCAAGA+AGG 0.546572 1.3:-74220712 MS.gene75018:CDS
AGGGATGATTTGGATAGAGA+TGG 0.547033 1.3:+74223165 None:intergenic
TTCTTAGCCGGAGGAGTCTG+AGG 0.548263 1.3:+74223027 None:intergenic
AACACGGGCACGAGCACCAG+GGG 0.551252 1.3:+74221039 None:intergenic
AGCCGCGGCTGTAGCATACT+CGG 0.552420 1.3:+74223068 None:intergenic
AAGAAAGTTCCTGACGGTGG+TGG 0.552444 1.3:-74223009 MS.gene75018:CDS
ACTCGGTAACACGGTTAAGA+AGG 0.555449 1.3:+74223085 None:intergenic
CGGAGGAGTCTGAGGAGGAG+CGG 0.557119 1.3:+74223035 None:intergenic
CAAGGCAGACACCTCTGAGT+TGG 0.558674 1.3:+74220803 None:intergenic
TACAACAGTGTTGTCAAGAC+AGG 0.559306 1.3:-74220601 MS.gene75018:intron
TCCGATTCTTACTGCGCTCG+AGG 0.564136 1.3:-74222890 MS.gene75018:CDS
AGATGGAATGCGACCAAGCA+AGG 0.564270 1.3:+74220785 None:intergenic
GGTTGATAACCAACAGCAGA+TGG 0.565470 1.3:+74220768 None:intergenic
ACGGTTAAGAAGGTAAGCAT+AGG 0.566888 1.3:+74223095 None:intergenic
CCCTCTAACAACTCCTTCCG+TGG 0.568223 1.3:+74222786 None:intergenic
AACATAGATAGCTTGGACAG+AGG 0.572715 1.3:+74220680 None:intergenic
ATTTACACTGATAGGGGAGC+CGG 0.574020 1.3:+74222747 None:intergenic
CAACACGGGCACGAGCACCA+GGG 0.575730 1.3:+74221038 None:intergenic
CGTATTACAACCACCAAGAA+GGG 0.576665 1.3:-74220711 MS.gene75018:CDS
TTGTCAGGTGATTGGTGCTG+TGG 0.581396 1.3:-74222941 MS.gene75018:CDS
GGAAAGATTGGATTGTTTGG+TGG 0.584577 1.3:-74221456 MS.gene75018:CDS
TGAACATAGATCTCTGAGCT+TGG 0.584953 1.3:-74220477 MS.gene75018:intron
TCAAGTCGACATATTTGCCA+GGG 0.585073 1.3:+74220202 None:intergenic
ATACGAGATGTTGAATCCAA+TGG 0.586954 1.3:+74220435 None:intergenic
CAGTGAAGACTTCTGCCACA+TGG 0.590023 1.3:+74220229 None:intergenic
ATTCGCAAATACCTTGATAC+CGG 0.592050 1.3:+74221594 None:intergenic
CGGTTAAGAAGGTAAGCATA+GGG 0.593834 1.3:+74223096 None:intergenic
TTGGAGGTTGCACAACATAT+GGG 0.594665 1.3:-74222841 MS.gene75018:CDS
ATTTGCATACTTGAGTAAAG+CGG 0.595796 1.3:+74220936 None:intergenic
TTTGGATAGAGATGGACGGA+GGG 0.596872 1.3:+74223173 None:intergenic
AGCATCCAAGTGAGCAAAGG+TGG 0.598239 1.3:+74220623 None:intergenic
TGTTGTGAGAACTATTGCTA+TGG 0.599192 1.3:-74222812 MS.gene75018:CDS
ATTTGGATAGAGATGGACGG+AGG 0.599909 1.3:+74223172 None:intergenic
TCGGGTTCGTTCTCCAACAC+CGG 0.602823 1.3:+74221247 None:intergenic
ACTTATTAACAATGTCGCAA+AGG 0.603139 1.3:-74221400 MS.gene75018:CDS
AATTCCATTCAGGTTCCCGT+TGG 0.605383 1.3:-74221867 MS.gene75018:intron
CCACGGAAGGAGTTGTTAGA+GGG 0.608178 1.3:-74222786 MS.gene75018:CDS
TCAGGAACTTTCTTAGCCGG+AGG 0.611341 1.3:+74223018 None:intergenic
GAACAACAAATTCTTGTGAC+CGG 0.612009 1.3:-74221613 MS.gene75018:CDS
TCCAAGAGTACACCTGCCAA+CGG 0.615971 1.3:+74221851 None:intergenic
CCAAGATCAGTAGACAATGT+TGG 0.620434 1.3:+74220747 None:intergenic
ACAAGTATTTACACTGATAG+GGG 0.621699 1.3:+74222741 None:intergenic
CATCTTGTCCTTCAGCATCA+CGG 0.623861 1.3:+74220984 None:intergenic
CGGAAGGAGTTGTTAGAGGG+TGG 0.625071 1.3:-74222783 MS.gene75018:CDS
ACATTGTCTACTGATCTTGG+AGG 0.626628 1.3:-74220744 MS.gene75018:CDS
GTGGATGTGAGATTCGAAGA+AGG 0.629837 1.3:-74222919 MS.gene75018:CDS
CTAATGCAGGGTGTGTTGGA+TGG 0.633559 1.3:-74219667 MS.gene75018:intron
AGAGATTCTGGATGTTGAGG+TGG 0.635525 1.3:+74223140 None:intergenic
ATTGCTATGGATGCCACGGA+AGG 0.637249 1.3:-74222799 MS.gene75018:CDS
CAAGTCGACATATTTGCCAG+GGG 0.638676 1.3:+74220203 None:intergenic
GTTGCACAACATATGGGTGA+AGG 0.642855 1.3:-74222835 MS.gene75018:CDS
CTCCTTGCACCATACCAAAG+AGG 0.642909 1.3:-74221480 MS.gene75018:CDS
GAACATTTCCGTGATGCTGA+AGG 0.644056 1.3:-74220992 MS.gene75018:CDS
TGTAGCATCCAAGTGAGCAA+AGG 0.644891 1.3:+74220620 None:intergenic
GGGTGGCGTGTTCTCAACAC+CGG 0.644892 1.3:-74222766 MS.gene75018:CDS
