AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene029508

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029508.t1 MTR_1g108770 99.284 559 4 0 1 559 1 559 0.0 1134
MS.gene029508.t1 MTR_1g108765 93.023 559 36 3 1 559 1 556 0.0 1009
MS.gene029508.t1 MTR_7g021780 69.703 472 136 3 85 550 17 487 0.0 629
MS.gene029508.t1 MTR_4g451275 69.474 475 138 3 85 553 17 490 0.0 629
MS.gene029508.t1 MTR_3g035730 68.842 475 141 3 85 553 17 490 0.0 622
MS.gene029508.t1 MTR_0002s0650 68.817 465 136 4 89 547 21 482 0.0 615
MS.gene029508.t1 MTR_7g033765 68.904 447 132 3 85 525 17 462 0.0 585
MS.gene029508.t1 MTR_7g033755 61.247 449 106 4 107 550 1 386 4.47e-178 512
MS.gene029508.t1 MTR_2g066870 60.152 394 143 5 162 552 29 411 3.69e-158 458
MS.gene029508.t1 MTR_1829s0010 76.577 222 52 0 319 540 1 222 3.64e-119 355
MS.gene029508.t1 MTR_7g117920 65.248 282 91 3 85 360 17 297 1.08e-108 328
MS.gene029508.t1 MTR_6g055020 63.774 265 89 3 85 343 17 280 2.87e-97 297
MS.gene029508.t1 MTR_2g066860 57.927 164 53 5 1 162 2 151 8.24e-47 162
MS.gene029508.t1 MTR_1g076100 70.000 80 24 0 376 455 5 84 6.12e-32 118
MS.gene029508.t1 MTR_4g010980 47.015 134 65 2 86 213 15 148 1.84e-28 111
MS.gene029508.t1 MTR_1g112870 28.642 405 251 12 118 496 52 444 1.06e-27 117
MS.gene029508.t1 MTR_7g081010 28.713 404 251 13 118 496 51 442 1.24e-27 116
MS.gene029508.t1 MTR_4g005410 28.313 332 212 9 183 496 203 526 4.44e-26 113
MS.gene029508.t1 MTR_5g090750 76.786 56 13 0 459 514 21 76 9.31e-23 92.4
MS.gene029508.t1 MTR_0002s0550 24.104 502 310 17 88 556 29 492 7.56e-19 90.1
MS.gene029508.t1 MTR_0212s0040 25.253 297 201 4 153 437 90 377 2.55e-18 89.4
MS.gene029508.t1 MTR_2g009560 45.833 72 36 1 480 551 3 71 9.66e-14 67.4
MS.gene029508.t1 MTR_3g099550 73.333 45 12 0 101 145 10 54 1.06e-13 67.8
MS.gene029508.t1 MTR_3g065340 59.259 54 21 1 88 141 55 107 2.75e-13 67.8
MS.gene029508.t1 MTR_7g498250 70.833 48 12 2 1 48 1 46 7.03e-11 60.5
MS.gene029508.t1 MTR_7g498250 70.833 48 12 2 1 48 1 46 9.14e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029508.t1 AT5G08680 84.351 524 75 2 38 559 41 559 0.0 902
MS.gene029508.t1 AT5G08690 84.121 529 77 2 33 559 33 556 0.0 891
MS.gene029508.t1 AT5G08670 84.181 531 76 3 32 559 31 556 0.0 890
MS.gene029508.t1 ATCG00480 68.267 479 145 3 85 557 17 494 0.0 631
MS.gene029508.t1 AT1G20260 28.642 405 251 12 118 496 50 442 2.16e-28 119
MS.gene029508.t1 AT1G76030 28.822 399 248 11 118 492 50 436 4.62e-28 118
MS.gene029508.t1 AT4G38510 28.218 404 253 12 118 496 58 449 1.01e-27 117
MS.gene029508.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.01e-27 117
MS.gene029508.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.01e-27 117
MS.gene029508.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.01e-27 117
MS.gene029508.t1 AT4G38510 28.218 404 253 12 118 496 51 442 1.01e-27 117
MS.gene029508.t1 AT1G78900 27.635 351 223 10 211 544 229 565 3.23e-26 113
MS.gene029508.t1 AT1G78900 27.635 351 223 10 211 544 229 565 3.23e-26 113
MS.gene029508.t1 ATMG01190 25.667 300 202 4 150 437 87 377 2.53e-19 91.7
MS.gene029508.t1 AT2G07698 25.589 297 200 4 153 437 360 647 1.07e-18 90.5
MS.gene029508.t1 ATCG00120 24.651 430 271 14 101 513 54 447 6.74e-17 84.3

Find 154 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGATATCATTGCTATTT+TGG 0.086458 1.3:+74204510 MS.gene029508:CDS
TATGCTTTCACCACTTATTT+TGG 0.102924 1.3:+74204426 MS.gene029508:CDS
AGCAAATGTGCTCTTGTTTA+TGG 0.159877 1.3:+74203765 MS.gene029508:CDS
CGTGCCCGTGTTGGTCTTAC+TGG 0.164716 1.3:+74203813 MS.gene029508:CDS
GGACGTATCATGAATGTTAT+TGG 0.260657 1.3:+74203010 MS.gene029508:CDS
ATCCAATCTTTCCTCCTCTT+TGG 0.273825 1.3:-74203375 None:intergenic
AGCTACCACCTTTGCTCACT+TGG 0.316716 1.3:+74204213 MS.gene029508:CDS
AAGATTACAGATGAATTTAC+TGG 0.354465 1.3:+74201856 MS.gene029508:CDS
TGATTGAGAAGAAGAGATTC+TGG 0.357390 1.3:-74201713 None:intergenic
GGAGGAAAGATTGGATTGTT+TGG 0.361136 1.3:+74203382 MS.gene029508:CDS
AGAGGTAATTGAACCCTTCT+TGG 0.378135 1.3:-74204143 None:intergenic
CCAACACGGGCACGAGCACC+AGG 0.380050 1.3:-74203804 None:intergenic
ATTGGATTGTTTGGTGGTGC+TGG 0.384032 1.3:+74203391 MS.gene029508:CDS
TGAGGTGGTGAGGGATGATT+TGG 0.386496 1.3:-74201686 None:intergenic
CTATCCTGCTGTTGATCCAT+TGG 0.388341 1.3:+74204390 MS.gene029508:CDS
ATCTTTCCTCCTCTTTGGTA+TGG 0.392214 1.3:-74203370 None:intergenic
CCAACATTGTCTACTGATCT+TGG 0.396356 1.3:+74204094 MS.gene029508:CDS
GAACAAGTATTTACACTGAT+AGG 0.402727 1.3:-74202102 None:intergenic
GTAGGAGCTTCTCTATGAAT+AGG 0.403993 1.3:-74203186 None:intergenic
CTCTTTGAAAGATGGCTTCA+CGG 0.408787 1.3:+74201617 None:intergenic
CCATTCAGGTTCCCGTTGGC+AGG 0.418779 1.3:+74202978 MS.gene029508:intron
CCCGTTGGCAGGTGTACTCT+TGG 0.425281 1.3:+74202989 MS.gene029508:CDS
TGCGATTGGACAGGTTTGTC+AGG 0.431621 1.3:+74201885 MS.gene029508:CDS
TACCAAAGAGGAGGAAAGAT+TGG 0.432147 1.3:+74203373 MS.gene029508:CDS
ACAGATGAATTTACTGGTAA+AGG 0.438215 1.3:+74201862 MS.gene029508:CDS
AGAGAATTGTACTAGTTTCA+AGG 0.440200 1.3:+74204663 MS.gene029508:CDS
CTCCTCTTTGGTATGGTGCA+AGG 0.442168 1.3:-74203363 None:intergenic
GCCACGGAAGGAGTTGTTAG+AGG 0.442751 1.3:+74202054 MS.gene029508:CDS
GGACAGGTTTGTCAGGTGAT+TGG 0.443988 1.3:+74201892 MS.gene029508:CDS
GAAGTCTTCACTGGTGCCCC+TGG 0.444882 1.3:+74204622 MS.gene029508:CDS
TATACAAGTCGTTACCCTCT+CGG 0.450847 1.3:-74203613 None:intergenic
GGAGGAGTCTGAGGAGGAGC+GGG 0.453232 1.3:-74201805 None:intergenic
GTTGGAGGTTGCACAACATA+TGG 0.453780 1.3:+74201999 MS.gene029508:CDS
GGTCGCATTCCATCTGCTGT+TGG 0.461688 1.3:+74204064 MS.gene029508:CDS
ACCTCGAGCGCAGTAAGAAT+CGG 0.464761 1.3:-74201952 None:intergenic
AGCGGGAGCTGCAGCAGCCG+CGG 0.467946 1.3:-74201788 None:intergenic
TTGTTTGGTGGTGCTGGTGT+AGG 0.469965 1.3:+74203397 MS.gene029508:CDS
TTCTACCAGATTGGTGTTGG+AGG 0.474155 1.3:+74201984 MS.gene029508:CDS
AACAAGTATTTACACTGATA+GGG 0.474457 1.3:-74202101 None:intergenic
TTCAAGTCGACATATTTGCC+AGG 0.475504 1.3:-74204640 None:intergenic
GTTGCTTGTTCAACAAAAGT+AGG 0.475828 1.3:-74203204 None:intergenic
AAGTGAGCAAAGGTGGTAGC+TGG 0.477958 1.3:-74204211 None:intergenic
GGAGAACCTATCGATCATAA+AGG 0.484786 1.3:+74203031 MS.gene029508:CDS
TCAGAGGTGTCTGCCTTGCT+TGG 0.485682 1.3:+74204043 MS.gene029508:CDS
AATTCTTGTGACCGGTATCA+AGG 0.486500 1.3:+74203236 MS.gene029508:CDS
TGCAACCTCCAACACCAATC+TGG 0.487446 1.3:-74201989 None:intergenic
TCTCGATCATTCTACCAGAT+TGG 0.487639 1.3:+74201975 MS.gene029508:CDS
CAGCAGGAACATAGATAGCT+TGG 0.488213 1.3:-74204168 None:intergenic
AGAAGAGATTCTGGATGTTG+AGG 0.489907 1.3:-74201704 None:intergenic
ATACAAGTCGTTACCCTCTC+GGG 0.496422 1.3:-74203612 None:intergenic
TGGTAAAGGTGCGATTGGAC+AGG 0.502211 1.3:+74201876 MS.gene029508:CDS
CATGTGGCAGAAGTCTTCAC+TGG 0.503014 1.3:+74204613 MS.gene029508:CDS
TTTACTGGTAAAGGTGCGAT+TGG 0.504437 1.3:+74201871 MS.gene029508:CDS
CGCTCCTCCTCAGACTCCTC+CGG 0.504794 1.3:+74201807 MS.gene029508:CDS
CATTAAGCTTGGTGATCAGC+AGG 0.509927 1.3:+74203658 MS.gene029508:CDS
TATAGAGAAATGATTGAGAG+TGG 0.511529 1.3:+74203632 MS.gene029508:CDS
GCAAAGGTGGTAGCTGGAGC+AGG 0.511863 1.3:-74204205 None:intergenic
TCATTCTACCAGATTGGTGT+TGG 0.514550 1.3:+74201981 MS.gene029508:CDS
TTCTGGATGTTGAGGTGGTG+AGG 0.515925 1.3:-74201696 None:intergenic
CCAAGAGTACACCTGCCAAC+GGG 0.515968 1.3:-74202989 None:intergenic
CCTGGTGCTCGTGCCCGTGT+TGG 0.516375 1.3:+74203804 MS.gene029508:CDS
TGTAAAATGCTTGTTCTGAA+AGG 0.518148 1.3:-74205209 None:intergenic
GAAGACTTCTGCCACATGGA+AGG 0.519142 1.3:-74204608 None:intergenic
GGTAATTGAACCCTTCTTGG+TGG 0.519165 1.3:-74204140 None:intergenic
TGAACTAATGCAGGGTGTGT+TGG 0.523112 1.3:+74205170 MS.gene029508:intron
GTAATCTTTCCACCACCGTC+AGG 0.524642 1.3:-74201841 None:intergenic
TGCTCATCACCCAAAATAAG+TGG 0.527620 1.3:-74204436 None:intergenic
GGTCACAAGAATTTGTTGTT+CGG 0.528371 1.3:-74203226 None:intergenic
CCGTCAGGAACTTTCTTAGC+CGG 0.528890 1.3:-74201826 None:intergenic
GAGAGTGGAGTCATTAAGCT+TGG 0.530056 1.3:+74203647 MS.gene029508:CDS
AACAATGTCGCAAAGGCTCA+TGG 0.531884 1.3:+74203448 MS.gene029508:CDS
AACTATTGCTATGGATGCCA+CGG 0.532047 1.3:+74202038 MS.gene029508:CDS
TCAGGTGATTGGTGCTGTGG+TGG 0.537904 1.3:+74201903 MS.gene029508:CDS
GGATCTGTCAAGTCATCAGC+AGG 0.539160 1.3:-74204184 None:intergenic
TCTGGATGTTGAGGTGGTGA+GGG 0.539855 1.3:-74201695 None:intergenic
AATTCGCCTTTATGATCGAT+AGG 0.542417 1.3:-74203037 None:intergenic
GAATCCAATGGATCAACAGC+AGG 0.543347 1.3:-74204394 None:intergenic
AAGACTTCTGCCACATGGAA+GGG 0.546375 1.3:-74204607 None:intergenic
GCGTATTACAACCACCAAGA+AGG 0.546572 1.3:+74204129 MS.gene029508:CDS
AGGGATGATTTGGATAGAGA+TGG 0.547033 1.3:-74201676 None:intergenic
TTCTTAGCCGGAGGAGTCTG+AGG 0.548263 1.3:-74201814 None:intergenic
AACACGGGCACGAGCACCAG+GGG 0.551252 1.3:-74203802 None:intergenic
AGCCGCGGCTGTAGCATACT+CGG 0.552420 1.3:-74201773 None:intergenic
AAGAAAGTTCCTGACGGTGG+TGG 0.552444 1.3:+74201832 MS.gene029508:CDS
ACTCGGTAACACGGTTAAGA+AGG 0.555449 1.3:-74201756 None:intergenic
CGGAGGAGTCTGAGGAGGAG+CGG 0.557119 1.3:-74201806 None:intergenic
CAAGGCAGACACCTCTGAGT+TGG 0.558674 1.3:-74204038 None:intergenic
TACAACAGTGTTGTCAAGAC+AGG 0.559306 1.3:+74204240 MS.gene029508:CDS
TCCGATTCTTACTGCGCTCG+AGG 0.564136 1.3:+74201951 MS.gene029508:CDS
AGATGGAATGCGACCAAGCA+AGG 0.564270 1.3:-74204056 None:intergenic