TTAGCCGGAGGAGTCTGAGG+AGG 0.645635 1.3:+74223030 None:intergenic
GGATAGAGATGGACGGAGGG+AGG 0.645699 1.3:+74223176 None:intergenic
AAAGGCAGAGAAGATTGCTA+AGG 0.647562 1.3:-74219581 MS.gene75018:CDS
TAATCCAGTAAGACCAACAC+GGG 0.647834 1.3:+74221024 None:intergenic
GTTGGAGAACGAACCCGAGA+GGG 0.654723 1.3:-74221242 MS.gene75018:CDS
ATGATTTGGATAGAGATGGA+CGG 0.656779 1.3:+74223169 None:intergenic
TACTTGTTGTACACCTCGAG+CGG 0.660570 1.3:+74220374 None:intergenic
CTGTAGCATACTCGGTAACA+CGG 0.661294 1.3:+74223076 None:intergenic
TCGAGCGCAGTAAGAATCGG+AGG 0.661465 1.3:+74222892 None:intergenic
TATTGATGAAGTCATTGCAA+AGG 0.663663 1.3:-74219599 MS.gene75018:CDS
GAAGATTGCTAAGGAAAATG+CGG 0.670742 1.3:-74219572 MS.gene75018:CDS
CTTGCACCATACCAAAGAGG+AGG 0.675495 1.3:-74221477 MS.gene75018:CDS
CCGGCTAAGAAAGTTCCTGA+CGG 0.676215 1.3:-74223015 MS.gene75018:CDS
GAGCACTACGAAACCGCTCG+AGG 0.679828 1.3:-74220387 MS.gene75018:CDS
CTTAAGTCAGCCCTTCCATG+TGG 0.684956 1.3:-74220244 MS.gene75018:CDS
GCTAAGAAAGTTCCTGACGG+TGG 0.702490 1.3:-74223012 MS.gene75018:CDS
TGTTGGAGAACGAACCCGAG+AGG 0.706147 1.3:-74221243 MS.gene75018:CDS
TACCGAGTATGCTACAGCCG+CGG 0.717503 1.3:-74223070 MS.gene75018:CDS
TTAATCCAGTAAGACCAACA+CGG 0.720007 1.3:+74221023 None:intergenic
ACACGGGCACGAGCACCAGG+GGG 0.727891 1.3:+74221040 None:intergenic
GTAATTGTAGGCCAACTCAG+AGG 0.729723 1.3:-74220814 MS.gene75018:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAACTAAATAATTTGATT+TGG - chr1.3:74222272-74222291 MS.gene75018:intron 10.0%
!!! ATATTTTTTAACTAAAATAC+CGG + chr1.3:74222962-74222981 None:intergenic 10.0%
!! AAAACAAGAAACTTAATTAA+TGG + chr1.3:74220552-74220571 None:intergenic 15.0%
!! ATTATAACTCTCATATTAAA+AGG + chr1.3:74221923-74221942 None:intergenic 15.0%
!! TTTCTATTATGAAGAATATT+AGG - chr1.3:74220490-74220509 MS.gene75018:intron 15.0%
!!! GTTTAAATTAAGGTTTTTAT+AGG - chr1.3:74222932-74222951 MS.gene75018:CDS 15.0%
!!! TAATTAAGTTTCTTGTTTTA+TGG - chr1.3:74220553-74220572 MS.gene75018:intron 15.0%
!! ACCAAAAATATCATTACAAT+TGG + chr1.3:74222245-74222264 None:intergenic 20.0%
!! GTAACAAATAAAACATACAA+TGG - chr1.3:74220246-74220265 MS.gene75018:CDS 20.0%
!! TGAAAAAAATCATGTAAGAT+TGG + chr1.3:74221266-74221285 None:intergenic 20.0%
!! TTTATCAAAGTTCTTAACTA+TGG - chr1.3:74221658-74221677 MS.gene75018:CDS 20.0%
!!! AATGAAAAGTATAAACTATG+TGG + chr1.3:74220820-74220839 None:intergenic 20.0%
!!! ATGAAAAGTATAAACTATGT+GGG + chr1.3:74220819-74220838 None:intergenic 20.0%
!!! TTACATGATTTTTTTCATAC+AGG - chr1.3:74221269-74221288 MS.gene75018:intron 20.0%
! AAAAACATTGTTAGAGCAAA+TGG + chr1.3:74221032-74221051 None:intergenic 25.0%
! AACAAGTATTTACACTGATA+GGG + chr1.3:74220043-74220062 None:intergenic 25.0%
! AAGATTACAGATGAATTTAC+TGG - chr1.3:74219795-74219814 MS.gene75018:intron 25.0%
! AATACTCGAAGCTTATTATA+AGG - chr1.3:74222854-74222873 MS.gene75018:CDS 25.0%
! ATACTCGAAGCTTATTATAA+GGG - chr1.3:74222855-74222874 MS.gene75018:CDS 25.0%
! ATATAGATAGTGATTAGTGA+AGG + chr1.3:74222806-74222825 None:intergenic 25.0%
! ATTAGTTCATAGAGAAAATC+CGG + chr1.3:74223098-74223117 None:intergenic 25.0%
! GAAGTAATTTAATCAGTGAA+TGG + chr1.3:74220389-74220408 None:intergenic 25.0%
! TATTGAAAAGAAAATTCCCA+AGG + chr1.3:74222838-74222857 None:intergenic 25.0%
! TGTTTATATACACTTCTTTC+TGG - chr1.3:74222901-74222920 MS.gene75018:CDS 25.0%
!! ATGTTTTTCTATCAATTCCA+TGG - chr1.3:74221044-74221063 MS.gene75018:CDS 25.0%
!! ATTTCTTCAATCTAAGATGA+TGG + chr1.3:74220129-74220148 None:intergenic 25.0%
!! GCCAATTGTAATGATATTTT+TGG - chr1.3:74222241-74222260 MS.gene75018:intron 25.0%