GGTTGATAACCAACAGCAGA+TGG 0.565470 1.3:-74204073 None:intergenic
ACGGTTAAGAAGGTAAGCAT+AGG 0.566888 1.3:-74201746 None:intergenic
CCCTCTAACAACTCCTTCCG+TGG 0.568223 1.3:-74202055 None:intergenic
AACATAGATAGCTTGGACAG+AGG 0.572715 1.3:-74204161 None:intergenic
ATTTACACTGATAGGGGAGC+CGG 0.574020 1.3:-74202094 None:intergenic
CAACACGGGCACGAGCACCA+GGG 0.575730 1.3:-74203803 None:intergenic
CGTATTACAACCACCAAGAA+GGG 0.576665 1.3:+74204130 MS.gene029508:CDS
TTGTCAGGTGATTGGTGCTG+TGG 0.581396 1.3:+74201900 MS.gene029508:CDS
GGAAAGATTGGATTGTTTGG+TGG 0.584577 1.3:+74203385 MS.gene029508:CDS
TGAACATAGATCTCTGAGCT+TGG 0.584953 1.3:+74204364 MS.gene029508:intron
TCAAGTCGACATATTTGCCA+GGG 0.585073 1.3:-74204639 None:intergenic
ATACGAGATGTTGAATCCAA+TGG 0.586954 1.3:-74204406 None:intergenic
CAGTGAAGACTTCTGCCACA+TGG 0.590023 1.3:-74204612 None:intergenic
ATTCGCAAATACCTTGATAC+CGG 0.592050 1.3:-74203247 None:intergenic
CGGTTAAGAAGGTAAGCATA+GGG 0.593834 1.3:-74201745 None:intergenic
TTGGAGGTTGCACAACATAT+GGG 0.594665 1.3:+74202000 MS.gene029508:CDS
ATTTGCATACTTGAGTAAAG+CGG 0.595796 1.3:-74203905 None:intergenic
TTTGGATAGAGATGGACGGA+GGG 0.596872 1.3:-74201668 None:intergenic
AGCATCCAAGTGAGCAAAGG+TGG 0.598239 1.3:-74204218 None:intergenic
TGTTGTGAGAACTATTGCTA+TGG 0.599192 1.3:+74202029 MS.gene029508:CDS
ATTTGGATAGAGATGGACGG+AGG 0.599909 1.3:-74201669 None:intergenic
TCGGGTTCGTTCTCCAACAC+CGG 0.602823 1.3:-74203594 None:intergenic
ACTTATTAACAATGTCGCAA+AGG 0.603139 1.3:+74203441 MS.gene029508:CDS
AATTCCATTCAGGTTCCCGT+TGG 0.605383 1.3:+74202974 MS.gene029508:intron
CCACGGAAGGAGTTGTTAGA+GGG 0.608178 1.3:+74202055 MS.gene029508:CDS
TCAGGAACTTTCTTAGCCGG+AGG 0.611341 1.3:-74201823 None:intergenic
GAACAACAAATTCTTGTGAC+CGG 0.612009 1.3:+74203228 MS.gene029508:CDS
TCCAAGAGTACACCTGCCAA+CGG 0.615971 1.3:-74202990 None:intergenic
CCAAGATCAGTAGACAATGT+TGG 0.620434 1.3:-74204094 None:intergenic
ACAAGTATTTACACTGATAG+GGG 0.621699 1.3:-74202100 None:intergenic
CATCTTGTCCTTCAGCATCA+CGG 0.623861 1.3:-74203857 None:intergenic
CGGAAGGAGTTGTTAGAGGG+TGG 0.625071 1.3:+74202058 MS.gene029508:CDS
ACATTGTCTACTGATCTTGG+AGG 0.626628 1.3:+74204097 MS.gene029508:CDS
GTGGATGTGAGATTCGAAGA+AGG 0.629837 1.3:+74201922 MS.gene029508:CDS
CTAATGCAGGGTGTGTTGGA+TGG 0.633559 1.3:+74205174 MS.gene029508:intron
AGAGATTCTGGATGTTGAGG+TGG 0.635525 1.3:-74201701 None:intergenic
ATTGCTATGGATGCCACGGA+AGG 0.637249 1.3:+74202042 MS.gene029508:CDS
CAAGTCGACATATTTGCCAG+GGG 0.638676 1.3:-74204638 None:intergenic
GTTGCACAACATATGGGTGA+AGG 0.642855 1.3:+74202006 MS.gene029508:CDS
CTCCTTGCACCATACCAAAG+AGG 0.642909 1.3:+74203361 MS.gene029508:CDS
GAACATTTCCGTGATGCTGA+AGG 0.644056 1.3:+74203849 MS.gene029508:CDS
TGTAGCATCCAAGTGAGCAA+AGG 0.644891 1.3:-74204221 None:intergenic
GGGTGGCGTGTTCTCAACAC+CGG 0.644892 1.3:+74202075 MS.gene029508:CDS
TTAGCCGGAGGAGTCTGAGG+AGG 0.645635 1.3:-74201811 None:intergenic
GGATAGAGATGGACGGAGGG+AGG 0.645699 1.3:-74201665 None:intergenic
AAAGGCAGAGAAGATTGCTA+AGG 0.647562 1.3:+74205260 MS.gene029508:CDS
TAATCCAGTAAGACCAACAC+GGG 0.647834 1.3:-74203817 None:intergenic
GTTGGAGAACGAACCCGAGA+GGG 0.654723 1.3:+74203599 MS.gene029508:CDS
ATGATTTGGATAGAGATGGA+CGG 0.656779 1.3:-74201672 None:intergenic
TACTTGTTGTACACCTCGAG+CGG 0.660570 1.3:-74204467 None:intergenic
CTGTAGCATACTCGGTAACA+CGG 0.661294 1.3:-74201765 None:intergenic
TCGAGCGCAGTAAGAATCGG+AGG 0.661465 1.3:-74201949 None:intergenic
TATTGATGAAGTCATTGCAA+AGG 0.663663 1.3:+74205242 MS.gene029508:CDS
GAAGATTGCTAAGGAAAATG+CGG 0.670742 1.3:+74205269 MS.gene029508:CDS
CTTGCACCATACCAAAGAGG+AGG 0.675495 1.3:+74203364 MS.gene029508:CDS
CCGGCTAAGAAAGTTCCTGA+CGG 0.676215 1.3:+74201826 MS.gene029508:CDS
GAGCACTACGAAACCGCTCG+AGG 0.679828 1.3:+74204454 MS.gene029508:CDS
CTTAAGTCAGCCCTTCCATG+TGG 0.684956 1.3:+74204597 MS.gene029508:CDS
GCTAAGAAAGTTCCTGACGG+TGG 0.702490 1.3:+74201829 MS.gene029508:CDS
TGTTGGAGAACGAACCCGAG+AGG 0.706147 1.3:+74203598 MS.gene029508:CDS
TACCGAGTATGCTACAGCCG+CGG 0.717503 1.3:+74201771 MS.gene029508:CDS
TTAATCCAGTAAGACCAACA+CGG 0.720007 1.3:-74203818 None:intergenic
ACACGGGCACGAGCACCAGG+GGG 0.727891 1.3:-74203801 None:intergenic
GTAATTGTAGGCCAACTCAG+AGG 0.729723 1.3:+74204027 MS.gene029508:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAACTAAATAATTTGATT+TGG + chr1.3:74204333-74204352 MS.gene029508:intron 10.0%
!!! ATATTTTTTAACTAAAATAC+CGG - chr1.3:74205023-74205042 None:intergenic 10.0%
!! AAAACAAGAAACTTAATTAA+TGG - chr1.3:74202613-74202632 None:intergenic 15.0%
!! ATTATAACTCTCATATTAAA+AGG - chr1.3:74203984-74204003 None:intergenic 15.0%
!! TTTCTATTATGAAGAATATT+AGG + chr1.3:74202551-74202570 MS.gene029508:intron 15.0%
!!! GTTTAAATTAAGGTTTTTAT+AGG + chr1.3:74204993-74205012 MS.gene029508:intron 15.0%
!!! TAATTAAGTTTCTTGTTTTA+TGG + chr1.3:74202614-74202633 MS.gene029508:intron 15.0%
!! ACCAAAAATATCATTACAAT+TGG - chr1.3:74204306-74204325 None:intergenic 20.0%
!! GTAACAAATAAAACATACAA+TGG + chr1.3:74202307-74202326 MS.gene029508:intron 20.0%
!! TGAAAAAAATCATGTAAGAT+TGG - chr1.3:74203327-74203346 None:intergenic 20.0%
!! TTTATCAAAGTTCTTAACTA+TGG + chr1.3:74203719-74203738 MS.gene029508:intron 20.0%
!!! AATGAAAAGTATAAACTATG+TGG - chr1.3:74202881-74202900 None:intergenic 20.0%
!!! ATGAAAAGTATAAACTATGT+GGG - chr1.3:74202880-74202899 None:intergenic 20.0%
!!! TTACATGATTTTTTTCATAC+AGG + chr1.3:74203330-74203349 MS.gene029508:intron 20.0%
! AAAAACATTGTTAGAGCAAA+TGG - chr1.3:74203093-74203112 None:intergenic 25.0%
! AACAAGTATTTACACTGATA+GGG - chr1.3:74202104-74202123 None:intergenic 25.0%
! AAGATTACAGATGAATTTAC+TGG + chr1.3:74201856-74201875 MS.gene029508:CDS 25.0%
! AATACTCGAAGCTTATTATA+AGG + chr1.3:74204915-74204934 MS.gene029508:intron 25.0%
! ATACTCGAAGCTTATTATAA+GGG + chr1.3:74204916-74204935 MS.gene029508:intron 25.0%
! ATATAGATAGTGATTAGTGA+AGG - chr1.3:74204867-74204886 None:intergenic 25.0%
! ATTAGTTCATAGAGAAAATC+CGG - chr1.3:74205159-74205178 None:intergenic 25.0%
! GAAGTAATTTAATCAGTGAA+TGG - chr1.3:74202450-74202469 None:intergenic 25.0%
! TATTGAAAAGAAAATTCCCA+AGG - chr1.3:74204899-74204918 None:intergenic 25.0%
! TGTTTATATACACTTCTTTC+TGG + chr1.3:74204962-74204981 MS.gene029508:intron 25.0%
!! ATGTTTTTCTATCAATTCCA+TGG + chr1.3:74203105-74203124 MS.gene029508:intron 25.0%
!! ATTTCTTCAATCTAAGATGA+TGG - chr1.3:74202190-74202209 None:intergenic 25.0%
!! GCCAATTGTAATGATATTTT+TGG + chr1.3:74204302-74204321 MS.gene029508:intron 25.0%
!! TAAGGTTTTTATAGGAAAAC+CGG + chr1.3:74205001-74205020 MS.gene029508:intron 25.0%
!! TGAAAAGTATAAACTATGTG+GGG - chr1.3:74202879-74202898 None:intergenic 25.0%
!! TTATTTGTTACAAACACGAA+AGG - chr1.3:74202298-74202317 None:intergenic 25.0%
!!! CAAGATATCATTGCTATTTT+GGG + chr1.3:74204511-74204530 MS.gene029508:CDS 25.0%
!!! CATTTCATTTTTTCTACTAG+TGG + chr1.3:74204753-74204772 MS.gene029508:intron 25.0%
!!! GGAAGTGTTTGTTTAAATTA+AGG + chr1.3:74204983-74205002 MS.gene029508:intron 25.0%
!!! TCAAGATATCATTGCTATTT+TGG + chr1.3:74204510-74204529 MS.gene029508:CDS 25.0%
AAAGAAAATTCCCAAGGAAT+AGG - chr1.3:74204893-74204912 None:intergenic 30.0%
ACAAGTATTTACACTGATAG+GGG - chr1.3:74202103-74202122 None:intergenic 30.0%
ACAGATGAATTTACTGGTAA+AGG + chr1.3:74201862-74201881 MS.gene029508:CDS 30.0%
ACTTATTAACAATGTCGCAA+AGG + chr1.3:74203441-74203460 MS.gene029508:CDS 30.0%
AGAAACCACCTGATAATAAA+TGG - chr1.3:74203565-74203584 None:intergenic 30.0%
AGGAAAAACTGTGCTTATTA+TGG + chr1.3:74203417-74203436 MS.gene029508:CDS 30.0%
ATAATGCCTGATGTAATTGT+AGG + chr1.3:74204015-74204034 MS.gene029508:intron 30.0%
ATCTATATGAACCTATTCCT+TGG + chr1.3:74204879-74204898 MS.gene029508:intron 30.0%
ATGAATAGGCAAAAAATGCT+CGG - chr1.3:74203175-74203194 None:intergenic 30.0%
ATTTGCATACTTGAGTAAAG+CGG - chr1.3:74203908-74203927 None:intergenic 30.0%
CTCAAGTATGCAAATTATCT+AGG + chr1.3:74203913-74203932 MS.gene029508:intron 30.0%
GAACAAGTATTTACACTGAT+AGG - chr1.3:74202105-74202124 None:intergenic 30.0%
GAGTGTTTCCATTTATTATC+AGG + chr1.3:74203554-74203573 MS.gene029508:intron 30.0%
TAAGTTCCTGTATGATCATA+AGG - chr1.3:74204721-74204740 None:intergenic 30.0%
TATAGAGAAATGATTGAGAG+TGG + chr1.3:74203632-74203651 MS.gene029508:CDS 30.0%
TATTGATGAAGTCATTGCAA+AGG + chr1.3:74205242-74205261 MS.gene029508:CDS 30.0%
TCTATATGAACCTATTCCTT+GGG + chr1.3:74204880-74204899 MS.gene029508:intron 30.0%
TGATCATACAGGAACTTATT+TGG + chr1.3:74204723-74204742 MS.gene029508:intron 30.0%
TGTTTCCATTTATTATCAGG+TGG + chr1.3:74203557-74203576 MS.gene029508:intron 30.0%
TTTCTCTATGAACTAATGCA+GGG + chr1.3:74205162-74205181 MS.gene029508:intron 30.0%
! AGAGAATTGTACTAGTTTCA+AGG + chr1.3:74204663-74204682 MS.gene029508:CDS 30.0%
! ATGAGTTGAAAAACATTCCA+TGG - chr1.3:74203125-74203144 None:intergenic 30.0%
! GATGATGGTGATATATAGAT+TGG - chr1.3:74202175-74202194 None:intergenic 30.0%
! TATGCTTTCACCACTTATTT+TGG + chr1.3:74204426-74204445 MS.gene029508:CDS 30.0%
! TCTTAACTATGGTTGTTTCA+TGG + chr1.3:74203730-74203749 MS.gene029508:intron 30.0%
! TGGACTGAAAAAAGATTTTG+AGG - chr1.3:74203073-74203092 None:intergenic 30.0%
! TGTAAAATGCTTGTTCTGAA+AGG - chr1.3:74205212-74205231 None:intergenic 30.0%
! TTCAGAACAAGCATTTTACA+TGG + chr1.3:74205212-74205231 MS.gene029508:CDS 30.0%
! TTTTCTCTATGAACTAATGC+AGG + chr1.3:74205161-74205180 MS.gene029508:intron 30.0%