!! TAAGGTTTTTATAGGAAAAC+CGG - chr1.3:74222940-74222959 MS.gene75018:CDS 25.0%
!! TGAAAAGTATAAACTATGTG+GGG + chr1.3:74220818-74220837 None:intergenic 25.0%
!! TTATTTGTTACAAACACGAA+AGG + chr1.3:74220237-74220256 None:intergenic 25.0%
!!! CAAGATATCATTGCTATTTT+GGG - chr1.3:74222450-74222469 MS.gene75018:intron 25.0%
!!! CATTTCATTTTTTCTACTAG+TGG - chr1.3:74222692-74222711 MS.gene75018:intron 25.0%
!!! GGAAGTGTTTGTTTAAATTA+AGG - chr1.3:74222922-74222941 MS.gene75018:CDS 25.0%
!!! TCAAGATATCATTGCTATTT+TGG - chr1.3:74222449-74222468 MS.gene75018:intron 25.0%
AAAGAAAATTCCCAAGGAAT+AGG + chr1.3:74222832-74222851 None:intergenic 30.0%
ACAAGTATTTACACTGATAG+GGG + chr1.3:74220042-74220061 None:intergenic 30.0%
ACAGATGAATTTACTGGTAA+AGG - chr1.3:74219801-74219820 MS.gene75018:intron 30.0%
ACTTATTAACAATGTCGCAA+AGG - chr1.3:74221380-74221399 MS.gene75018:intron 30.0%
AGAAACCACCTGATAATAAA+TGG + chr1.3:74221504-74221523 None:intergenic 30.0%
AGGAAAAACTGTGCTTATTA+TGG - chr1.3:74221356-74221375 MS.gene75018:intron 30.0%
ATAATGCCTGATGTAATTGT+AGG - chr1.3:74221954-74221973 MS.gene75018:intron 30.0%
ATCTATATGAACCTATTCCT+TGG - chr1.3:74222818-74222837 MS.gene75018:CDS 30.0%
ATGAATAGGCAAAAAATGCT+CGG + chr1.3:74221114-74221133 None:intergenic 30.0%
ATTTGCATACTTGAGTAAAG+CGG + chr1.3:74221847-74221866 None:intergenic 30.0%
CTCAAGTATGCAAATTATCT+AGG - chr1.3:74221852-74221871 MS.gene75018:CDS 30.0%
GAACAAGTATTTACACTGAT+AGG + chr1.3:74220044-74220063 None:intergenic 30.0%
GAGTGTTTCCATTTATTATC+AGG - chr1.3:74221493-74221512 MS.gene75018:intron 30.0%
TAAGTTCCTGTATGATCATA+AGG + chr1.3:74222660-74222679 None:intergenic 30.0%
TATAGAGAAATGATTGAGAG+TGG - chr1.3:74221571-74221590 MS.gene75018:intron 30.0%
TATTGATGAAGTCATTGCAA+AGG - chr1.3:74223181-74223200 MS.gene75018:CDS 30.0%
TCTATATGAACCTATTCCTT+GGG - chr1.3:74222819-74222838 MS.gene75018:CDS 30.0%
TGATCATACAGGAACTTATT+TGG - chr1.3:74222662-74222681 MS.gene75018:intron 30.0%
TGTTTCCATTTATTATCAGG+TGG - chr1.3:74221496-74221515 MS.gene75018:intron 30.0%
TTTCTCTATGAACTAATGCA+GGG - chr1.3:74223101-74223120 MS.gene75018:CDS 30.0%
! AGAGAATTGTACTAGTTTCA+AGG - chr1.3:74222602-74222621 MS.gene75018:intron 30.0%
! ATGAGTTGAAAAACATTCCA+TGG + chr1.3:74221064-74221083 None:intergenic 30.0%
! GATGATGGTGATATATAGAT+TGG + chr1.3:74220114-74220133 None:intergenic 30.0%
! TATGCTTTCACCACTTATTT+TGG - chr1.3:74222365-74222384 MS.gene75018:intron 30.0%
! TCTTAACTATGGTTGTTTCA+TGG - chr1.3:74221669-74221688 MS.gene75018:CDS 30.0%
! TGGACTGAAAAAAGATTTTG+AGG + chr1.3:74221012-74221031 None:intergenic 30.0%
! TGTAAAATGCTTGTTCTGAA+AGG + chr1.3:74223151-74223170 None:intergenic 30.0%
! TTCAGAACAAGCATTTTACA+TGG - chr1.3:74223151-74223170 MS.gene75018:CDS 30.0%
! TTTTCTCTATGAACTAATGC+AGG - chr1.3:74223100-74223119 MS.gene75018:CDS 30.0%
!! ATGCTTTCACCACTTATTTT+GGG - chr1.3:74222366-74222385 MS.gene75018:intron 30.0%
!!! TATCATTGCTATTTTGGGAA+TGG - chr1.3:74222455-74222474 MS.gene75018:intron 30.0%
AAATCCGGTCAAATTGTTTG+TGG + chr1.3:74223083-74223102 None:intergenic 35.0%
AAGCAACTTCCAAACAAATC+TGG + chr1.3:74222773-74222792 None:intergenic 35.0%
AATGCTTGTGAATTCCATTC+AGG - chr1.3:74220903-74220922 MS.gene75018:intron 35.0%
AATTCGCCTTTATGATCGAT+AGG + chr1.3:74220979-74220998 None:intergenic 35.0%
ATACGAGATGTTGAATCCAA+TGG + chr1.3:74222348-74222367 None:intergenic 35.0%
ATTCGCAAATACCTTGATAC+CGG + chr1.3:74221189-74221208 None:intergenic 35.0%
CAATCCACAAACAATTTGAC+CGG - chr1.3:74223076-74223095 MS.gene75018:CDS 35.0%