!! ATGCTTTCACCACTTATTTT+GGG + chr1.3:74204427-74204446 MS.gene029508:CDS 30.0%
!!! TATCATTGCTATTTTGGGAA+TGG + chr1.3:74204516-74204535 MS.gene029508:CDS 30.0%
AAATCCGGTCAAATTGTTTG+TGG - chr1.3:74205144-74205163 None:intergenic 35.0%
AAGCAACTTCCAAACAAATC+TGG - chr1.3:74204834-74204853 None:intergenic 35.0%
AATGCTTGTGAATTCCATTC+AGG + chr1.3:74202964-74202983 MS.gene029508:intron 35.0%
AATTCGCCTTTATGATCGAT+AGG - chr1.3:74203040-74203059 None:intergenic 35.0%
ATACGAGATGTTGAATCCAA+TGG - chr1.3:74204409-74204428 None:intergenic 35.0%
ATTCGCAAATACCTTGATAC+CGG - chr1.3:74203250-74203269 None:intergenic 35.0%
CAATCCACAAACAATTTGAC+CGG + chr1.3:74205137-74205156 MS.gene029508:intron 35.0%
GAACAACAAATTCTTGTGAC+CGG + chr1.3:74203228-74203247 MS.gene029508:CDS 35.0%
GAAGATTGCTAAGGAAAATG+CGG + chr1.3:74205269-74205288 MS.gene029508:CDS 35.0%
GGACGTATCATGAATGTTAT+TGG + chr1.3:74203010-74203029 MS.gene029508:CDS 35.0%
GTATGATCATAAGGAAAGCA+TGG - chr1.3:74204712-74204731 None:intergenic 35.0%
GTTGCTTGTTCAACAAAAGT+AGG - chr1.3:74203207-74203226 None:intergenic 35.0%
TGATTGAGAAGAAGAGATTC+TGG - chr1.3:74201716-74201735 None:intergenic 35.0%
TGCTTTCCTTATGATCATAC+AGG + chr1.3:74204712-74204731 MS.gene029508:intron 35.0%
TGGATTGCATAGAAACAAAC+TGG - chr1.3:74205124-74205143 None:intergenic 35.0%
TGTTGTGAGAACTATTGCTA+TGG + chr1.3:74202029-74202048 MS.gene029508:CDS 35.0%
TTAATCCAGTAAGACCAACA+CGG - chr1.3:74203821-74203840 None:intergenic 35.0%
TTATGGTGAAGTTCTTTGCA+AGG + chr1.3:74202631-74202650 MS.gene029508:intron 35.0%
! AGCAAATGTGCTCTTGTTTA+TGG + chr1.3:74203765-74203784 MS.gene029508:CDS 35.0%
! ATGATTTGGATAGAGATGGA+CGG - chr1.3:74201675-74201694 None:intergenic 35.0%
! GAACAAGCATTTTACATGGT+TGG + chr1.3:74205216-74205235 MS.gene029508:CDS 35.0%
! GCTCAATCTCAACTTTCTTT+TGG + chr1.3:74202826-74202845 MS.gene029508:intron 35.0%
!! GGTCACAAGAATTTGTTGTT+CGG - chr1.3:74203229-74203248 None:intergenic 35.0%
AAAGGCAGAGAAGATTGCTA+AGG + chr1.3:74205260-74205279 MS.gene029508:CDS 40.0%
AACATAGATAGCTTGGACAG+AGG - chr1.3:74204164-74204183 None:intergenic 40.0%
AACTATTGCTATGGATGCCA+CGG + chr1.3:74202038-74202057 MS.gene029508:CDS 40.0%
AACTTCCAAACAAATCTGGC+AGG - chr1.3:74204830-74204849 None:intergenic 40.0%
AATTCTTGTGACCGGTATCA+AGG + chr1.3:74203236-74203255 MS.gene029508:CDS 40.0%
ACATTGTCTACTGATCTTGG+AGG + chr1.3:74204097-74204116 MS.gene029508:CDS 40.0%
ACGGTTAAGAAGGTAAGCAT+AGG - chr1.3:74201749-74201768 None:intergenic 40.0%
AGAAGAGATTCTGGATGTTG+AGG - chr1.3:74201707-74201726 None:intergenic 40.0%
AGAGGTAATTGAACCCTTCT+TGG - chr1.3:74204146-74204165 None:intergenic 40.0%
ATCCAATCTTTCCTCCTCTT+TGG - chr1.3:74203378-74203397 None:intergenic 40.0%
ATCTTTCCTCCTCTTTGGTA+TGG - chr1.3:74203373-74203392 None:intergenic 40.0%
CCAACATTGTCTACTGATCT+TGG + chr1.3:74204094-74204113 MS.gene029508:CDS 40.0%
CCAAGATCAGTAGACAATGT+TGG - chr1.3:74204097-74204116 None:intergenic 40.0%
CGGTTAAGAAGGTAAGCATA+GGG - chr1.3:74201748-74201767 None:intergenic 40.0%
CGTATTACAACCACCAAGAA+GGG + chr1.3:74204130-74204149 MS.gene029508:CDS 40.0%
GGAAAGATTGGATTGTTTGG+TGG + chr1.3:74203385-74203404 MS.gene029508:CDS 40.0%
GGAGAACCTATCGATCATAA+AGG + chr1.3:74203031-74203050 MS.gene029508:CDS 40.0%
GGAGGAAAGATTGGATTGTT+TGG + chr1.3:74203382-74203401 MS.gene029508:CDS 40.0%
GTAGGAGCTTCTCTATGAAT+AGG - chr1.3:74203189-74203208 None:intergenic 40.0%
TAATCCAGTAAGACCAACAC+GGG - chr1.3:74203820-74203839 None:intergenic 40.0%
TACAACAGTGTTGTCAAGAC+AGG + chr1.3:74204240-74204259 MS.gene029508:CDS 40.0%
TACCAAAGAGGAGGAAAGAT+TGG + chr1.3:74203373-74203392 MS.gene029508:CDS 40.0%
TATACAAGTCGTTACCCTCT+CGG - chr1.3:74203616-74203635 None:intergenic 40.0%
TCAAGTCGACATATTTGCCA+GGG - chr1.3:74204642-74204661 None:intergenic 40.0%
TCATTCTACCAGATTGGTGT+TGG + chr1.3:74201981-74202000 MS.gene029508:CDS 40.0%
TCTCGATCATTCTACCAGAT+TGG + chr1.3:74201975-74201994 MS.gene029508:CDS 40.0%
TGAACATAGATCTCTGAGCT+TGG + chr1.3:74204364-74204383 MS.gene029508:intron 40.0%
TGCTCATCACCCAAAATAAG+TGG - chr1.3:74204439-74204458 None:intergenic 40.0%
TTCAAGTCGACATATTTGCC+AGG - chr1.3:74204643-74204662 None:intergenic 40.0%
TTGGAGGTTGCACAACATAT+GGG + chr1.3:74202000-74202019 MS.gene029508:CDS 40.0%
! AATTTTACGAGCACGTGCAA+CGG - chr1.3:74204569-74204588 None:intergenic 40.0%
! AGGGATGATTTGGATAGAGA+TGG - chr1.3:74201679-74201698 None:intergenic 40.0%
! AGTTGGCCTACAATTACATC+AGG - chr1.3:74204024-74204043 None:intergenic 40.0%
! CAAGCATTTTACATGGTTGG+TGG + chr1.3:74205219-74205238 MS.gene029508:CDS 40.0%
! TTTACTGGTAAAGGTGCGAT+TGG + chr1.3:74201871-74201890 MS.gene029508:CDS 40.0%
AACAATGTCGCAAAGGCTCA+TGG + chr1.3:74203448-74203467 MS.gene029508:CDS 45.0%
AAGACTTCTGCCACATGGAA+GGG - chr1.3:74204610-74204629 None:intergenic 45.0%
ACTCGGTAACACGGTTAAGA+AGG - chr1.3:74201759-74201778 None:intergenic 45.0%
AGAGATTCTGGATGTTGAGG+TGG - chr1.3:74201704-74201723 None:intergenic 45.0%
ATACAAGTCGTTACCCTCTC+GGG - chr1.3:74203615-74203634 None:intergenic 45.0%
ATTTACACTGATAGGGGAGC+CGG - chr1.3:74202097-74202116 None:intergenic 45.0%
ATTTGGATAGAGATGGACGG+AGG - chr1.3:74201672-74201691 None:intergenic 45.0%
CAAGTCGACATATTTGCCAG+GGG - chr1.3:74204641-74204660 None:intergenic 45.0%
CAGCAGGAACATAGATAGCT+TGG - chr1.3:74204171-74204190 None:intergenic 45.0%
CATCTTGTCCTTCAGCATCA+CGG - chr1.3:74203860-74203879 None:intergenic 45.0%
CTATCCTGCTGTTGATCCAT+TGG + chr1.3:74204390-74204409 MS.gene029508:CDS 45.0%
CTGTAGCATACTCGGTAACA+CGG - chr1.3:74201768-74201787 None:intergenic 45.0%
GAACATTTCCGTGATGCTGA+AGG + chr1.3:74203849-74203868 MS.gene029508:CDS 45.0%
GAATCCAATGGATCAACAGC+AGG - chr1.3:74204397-74204416 None:intergenic 45.0%
GAGAGTGGAGTCATTAAGCT+TGG + chr1.3:74203647-74203666 MS.gene029508:CDS 45.0%
GCGTATTACAACCACCAAGA+AGG + chr1.3:74204129-74204148 MS.gene029508:CDS 45.0%
GGTAATTGAACCCTTCTTGG+TGG - chr1.3:74204143-74204162 None:intergenic 45.0%
GTAATTGTAGGCCAACTCAG+AGG + chr1.3:74204027-74204046 MS.gene029508:intron 45.0%
GTGGATGTGAGATTCGAAGA+AGG + chr1.3:74201922-74201941 MS.gene029508:CDS 45.0%
GTTGCACAACATATGGGTGA+AGG + chr1.3:74202006-74202025 MS.gene029508:CDS 45.0%
GTTGGAGGTTGCACAACATA+TGG + chr1.3:74201999-74202018 MS.gene029508:CDS 45.0%
TGAACTAATGCAGGGTGTGT+TGG + chr1.3:74205170-74205189 MS.gene029508:intron 45.0%
TGTAGCATCCAAGTGAGCAA+AGG - chr1.3:74204224-74204243 None:intergenic 45.0%
TTTGGATAGAGATGGACGGA+GGG - chr1.3:74201671-74201690 None:intergenic 45.0%
! AATTCCATTCAGGTTCCCGT+TGG + chr1.3:74202974-74202993 MS.gene029508:intron 45.0%
! CATTAAGCTTGGTGATCAGC+AGG + chr1.3:74203658-74203677 MS.gene029508:CDS 45.0%
! CATTGCCTGCCAGATTTGTT+TGG + chr1.3:74204822-74204841 MS.gene029508:intron 45.0%
! GTGAAGTGTCTGTGCTACAT+TGG + chr1.3:74202761-74202780 MS.gene029508:intron 45.0%
!! ATTGGATTGTTTGGTGGTGC+TGG + chr1.3:74203391-74203410 MS.gene029508:CDS 45.0%
!! GGTTGATAACCAACAGCAGA+TGG - chr1.3:74204076-74204095 None:intergenic 45.0%
!! TACTTGTTGTACACCTCGAG+CGG - chr1.3:74204470-74204489 None:intergenic 45.0%
!! TTCTACCAGATTGGTGTTGG+AGG + chr1.3:74201984-74202003 MS.gene029508:CDS 45.0%
!!! GGTGGTTTCTCTGTTTTTGC+CGG + chr1.3:74203575-74203594 MS.gene029508:intron 45.0%
!!! TTCTCTGTTTTTGCCGGTGT+TGG + chr1.3:74203581-74203600 MS.gene029508:CDS 45.0%
AAGAAAGTTCCTGACGGTGG+TGG + chr1.3:74201832-74201851 MS.gene029508:CDS 50.0%
AAGTGAGCAAAGGTGGTAGC+TGG - chr1.3:74204214-74204233 None:intergenic 50.0%
ACCTCGAGCGCAGTAAGAAT+CGG - chr1.3:74201955-74201974 None:intergenic 50.0%
AGATGGAATGCGACCAAGCA+AGG - chr1.3:74204059-74204078 None:intergenic 50.0%
AGCATCCAAGTGAGCAAAGG+TGG - chr1.3:74204221-74204240 None:intergenic 50.0%
AGCTACCACCTTTGCTCACT+TGG + chr1.3:74204213-74204232 MS.gene029508:CDS 50.0%
ATTGCTATGGATGCCACGGA+AGG + chr1.3:74202042-74202061 MS.gene029508:CDS 50.0%
CAGTGAAGACTTCTGCCACA+TGG - chr1.3:74204615-74204634 None:intergenic 50.0%
CATGTGGCAGAAGTCTTCAC+TGG + chr1.3:74204613-74204632 MS.gene029508:CDS 50.0%
CCACGGAAGGAGTTGTTAGA+GGG + chr1.3:74202055-74202074 MS.gene029508:CDS 50.0%
CCGGCTAAGAAAGTTCCTGA+CGG + chr1.3:74201826-74201845 MS.gene029508:CDS 50.0%
CCGTCAGGAACTTTCTTAGC+CGG - chr1.3:74201829-74201848 None:intergenic 50.0%
CTAATGCAGGGTGTGTTGGA+TGG + chr1.3:74205174-74205193 MS.gene029508:intron 50.0%
CTCCTCTTTGGTATGGTGCA+AGG - chr1.3:74203366-74203385 None:intergenic 50.0%
CTCCTTGCACCATACCAAAG+AGG + chr1.3:74203361-74203380 MS.gene029508:CDS 50.0%
CTTAAGTCAGCCCTTCCATG+TGG + chr1.3:74204597-74204616 MS.gene029508:CDS 50.0%
CTTGCACCATACCAAAGAGG+AGG + chr1.3:74203364-74203383 MS.gene029508:CDS 50.0%
GAAGACTTCTGCCACATGGA+AGG - chr1.3:74204611-74204630 None:intergenic 50.0%
GCTAAGAAAGTTCCTGACGG+TGG + chr1.3:74201829-74201848 MS.gene029508:CDS 50.0%
GGACAGGTTTGTCAGGTGAT+TGG + chr1.3:74201892-74201911 MS.gene029508:CDS 50.0%
GGATCTGTCAAGTCATCAGC+AGG - chr1.3:74204187-74204206 None:intergenic 50.0%
GTAATCTTTCCACCACCGTC+AGG - chr1.3:74201844-74201863 None:intergenic 50.0%
TCAGGAACTTTCTTAGCCGG+AGG - chr1.3:74201826-74201845 None:intergenic 50.0%
TCTGGATGTTGAGGTGGTGA+GGG - chr1.3:74201698-74201717 None:intergenic 50.0%
TGAGGTGGTGAGGGATGATT+TGG - chr1.3:74201689-74201708 None:intergenic 50.0%
TGCAACCTCCAACACCAATC+TGG - chr1.3:74201992-74202011 None:intergenic 50.0%