GAACAACAAATTCTTGTGAC+CGG - chr1.3:74221167-74221186 MS.gene75018:intron 35.0%
GAAGATTGCTAAGGAAAATG+CGG - chr1.3:74223208-74223227 MS.gene75018:CDS 35.0%
GGACGTATCATGAATGTTAT+TGG - chr1.3:74220949-74220968 MS.gene75018:CDS 35.0%
GTATGATCATAAGGAAAGCA+TGG + chr1.3:74222651-74222670 None:intergenic 35.0%
GTTGCTTGTTCAACAAAAGT+AGG + chr1.3:74221146-74221165 None:intergenic 35.0%
TGATTGAGAAGAAGAGATTC+TGG + chr1.3:74219655-74219674 None:intergenic 35.0%
TGCTTTCCTTATGATCATAC+AGG - chr1.3:74222651-74222670 MS.gene75018:intron 35.0%
TGGATTGCATAGAAACAAAC+TGG + chr1.3:74223063-74223082 None:intergenic 35.0%
TGTTGTGAGAACTATTGCTA+TGG - chr1.3:74219968-74219987 MS.gene75018:intron 35.0%
TTAATCCAGTAAGACCAACA+CGG + chr1.3:74221760-74221779 None:intergenic 35.0%
TTATGGTGAAGTTCTTTGCA+AGG - chr1.3:74220570-74220589 MS.gene75018:intron 35.0%
! AGCAAATGTGCTCTTGTTTA+TGG - chr1.3:74221704-74221723 MS.gene75018:intron 35.0%
! ATGATTTGGATAGAGATGGA+CGG + chr1.3:74219614-74219633 None:intergenic 35.0%
! GAACAAGCATTTTACATGGT+TGG - chr1.3:74223155-74223174 MS.gene75018:CDS 35.0%
! GCTCAATCTCAACTTTCTTT+TGG - chr1.3:74220765-74220784 MS.gene75018:CDS 35.0%
!! GGTCACAAGAATTTGTTGTT+CGG + chr1.3:74221168-74221187 None:intergenic 35.0%
AAAGGCAGAGAAGATTGCTA+AGG - chr1.3:74223199-74223218 MS.gene75018:CDS 40.0%
AACATAGATAGCTTGGACAG+AGG + chr1.3:74222103-74222122 None:intergenic 40.0%
AACTATTGCTATGGATGCCA+CGG - chr1.3:74219977-74219996 MS.gene75018:intron 40.0%
AACTTCCAAACAAATCTGGC+AGG + chr1.3:74222769-74222788 None:intergenic 40.0%
AATTCTTGTGACCGGTATCA+AGG - chr1.3:74221175-74221194 MS.gene75018:intron 40.0%
ACATTGTCTACTGATCTTGG+AGG - chr1.3:74222036-74222055 MS.gene75018:intron 40.0%
ACGGTTAAGAAGGTAAGCAT+AGG + chr1.3:74219688-74219707 None:intergenic 40.0%
AGAAGAGATTCTGGATGTTG+AGG + chr1.3:74219646-74219665 None:intergenic 40.0%
AGAGGTAATTGAACCCTTCT+TGG + chr1.3:74222085-74222104 None:intergenic 40.0%
ATCCAATCTTTCCTCCTCTT+TGG + chr1.3:74221317-74221336 None:intergenic 40.0%
ATCTTTCCTCCTCTTTGGTA+TGG + chr1.3:74221312-74221331 None:intergenic 40.0%
CCAACATTGTCTACTGATCT+TGG - chr1.3:74222033-74222052 MS.gene75018:intron 40.0%
CCAAGATCAGTAGACAATGT+TGG + chr1.3:74222036-74222055 None:intergenic 40.0%
CGGTTAAGAAGGTAAGCATA+GGG + chr1.3:74219687-74219706 None:intergenic 40.0%
CGTATTACAACCACCAAGAA+GGG - chr1.3:74222069-74222088 MS.gene75018:intron 40.0%
GGAAAGATTGGATTGTTTGG+TGG - chr1.3:74221324-74221343 MS.gene75018:intron 40.0%
GGAGAACCTATCGATCATAA+AGG - chr1.3:74220970-74220989 MS.gene75018:CDS 40.0%
GGAGGAAAGATTGGATTGTT+TGG - chr1.3:74221321-74221340 MS.gene75018:intron 40.0%
GTAGGAGCTTCTCTATGAAT+AGG + chr1.3:74221128-74221147 None:intergenic 40.0%
TAATCCAGTAAGACCAACAC+GGG + chr1.3:74221759-74221778 None:intergenic 40.0%
TACAACAGTGTTGTCAAGAC+AGG - chr1.3:74222179-74222198 MS.gene75018:intron 40.0%
TACCAAAGAGGAGGAAAGAT+TGG - chr1.3:74221312-74221331 MS.gene75018:intron 40.0%
TATACAAGTCGTTACCCTCT+CGG + chr1.3:74221555-74221574 None:intergenic 40.0%
TCAAGTCGACATATTTGCCA+GGG + chr1.3:74222581-74222600 None:intergenic 40.0%
TCATTCTACCAGATTGGTGT+TGG - chr1.3:74219920-74219939 MS.gene75018:intron 40.0%
TCTCGATCATTCTACCAGAT+TGG - chr1.3:74219914-74219933 MS.gene75018:intron 40.0%
TGAACATAGATCTCTGAGCT+TGG - chr1.3:74222303-74222322 MS.gene75018:intron 40.0%
TGCTCATCACCCAAAATAAG+TGG + chr1.3:74222378-74222397 None:intergenic 40.0%
TTCAAGTCGACATATTTGCC+AGG + chr1.3:74222582-74222601 None:intergenic 40.0%
TTGGAGGTTGCACAACATAT+GGG - chr1.3:74219939-74219958 MS.gene75018:intron 40.0%
! AATTTTACGAGCACGTGCAA+CGG + chr1.3:74222508-74222527 None:intergenic 40.0%