TGCGATTGGACAGGTTTGTC+AGG + chr1.3:74201885-74201904 MS.gene029508:CDS 50.0%
TTCTGGATGTTGAGGTGGTG+AGG - chr1.3:74201699-74201718 None:intergenic 50.0%
! TCCAAGAGTACACCTGCCAA+CGG - chr1.3:74202993-74203012 None:intergenic 50.0%
! TGGTAAAGGTGCGATTGGAC+AGG + chr1.3:74201876-74201895 MS.gene029508:CDS 50.0%
!! TTGTCAGGTGATTGGTGCTG+TGG + chr1.3:74201900-74201919 MS.gene029508:CDS 50.0%
!! TTGTTTGGTGGTGCTGGTGT+AGG + chr1.3:74203397-74203416 MS.gene029508:CDS 50.0%
CAAGGCAGACACCTCTGAGT+TGG - chr1.3:74204041-74204060 None:intergenic 55.0%
CCCTCTAACAACTCCTTCCG+TGG - chr1.3:74202058-74202077 None:intergenic 55.0%
CGGAAGGAGTTGTTAGAGGG+TGG + chr1.3:74202058-74202077 MS.gene029508:CDS 55.0%
GCCACGGAAGGAGTTGTTAG+AGG + chr1.3:74202054-74202073 MS.gene029508:CDS 55.0%
GGTCGCATTCCATCTGCTGT+TGG + chr1.3:74204064-74204083 MS.gene029508:CDS 55.0%
GTTGGAGAACGAACCCGAGA+GGG + chr1.3:74203599-74203618 MS.gene029508:CDS 55.0%
TACCGAGTATGCTACAGCCG+CGG + chr1.3:74201771-74201790 MS.gene029508:CDS 55.0%
TCCGATTCTTACTGCGCTCG+AGG + chr1.3:74201951-74201970 MS.gene029508:CDS 55.0%
TCGAGCGCAGTAAGAATCGG+AGG - chr1.3:74201952-74201971 None:intergenic 55.0%
TCGGGTTCGTTCTCCAACAC+CGG - chr1.3:74203597-74203616 None:intergenic 55.0%
TGTTGGAGAACGAACCCGAG+AGG + chr1.3:74203598-74203617 MS.gene029508:CDS 55.0%
TTCTTAGCCGGAGGAGTCTG+AGG - chr1.3:74201817-74201836 None:intergenic 55.0%
! CCAAGAGTACACCTGCCAAC+GGG - chr1.3:74202992-74203011 None:intergenic 55.0%
!! TCAGAGGTGTCTGCCTTGCT+TGG + chr1.3:74204043-74204062 MS.gene029508:CDS 55.0%
!! TCAGGTGATTGGTGCTGTGG+TGG + chr1.3:74201903-74201922 MS.gene029508:CDS 55.0%
AGCCGCGGCTGTAGCATACT+CGG - chr1.3:74201776-74201795 None:intergenic 60.0%
CCCGTTGGCAGGTGTACTCT+TGG + chr1.3:74202989-74203008 MS.gene029508:CDS 60.0%
CCTGCCAACGGGAACCTGAA+TGG - chr1.3:74202981-74203000 None:intergenic 60.0%
GAAGTCTTCACTGGTGCCCC+TGG + chr1.3:74204622-74204641 MS.gene029508:CDS 60.0%
GAGCACTACGAAACCGCTCG+AGG + chr1.3:74204454-74204473 MS.gene029508:CDS 60.0%
GCAAAGGTGGTAGCTGGAGC+AGG - chr1.3:74204208-74204227 None:intergenic 60.0%
GGATAGAGATGGACGGAGGG+AGG - chr1.3:74201668-74201687 None:intergenic 60.0%
GGGTGGCGTGTTCTCAACAC+CGG + chr1.3:74202075-74202094 MS.gene029508:CDS 60.0%
GGTCAAATGAACGAGCCCCC+TGG + chr1.3:74203786-74203805 MS.gene029508:CDS 60.0%
TTAGCCGGAGGAGTCTGAGG+AGG - chr1.3:74201814-74201833 None:intergenic 60.0%
! CCATTCAGGTTCCCGTTGGC+AGG + chr1.3:74202978-74202997 MS.gene029508:intron 60.0%
!! CGTGCCCGTGTTGGTCTTAC+TGG + chr1.3:74203813-74203832 MS.gene029508:CDS 60.0%
AACACGGGCACGAGCACCAG+GGG - chr1.3:74203805-74203824 None:intergenic 65.0%
CAACACGGGCACGAGCACCA+GGG - chr1.3:74203806-74203825 None:intergenic 65.0%
CGCTCCTCCTCAGACTCCTC+CGG + chr1.3:74201807-74201826 MS.gene029508:CDS 65.0%
CGGAGGAGTCTGAGGAGGAG+CGG - chr1.3:74201809-74201828 None:intergenic 65.0%
GGAGGAGTCTGAGGAGGAGC+GGG - chr1.3:74201808-74201827 None:intergenic 65.0%
ACACGGGCACGAGCACCAGG+GGG - chr1.3:74203804-74203823 None:intergenic 70.0%
CCAACACGGGCACGAGCACC+AGG - chr1.3:74203807-74203826 None:intergenic 70.0%
CCTGGTGCTCGTGCCCGTGT+TGG + chr1.3:74203804-74203823 MS.gene029508:CDS 70.0%
AGCGGGAGCTGCAGCAGCCG+CGG - chr1.3:74201791-74201810 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 74201628 74205296 74201628 ID=MS.gene029508
chr1.3 mRNA 74201628 74205296 74201628 ID=MS.gene029508.t1;Parent=MS.gene029508
chr1.3 exon 74201628 74202110 74201628 ID=MS.gene029508.t1.exon1;Parent=MS.gene029508.t1
chr1.3 CDS 74201628 74202110 74201628 ID=cds.MS.gene029508.t1;Parent=MS.gene029508.t1
chr1.3 exon 74202986 74203061 74202986 ID=MS.gene029508.t1.exon2;Parent=MS.gene029508.t1
chr1.3 CDS 74202986 74203061 74202986 ID=cds.MS.gene029508.t1;Parent=MS.gene029508.t1
chr1.3 exon 74203169 74203257 74203169 ID=MS.gene029508.t1.exon3;Parent=MS.gene029508.t1
chr1.3 CDS 74203169 74203257 74203169 ID=cds.MS.gene029508.t1;Parent=MS.gene029508.t1
chr1.3 exon 74203352 74203469 74203352 ID=MS.gene029508.t1.exon4;Parent=MS.gene029508.t1
chr1.3 CDS 74203352 74203469 74203352 ID=cds.MS.gene029508.t1;Parent=MS.gene029508.t1
chr1.3 exon 74203576 74203679 74203576 ID=MS.gene029508.t1.exon5;Parent=MS.gene029508.t1
chr1.3 CDS 74203576 74203679 74203576 ID=cds.MS.gene029508.t1;Parent=MS.gene029508.t1
chr1.3 exon 74203759 74203917 74203759 ID=MS.gene029508.t1.exon6;Parent=MS.gene029508.t1
chr1.3 CDS 74203759 74203917 74203759 ID=cds.MS.gene029508.t1;Parent=MS.gene029508.t1
chr1.3 exon 74204037 74204261 74204037 ID=MS.gene029508.t1.exon7;Parent=MS.gene029508.t1
chr1.3 CDS 74204037 74204261 74204037 ID=cds.MS.gene029508.t1;Parent=MS.gene029508.t1
chr1.3 exon 74204373 74204684 74204373 ID=MS.gene029508.t1.exon8;Parent=MS.gene029508.t1
chr1.3 CDS 74204373 74204684 74204373 ID=cds.MS.gene029508.t1;Parent=MS.gene029508.t1
chr1.3 exon 74205183 74205296 74205183 ID=MS.gene029508.t1.exon9;Parent=MS.gene029508.t1
chr1.3 CDS 74205183 74205296 74205183 ID=cds.MS.gene029508.t1;Parent=MS.gene029508.t1
Gene Sequence

>MS.gene029508

ATGGCTTCACGGAGAATCGTTTCATCTTTGATACGTTCCTCCCTCCGTCCATCTCTATCCAAATCATCCCTCACCACCTCAACATCCAGAATCTCTTCTTCTCAATCACGTGCATCTCCCTATGCTTACCTTCTTAACCGTGTTACCGAGTATGCTACAGCCGCGGCTGCTGCAGCTCCCGCTCCTCCTCAGACTCCTCCGGCTAAGAAAGTTCCTGACGGTGGTGGAAAGATTACAGATGAATTTACTGGTAAAGGTGCGATTGGACAGGTTTGTCAGGTGATTGGTGCTGTGGTGGATGTGAGATTCGAAGAAGGTTTGCCTCCGATTCTTACTGCGCTCGAGGTTCTCGATCATTCTACCAGATTGGTGTTGGAGGTTGCACAACATATGGGTGAAGGTGTTGTGAGAACTATTGCTATGGATGCCACGGAAGGAGTTGTTAGAGGGTGGCGTGTTCTCAACACCGGCTCCCCTATCAGTGTAAATACTTGTTCACTTGCTGCAATTTATTCATATTTCTTTAGTTAAAAATGTCATTTTTCCAATCTATATATCACCATCATCTTAGATTGAAGAAATAGACACATTTTTACATTCAATCACTTATATTTTTTGTGTGTATATTTCAATATGTTTAATGTCTGTGTTAATGTTTCATGATCTTCCTTTCGTGTTTGTAACAAATAAAACATACAATGGCTTAAAAGTATCATATGTTTCAATTTCTATTTAGATTGAGATAAAAACAACTTTATATGTTGTTTTGTGTGAACATATATACATAACTTTTTTCTATAATGATCACAACATTCGTAACCATTCACTGATTAAATTACTTCATAGTGAAATATCAAAAAAAGTGTGTTTTCTTATCATTTTCAACACATTTTTCTATGTCGTTGTGTTTTCTTCTATCACATTTTCTATTATGAAGAATATTAGGTGATTTGATATAAATCAATATGAGTAATTTTTTATTCCATTAATTAAGTTTCTTGTTTTATGGTGAAGTTCTTTGCAAGGATATTGTTTTTGTTAGTTAGTCTATGAATTATACGACTATGAAACACTCACTTATAATAAGCAAATGAAAGTGTTAGTAAGTCTATCATATCATATATATCTTAAACGTGAAGTGTCTGTGCTACATTGGATTACGATCATATTGCTATTGTGAATGTGATCTAATCAATCTGCTCAATCTCAACTTTCTTTTGGACTTGCATTTTGCTGACATGAATTTAGCCCCACATAGTTTATACTTTTCATTTTGTGTCTCTCAGTATCATTGAATTTCTATATTTTCTTTCAAAAAGCGTTTAAGTATATACTAAATGCTTGTGAATTCCATTCAGGTTCCCGTTGGCAGGTGTACTCTTGGACGTATCATGAATGTTATTGGAGAACCTATCGATCATAAAGGCGAATTTAGTAAGAAACCTCAAAATCTTTTTTCAGTCCATTTGCTCTAACAATGTTTTTCTATCAATTCCATGGAATGTTTTTCAACTCATGATAAATTTTGTGAATTGCTTTAGAAACCGAGCATTTTTTGCCTATTCATAGAGAAGCTCCTACTTTTGTTGAACAAGCAACCGAACAACAAATTCTTGTGACCGGTATCAAGGTATTTGCGAATGCATCAATCTCATTTTATTAAATGTTGACGTCTGCAAATATCTAATGTCTTTTACCAATCTTACATGATTTTTTTCATACAGGTTGTTGATCTCCTTGCACCATACCAAAGAGGAGGAAAGATTGGATTGTTTGGTGGTGCTGGTGTAGGAAAAACTGTGCTTATTATGGAACTTATTAACAATGTCGCAAAGGCTCATGGTATATATATGTGCTAAGTAAACATACACTCAATTATTCTTGTTAAAATGCTCTTTAACATTTGTATATATACTATTGTATTTTGAGTGTTTCCATTTATTATCAGGTGGTTTCTCTGTTTTTGCCGGTGTTGGAGAACGAACCCGAGAGGGTAACGACTTGTATAGAGAAATGATTGAGAGTGGAGTCATTAAGCTTGGTGATCAGCAGGTGAACACAATGTTGTTCATGACTCACATTCTATTTATGTTTATCAAAGTTCTTAACTATGGTTGTTTCATGGATTCAGAGTGAAAGCAAATGTGCTCTTGTTTATGGTCAAATGAACGAGCCCCCTGGTGCTCGTGCCCGTGTTGGTCTTACTGGATTAACTGTTGCTGAACATTTCCGTGATGCTGAAGGACAAGATGTGCTTCTTTTCGTTGATAACATTTTCCGCTTTACTCAAGTATGCAAATTATCTAGGATAATCTATCTTCTATATATTTATCGATATTTTTGCTCATGTTCTCCTTTTAATATGAGAGTTATAATTGATCGACATTATAATGCCTGATGTAATTGTAGGCCAACTCAGAGGTGTCTGCCTTGCTTGGTCGCATTCCATCTGCTGTTGGTTATCAACCAACATTGTCTACTGATCTTGGAGGTCTTCAAGAGCGTATTACAACCACCAAGAAGGGTTCAATTACCTCTGTCCAAGCTATCTATGTTCCTGCTGATGACTTGACAGATCCTGCTCCAGCTACCACCTTTGCTCACTTGGATGCTACAACAGTGTTGTCAAGACAGGTTCGATCACTATGTTAATATTGATTAATTAAACTAAAGTGCCAATTGTAATGATATTTTTGGTTGTTATCATTAACTAAATAATTTGATTTGGATAAATATTGAACATAGATCTCTGAGCTTGGTATCTATCCTGCTGTTGATCCATTGGATTCAACATCTCGTATGCTTTCACCACTTATTTTGGGTGATGAGCACTACGAAACCGCTCGAGGTGTACAACAAGTACTTCAAAACTACAAGAATCTTCAAGATATCATTGCTATTTTGGGAATGGATGAGCTAAGTGAAGATGATAAATTGACCGTTGCACGTGCTCGTAAAATTCAACGATTCTTAAGTCAGCCCTTCCATGTGGCAGAAGTCTTCACTGGTGCCCCTGGCAAATATGTCGACTTGAAAGAGAATTGTACTAGTTTCAAGGTACTTTTTTCTTTACTTTTCTCTCCATGCTTTCCTTATGATCATACAGGAACTTATTTGGTTACTATCATTTCATTTTTTCTACTAGTGGTAGATTATCATCTTATGATATGCATTTTTAGTCTTTACTTTCAAAGCATTGCCTGCCAGATTTGTTTGGAAGTTGCTTATCTTTTGCTCCTTCACTAATCACTATCTATATGAACCTATTCCTTGGGAATTTTCTTTTCAATACTCGAAGCTTATTATAAGGGTTTAGAGTGTTTGTTTAAGCTAATGTTTATATACACTTCTTTCTGGAAGTGTTTGTTTAAATTAAGGTTTTTATAGGAAAACCGGTATTTTAGTTAAAAAATATAAAATAATCTGAAAATTATTTATTTGACTAACTTCTGAAAATAAATGTAATTTTTTTTACATGAGTTCACTTTAACTACCAGTTTGTTTCTATGCAATCCACAAACAATTTGACCGGATTTTCTCTATGAACTAATGCAGGGTGTGTTGGATGGCAAATACGATGACCTTTCAGAACAAGCATTTTACATGGTTGGTGGTATTGATGAAGTCATTGCAAAGGCAGAGAAGATTGCTAAGGAAAATGCGGCTTAA
Protein sequence

>MS.gene029508.t1

MASRRIVSSLIRSSLRPSLSKSSLTTSTSRISSSQSRASPYAYLLNRVTEYATAAAAAAPAPPQTPPAKKVPDGGGKITDEFTGKGAIGQVCQVIGAVVDVRFEEGLPPILTALEVLDHSTRLVLEVAQHMGEGVVRTIAMDATEGVVRGWRVLNTGSPISVPVGRCTLGRIMNVIGEPIDHKGEFKTEHFLPIHREAPTFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDQQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLSTDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPLILGDEHYETARGVQQVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVDLKENCTSFKGVLDGKYDDLSEQAFYMVGGIDEVIAKAEKIAKENAA