! AGGGATGATTTGGATAGAGA+TGG + chr1.3:74219618-74219637 None:intergenic 40.0%
! AGTTGGCCTACAATTACATC+AGG + chr1.3:74221963-74221982 None:intergenic 40.0%
! CAAGCATTTTACATGGTTGG+TGG - chr1.3:74223158-74223177 MS.gene75018:CDS 40.0%
! TTTACTGGTAAAGGTGCGAT+TGG - chr1.3:74219810-74219829 MS.gene75018:intron 40.0%
AACAATGTCGCAAAGGCTCA+TGG - chr1.3:74221387-74221406 MS.gene75018:intron 45.0%
AAGACTTCTGCCACATGGAA+GGG + chr1.3:74222549-74222568 None:intergenic 45.0%
ACTCGGTAACACGGTTAAGA+AGG + chr1.3:74219698-74219717 None:intergenic 45.0%
AGAGATTCTGGATGTTGAGG+TGG + chr1.3:74219643-74219662 None:intergenic 45.0%
ATACAAGTCGTTACCCTCTC+GGG + chr1.3:74221554-74221573 None:intergenic 45.0%
ATTTACACTGATAGGGGAGC+CGG + chr1.3:74220036-74220055 None:intergenic 45.0%
ATTTGGATAGAGATGGACGG+AGG + chr1.3:74219611-74219630 None:intergenic 45.0%
CAAGTCGACATATTTGCCAG+GGG + chr1.3:74222580-74222599 None:intergenic 45.0%
CAGCAGGAACATAGATAGCT+TGG + chr1.3:74222110-74222129 None:intergenic 45.0%
CATCTTGTCCTTCAGCATCA+CGG + chr1.3:74221799-74221818 None:intergenic 45.0%
CTATCCTGCTGTTGATCCAT+TGG - chr1.3:74222329-74222348 MS.gene75018:intron 45.0%
CTGTAGCATACTCGGTAACA+CGG + chr1.3:74219707-74219726 None:intergenic 45.0%
GAACATTTCCGTGATGCTGA+AGG - chr1.3:74221788-74221807 MS.gene75018:intron 45.0%
GAATCCAATGGATCAACAGC+AGG + chr1.3:74222336-74222355 None:intergenic 45.0%
GAGAGTGGAGTCATTAAGCT+TGG - chr1.3:74221586-74221605 MS.gene75018:intron 45.0%
GCGTATTACAACCACCAAGA+AGG - chr1.3:74222068-74222087 MS.gene75018:intron 45.0%
GGTAATTGAACCCTTCTTGG+TGG + chr1.3:74222082-74222101 None:intergenic 45.0%
GTAATTGTAGGCCAACTCAG+AGG - chr1.3:74221966-74221985 MS.gene75018:intron 45.0%
GTGGATGTGAGATTCGAAGA+AGG - chr1.3:74219861-74219880 MS.gene75018:intron 45.0%
GTTGCACAACATATGGGTGA+AGG - chr1.3:74219945-74219964 MS.gene75018:intron 45.0%
GTTGGAGGTTGCACAACATA+TGG - chr1.3:74219938-74219957 MS.gene75018:intron 45.0%
TGAACTAATGCAGGGTGTGT+TGG - chr1.3:74223109-74223128 MS.gene75018:CDS 45.0%
TGTAGCATCCAAGTGAGCAA+AGG + chr1.3:74222163-74222182 None:intergenic 45.0%
TTTGGATAGAGATGGACGGA+GGG + chr1.3:74219610-74219629 None:intergenic 45.0%
! AATTCCATTCAGGTTCCCGT+TGG - chr1.3:74220913-74220932 MS.gene75018:intron 45.0%
! CATTAAGCTTGGTGATCAGC+AGG - chr1.3:74221597-74221616 MS.gene75018:intron 45.0%
! CATTGCCTGCCAGATTTGTT+TGG - chr1.3:74222761-74222780 MS.gene75018:CDS 45.0%
! GTGAAGTGTCTGTGCTACAT+TGG - chr1.3:74220700-74220719 MS.gene75018:CDS 45.0%
!! ATTGGATTGTTTGGTGGTGC+TGG - chr1.3:74221330-74221349 MS.gene75018:intron 45.0%
!! GGTTGATAACCAACAGCAGA+TGG + chr1.3:74222015-74222034 None:intergenic 45.0%
!! TACTTGTTGTACACCTCGAG+CGG + chr1.3:74222409-74222428 None:intergenic 45.0%
!! TTCTACCAGATTGGTGTTGG+AGG - chr1.3:74219923-74219942 MS.gene75018:intron 45.0%
!!! GGTGGTTTCTCTGTTTTTGC+CGG - chr1.3:74221514-74221533 MS.gene75018:intron 45.0%
!!! TTCTCTGTTTTTGCCGGTGT+TGG - chr1.3:74221520-74221539 MS.gene75018:intron 45.0%
AAGAAAGTTCCTGACGGTGG+TGG - chr1.3:74219771-74219790 MS.gene75018:intron 50.0%
AAGTGAGCAAAGGTGGTAGC+TGG + chr1.3:74222153-74222172 None:intergenic 50.0%
ACCTCGAGCGCAGTAAGAAT+CGG + chr1.3:74219894-74219913 None:intergenic 50.0%
AGATGGAATGCGACCAAGCA+AGG + chr1.3:74221998-74222017 None:intergenic 50.0%
AGCATCCAAGTGAGCAAAGG+TGG + chr1.3:74222160-74222179 None:intergenic 50.0%
AGCTACCACCTTTGCTCACT+TGG - chr1.3:74222152-74222171 MS.gene75018:intron 50.0%
ATTGCTATGGATGCCACGGA+AGG - chr1.3:74219981-74220000 MS.gene75018:intron 50.0%
CAGTGAAGACTTCTGCCACA+TGG + chr1.3:74222554-74222573 None:intergenic 50.0%
CATGTGGCAGAAGTCTTCAC+TGG - chr1.3:74222552-74222571 MS.gene75018:intron 50.0%
CCACGGAAGGAGTTGTTAGA+GGG - chr1.3:74219994-74220013 MS.gene75018:intron 50.0%
CCGGCTAAGAAAGTTCCTGA+CGG - chr1.3:74219765-74219784 MS.gene75018:intron 50.0%
CCGTCAGGAACTTTCTTAGC+CGG + chr1.3:74219768-74219787 None:intergenic 50.0%
CTAATGCAGGGTGTGTTGGA+TGG - chr1.3:74223113-74223132 MS.gene75018:CDS 50.0%
CTCCTCTTTGGTATGGTGCA+AGG + chr1.3:74221305-74221324 None:intergenic 50.0%
CTCCTTGCACCATACCAAAG+AGG - chr1.3:74221300-74221319 MS.gene75018:intron 50.0%
CTTAAGTCAGCCCTTCCATG+TGG - chr1.3:74222536-74222555 MS.gene75018:intron 50.0%
CTTGCACCATACCAAAGAGG+AGG - chr1.3:74221303-74221322 MS.gene75018:intron 50.0%
GAAGACTTCTGCCACATGGA+AGG + chr1.3:74222550-74222569 None:intergenic 50.0%
GCTAAGAAAGTTCCTGACGG+TGG - chr1.3:74219768-74219787 MS.gene75018:intron 50.0%
GGACAGGTTTGTCAGGTGAT+TGG - chr1.3:74219831-74219850 MS.gene75018:intron 50.0%
GGATCTGTCAAGTCATCAGC+AGG + chr1.3:74222126-74222145 None:intergenic 50.0%
GTAATCTTTCCACCACCGTC+AGG + chr1.3:74219783-74219802 None:intergenic 50.0%
TCAGGAACTTTCTTAGCCGG+AGG + chr1.3:74219765-74219784 None:intergenic 50.0%
TCTGGATGTTGAGGTGGTGA+GGG + chr1.3:74219637-74219656 None:intergenic 50.0%
TGAGGTGGTGAGGGATGATT+TGG + chr1.3:74219628-74219647 None:intergenic 50.0%
TGCAACCTCCAACACCAATC+TGG + chr1.3:74219931-74219950 None:intergenic 50.0%
TGCGATTGGACAGGTTTGTC+AGG - chr1.3:74219824-74219843 MS.gene75018:intron 50.0%
TTCTGGATGTTGAGGTGGTG+AGG + chr1.3:74219638-74219657 None:intergenic 50.0%
! TCCAAGAGTACACCTGCCAA+CGG + chr1.3:74220932-74220951 None:intergenic 50.0%
! TGGTAAAGGTGCGATTGGAC+AGG - chr1.3:74219815-74219834 MS.gene75018:intron 50.0%
!! TTGTCAGGTGATTGGTGCTG+TGG - chr1.3:74219839-74219858 MS.gene75018:intron 50.0%
!! TTGTTTGGTGGTGCTGGTGT+AGG - chr1.3:74221336-74221355 MS.gene75018:intron 50.0%
CAAGGCAGACACCTCTGAGT+TGG + chr1.3:74221980-74221999 None:intergenic 55.0%
CCCTCTAACAACTCCTTCCG+TGG + chr1.3:74219997-74220016 None:intergenic 55.0%
CGGAAGGAGTTGTTAGAGGG+TGG - chr1.3:74219997-74220016 MS.gene75018:intron 55.0%
GCCACGGAAGGAGTTGTTAG+AGG - chr1.3:74219993-74220012 MS.gene75018:intron 55.0%
GGTCGCATTCCATCTGCTGT+TGG - chr1.3:74222003-74222022 MS.gene75018:intron 55.0%
GTTGGAGAACGAACCCGAGA+GGG - chr1.3:74221538-74221557 MS.gene75018:intron 55.0%
TACCGAGTATGCTACAGCCG+CGG - chr1.3:74219710-74219729 MS.gene75018:intron 55.0%
TCCGATTCTTACTGCGCTCG+AGG - chr1.3:74219890-74219909 MS.gene75018:intron 55.0%
TCGAGCGCAGTAAGAATCGG+AGG + chr1.3:74219891-74219910 None:intergenic 55.0%
TCGGGTTCGTTCTCCAACAC+CGG + chr1.3:74221536-74221555 None:intergenic 55.0%
TGTTGGAGAACGAACCCGAG+AGG - chr1.3:74221537-74221556 MS.gene75018:intron 55.0%
TTCTTAGCCGGAGGAGTCTG+AGG + chr1.3:74219756-74219775 None:intergenic 55.0%
! CCAAGAGTACACCTGCCAAC+GGG + chr1.3:74220931-74220950 None:intergenic 55.0%
!! TCAGAGGTGTCTGCCTTGCT+TGG - chr1.3:74221982-74222001 MS.gene75018:intron 55.0%
!! TCAGGTGATTGGTGCTGTGG+TGG - chr1.3:74219842-74219861 MS.gene75018:intron 55.0%
AGCCGCGGCTGTAGCATACT+CGG + chr1.3:74219715-74219734 None:intergenic 60.0%
CCCGTTGGCAGGTGTACTCT+TGG - chr1.3:74220928-74220947 MS.gene75018:intron 60.0%
CCTGCCAACGGGAACCTGAA+TGG + chr1.3:74220920-74220939 None:intergenic 60.0%
GAAGTCTTCACTGGTGCCCC+TGG - chr1.3:74222561-74222580 MS.gene75018:intron 60.0%
GAGCACTACGAAACCGCTCG+AGG - chr1.3:74222393-74222412 MS.gene75018:intron 60.0%
GCAAAGGTGGTAGCTGGAGC+AGG + chr1.3:74222147-74222166 None:intergenic 60.0%
GGATAGAGATGGACGGAGGG+AGG + chr1.3:74219607-74219626 None:intergenic 60.0%
GGGTGGCGTGTTCTCAACAC+CGG - chr1.3:74220014-74220033 MS.gene75018:intron 60.0%
GGTCAAATGAACGAGCCCCC+TGG - chr1.3:74221725-74221744 MS.gene75018:intron 60.0%
TTAGCCGGAGGAGTCTGAGG+AGG + chr1.3:74219753-74219772 None:intergenic 60.0%
! CCATTCAGGTTCCCGTTGGC+AGG - chr1.3:74220917-74220936 MS.gene75018:intron 60.0%
!! CGTGCCCGTGTTGGTCTTAC+TGG - chr1.3:74221752-74221771 MS.gene75018:intron 60.0%
AACACGGGCACGAGCACCAG+GGG + chr1.3:74221744-74221763 None:intergenic 65.0%
CAACACGGGCACGAGCACCA+GGG + chr1.3:74221745-74221764 None:intergenic 65.0%
CGCTCCTCCTCAGACTCCTC+CGG - chr1.3:74219746-74219765 MS.gene75018:intron 65.0%
CGGAGGAGTCTGAGGAGGAG+CGG + chr1.3:74219748-74219767 None:intergenic 65.0%
GGAGGAGTCTGAGGAGGAGC+GGG + chr1.3:74219747-74219766 None:intergenic 65.0%
ACACGGGCACGAGCACCAGG+GGG + chr1.3:74221743-74221762 None:intergenic 70.0%
CCAACACGGGCACGAGCACC+AGG + chr1.3:74221746-74221765 None:intergenic 70.0%
CCTGGTGCTCGTGCCCGTGT+TGG - chr1.3:74221743-74221762 MS.gene75018:intron 70.0%
AGCGGGAGCTGCAGCAGCCG+CGG + chr1.3:74219730-74219749 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 74219567 74223235 74219567 ID=MS.gene75018
chr1.3 mRNA 74219567 74223235 74219567 ID=MS.gene75018.t1;Parent=MS.gene75018
chr1.3 exon 74222753 74223235 74222753 ID=MS.gene75018.t1.exon1;Parent=MS.gene75018.t1
chr1.3 CDS 74222753 74223235 74222753 ID=cds.MS.gene75018.t1;Parent=MS.gene75018.t1
chr1.3 exon 74221802 74221877 74221802 ID=MS.gene75018.t1.exon2;Parent=MS.gene75018.t1
chr1.3 CDS 74221802 74221877 74221802 ID=cds.MS.gene75018.t1;Parent=MS.gene75018.t1
chr1.3 exon 74221606 74221694 74221606 ID=MS.gene75018.t1.exon3;Parent=MS.gene75018.t1
chr1.3 CDS 74221606 74221694 74221606 ID=cds.MS.gene75018.t1;Parent=MS.gene75018.t1
chr1.3 exon 74221394 74221511 74221394 ID=MS.gene75018.t1.exon4;Parent=MS.gene75018.t1
chr1.3 CDS 74221394 74221511 74221394 ID=cds.MS.gene75018.t1;Parent=MS.gene75018.t1
chr1.3 exon 74221184 74221287 74221184 ID=MS.gene75018.t1.exon5;Parent=MS.gene75018.t1
chr1.3 CDS 74221184 74221287 74221184 ID=cds.MS.gene75018.t1;Parent=MS.gene75018.t1
chr1.3 exon 74220946 74221104 74220946 ID=MS.gene75018.t1.exon6;Parent=MS.gene75018.t1
chr1.3 CDS 74220946 74221104 74220946 ID=cds.MS.gene75018.t1;Parent=MS.gene75018.t1
chr1.3 exon 74220602 74220826 74220602 ID=MS.gene75018.t1.exon7;Parent=MS.gene75018.t1
chr1.3 CDS 74220602 74220826 74220602 ID=cds.MS.gene75018.t1;Parent=MS.gene75018.t1
chr1.3 exon 74220179 74220490 74220179 ID=MS.gene75018.t1.exon8;Parent=MS.gene75018.t1
chr1.3 CDS 74220179 74220490 74220179 ID=cds.MS.gene75018.t1;Parent=MS.gene75018.t1
chr1.3 exon 74219567 74219680 74219567 ID=MS.gene75018.t1.exon9;Parent=MS.gene75018.t1
chr1.3 CDS 74219567 74219680 74219567 ID=cds.MS.gene75018.t1;Parent=MS.gene75018.t1
Gene Sequence

>MS.gene75018

ATGGCTTCACGGAGAATCGTTTCATCTTTGATACGTTCCTCCCTCCGTCCATCTCTATCCAAATCATCCCTCACCACCTCAACATCCAGAATCTCTTCTTCTCAATCACGTGCATCTCCCTATGCTTACCTTCTTAACCGTGTTACCGAGTATGCTACAGCCGCGGCTGCTGCAGCTCCCGCTCCTCCTCAGACTCCTCCGGCTAAGAAAGTTCCTGACGGTGGTGGAAAGATTACAGATGAATTTACTGGTAAAGGTGCGATTGGACAGGTTTGTCAGGTGATTGGTGCTGTGGTGGATGTGAGATTCGAAGAAGGTTTGCCTCCGATTCTTACTGCGCTCGAGGTTCTCGATCATTCTACCAGATTGGTGTTGGAGGTTGCACAACATATGGGTGAAGGTGTTGTGAGAACTATTGCTATGGATGCCACGGAAGGAGTTGTTAGAGGGTGGCGTGTTCTCAACACCGGCTCCCCTATCAGTGTAAATACTTGTTCACTTGCTGCAATTTATTCATATTTCTTTAGTTAAAAATGTCATTTTTCCAATCTATATATCACCATCATCTTAGATTGAAGAAATAGACACATTTTTACATTCAATCACTTATATTTTTTGTGTGTATATTTCAATATGTTTAATGTCTGTGTTAATGTTTCATGATCTTCCTTTCGTGTTTGTAACAAATAAAACATACAATGGCTTAAAAGTATCATATGTTTCAATTTCTATTTAGATTGAGATAAAAACAACTTTATATGTTGTTTTGTGTGAACATATATACATAACTTTTTTCTATAATGATCACAACATTCGTAACCATTCACTGATTAAATTACTTCATAGTGAAATATCAAAAAAAGTGTGTTTTCTTATCATTTTCAACACATTTTTCTATGTCGTTGTGTTTTCTTCTATCACATTTTCTATTATGAAGAATATTAGGTGATTTGATATAAATCAATATGAGTAATTTTTTATTCCATTAATTAAGTTTCTTGTTTTATGGTGAAGTTCTTTGCAAGGATATTGTTTTTGTTAGTTAGTCTATGAATTATACGACTATGAAACACTCACTTATAATAAGCAAATGAAAGTGTTAGTAAGTCTATCATATCATATATATCTTAAACGTGAAGTGTCTGTGCTACATTGGATTACGATCATATTGCTATTGTGAATGTGATCTAATCAATCTGCTCAATCTCAACTTTCTTTTGGACTTGCATTTTGCTGACATGAATTTAGCCCCACATAGTTTATACTTTTCATTTTGTGTCTCTCAGTATCATTGAATTTCTATATTTTCTTTCAAAAAGCGTTTAAGTATATACTAAATGCTTGTGAATTCCATTCAGGTTCCCGTTGGCAGGTGTACTCTTGGACGTATCATGAATGTTATTGGAGAACCTATCGATCATAAAGGCGAATTTAGTAAGAAACCTCAAAATCTTTTTTCAGTCCATTTGCTCTAACAATGTTTTTCTATCAATTCCATGGAATGTTTTTCAACTCATGATAAATTTTGTGAATTGCTTTAGAAACCGAGCATTTTTTGCCTATTCATAGAGAAGCTCCTACTTTTGTTGAACAAGCAACCGAACAACAAATTCTTGTGACCGGTATCAAGGTATTTGCGAATGCATCAATCTCATTTTATTAAATGTTGACGTCTGCAAATATCTAATGTCTTTTACCAATCTTACATGATTTTTTTCATACAGGTTGTTGATCTCCTTGCACCATACCAAAGAGGAGGAAAGATTGGATTGTTTGGTGGTGCTGGTGTAGGAAAAACTGTGCTTATTATGGAACTTATTAACAATGTCGCAAAGGCTCATGGTATATATATGTGCTAAGTAAACATACACTCAATTATTCTTGTTAAAATGCTCTTTAACATTTGTATATATACTATTGTATTTTGAGTGTTTCCATTTATTATCAGGTGGTTTCTCTGTTTTTGCCGGTGTTGGAGAACGAACCCGAGAGGGTAACGACTTGTATAGAGAAATGATTGAGAGTGGAGTCATTAAGCTTGGTGATCAGCAGGTGAACACAATGTTGTTCATGACTCACATTCTATTTATGTTTATCAAAGTTCTTAACTATGGTTGTTTCATGGATTCAGAGTGAAAGCAAATGTGCTCTTGTTTATGGTCAAATGAACGAGCCCCCTGGTGCTCGTGCCCGTGTTGGTCTTACTGGATTAACTGTTGCTGAACATTTCCGTGATGCTGAAGGACAAGATGTGCTTCTTTTCGTTGATAACATTTTCCGCTTTACTCAAGTATGCAAATTATCTAGGATAATCTATCTTCTATATATTTATCGATATTTTTGCTCATGTTCTCCTTTTAATATGAGAGTTATAATTGATCGACATTATAATGCCTGATGTAATTGTAGGCCAACTCAGAGGTGTCTGCCTTGCTTGGTCGCATTCCATCTGCTGTTGGTTATCAACCAACATTGTCTACTGATCTTGGAGGTCTTCAAGAGCGTATTACAACCACCAAGAAGGGTTCAATTACCTCTGTCCAAGCTATCTATGTTCCTGCTGATGACTTGACAGATCCTGCTCCAGCTACCACCTTTGCTCACTTGGATGCTACAACAGTGTTGTCAAGACAGGTTCGATCACTATGTTAATATTGATTAATTAAACTAAAGTGCCAATTGTAATGATATTTTTGGTTGTTATCATTAACTAAATAATTTGATTTGGATAAATATTGAACATAGATCTCTGAGCTTGGTATCTATCCTGCTGTTGATCCATTGGATTCAACATCTCGTATGCTTTCACCACTTATTTTGGGTGATGAGCACTACGAAACCGCTCGAGGTGTACAACAAGTACTTCAAAACTACAAGAATCTTCAAGATATCATTGCTATTTTGGGAATGGATGAGCTAAGTGAAGATGATAAATTGACCGTTGCACGTGCTCGTAAAATTCAACGATTCTTAAGTCAGCCCTTCCATGTGGCAGAAGTCTTCACTGGTGCCCCTGGCAAATATGTCGACTTGAAAGAGAATTGTACTAGTTTCAAGGTACTTTTTTCTTTACTTTTCTCTCCATGCTTTCCTTATGATCATACAGGAACTTATTTGGTTACTATCATTTCATTTTTTCTACTAGTGGTAGATTATCATCTTATGATATGCATTTTTAGTCTTTACTTTCAAAGCATTGCCTGCCAGATTTGTTTGGAAGTTGCTTATCTTTTGCTCCTTCACTAATCACTATCTATATGAACCTATTCCTTGGGAATTTTCTTTTCAATACTCGAAGCTTATTATAAGGGTTTAGAGTGTTTGTTTAAGCTAATGTTTATATACACTTCTTTCTGGAAGTGTTTGTTTAAATTAAGGTTTTTATAGGAAAACCGGTATTTTAGTTAAAAAATATAAAATAATCTGAAAATTATTTATTTGACTAACTTCTGAAAATAAATGTAATTTTTTTTACATGAGTTCACTTTAACTACCAGTTTGTTTCTATGCAATCCACAAACAATTTGACCGGATTTTCTCTATGAACTAATGCAGGGTGTGTTGGATGGCAAATACGATGACCTTTCAGAACAAGCATTTTACATGGTTGGTGGTATTGATGAAGTCATTGCAAAGGCAGAGAAGATTGCTAAGGAAAATGCGGCTTAA
Protein sequence

>MS.gene75018.t1

MASRRIVSSLIRSSLRPSLSKSSLTTSTSRISSSQSRASPYAYLLNRVTEYATAAAAAAPAPPQTPPAKKVPDGGGKITDEFTGKGAIGQVCQVIGAVVDVRFEEGLPPILTALEVLDHSTRLVLEVAQHMGEGVVRTIAMDATEGVVRGWRVLNTGSPISVPVGRCTLGRIMNVIGEPIDHKGEFKTEHFLPIHREAPTFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDQQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLSTDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPLILGDEHYETARGVQQVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVDLKENCTSFKGVLDGKYDDLSEQAFYMVGGIDEVIAKAEKIAKENAA